Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93198.t1 | KEH16910.1 | 74 | 365 | 77 | 2 | 51 | 414 | 890 | 1237 | 1.40E-145 | 526.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93198.t1 | A0A072TTQ0 | 74.0 | 365 | 77 | 2 | 51 | 414 | 890 | 1237 | 1.0e-145 | 526.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene93198 | 0.826177 | 3.13E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene93198 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene93198 | 0.820952 | 5.22E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene93198 | 0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene93198 | 0.818469 | 1.93E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene93198 | 0.824163 | 9.37E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene93198 | 0.813757 | 2.18E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene93198 | 0.802672 | 5.02E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene93198 | 0.832302 | 1.02E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene93198 | 0.806314 | 8.74E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene93198 | 0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene93198 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene93198 | 0.808854 | 2.52E-50 | -1.69E-46 |
| MS.gene050657 | MS.gene93198 | 0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene93198 | 0.848936 | 4.46E-60 | -1.69E-46 |
| MS.gene051279 | MS.gene93198 | 0.82227 | 2.59E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene93198 | 0.854536 | 1.15E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene93198 | 0.8613 | 1.13E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene93198 | 0.812721 | 3.68E-51 | -1.69E-46 |
| MS.gene051957 | MS.gene93198 | 0.824196 | 9.20E-54 | -1.69E-46 |
| MS.gene052020 | MS.gene93198 | 0.81558 | 8.60E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene93198 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene93198 | 0.810436 | 1.15E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene93198 | 0.836105 | 1.14E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene93198 | 0.802157 | 6.41E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene93198 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene93198 | 0.816771 | 4.66E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene93198 | 0.82662 | 2.46E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene93198 | 0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene053164 | MS.gene93198 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene93198 | 0.837049 | 6.54E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene93198 | 0.854814 | 9.58E-62 | -1.69E-46 |
| MS.gene053883 | MS.gene93198 | 0.806507 | 7.96E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene93198 | 0.800692 | 1.28E-48 | -1.69E-46 |
| MS.gene054236 | MS.gene93198 | 0.813507 | 2.47E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene93198 | 0.810379 | 1.19E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene93198 | 0.802307 | 5.97E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene93198 | 0.808069 | 3.71E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene93198 | 0.826877 | 2.13E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene93198 | 0.833553 | 4.99E-56 | -1.69E-46 |
| MS.gene054775 | MS.gene93198 | 0.841436 | 4.76E-58 | -1.69E-46 |
| MS.gene054991 | MS.gene93198 | 0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene93198 | 0.823181 | 1.59E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene93198 | 0.865161 | 7.22E-65 | -1.69E-46 |
| MS.gene055466 | MS.gene93198 | 0.881642 | 2.03E-70 | -1.69E-46 |
| MS.gene055468 | MS.gene93198 | 0.846456 | 2.15E-59 | -1.69E-46 |
| MS.gene055469 | MS.gene93198 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene93198 | 0.81313 | 2.99E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene93198 | -0.819565 | 1.09E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene93198 | 0.815553 | 8.72E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene93198 | 0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene93198 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene93198 | -0.800015 | 1.76E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene93198 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene93198 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene93198 | 0.821916 | 3.13E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene93198 | 0.803121 | 4.05E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene93198 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene93198 | 0.835034 | 2.12E-56 | -1.69E-46 |
