Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005607.01.T01 | XP_013469837.1 | 96 | 325 | 8 | 1 | 1 | 320 | 1 | 325 | 0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005607.01.T01 | Q43317 | 83.385 | 325 | 49 | 1 | 1 | 320 | 1 | 325 | 0 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005607.01.T01 | A0A072W0S8 | 96.000 | 325 | 8 | 1 | 1 | 320 | 1 | 325 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049072.01 | MsG0180005607.01 | 0.805413 | 1.350829e-49 | 7.142122e-47 |
| MsG0180000306.01 | MsG0180005607.01 | 0.802843 | 4.627883e-49 | 2.290615e-46 |
| MsG0180003296.01 | MsG0180005607.01 | 0.808860 | 2.516039e-50 | 1.454577e-47 |
| MsG0180003779.01 | MsG0180005607.01 | 0.814250 | 1.695173e-51 | 1.131655e-48 |
| MsG0180003904.01 | MsG0180005607.01 | 0.815471 | 9.090388e-52 | 6.273579e-49 |
| MsG0180003985.01 | MsG0180005607.01 | 0.826113 | 3.241926e-54 | 3.012273e-51 |
| MsG0180004177.01 | MsG0180005607.01 | 0.816563 | 5.185346e-52 | 3.686776e-49 |
| MsG0180005607.01 | MsG0280006307.01 | 0.800996 | 1.109114e-48 | 5.238329e-46 |
| MsG0180005607.01 | MsG0280006336.01 | 0.815908 | 7.262036e-52 | 5.071494e-49 |
| MsG0180005607.01 | MsG0280007783.01 | 0.813918 | 2.007078e-51 | 1.327837e-48 |
| MsG0180005607.01 | MsG0280010149.01 | 0.807026 | 6.179177e-50 | 3.405076e-47 |
| MsG0180005607.01 | MsG0280010704.01 | 0.808038 | 3.769364e-50 | 2.132579e-47 |
| MsG0180005607.01 | MsG0280011301.01 | 0.802720 | 4.907599e-49 | 2.421362e-46 |
| MsG0180005607.01 | MsG0380011693.01 | 0.818610 | 1.791720e-52 | 1.347479e-49 |
| MsG0180005607.01 | MsG0380013506.01 | 0.804209 | 2.410841e-49 | 1.235709e-46 |
| MsG0180005607.01 | MsG0380015271.01 | 0.808399 | 3.156332e-50 | 1.802957e-47 |
| MsG0180005607.01 | MsG0380016241.01 | 0.804564 | 2.033095e-49 | 1.051668e-46 |
| MsG0180005607.01 | MsG0380016362.01 | 0.827000 | 1.991625e-54 | 1.898258e-51 |
| MsG0180005607.01 | MsG0380016896.01 | 0.802505 | 5.435267e-49 | 2.666995e-46 |
| MsG0180005607.01 | MsG0380016932.01 | 0.811131 | 8.161322e-51 | 5.011219e-48 |
| MsG0180005607.01 | MsG0380016960.01 | 0.803684 | 3.099305e-49 | 1.567322e-46 |
| MsG0180005607.01 | MsG0380017895.01 | 0.814278 | 1.671250e-51 | 1.116563e-48 |
| MsG0180005607.01 | MsG0380018072.01 | 0.838671 | 2.504297e-57 | 3.378104e-54 |
| MsG0180005607.01 | MsG0480018190.01 | 0.801067 | 1.072344e-48 | 5.073621e-46 |
| MsG0180005607.01 | MsG0480021317.01 | 0.806567 | 7.725562e-50 | 4.207099e-47 |
| MsG0180005607.01 | MsG0480022286.01 | 0.820809 | 5.637150e-53 | 4.506704e-50 |
| MsG0180005607.01 | MsG0480022295.01 | 0.805648 | 1.206080e-49 | 6.415384e-47 |
| MsG0180005607.01 | MsG0480022837.01 | 0.807265 | 5.500988e-50 | 3.050246e-47 |
| MsG0180005607.01 | MsG0480023749.01 | 0.820110 | 8.157316e-53 | 6.397099e-50 |
| MsG0180005607.01 | MsG0580024309.01 | 0.800232 | 1.587141e-48 | 7.351605e-46 |
| MsG0180005607.01 | MsG0580024678.01 | 0.811451 | 6.954993e-51 | 4.306714e-48 |
| MsG0180005607.01 | MsG0580024875.01 | 0.820880 | 5.428013e-53 | 4.348169e-50 |
| MsG0180005607.01 | MsG0580029172.01 | 0.825141 | 5.509963e-54 | 4.980408e-51 |
| MsG0180005607.01 | MsG0580030014.01 | 0.818239 | 2.174977e-52 | 1.619002e-49 |
| MsG0180005607.01 | MsG0780036064.01 | 0.826184 | 3.117310e-54 | 2.902487e-51 |
| MsG0180005607.01 | MsG0780036068.01 | 0.804583 | 2.014408e-49 | 1.042533e-46 |
| MsG0180005607.01 | MsG0780040621.01 | -0.818518 | 1.879572e-52 | 1.410089e-49 |
| MsG0180005607.01 | MsG0780040833.01 | 0.826822 | 2.196368e-54 | 2.082563e-51 |
| MsG0180005607.01 | MsG0780041106.01 | 0.804468 | 2.129365e-49 | 1.098726e-46 |
| MsG0180005607.01 | MsG0880042889.01 | 0.811308 | 7.469919e-51 | 4.607879e-48 |
| MsG0180005607.01 | MsG0880044352.01 | 0.830889 | 2.277340e-55 | 2.431479e-52 |
| MsG0180005607.01 | MsG0880045778.01 | 0.826241 | 3.022678e-54 | 2.818885e-51 |
| MsG0180005607.01 | MsG0880046759.01 | 0.820552 | 6.458761e-53 | 5.126609e-50 |
| MsG0180005607.01 | MsG0880047363.01 | 0.815832 | 7.551897e-52 | 5.262983e-49 |
| MsG0180005607.01 | MsG0880047628.01 | 0.826546 | 2.556033e-54 | 2.404419e-51 |
| MsG0180005607.01 | MsG0880047661.01 | 0.814419 | 1.555977e-51 | 1.043540e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180005607.01 | MsG0780039711.01 | PPI |
| MsG0180005607.01 | MsG0480022298.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005607.01.T01 | MTR_1g103690 | 96.000 | 325 | 8 | 1 | 1 | 320 | 1 | 325 | 0.0 | 617 |
| MsG0180005607.01.T01 | MTR_5g006340 | 92.308 | 325 | 20 | 1 | 1 | 320 | 1 | 325 | 0.0 | 556 |
| MsG0180005607.01.T01 | MTR_1g081610 | 85.802 | 324 | 41 | 1 | 1 | 319 | 1 | 324 | 0.0 | 515 |
| MsG0180005607.01.T01 | MTR_4g087490 | 70.126 | 318 | 90 | 1 | 8 | 320 | 47 | 364 | 1.68e-164 | 462 |
| MsG0180005607.01.T01 | MTR_1g081620 | 71.651 | 321 | 86 | 1 | 4 | 319 | 3 | 323 | 7.63e-160 | 449 |