| MS.gene057414 | MS.gene93198 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene93198 | 0.819248 | 1.28E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene93198 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene93198 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene93198 | 0.82541 | 4.76E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene93198 | 0.808779 | 2.62E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene93198 | 0.861235 | 1.18E-63 | -1.69E-46 |
| MS.gene058636 | MS.gene93198 | 0.804885 | 1.74E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene93198 | 0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene93198 | 0.836699 | 8.03E-57 | -1.69E-46 |
| MS.gene05954 | MS.gene93198 | 0.807814 | 4.21E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene93198 | 0.806952 | 6.41E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene93198 | 0.846329 | 2.33E-59 | -1.69E-46 |
| MS.gene059842 | MS.gene93198 | 0.810725 | 9.99E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene93198 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene93198 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene93198 | 0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene060519 | MS.gene93198 | 0.80819 | 3.50E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene93198 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene93198 | 0.822545 | 2.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93198.t1 | MTR_0069s0040 | 76.164 | 365 | 69 | 2 | 51 | 414 | 890 | 1237 | 1.23e-175 | 531 |
| MS.gene93198.t1 | MTR_0069s0040 | 24.749 | 299 | 156 | 7 | 95 | 331 | 795 | 1086 | 8.97e-14 | 73.9 |
| MS.gene93198.t1 | MTR_6g464050 | 73.699 | 365 | 79 | 1 | 50 | 414 | 1506 | 1853 | 2.76e-172 | 533 |
| MS.gene93198.t1 | MTR_6g464050 | 26.510 | 298 | 151 | 8 | 95 | 331 | 1412 | 1702 | 5.33e-17 | 84.3 |
| MS.gene93198.t1 | MTR_1g037130 | 73.352 | 364 | 80 | 1 | 51 | 414 | 890 | 1236 | 3.07e-168 | 521 |
| MS.gene93198.t1 | MTR_1g037130 | 75.796 | 314 | 59 | 1 | 96 | 409 | 1639 | 1935 | 6.38e-142 | 447 |
| MS.gene93198.t1 | MTR_1g037130 | 25.503 | 298 | 154 | 8 | 95 | 331 | 795 | 1085 | 1.96e-16 | 82.4 |
| MS.gene93198.t1 | MTR_8g059345 | 76.389 | 360 | 67 | 2 | 51 | 409 | 888 | 1230 | 9.86e-167 | 505 |
| MS.gene93198.t1 | MTR_8g059345 | 24.749 | 299 | 156 | 7 | 95 | 331 | 793 | 1084 | 3.67e-15 | 78.2 |
| MS.gene93198.t1 | MTR_0012s0150 | 74.521 | 365 | 75 | 2 | 51 | 414 | 639 | 986 | 2.72e-166 | 504 |
| MS.gene93198.t1 | MTR_0012s0150 | 23.438 | 384 | 209 | 10 | 95 | 404 | 544 | 916 | 1.96e-16 | 82.4 |
| MS.gene93198.t1 | MTR_0012s0150 | 32.530 | 166 | 104 | 4 | 176 | 335 | 1276 | 1439 | 8.95e-16 | 80.1 |
| MS.gene93198.t1 | MTR_1g037150 | 73.973 | 365 | 77 | 2 | 51 | 414 | 878 | 1225 | 8.93e-166 | 512 |
| MS.gene93198.t1 | MTR_1g037150 | 31.405 | 242 | 138 | 5 | 176 | 409 | 1515 | 1736 | 2.04e-26 | 112 |
| MS.gene93198.t1 | MTR_2g089975 | 75.068 | 365 | 73 | 2 | 50 | 413 | 889 | 1236 | 9.24e-165 | 513 |
| MS.gene93198.t1 | MTR_2g089975 | 32.917 | 240 | 133 | 5 | 176 | 407 | 2566 | 2785 | 4.20e-28 | 117 |
| MS.gene93198.t1 | MTR_2g089975 | 31.174 | 247 | 142 | 5 | 176 | 414 | 1527 | 1753 | 3.19e-26 | 112 |
| MS.gene93198.t1 | MTR_2g089975 | 30.041 | 243 | 140 | 6 | 176 | 409 | 2047 | 2268 | 2.91e-21 | 97.4 |
| MS.gene93198.t1 | MTR_2g089975 | 26.846 | 298 | 151 | 6 | 95 | 331 | 795 | 1086 | 1.13e-17 | 86.3 |
| MS.gene93198.t1 | MTR_2g089975 | 26.792 | 265 | 166 | 11 | 53 | 302 | 2013 | 2264 | 5.54e-11 | 65.5 |
| MS.gene93198.t1 | MTR_0006s0240 | 73.973 | 365 | 77 | 2 | 51 | 414 | 857 | 1204 | 3.14e-164 | 511 |
| MS.gene93198.t1 | MTR_0006s0240 | 29.193 | 322 | 199 | 6 | 94 | 407 | 1856 | 2156 | 4.07e-27 | 114 |
| MS.gene93198.t1 | MTR_0006s0240 | 31.405 | 242 | 138 | 5 | 176 | 409 | 1494 | 1715 | 2.14e-26 | 112 |
| MS.gene93198.t1 | MTR_1g051585 | 74.521 | 365 | 75 | 2 | 51 | 414 | 890 | 1237 | 4.13e-163 | 504 |
| MS.gene93198.t1 | MTR_1g051585 | 31.301 | 246 | 141 | 5 | 176 | 413 | 1512 | 1737 | 3.29e-25 | 108 |
| MS.gene93198.t1 | MTR_1g051585 | 25.153 | 326 | 171 | 10 | 95 | 358 | 795 | 1109 | 1.37e-16 | 82.8 |
| MS.gene93198.t1 | MTR_1g051585 | 24.121 | 398 | 202 | 14 | 99 | 407 | 1605 | 1991 | 2.54e-13 | 72.8 |
| MS.gene93198.t1 | MTR_0068s0080 | 72.404 | 366 | 83 | 2 | 50 | 414 | 886 | 1234 | 5.86e-163 | 501 |
| MS.gene93198.t1 | MTR_0068s0080 | 24.847 | 326 | 172 | 9 | 95 | 358 | 792 | 1106 | 4.07e-17 | 84.3 |
| MS.gene93198.t1 | MTR_0068s0080 | 70.667 | 375 | 83 | 3 | 50 | 414 | 886 | 1243 | 6.69e-162 | 494 |
| MS.gene93198.t1 | MTR_0068s0080 | 24.179 | 335 | 172 | 9 | 95 | 358 | 792 | 1115 | 2.14e-15 | 79.0 |
| MS.gene93198.t1 | MTR_0006s0230 | 73.901 | 364 | 78 | 1 | 51 | 414 | 861 | 1207 | 3.21e-161 | 501 |
| MS.gene93198.t1 | MTR_0006s0230 | 75.796 | 314 | 59 | 1 | 96 | 409 | 1610 | 1906 | 6.00e-142 | 447 |
| MS.gene93198.t1 | MTR_1g036800 | 72.329 | 365 | 83 | 2 | 50 | 413 | 887 | 1234 | 5.78e-161 | 492 |
| MS.gene93198.t1 | MTR_1g036800 | 25.767 | 326 | 169 | 9 | 95 | 358 | 793 | 1107 | 7.17e-17 | 83.6 |
| MS.gene93198.t1 | MTR_6g463150 | 74.515 | 361 | 70 | 4 | 51 | 409 | 888 | 1228 | 1.06e-160 | 496 |
| MS.gene93198.t1 | MTR_6g463150 | 29.960 | 247 | 145 | 5 | 176 | 414 | 1519 | 1745 | 2.19e-24 | 106 |
| MS.gene93198.t1 | MTR_6g463150 | 23.490 | 298 | 159 | 6 | 95 | 331 | 793 | 1082 | 2.30e-14 | 75.9 |
| MS.gene93198.t1 | MTR_1g036750 | 73.901 | 364 | 78 | 1 | 51 | 414 | 861 | 1207 | 1.66e-160 | 500 |
| MS.gene93198.t1 | MTR_1g036750 | 29.102 | 323 | 198 | 7 | 94 | 407 | 1936 | 2236 | 4.01e-27 | 115 |
| MS.gene93198.t1 | MTR_1g036750 | 30.612 | 245 | 142 | 5 | 177 | 413 | 1498 | 1722 | 2.30e-24 | 106 |
| MS.gene93198.t1 | MTR_1g041550 | 70.411 | 365 | 76 | 3 | 51 | 414 | 891 | 1224 | 4.93e-148 | 465 |
| MS.gene93198.t1 | MTR_1g041550 | 33.333 | 240 | 132 | 5 | 176 | 407 | 2034 | 2253 | 7.83e-28 | 117 |
| MS.gene93198.t1 | MTR_1g041550 | 30.081 | 246 | 144 | 5 | 176 | 413 | 1514 | 1739 | 2.94e-24 | 106 |
| MS.gene93198.t1 | MTR_1g037010 | 71.429 | 343 | 81 | 1 | 72 | 414 | 837 | 1162 | 2.78e-146 | 458 |
| MS.gene93198.t1 | MTR_1g037010 | 33.891 | 239 | 129 | 6 | 177 | 407 | 1453 | 1670 | 8.78e-28 | 117 |
| MS.gene93198.t1 | MTR_1g044020 | 65.460 | 359 | 107 | 1 | 51 | 409 | 639 | 980 | 3.01e-145 | 457 |
| MS.gene93198.t1 | MTR_1g044020 | 28.000 | 400 | 235 | 13 | 25 | 409 | 1137 | 1498 | 2.84e-28 | 118 |
| MS.gene93198.t1 | MTR_1g044020 | 30.579 | 242 | 140 | 5 | 176 | 409 | 1802 | 2023 | 4.73e-26 | 111 |
| MS.gene93198.t1 | MTR_1g044020 | 32.917 | 240 | 132 | 8 | 176 | 407 | 2304 | 2522 | 7.71e-22 | 99.0 |
| MS.gene93198.t1 | MTR_1g044020 | 26.136 | 352 | 211 | 14 | 90 | 415 | 2301 | 2629 | 2.01e-14 | 76.3 |
| MS.gene93198.t1 | MTR_1g044020 | 28.319 | 226 | 144 | 8 | 90 | 302 | 1799 | 2019 | 2.85e-11 | 66.2 |
| MS.gene93198.t1 | MTR_1g036520 | 66.852 | 359 | 70 | 2 | 51 | 409 | 469 | 778 | 2.67e-143 | 434 |
| MS.gene93198.t1 | MTR_1g442750 | 66.027 | 365 | 76 | 1 | 50 | 414 | 855 | 1171 | 1.92e-141 | 446 |
| MS.gene93198.t1 | MTR_1g442750 | 28.496 | 379 | 197 | 9 | 76 | 407 | 1735 | 2086 | 2.90e-27 | 115 |
| MS.gene93198.t1 | MTR_1g442750 | 28.535 | 389 | 227 | 11 | 53 | 414 | 1323 | 1687 | 2.00e-24 | 106 |
| MS.gene93198.t1 | MTR_0006s0160 | 70.462 | 325 | 79 | 1 | 90 | 414 | 3 | 310 | 2.16e-138 | 418 |
| MS.gene93198.t1 | MTR_0006s0160 | 27.604 | 384 | 235 | 9 | 53 | 413 | 452 | 815 | 4.25e-24 | 105 |
| MS.gene93198.t1 | MTR_0006s0080 | 71.250 | 320 | 75 | 1 | 95 | 414 | 758 | 1060 | 2.86e-133 | 421 |
| MS.gene93198.t1 | MTR_0006s0080 | 29.534 | 386 | 213 | 11 | 53 | 407 | 1212 | 1569 | 6.97e-28 | 117 |
| MS.gene93198.t1 | MTR_0006s0300 | 70.307 | 293 | 70 | 1 | 122 | 414 | 1 | 276 | 9.10e-133 | 394 |
| MS.gene93198.t1 | MTR_0406s0030 | 67.133 | 286 | 63 | 3 | 51 | 334 | 815 | 1071 | 2.20e-107 | 341 |
| MS.gene93198.t1 | MTR_1g050402 | 52.066 | 363 | 151 | 4 | 51 | 409 | 908 | 1251 | 2.06e-97 | 319 |
| MS.gene93198.t1 | MTR_1g050402 | 28.980 | 245 | 125 | 6 | 171 | 407 | 1542 | 1745 | 1.93e-15 | 79.3 |
| MS.gene93198.t1 | MTR_1g037250 | 50.400 | 375 | 113 | 4 | 96 | 414 | 802 | 1159 | 2.36e-97 | 319 |
| MS.gene93198.t1 | MTR_1g037250 | 37.091 | 275 | 147 | 8 | 51 | 317 | 894 | 1150 | 4.04e-36 | 141 |
| MS.gene93198.t1 | MTR_1g037250 | 33.473 | 239 | 131 | 5 | 177 | 407 | 1371 | 1589 | 1.10e-27 | 116 |
| MS.gene93198.t1 | MTR_4g025470 | 46.814 | 361 | 164 | 6 | 51 | 409 | 871 | 1205 | 2.48e-90 | 299 |
| MS.gene93198.t1 | MTR_4g025430 | 46.703 | 364 | 167 | 6 | 51 | 409 | 831 | 1172 | 9.97e-88 | 291 |
| MS.gene93198.t1 | MTR_1g044095 | 62.245 | 196 | 69 | 1 | 145 | 335 | 53 | 248 | 1.78e-68 | 235 |
| MS.gene93198.t1 | MTR_1g044095 | 25.339 | 442 | 218 | 16 | 51 | 394 | 42 | 469 | 1.88e-14 | 75.9 |
| MS.gene93198.t1 | MTR_1g044095 | 30.081 | 246 | 137 | 8 | 168 | 398 | 871 | 1096 | 5.00e-14 | 74.7 |
| MS.gene93198.t1 | MTR_2g071890 | 34.383 | 381 | 203 | 10 | 51 | 408 | 868 | 1224 | 1.14e-51 | 187 |
| MS.gene93198.t1 | MTR_2g071890 | 21.728 | 405 | 229 | 10 | 70 | 404 | 751 | 1137 | 8.35e-12 | 67.8 |
| MS.gene93198.t1 | MTR_2g072020 | 32.982 | 379 | 203 | 8 | 51 | 409 | 863 | 1210 | 1.92e-46 | 172 |
| MS.gene93198.t1 | MTR_2g072820 | 32.546 | 381 | 213 | 8 | 51 | 408 | 860 | 1219 | 2.70e-46 | 171 |
| MS.gene93198.t1 | MTR_2g072110 | 33.333 | 378 | 207 | 10 | 53 | 407 | 893 | 1248 | 3.97e-46 | 171 |
| MS.gene93198.t1 | MTR_2g072110 | 26.912 | 353 | 207 | 10 | 99 | 407 | 1122 | 1467 | 5.64e-17 | 84.0 |