| MsG0180005607.01.T01 | MTR_1g081625 | 71.875 | 320 | 85 | 1 | 5 | 319 | 4 | 323 | 8.94e-156 | 439 |
| MsG0180005607.01.T01 | MTR_4g087510 | 65.723 | 318 | 95 | 3 | 8 | 320 | 47 | 355 | 3.52e-151 | 428 |
| MsG0180005607.01.T01 | MTR_7g078070 | 60.443 | 316 | 120 | 1 | 6 | 316 | 59 | 374 | 3.22e-137 | 394 |
| MsG0180005607.01.T01 | MTR_7g078070 | 61.364 | 308 | 114 | 1 | 14 | 316 | 7 | 314 | 4.00e-135 | 386 |
| MsG0180005607.01.T01 | MTR_7g087110 | 61.905 | 315 | 105 | 2 | 7 | 316 | 64 | 368 | 7.02e-130 | 375 |
| MsG0180005607.01.T01 | MTR_4g087520 | 71.852 | 270 | 71 | 1 | 56 | 320 | 1 | 270 | 2.36e-127 | 365 |
| MsG0180005607.01.T01 | MTR_1g081640 | 68.551 | 283 | 84 | 1 | 3 | 280 | 2 | 284 | 1.44e-125 | 362 |
| MsG0180005607.01.T01 | MTR_7g078070 | 61.210 | 281 | 104 | 1 | 41 | 316 | 1 | 281 | 3.06e-122 | 352 |
| MsG0180005607.01.T01 | MTR_5g095670 | 29.261 | 352 | 187 | 6 | 12 | 302 | 48 | 398 | 4.52e-41 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005607.01.T01 | AT4G14880 | 79.624 | 319 | 60 | 1 | 6 | 319 | 3 | 321 | 6.12e-178 | 495 |
| MsG0180005607.01.T01 | AT4G14880 | 79.624 | 319 | 60 | 1 | 6 | 319 | 3 | 321 | 6.12e-178 | 495 |
| MsG0180005607.01.T01 | AT4G14880 | 79.624 | 319 | 60 | 1 | 6 | 319 | 3 | 321 | 6.12e-178 | 495 |
| MsG0180005607.01.T01 | AT4G14880 | 79.624 | 319 | 60 | 1 | 6 | 319 | 3 | 321 | 6.12e-178 | 495 |
| MsG0180005607.01.T01 | AT4G14880 | 79.624 | 319 | 60 | 1 | 6 | 319 | 3 | 321 | 6.12e-178 | 495 |
| MsG0180005607.01.T01 | AT2G43750 | 73.913 | 322 | 79 | 1 | 3 | 319 | 70 | 391 | 1.96e-159 | 451 |
| MsG0180005607.01.T01 | AT2G43750 | 73.913 | 322 | 79 | 1 | 3 | 319 | 70 | 391 | 1.96e-159 | 451 |
| MsG0180005607.01.T01 | AT3G59760 | 73.585 | 318 | 79 | 1 | 7 | 319 | 112 | 429 | 2.10e-159 | 452 |
| MsG0180005607.01.T01 | AT3G59760 | 73.585 | 318 | 79 | 1 | 7 | 319 | 112 | 429 | 2.71e-159 | 452 |
| MsG0180005607.01.T01 | AT3G04940 | 67.284 | 324 | 101 | 1 | 1 | 319 | 1 | 324 | 1.44e-151 | 428 |
| MsG0180005607.01.T01 | AT3G04940 | 67.284 | 324 | 101 | 1 | 1 | 319 | 1 | 324 | 1.44e-151 | 428 |
| MsG0180005607.01.T01 | AT5G28020 | 70.093 | 321 | 91 | 1 | 4 | 319 | 3 | 323 | 6.07e-150 | 424 |
| MsG0180005607.01.T01 | AT5G28020 | 70.093 | 321 | 91 | 1 | 4 | 319 | 3 | 323 | 6.07e-150 | 424 |
| MsG0180005607.01.T01 | AT5G28020 | 70.093 | 321 | 91 | 1 | 4 | 319 | 3 | 323 | 6.07e-150 | 424 |