| MS.gene93198.t1 | MTR_2g072110 | 33.333 | 378 | 207 | 10 | 53 | 407 | 893 | 1248 | 4.61e-46 | 171 |
| MS.gene93198.t1 | MTR_2g072110 | 30.964 | 197 | 120 | 5 | 220 | 407 | 1317 | 1506 | 1.59e-12 | 70.1 |
| MS.gene93198.t1 | MTR_2g072150 | 31.771 | 384 | 210 | 10 | 51 | 414 | 895 | 1246 | 2.90e-45 | 168 |
| MS.gene93198.t1 | MTR_2g071860 | 33.422 | 374 | 203 | 10 | 51 | 407 | 433 | 777 | 1.61e-44 | 166 |
| MS.gene93198.t1 | MTR_2g071860 | 26.786 | 336 | 192 | 10 | 95 | 407 | 732 | 1036 | 9.42e-15 | 77.0 |
| MS.gene93198.t1 | MTR_2g071960 | 32.277 | 347 | 188 | 7 | 88 | 408 | 766 | 1091 | 4.16e-43 | 162 |
| MS.gene93198.t1 | MTR_2g071850 | 32.277 | 347 | 188 | 7 | 88 | 408 | 896 | 1221 | 4.65e-43 | 162 |
| MS.gene93198.t1 | MTR_2g072090 | 32.277 | 347 | 188 | 7 | 88 | 408 | 896 | 1221 | 1.09e-42 | 160 |
| MS.gene93198.t1 | MTR_2g071870 | 32.277 | 347 | 188 | 7 | 88 | 408 | 896 | 1221 | 1.26e-42 | 160 |
| MS.gene93198.t1 | MTR_2g072030 | 32.637 | 383 | 210 | 11 | 51 | 408 | 897 | 1256 | 4.65e-41 | 156 |
| MS.gene93198.t1 | MTR_2g071980 | 32.831 | 332 | 187 | 7 | 88 | 408 | 895 | 1201 | 1.25e-40 | 154 |
| MS.gene93198.t1 | MTR_8g028500 | 28.871 | 381 | 219 | 11 | 51 | 407 | 861 | 1213 | 5.62e-40 | 153 |
| MS.gene93198.t1 | MTR_8g028500 | 29.915 | 234 | 139 | 4 | 176 | 401 | 1503 | 1719 | 5.92e-21 | 96.3 |
| MS.gene93198.t1 | MTR_8g028500 | 30.738 | 244 | 151 | 5 | 186 | 414 | 2024 | 2264 | 1.07e-20 | 95.5 |
| MS.gene93198.t1 | MTR_8g028500 | 31.507 | 146 | 89 | 4 | 111 | 246 | 1522 | 1666 | 9.69e-11 | 64.7 |
| MS.gene93198.t1 | MTR_3g013790 | 31.733 | 375 | 210 | 10 | 51 | 407 | 887 | 1233 | 9.69e-40 | 152 |
| MS.gene93198.t1 | MTR_2g072080 | 30.352 | 369 | 183 | 10 | 51 | 407 | 864 | 1170 | 6.23e-32 | 129 |
| MS.gene93198.t1 | MTR_2g072080 | 27.857 | 280 | 173 | 8 | 151 | 407 | 1156 | 1429 | 1.87e-14 | 76.3 |
| MS.gene93198.t1 | MTR_6g464030 | 30.341 | 323 | 194 | 7 | 94 | 407 | 295 | 595 | 1.01e-29 | 122 |
| MS.gene93198.t1 | MTR_6g464030 | 27.500 | 200 | 130 | 8 | 70 | 257 | 351 | 547 | 3.67e-11 | 65.5 |
| MS.gene93198.t1 | MTR_1g051625 | 29.129 | 333 | 183 | 8 | 95 | 407 | 449 | 748 | 3.16e-28 | 117 |
| MS.gene93198.t1 | MTR_1g051625 | 31.276 | 243 | 141 | 4 | 178 | 414 | 11 | 233 | 3.29e-25 | 108 |
| MS.gene93198.t1 | MTR_0006s0250 | 31.950 | 241 | 136 | 5 | 177 | 409 | 13 | 233 | 1.87e-27 | 114 |
| MS.gene93198.t1 | MTR_0006s0250 | 26.331 | 338 | 217 | 10 | 91 | 407 | 94 | 420 | 5.52e-15 | 77.0 |
| MS.gene93198.t1 | MTR_0006s0250 | 28.125 | 224 | 143 | 9 | 92 | 302 | 11 | 229 | 8.28e-13 | 70.1 |
| MS.gene93198.t1 | MTR_0460s0010 | 27.094 | 406 | 243 | 12 | 35 | 413 | 362 | 741 | 3.83e-27 | 114 |
| MS.gene93198.t1 | MTR_0460s0010 | 31.557 | 244 | 139 | 5 | 178 | 413 | 1 | 224 | 1.25e-25 | 109 |
| MS.gene93198.t1 | MTR_0460s0010 | 23.869 | 398 | 203 | 13 | 99 | 407 | 92 | 478 | 9.03e-13 | 70.5 |
| MS.gene93198.t1 | MTR_0069s0080 | 27.247 | 356 | 177 | 7 | 121 | 414 | 919 | 1254 | 3.96e-27 | 114 |
| MS.gene93198.t1 | MTR_0069s0080 | 29.344 | 259 | 154 | 6 | 165 | 414 | 3 | 241 | 1.94e-23 | 103 |
| MS.gene93198.t1 | MTR_0069s0080 | 30.000 | 240 | 140 | 5 | 176 | 407 | 537 | 756 | 2.28e-23 | 103 |
| MS.gene93198.t1 | MTR_8g059275 | 28.443 | 334 | 186 | 8 | 94 | 407 | 1375 | 1675 | 5.67e-27 | 114 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 463 | 770 | 2.75e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 28.049 | 328 | 181 | 7 | 98 | 414 | 879 | 1162 | 2.87e-25 | 109 |
| MS.gene93198.t1 | MTR_8g059275 | 29.435 | 248 | 147 | 5 | 175 | 414 | 23 | 250 | 1.32e-23 | 104 |
| MS.gene93198.t1 | MTR_8g059275 | 27.055 | 292 | 190 | 13 | 70 | 342 | 519 | 806 | 1.41e-13 | 73.6 |
| MS.gene93198.t1 | MTR_8g059275 | 28.443 | 334 | 186 | 8 | 94 | 407 | 1507 | 1807 | 6.18e-27 | 114 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 463 | 770 | 2.96e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 983 | 1290 | 2.96e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 30.645 | 248 | 144 | 6 | 175 | 414 | 23 | 250 | 1.37e-23 | 104 |
| MS.gene93198.t1 | MTR_8g059275 | 26.644 | 289 | 190 | 12 | 70 | 340 | 1039 | 1323 | 1.44e-13 | 73.6 |
| MS.gene93198.t1 | MTR_8g059275 | 30.108 | 186 | 118 | 6 | 70 | 243 | 519 | 704 | 1.60e-13 | 73.2 |
| MS.gene93198.t1 | MTR_8g059275 | 28.443 | 334 | 186 | 8 | 94 | 407 | 1503 | 1803 | 6.41e-27 | 114 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 463 | 770 | 3.19e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 983 | 1290 | 3.19e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 30.645 | 248 | 144 | 6 | 175 | 414 | 23 | 250 | 1.50e-23 | 103 |
| MS.gene93198.t1 | MTR_8g059275 | 30.108 | 186 | 118 | 6 | 70 | 243 | 519 | 704 | 1.63e-13 | 73.2 |