| MsG0180005607.01.T01 | AT5G28020 | 70.093 | 321 | 91 | 1 | 4 | 319 | 3 | 323 | 6.07e-150 | 424 |
| MsG0180005607.01.T01 | AT5G28020 | 70.093 | 321 | 91 | 1 | 4 | 319 | 3 | 323 | 6.07e-150 | 424 |
| MsG0180005607.01.T01 | AT3G59760 | 74.483 | 290 | 69 | 1 | 7 | 291 | 112 | 401 | 2.43e-144 | 414 |
| MsG0180005607.01.T01 | AT3G22460 | 74.815 | 270 | 43 | 2 | 56 | 320 | 1 | 250 | 2.45e-142 | 402 |
| MsG0180005607.01.T01 | AT5G28030 | 67.290 | 321 | 100 | 1 | 4 | 319 | 3 | 323 | 2.16e-141 | 402 |
| MsG0180005607.01.T01 | AT5G28030 | 67.290 | 321 | 100 | 1 | 4 | 319 | 3 | 323 | 2.16e-141 | 402 |
| MsG0180005607.01.T01 | AT5G28030 | 67.290 | 321 | 100 | 1 | 4 | 319 | 3 | 323 | 2.16e-141 | 402 |
| MsG0180005607.01.T01 | AT5G28030 | 67.290 | 321 | 100 | 1 | 4 | 319 | 3 | 323 | 2.16e-141 | 402 |
| MsG0180005607.01.T01 | AT3G61440 | 60.897 | 312 | 117 | 1 | 10 | 316 | 51 | 362 | 5.97e-131 | 377 |
| MsG0180005607.01.T01 | AT3G03630 | 60.625 | 320 | 111 | 2 | 4 | 318 | 95 | 404 | 4.68e-126 | 367 |
| MsG0180005607.01.T01 | AT3G61440 | 62.030 | 266 | 96 | 1 | 56 | 316 | 1 | 266 | 6.00e-113 | 328 |
| MsG0180005607.01.T01 | AT3G22460 | 82.873 | 181 | 26 | 1 | 8 | 183 | 8 | 188 | 3.57e-107 | 310 |
| MsG0180005607.01.T01 | AT5G28030 | 64.919 | 248 | 82 | 1 | 4 | 246 | 3 | 250 | 3.72e-107 | 313 |
| MsG0180005607.01.T01 | AT3G61440 | 59.160 | 262 | 102 | 1 | 10 | 266 | 51 | 312 | 1.41e-104 | 309 |
| MsG0180005607.01.T01 | AT3G61440 | 62.083 | 240 | 91 | 0 | 77 | 316 | 2 | 241 | 3.53e-103 | 303 |
| MsG0180005607.01.T01 | AT5G28020 | 69.620 | 237 | 72 | 0 | 83 | 319 | 1 | 237 | 4.29e-103 | 302 |
| MsG0180005607.01.T01 | AT1G55880 | 27.978 | 361 | 197 | 7 | 4 | 302 | 36 | 395 | 1.30e-38 | 141 |
| MsG0180005607.01.T01 | AT1G55880 | 30.544 | 239 | 121 | 4 | 12 | 205 | 44 | 282 | 4.59e-32 | 122 |
Find 101 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACAAATAGGCCTTCTTTA+AGG | 0.116413 | 1:+93912665 | None:intergenic |
| AGAACCATTCTTCTCTCTTT+TGG | 0.169837 | 1:-93913849 | MsG0180005607.01.T01:CDS |
| AATAAAATGTAACAACAAAT+TGG | 0.191649 | 1:+93915242 | None:intergenic |
| GCCCCTTTCATTCCCTTTGC+AGG | 0.215231 | 1:+93913804 | None:intergenic |
| TTTATATTATGCAGCTGTTT+GGG | 0.243063 | 1:-93913360 | MsG0180005607.01.T01:intron |
| TGCTGCCAAACTGGAATTAA+TGG | 0.244427 | 1:-93914607 | MsG0180005607.01.T01:CDS |
| ATCAATACCGATTCAGATTT+CGG | 0.253118 | 1:+93912224 | None:intergenic |
| ACTAAAGATGACCTTGATAT+TGG | 0.278605 | 1:+93913485 | None:intergenic |
| GGGCATCGGATTGGCCTTCT+TGG | 0.298899 | 1:-93913931 | MsG0180005607.01.T01:CDS |
| CGGCCTTCAACTGGAATTCA+TGG | 0.299101 | 1:+93912244 | None:intergenic |
| GATGCATTTGTTAGTGGTAT+AGG | 0.323643 | 1:-93913558 | MsG0180005607.01.T01:CDS |
| ACTCACTTCTGTAATATCTT+TGG | 0.326873 | 1:+93914799 | None:intergenic |
| TACAAATAGGCCTTCTTTAA+GGG | 0.332946 | 1:+93912666 | None:intergenic |
| TTCAGATTTCGGCCTTCAAC+TGG | 0.345908 | 1:+93912235 | None:intergenic |
| TTCAAATTGCTGAAGGATAT+AGG | 0.362222 | 1:+93913740 | None:intergenic |
| ATATTTCCCAACACCTGTTA+TGG | 0.367102 | 1:+93913524 | None:intergenic |
| AAACCACTGGTCCAGAGATA+TGG | 0.372068 | 1:-93913602 | MsG0180005607.01.T01:CDS |
| TGCTCGAGTTGCTGCCAAAC+TGG | 0.377214 | 1:-93914616 | MsG0180005607.01.T01:CDS |
| AAAGTTGATGCATTTGTTAG+TGG | 0.411743 | 1:-93913564 | MsG0180005607.01.T01:CDS |
| TGCTGAAGGATATAGGCATT+TGG | 0.414477 | 1:+93913747 | None:intergenic |
| ATGCCCGTATTGCCACTTGT+TGG | 0.417507 | 1:+93913948 | None:intergenic |
| CCTGTGCCTTTCCATATCTC+TGG | 0.417592 | 1:+93913591 | None:intergenic |
| AATGATAAGCTTGTAGCCTT+TGG | 0.418235 | 1:+93913902 | None:intergenic |
| TCTGAATCGGTATTGATAGA+TGG | 0.418758 | 1:-93912218 | MsG0180005607.01.T01:three_prime_UTR |
| ATAGGTACCTTTGGATTGGC+AGG | 0.419227 | 1:+93913714 | None:intergenic |
| GGTACTGGCGGTACCATAAC+AGG | 0.430113 | 1:-93913537 | MsG0180005607.01.T01:CDS |
| GTTGAATACAGAATAGATTC+AGG | 0.432685 | 1:+93912104 | None:intergenic |
| ATCTTCTGTGCTGTTTGAAT+CGG | 0.434360 | 1:-93912299 | MsG0180005607.01.T01:CDS |
| CTTTCAAGACTCATTGAAGC+AGG | 0.439398 | 1:+93913873 | None:intergenic |
| GAACCATGAATTCCAGTTGA+AGG | 0.440518 | 1:-93912247 | MsG0180005607.01.T01:exon |
| GATATAGGCATTTGGAGTCT+TGG | 0.449955 | 1:+93913755 | None:intergenic |
| AAGCTTCTTGCCCTTAAAGA+AGG | 0.457267 | 1:-93912676 | MsG0180005607.01.T01:CDS |
| ATAAAATGTAACAACAAATT+GGG | 0.457357 | 1:+93915243 | None:intergenic |
| ATTCAGGAGTCTTCTGCAAA+AGG | 0.457495 | 1:+93912120 | None:intergenic |
| TTTGTTAGTGGTATAGGTAC+TGG | 0.464910 | 1:-93913552 | MsG0180005607.01.T01:CDS |
| GACAGTACAGGACTTTCAAC+TGG | 0.465463 | 1:+93913331 | None:intergenic |
| TGGTTCCATTAATTCCAGTT+TGG | 0.469327 | 1:+93914602 | None:intergenic |
| ATTCAAACAGCACAGAAGAT+AGG | 0.476594 | 1:+93912302 | None:intergenic |
| GAATTCATGGTTCAAAAGTC+AGG | 0.476630 | 1:+93912257 | None:intergenic |