| MS.gene93198.t1 | MTR_8g059275 | 30.108 | 186 | 118 | 6 | 70 | 243 | 1039 | 1224 | 1.63e-13 | 73.2 |
| MS.gene93198.t1 | MTR_8g059275 | 28.443 | 334 | 186 | 8 | 94 | 407 | 1895 | 2195 | 6.53e-27 | 114 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 463 | 770 | 3.31e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 28.182 | 330 | 206 | 7 | 94 | 414 | 1375 | 1682 | 3.31e-26 | 112 |
| MS.gene93198.t1 | MTR_8g059275 | 28.049 | 328 | 181 | 7 | 98 | 414 | 879 | 1162 | 3.58e-25 | 108 |
| MS.gene93198.t1 | MTR_8g059275 | 29.435 | 248 | 147 | 5 | 175 | 414 | 23 | 250 | 1.58e-23 | 103 |
| MS.gene93198.t1 | MTR_8g059275 | 30.108 | 186 | 118 | 6 | 70 | 243 | 519 | 704 | 1.51e-13 | 73.6 |
| MS.gene93198.t1 | MTR_8g059275 | 30.108 | 186 | 118 | 6 | 70 | 243 | 1431 | 1616 | 1.51e-13 | 73.6 |
| MS.gene93198.t1 | MTR_8g028520 | 28.097 | 331 | 171 | 7 | 87 | 409 | 940 | 1211 | 6.63e-27 | 114 |
| MS.gene93198.t1 | MTR_8g028520 | 30.952 | 210 | 119 | 3 | 192 | 394 | 1516 | 1706 | 2.33e-20 | 94.4 |
| MS.gene93198.t1 | MTR_8g028520 | 25.505 | 396 | 188 | 12 | 99 | 407 | 1592 | 1967 | 3.21e-14 | 75.5 |
| MS.gene93198.t1 | MTR_1g036820 | 30.189 | 265 | 155 | 6 | 160 | 414 | 6 | 250 | 3.84e-26 | 111 |
| MS.gene93198.t1 | MTR_1g036820 | 28.761 | 226 | 137 | 9 | 93 | 302 | 24 | 241 | 3.79e-12 | 68.6 |
| MS.gene93198.t1 | MTR_1g036820 | 25.382 | 327 | 215 | 9 | 99 | 407 | 117 | 432 | 5.49e-11 | 65.1 |
| MS.gene93198.t1 | MTR_4g024950 | 46.400 | 125 | 38 | 2 | 95 | 219 | 27 | 122 | 4.23e-24 | 98.2 |
| MS.gene93198.t1 | MTR_0783s0010 | 63.380 | 71 | 26 | 0 | 344 | 414 | 1 | 71 | 2.37e-23 | 100 |
| MS.gene93198.t1 | MTR_1g036880 | 29.388 | 245 | 145 | 5 | 178 | 414 | 38 | 262 | 4.27e-23 | 101 |
| MS.gene93198.t1 | MTR_1g036880 | 25.836 | 329 | 215 | 10 | 99 | 407 | 129 | 448 | 1.44e-11 | 66.6 |
| MS.gene93198.t1 | MTR_1g036880 | 25.490 | 306 | 186 | 12 | 90 | 379 | 33 | 312 | 1.51e-11 | 66.2 |
| MS.gene93198.t1 | MTR_0602s0010 | 41.985 | 131 | 55 | 2 | 280 | 409 | 2 | 112 | 6.28e-23 | 99.4 |
| MS.gene93198.t1 | MTR_8g059385 | 29.268 | 246 | 146 | 5 | 177 | 414 | 9 | 234 | 1.11e-22 | 99.0 |
| MS.gene93198.t1 | MTR_8g059385 | 27.928 | 222 | 142 | 8 | 94 | 302 | 9 | 225 | 7.14e-12 | 67.0 |
| MS.gene93198.t1 | MTR_8g059325 | 30.317 | 221 | 126 | 5 | 178 | 390 | 1 | 201 | 1.21e-20 | 89.7 |
| MS.gene93198.t1 | MTR_8g059325 | 28.931 | 159 | 103 | 5 | 95 | 243 | 1 | 159 | 5.50e-11 | 62.0 |
| MS.gene93198.t1 | MTR_7g088650 | 26.757 | 370 | 202 | 14 | 90 | 407 | 582 | 934 | 2.41e-20 | 94.4 |
| MS.gene93198.t1 | MTR_7g088650 | 24.784 | 347 | 204 | 11 | 56 | 386 | 859 | 1164 | 4.70e-12 | 68.6 |
| MS.gene93198.t1 | MTR_1g050395 | 31.020 | 245 | 141 | 6 | 171 | 407 | 219 | 443 | 5.14e-20 | 92.8 |
| MS.gene93198.t1 | MTR_0006s0290 | 32.018 | 228 | 134 | 8 | 170 | 378 | 6 | 231 | 1.64e-19 | 90.1 |
| MS.gene93198.t1 | MTR_0006s0290 | 25.613 | 367 | 217 | 12 | 90 | 407 | 9 | 368 | 9.31e-15 | 75.9 |
| MS.gene93198.t1 | MTR_1g050230 | 34.395 | 157 | 95 | 3 | 176 | 324 | 249 | 405 | 6.19e-17 | 82.8 |
| MS.gene93198.t1 | MTR_1g006975 | 25.068 | 367 | 217 | 14 | 90 | 407 | 924 | 1281 | 1.59e-15 | 79.7 |
| MS.gene93198.t1 | MTR_7g088640 | 24.599 | 374 | 216 | 12 | 85 | 407 | 917 | 1275 | 4.70e-15 | 78.2 |
| MS.gene93198.t1 | MTR_2g071900 | 42.353 | 85 | 45 | 2 | 88 | 169 | 892 | 975 | 7.13e-14 | 74.3 |
| MS.gene93198.t1 | MTR_3g013790 | 35.772 | 123 | 69 | 4 | 51 | 170 | 887 | 1002 | 3.87e-12 | 68.9 |
| MS.gene93198.t1 | MTR_2g071940 | 40.741 | 81 | 44 | 2 | 88 | 165 | 896 | 975 | 7.56e-12 | 67.8 |
| MS.gene93198.t1 | MTR_3g466710 | 25.359 | 209 | 131 | 5 | 132 | 338 | 750 | 935 | 2.26e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGGTTGCATTTCCTAATT+TGG | 0.120811 | 1.3:+16035829 | MS.gene93198:intron |
| TGAGAAGTGAGCTCAATTTA+AGG | 0.206782 | 1.3:-16035856 | None:intergenic |
| TCCTTTCCCTGTTGGGCCTT+GGG | 0.218700 | 1.3:+16035067 | MS.gene93198:CDS |
| TTCCTTTCCCTGTTGGGCCT+TGG | 0.239699 | 1.3:+16035066 | MS.gene93198:CDS |
| TTCTCAATTTGAATAAAGTT+TGG | 0.241150 | 1.3:+16035873 | MS.gene93198:CDS |
| TTCTTTGACTTTAGAACATT+TGG | 0.258952 | 1.3:+16035166 | MS.gene93198:CDS |
| AATTTAAGGGTATCCAAATT+AGG | 0.266502 | 1.3:-16035842 | None:intergenic |
| TTGATAGAGGTTATTATAGT+TGG | 0.271861 | 1.3:+16036415 | MS.gene93198:CDS |
| GAAAGAGCCCAAGGCCCAAC+AGG | 0.283816 | 1.3:-16035074 | None:intergenic |
| AATAAGTAATTGCTCTTTGA+TGG | 0.285525 | 1.3:+16036015 | MS.gene93198:CDS |
| GAAAGTCATATTGAAGGATA+TGG | 0.318990 | 1.3:+16036183 | MS.gene93198:CDS |
| AAACTCAATGGTTTCTATAC+TGG | 0.349613 | 1.3:+16036760 | MS.gene93198:CDS |
| TCTCAATTTGAATAAAGTTT+GGG | 0.352745 | 1.3:+16035874 | MS.gene93198:CDS |
| ATTCCTGCTTCCTTTCCTAT+TGG | 0.353371 | 1.3:+16035126 | MS.gene93198:CDS |
| GTATAGAAACCATTGAGTTT+AGG | 0.370843 | 1.3:-16036757 | None:intergenic |
| GGTGCTTTCCTTTCCCTGTT+GGG | 0.371268 | 1.3:+16035060 | MS.gene93198:CDS |
| CGGTGCTTTCCTTTCCCTGT+TGG | 0.385266 | 1.3:+16035059 | MS.gene93198:CDS |
| CTCTGCTGTGTCCATCTTTG+AGG | 0.389520 | 1.3:+16036791 | MS.gene93198:CDS |
| TGAAAACTAATAATTCCTTC+AGG | 0.392948 | 1.3:-16036472 | None:intergenic |
| TGGACAACTTGAAGACAATA+TGG | 0.395652 | 1.3:+16036203 | MS.gene93198:CDS |
| GGAAAGGAAAGCACCGGCTT+GGG | 0.396589 | 1.3:-16035052 | None:intergenic |
| TTTCCTTTCACACCTTCAGC+TGG | 0.397632 | 1.3:+16035093 | MS.gene93198:CDS |
| TTTATCGCATCTTAGAAGTA+AGG | 0.400151 | 1.3:+16035217 | MS.gene93198:CDS |
| GTATTTATTCCCCTCTACTT+TGG | 0.414400 | 1.3:+16035961 | MS.gene93198:CDS |
| GAGAAGTGAGCTCAATTTAA+GGG | 0.416032 | 1.3:-16035855 | None:intergenic |
| TCTCACATGTTTCTTGCGCC+TGG | 0.432934 | 1.3:-16036859 | None:intergenic |
| CATGATACAGTGGTGCCAAT+AGG | 0.448347 | 1.3:-16035141 | None:intergenic |
| TACTTATTTCAAGATGTTTG+AGG | 0.457049 | 1.3:-16036000 | None:intergenic |
| CATAAATGATTGTCCAAGCT+TGG | 0.460757 | 1.3:+16036513 | MS.gene93198:CDS |
| GGGAAAGGAAAGCACCGGCT+TGG | 0.466171 | 1.3:-16035053 | None:intergenic |
| ATATAATGAGCTTGAGAAGT+TGG | 0.474500 | 1.3:+16036312 | MS.gene93198:CDS |
| GCCCAAGGCCCAACAGGGAA+AGG | 0.477287 | 1.3:-16035068 | None:intergenic |
| ATTAGAGAAAGTCATATTGA+AGG | 0.481604 | 1.3:+16036177 | MS.gene93198:CDS |
| ATGAATTTGTTCAGAACTCC+AGG | 0.482030 | 1.3:+16036841 | MS.gene93198:CDS |
| ACACTATATATCCTCAAAGA+TGG | 0.489706 | 1.3:-16036802 | None:intergenic |
| GGATACATCACATTTGATAG+AGG | 0.494964 | 1.3:+16036402 | MS.gene93198:CDS |
| GGTAATAGATGCTCCAAGCT+TGG | 0.497995 | 1.3:-16036526 | None:intergenic |
| TGGCACTTACCTAAACTCAA+TGG | 0.512527 | 1.3:+16036748 | MS.gene93198:CDS |
| GACTATGTGGGAGTCCCACT+TGG | 0.526785 | 1.3:-16035024 | None:intergenic |
| GGCTTGGGCACGTGACTATG+TGG | 0.532471 | 1.3:-16035037 | None:intergenic |
| CACTCGTTGCTCACATCTCA+AGG | 0.534661 | 1.3:+16036561 | MS.gene93198:CDS |
| AGAAGTAAGGAAAAGTATCA+AGG | 0.536713 | 1.3:+16035230 | MS.gene93198:CDS |
| AAACTTTCAACCAAAGTAGA+GGG | 0.546650 | 1.3:-16035971 | None:intergenic |
| AGATGAGAGAAACAATGCAT+TGG | 0.550935 | 1.3:+16036054 | MS.gene93198:CDS |
| CAACTTGACTAGCTTGATTG+TGG | 0.552919 | 1.3:+16035919 | MS.gene93198:CDS |
| CAACAGGGAAAGGAAAGCAC+CGG | 0.557057 | 1.3:-16035058 | None:intergenic |
| GAGAAACAATGCATTGGAAG+AGG | 0.561565 | 1.3:+16036060 | MS.gene93198:CDS |
| CAACGAGTGGCTACAGAGAG+TGG | 0.570766 | 1.3:-16036547 | None:intergenic |
| TAATGAGCTTGAGAAGTTGG+AGG | 0.573132 | 1.3:+16036315 | MS.gene93198:CDS |
| AAAACTTTCAACCAAAGTAG+AGG | 0.580217 | 1.3:-16035972 | None:intergenic |
| AAGTAATTGCTCTTTGATGG+AGG | 0.591904 | 1.3:+16036018 | MS.gene93198:CDS |
| CAATGTTAATTGATTCCAAG+TGG | 0.593501 | 1.3:+16035009 | None:intergenic |
| TACAGTGGTGCCAATAGGAA+AGG | 0.595052 | 1.3:-16035136 | None:intergenic |
| AAAGAGCCCAAGGCCCAACA+GGG | 0.597799 | 1.3:-16035073 | None:intergenic |
| ACATAGTCACGTGCCCAAGC+CGG | 0.598815 | 1.3:+16035039 | MS.gene93198:CDS |
| GTGCCAATAGGAAAGGAAGC+AGG | 0.605207 | 1.3:-16035129 | None:intergenic |
| AAGTGATTAAACTCAAACAT+GGG | 0.611565 | 1.3:-16036709 | None:intergenic |
| TGTGCAGGAAATTGTTGCAG+AGG | 0.612468 | 1.3:+16036660 | MS.gene93198:CDS |
| GAGCCAGCTGAAGGTGTGAA+AGG | 0.624436 | 1.3:-16035096 | None:intergenic |
| TAAGTGATTAAACTCAAACA+TGG | 0.624919 | 1.3:-16036710 | None:intergenic |
| CAATGAAAATAACAGTGTAG+AGG | 0.625431 | 1.3:+16036381 | MS.gene93198:CDS |
| AATGTTAATTGATTCCAAGT+GGG | 0.626717 | 1.3:+16035010 | None:intergenic |
| AGCTTGATTGTGGATAATTG+TGG | 0.631941 | 1.3:+16035929 | MS.gene93198:CDS |
| TTGATTGTGGATAATTGTGG+TGG | 0.634978 | 1.3:+16035932 | MS.gene93198:CDS |
| CAATTGCAAGAAAATTGTGG+TGG | 0.640890 | 1.3:+16036264 | MS.gene93198:CDS |
| GCTTGGGCACGTGACTATGT+GGG | 0.641779 | 1.3:-16035036 | None:intergenic |
| GAACAATTGCAAGAAAATTG+TGG | 0.643327 | 1.3:+16036261 | MS.gene93198:CDS |
| GTGTGAAAGGAAAGAGCCCA+AGG | 0.644821 | 1.3:-16035083 | None:intergenic |
| AAGATGCGATAAATAATCAG+AGG | 0.646166 | 1.3:-16035207 | None:intergenic |
| CTTGAGATGTGAGCAACGAG+TGG | 0.656593 | 1.3:-16036560 | None:intergenic |
| TCAAAGAACGCATGATACAG+TGG | 0.659198 | 1.3:-16035151 | None:intergenic |
| AACTTTCAACCAAAGTAGAG+GGG | 0.668136 | 1.3:-16035970 | None:intergenic |
| ATATGGAGTAGAGATCCTGA+AGG | 0.673742 | 1.3:+16036457 | MS.gene93198:CDS |
| ATTGATGCTGAGCCAGCTGA+AGG | 0.675495 | 1.3:-16035105 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAATAATTTAAAT+TGG | - | chr1.3:16036112-16036131 | None:intergenic | 0.0% |
| !! | AAATTAATTAATGAATGAAT+CGG | + | chr1.3:16035365-16035384 | MS.gene93198:intron | 10.0% |