| TGAGCCAACAAGTGGCAATA+CGG | 0.481402 | 1:-93913952 | MsG0180005607.01.T01:intron |
| AAGATTCAAGGGATTGGTGC+TGG | 0.484894 | 1:-93913185 | MsG0180005607.01.T01:CDS |
| GCCTTTGGCTGCTGCCAAGA+AGG | 0.490662 | 1:+93913917 | None:intergenic |
| GATTGCTGATGCAGAGGAGA+AGG | 0.491875 | 1:-93914422 | MsG0180005607.01.T01:CDS |
| TGGAGCTGAGTTGGTTCTGA+CGG | 0.494857 | 1:-93913829 | MsG0180005607.01.T01:CDS |
| AGGTACCTCTCACCAAAGCT+AGG | 0.500820 | 1:+93912322 | None:intergenic |
| ACCATGGCAGTTGAAAGGTC+TGG | 0.505654 | 1:-93914827 | MsG0180005607.01.T01:CDS |
| CTAGGTCCACACAAGATTCA+AGG | 0.507556 | 1:-93913197 | MsG0180005607.01.T01:intron |
| GATCCTGCAAAGGGAATGAA+AGG | 0.508872 | 1:-93913807 | MsG0180005607.01.T01:CDS |
| GGGACTAATTACGCCTGGCC+AGG | 0.509762 | 1:-93914401 | MsG0180005607.01.T01:intron |
| TGGCAATACGGGCATCGGAT+TGG | 0.510586 | 1:-93913940 | MsG0180005607.01.T01:CDS |
| GGCGGTACCATAACAGGTGT+TGG | 0.511350 | 1:-93913531 | MsG0180005607.01.T01:CDS |
| CCACACAAGATTCAAGGGAT+TGG | 0.512912 | 1:-93913191 | MsG0180005607.01.T01:CDS |
| GCCTTCTTGGCAGCAGCCAA+AGG | 0.516788 | 1:-93913918 | MsG0180005607.01.T01:CDS |
| TGCTGTTTGAATCGGTGAGA+CGG | 0.517705 | 1:-93912291 | MsG0180005607.01.T01:CDS |
| GTACTGTCCGGAGGAAAGCC+TGG | 0.517823 | 1:-93913316 | MsG0180005607.01.T01:intron |
| TCCAGACCTTTCAACTGCCA+TGG | 0.518086 | 1:+93914826 | None:intergenic |
| TAACAAGTACCAACCTGGCC+AGG | 0.519163 | 1:+93914388 | None:intergenic |
| GAGCCAACAAGTGGCAATAC+GGG | 0.523351 | 1:-93913951 | MsG0180005607.01.T01:CDS |
| GTAGATAGGTACCTTTGGAT+TGG | 0.525339 | 1:+93913710 | None:intergenic |
| GCGGTACCATAACAGGTGTT+GGG | 0.526442 | 1:-93913530 | MsG0180005607.01.T01:CDS |
| ACAAGTGGCAATACGGGCAT+CGG | 0.529614 | 1:-93913945 | MsG0180005607.01.T01:CDS |
| TATTATGCAGCTGTTTGGGG+TGG | 0.530340 | 1:-93913356 | MsG0180005607.01.T01:intron |
| AGAGCGGAATTCCAATATCA+AGG | 0.532021 | 1:-93913496 | MsG0180005607.01.T01:intron |
| TAACTAACCAGGCTTTCCTC+CGG | 0.534921 | 1:+93913309 | None:intergenic |
| GGCTTTCCTCCGGACAGTAC+AGG | 0.535171 | 1:+93913319 | None:intergenic |
| TTTCCATATCTCTGGACCAG+TGG | 0.541184 | 1:+93913599 | None:intergenic |
| GGTAATTCAGAAACGCAACC+TGG | 0.543535 | 1:+93912179 | None:intergenic |
| TTATATTATGCAGCTGTTTG+GGG | 0.546665 | 1:-93913359 | MsG0180005607.01.T01:intron |
| GTTCTGACGGATCCTGCAAA+GGG | 0.551736 | 1:-93913816 | MsG0180005607.01.T01:CDS |