| !! | TATAAAAAATTGTGAAAACA+TGG | + | chr1.3:16036591-16036610 | MS.gene93198:CDS | 15.0% |
| !!! | ACTTAAGTATTTTATTTCTT+TGG | + | chr1.3:16036728-16036747 | MS.gene93198:CDS | 15.0% |
| !!! | TTATTTTTTATTTGTACTGA+TGG | + | chr1.3:16036119-16036138 | MS.gene93198:intron | 15.0% |
| !!! | TTTAAGATTTATATTCCTAA+TGG | - | chr1.3:16035716-16035735 | None:intergenic | 15.0% |
| !! | AGGTATAGTAATTCTATTAT+CGG | + | chr1.3:16036080-16036099 | MS.gene93198:intron | 20.0% |
| !! | TCTAACTACAAAACTATAAT+AGG | + | chr1.3:16035482-16035501 | MS.gene93198:intron | 20.0% |
| !! | TCTCAATTTGAATAAAGTTT+GGG | + | chr1.3:16035874-16035893 | MS.gene93198:CDS | 20.0% |
| !! | TTCTCAATTTGAATAAAGTT+TGG | + | chr1.3:16035873-16035892 | MS.gene93198:CDS | 20.0% |
| !! | TTCTTTCTAAATAAGTAGAA+AGG | + | chr1.3:16035522-16035541 | MS.gene93198:intron | 20.0% |
| !!! | ACATCTTCAATGTTTTAAAT+TGG | - | chr1.3:16036234-16036253 | None:intergenic | 20.0% |
| !!! | ATGTTAGTTTGTTTTTATGT+AGG | + | chr1.3:16035811-16035830 | MS.gene93198:intron | 20.0% |
| !!! | TATTATTGTCATTTCTGAAA+TGG | - | chr1.3:16035568-16035587 | None:intergenic | 20.0% |
| ! | AAAAAATTGTGAAAACATGG+AGG | + | chr1.3:16036594-16036613 | MS.gene93198:CDS | 25.0% |
| ! | AAAAAATTGTGAAAATGTGC+AGG | + | chr1.3:16036645-16036664 | MS.gene93198:CDS | 25.0% |
| ! | AAGTGATTAAACTCAAACAT+GGG | - | chr1.3:16036712-16036731 | None:intergenic | 25.0% |
| ! | AATAAGTAATTGCTCTTTGA+TGG | + | chr1.3:16036015-16036034 | MS.gene93198:CDS | 25.0% |
| ! | ATACAGTACTAAATTCCATT+AGG | + | chr1.3:16035698-16035717 | MS.gene93198:intron | 25.0% |
| ! | ATTAGAGAAAGTCATATTGA+AGG | + | chr1.3:16036177-16036196 | MS.gene93198:CDS | 25.0% |
| ! | GGTATAGTAATTCTATTATC+GGG | + | chr1.3:16036081-16036100 | MS.gene93198:intron | 25.0% |
| ! | TAAGTGATTAAACTCAAACA+TGG | - | chr1.3:16036713-16036732 | None:intergenic | 25.0% |
| ! | TACTTATTTCAAGATGTTTG+AGG | - | chr1.3:16036003-16036022 | None:intergenic | 25.0% |
| ! | TGAAAACTAATAATTCCTTC+AGG | - | chr1.3:16036475-16036494 | None:intergenic | 25.0% |
| ! | TGTCGAATTTGAAAAAGATA+TGG | + | chr1.3:16036440-16036459 | MS.gene93198:CDS | 25.0% |
| ! | TTGATAGAGGTTATTATAGT+TGG | + | chr1.3:16036415-16036434 | MS.gene93198:CDS | 25.0% |
| !!! | AATTTAAGGGTATCCAAATT+AGG | - | chr1.3:16035845-16035864 | None:intergenic | 25.0% |
| !!! | TTCTTTGACTTTAGAACATT+TGG | + | chr1.3:16035166-16035185 | MS.gene93198:CDS | 25.0% |
| !!! | TTTTTTATTTGTACTGATGG+TGG | + | chr1.3:16036122-16036141 | MS.gene93198:intron | 25.0% |
| AAAACTTTCAACCAAAGTAG+AGG | - | chr1.3:16035975-16035994 | None:intergenic | 30.0% | |
| AAACTCAATGGTTTCTATAC+TGG | + | chr1.3:16036760-16036779 | MS.gene93198:CDS | 30.0% | |
| AAACTTTCAACCAAAGTAGA+GGG | - | chr1.3:16035974-16035993 | None:intergenic | 30.0% | |
| AAGATGCGATAAATAATCAG+AGG | - | chr1.3:16035210-16035229 | None:intergenic | 30.0% | |
| ACACTATATATCCTCAAAGA+TGG | - | chr1.3:16036805-16036824 | None:intergenic | 30.0% | |
| ATATAATGAGCTTGAGAAGT+TGG | + | chr1.3:16036312-16036331 | MS.gene93198:CDS | 30.0% | |
| CAATGAAAATAACAGTGTAG+AGG | + | chr1.3:16036381-16036400 | MS.gene93198:CDS | 30.0% | |
| CTAACATAAATCATCACTGA+AGG | - | chr1.3:16035798-16035817 | None:intergenic | 30.0% | |
| GAAAGTCATATTGAAGGATA+TGG | + | chr1.3:16036183-16036202 | MS.gene93198:CDS | 30.0% | |
| GAACAATTGCAAGAAAATTG+TGG | + | chr1.3:16036261-16036280 | MS.gene93198:CDS | 30.0% | |
| GTATAGAAACCATTGAGTTT+AGG | - | chr1.3:16036760-16036779 | None:intergenic | 30.0% | |
| GTGGCTATTTATGAATTCAT+AGG | + | chr1.3:16036141-16036160 | MS.gene93198:intron | 30.0% | |
| TTTATCGCATCTTAGAAGTA+AGG | + | chr1.3:16035217-16035236 | MS.gene93198:CDS | 30.0% | |
| ! | AAAAATGGTGTAGAAGCATA+AGG | - | chr1.3:16035263-16035282 | None:intergenic | 30.0% |
| !! | AGAAGTAAGGAAAAGTATCA+AGG | + | chr1.3:16035230-16035249 | MS.gene93198:CDS | 30.0% |
| AACTTTCAACCAAAGTAGAG+GGG | - | chr1.3:16035973-16035992 | None:intergenic | 35.0% | |
| AAGTAATTGCTCTTTGATGG+AGG | + | chr1.3:16036018-16036037 | MS.gene93198:CDS | 35.0% | |
| AGATGAGAGAAACAATGCAT+TGG | + | chr1.3:16036054-16036073 | MS.gene93198:CDS | 35.0% | |
| AGCTTGATTGTGGATAATTG+TGG | + | chr1.3:16035929-16035948 | MS.gene93198:CDS | 35.0% | |
| CAATTGCAAGAAAATTGTGG+TGG | + | chr1.3:16036264-16036283 | MS.gene93198:CDS | 35.0% | |
| CATAAATGATTGTCCAAGCT+TGG | + | chr1.3:16036513-16036532 | MS.gene93198:CDS | 35.0% | |
| GAGAAGTGAGCTCAATTTAA+GGG | - | chr1.3:16035858-16035877 | None:intergenic | 35.0% | |
| GGATACATCACATTTGATAG+AGG | + | chr1.3:16036402-16036421 | MS.gene93198:CDS | 35.0% | |
| GTAGGTTGCATTTCCTAATT+TGG | + | chr1.3:16035829-16035848 | MS.gene93198:intron | 35.0% | |
| GTATTTATTCCCCTCTACTT+TGG | + | chr1.3:16035961-16035980 | MS.gene93198:CDS | 35.0% | |
| TGAGAAGTGAGCTCAATTTA+AGG | - | chr1.3:16035859-16035878 | None:intergenic | 35.0% | |
| TGGACAACTTGAAGACAATA+TGG | + | chr1.3:16036203-16036222 | MS.gene93198:CDS | 35.0% | |
| TTGATTGTGGATAATTGTGG+TGG | + | chr1.3:16035932-16035951 | MS.gene93198:CDS | 35.0% | |
| ! | ATGAATTTGTTCAGAACTCC+AGG | + | chr1.3:16036841-16036860 | MS.gene93198:CDS | 35.0% |
| ! | ATTTTTGCAGAGGAGAAACT+TGG | + | chr1.3:16036619-16036638 | MS.gene93198:CDS | 35.0% |
| ! | TATGTGTTTTGCACTGAAGA+AGG | - | chr1.3:16036295-16036314 | None:intergenic | 35.0% |
| !! | CATACCTGAGCATTGAAAAA+TGG | - | chr1.3:16035278-16035297 | None:intergenic | 35.0% |
| !! | TACACCATTTTTCAATGCTC+AGG | + | chr1.3:16035271-16035290 | MS.gene93198:CDS | 35.0% |
| ATATGGAGTAGAGATCCTGA+AGG | + | chr1.3:16036457-16036476 | MS.gene93198:CDS | 40.0% | |
| ATTCCTGCTTCCTTTCCTAT+TGG | + | chr1.3:16035126-16035145 | MS.gene93198:CDS | 40.0% | |
| GAGAAACAATGCATTGGAAG+AGG | + | chr1.3:16036060-16036079 | MS.gene93198:CDS | 40.0% | |
| TAATGAGCTTGAGAAGTTGG+AGG | + | chr1.3:16036315-16036334 | MS.gene93198:CDS | 40.0% | |
| TCAAAGAACGCATGATACAG+TGG | - | chr1.3:16035154-16035173 | None:intergenic | 40.0% | |
| TGGCACTTACCTAAACTCAA+TGG | + | chr1.3:16036748-16036767 | MS.gene93198:CDS | 40.0% | |
| ! | CATGGAGGAAATTTTTGCAG+AGG | + | chr1.3:16036609-16036628 | MS.gene93198:CDS | 40.0% |
| !! | CAACTTGACTAGCTTGATTG+TGG | + | chr1.3:16035919-16035938 | MS.gene93198:CDS | 40.0% |
| GGTAATAGATGCTCCAAGCT+TGG | - | chr1.3:16036529-16036548 | None:intergenic | 45.0% | |
| TGTGCAGGAAATTGTTGCAG+AGG | + | chr1.3:16036660-16036679 | MS.gene93198:CDS | 45.0% | |
| TTTCCTTTCACACCTTCAGC+TGG | + | chr1.3:16035093-16035112 | MS.gene93198:CDS | 45.0% | |
| ! | CATGATACAGTGGTGCCAAT+AGG | - | chr1.3:16035144-16035163 | None:intergenic | 45.0% |
| ! | TACAGTGGTGCCAATAGGAA+AGG | - | chr1.3:16035139-16035158 | None:intergenic | 45.0% |
| ATTGATGCTGAGCCAGCTGA+AGG | - | chr1.3:16035108-16035127 | None:intergenic | 50.0% | |
| CACTCGTTGCTCACATCTCA+AGG | + | chr1.3:16036561-16036580 | MS.gene93198:CDS | 50.0% | |
| CTCTGCTGTGTCCATCTTTG+AGG | + | chr1.3:16036791-16036810 | MS.gene93198:CDS | 50.0% | |
| CTTGAGATGTGAGCAACGAG+TGG | - | chr1.3:16036563-16036582 | None:intergenic | 50.0% | |
| GGTGCTTTCCTTTCCCTGTT+GGG | + | chr1.3:16035060-16035079 | MS.gene93198:CDS | 50.0% | |
| GTGCCAATAGGAAAGGAAGC+AGG | - | chr1.3:16035132-16035151 | None:intergenic | 50.0% | |
| GTGTGAAAGGAAAGAGCCCA+AGG | - | chr1.3:16035086-16035105 | None:intergenic | 50.0% | |
| ! | CAACAGGGAAAGGAAAGCAC+CGG | - | chr1.3:16035061-16035080 | None:intergenic | 50.0% |
| AAAGAGCCCAAGGCCCAACA+GGG | - | chr1.3:16035076-16035095 | None:intergenic | 55.0% | |
| ACATAGTCACGTGCCCAAGC+CGG | + | chr1.3:16035039-16035058 | MS.gene93198:CDS | 55.0% | |
| CAACGAGTGGCTACAGAGAG+TGG | - | chr1.3:16036550-16036569 | None:intergenic | 55.0% | |
| CGGTGCTTTCCTTTCCCTGT+TGG | + | chr1.3:16035059-16035078 | MS.gene93198:CDS | 55.0% | |
| GACTATGTGGGAGTCCCACT+TGG | - | chr1.3:16035027-16035046 | None:intergenic | 55.0% | |
| GCTTGGGCACGTGACTATGT+GGG | - | chr1.3:16035039-16035058 | None:intergenic | 55.0% | |
| TCCTTTCCCTGTTGGGCCTT+GGG | + | chr1.3:16035067-16035086 | MS.gene93198:CDS | 55.0% | |
| TTCCTTTCCCTGTTGGGCCT+TGG | + | chr1.3:16035066-16035085 | MS.gene93198:CDS | 55.0% | |
| ! | GAGCCAGCTGAAGGTGTGAA+AGG | - | chr1.3:16035099-16035118 | None:intergenic | 55.0% |
| !! | GGAAAGGAAAGCACCGGCTT+GGG | - | chr1.3:16035055-16035074 | None:intergenic | 55.0% |
| GAAAGAGCCCAAGGCCCAAC+AGG | - | chr1.3:16035077-16035096 | None:intergenic | 60.0% | |
| GGCTTGGGCACGTGACTATG+TGG | - | chr1.3:16035040-16035059 | None:intergenic | 60.0% | |
| !! | GGGAAAGGAAAGCACCGGCT+TGG | - | chr1.3:16035056-16035075 | None:intergenic | 60.0% |
| GCCCAAGGCCCAACAGGGAA+AGG | - | chr1.3:16035071-16035090 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 16035011 | 16036879 | 16035011 | ID=MS.gene93198 |
| chr1.3 | mRNA | 16035011 | 16036879 | 16035011 | ID=MS.gene93198.t1;Parent=MS.gene93198 |
| chr1.3 | exon | 16035011 | 16035292 | 16035011 | ID=MS.gene93198.t1.exon1;Parent=MS.gene93198.t1 |
| chr1.3 | CDS | 16035011 | 16035292 | 16035011 | ID=cds.MS.gene93198.t1;Parent=MS.gene93198.t1 |
| chr1.3 | exon | 16035833 | 16036081 | 16035833 | ID=MS.gene93198.t1.exon2;Parent=MS.gene93198.t1 |
| chr1.3 | CDS | 16035833 | 16036081 | 16035833 | ID=cds.MS.gene93198.t1;Parent=MS.gene93198.t1 |
| chr1.3 | exon | 16036163 | 16036879 | 16036163 | ID=MS.gene93198.t1.exon3;Parent=MS.gene93198.t1 |
| chr1.3 | CDS | 16036163 | 16036879 | 16036163 | ID=cds.MS.gene93198.t1;Parent=MS.gene93198.t1 |
| Gene Sequence |
| Protein sequence |