| TTGAAGGCCGAAATCTGAAT+CGG | 0.552563 | 1:-93912231 | MsG0180005607.01.T01:three_prime_UTR |
| GTTGAAAGTCCTGTACTGTC+CGG | 0.559552 | 1:-93913328 | MsG0180005607.01.T01:CDS |
| GAGAAGGGACTAATTACGCC+TGG | 0.562602 | 1:-93914406 | MsG0180005607.01.T01:CDS |
| GCTGTTTGAATCGGTGAGAC+GGG | 0.567929 | 1:-93912290 | MsG0180005607.01.T01:CDS |
| GGTTCTGACGGATCCTGCAA+AGG | 0.568942 | 1:-93913817 | MsG0180005607.01.T01:CDS |
| CTGAAACCATGGCAGTTGAA+AGG | 0.570234 | 1:-93914832 | MsG0180005607.01.T01:exon |
| CATGCTCTAGTGTAAAAGAC+AGG | 0.572827 | 1:-93914581 | MsG0180005607.01.T01:intron |
| TAGGTACCTTTGGATTGGCA+GGG | 0.578890 | 1:+93913715 | None:intergenic |
| GTTGTAGTGAGCTGAAACCA+TGG | 0.580942 | 1:-93914843 | MsG0180005607.01.T01:intron |
| GTCCTTATTGAGCCAACAAG+TGG | 0.589600 | 1:-93913960 | MsG0180005607.01.T01:intron |
| CCAGAGATATGGAAAGGCAC+AGG | 0.593497 | 1:-93913591 | MsG0180005607.01.T01:CDS |
| AGCTCCAAAAGAGAGAAGAA+TGG | 0.598518 | 1:+93913845 | None:intergenic |
| AGTATATCTGAATAAAATCA+CGG | 0.598658 | 1:-93914649 | MsG0180005607.01.T01:CDS |
| GAGATATGGAAAGGCACAGG+AGG | 0.606059 | 1:-93913588 | MsG0180005607.01.T01:CDS |
| ATTGCTGATGCAGAGGAGAA+GGG | 0.608166 | 1:-93914421 | MsG0180005607.01.T01:CDS |
| ATCCTGCAAAGGGAATGAAA+GGG | 0.610783 | 1:-93913806 | MsG0180005607.01.T01:CDS |
| TAGTATGATTGCTGATGCAG+AGG | 0.611040 | 1:-93914428 | MsG0180005607.01.T01:CDS |
| TAGGTCCACACAAGATTCAA+GGG | 0.617279 | 1:-93913196 | MsG0180005607.01.T01:CDS |
| TGAAAACCCTGCCAATCCAA+AGG | 0.621387 | 1:-93913721 | MsG0180005607.01.T01:intron |
| TATCTGAATAAAATCACGGA+TGG | 0.622319 | 1:-93914645 | MsG0180005607.01.T01:CDS |
| CCAATCCCTTGAATCTTGTG+TGG | 0.626382 | 1:+93913191 | None:intergenic |
| GGTACCTCTCACCAAAGCTA+GGG | 0.626738 | 1:+93912323 | None:intergenic |
| AGACTAACGTCCAATACCCC+AGG | 0.626927 | 1:+93913155 | None:intergenic |
| CAGGTGCATTATGAAACCAC+TGG | 0.627492 | 1:-93913615 | MsG0180005607.01.T01:CDS |
| TCCTGCAAAGGGAATGAAAG+GGG | 0.649085 | 1:-93913805 | MsG0180005607.01.T01:CDS |
| AGATATGGAAAGGCACAGGA+GGG | 0.656003 | 1:-93913587 | MsG0180005607.01.T01:CDS |
| TTGGGAAATATCTTAAAGAG+CGG | 0.658950 | 1:-93913512 | MsG0180005607.01.T01:CDS |
| ACTGGTCCAGAGATATGGAA+AGG | 0.666229 | 1:-93913597 | MsG0180005607.01.T01:CDS |
| GAAAGTCCTGTACTGTCCGG+AGG | 0.670657 | 1:-93913325 | MsG0180005607.01.T01:CDS |
| GTTAGTGGTATAGGTACTGG+CGG | 0.684198 | 1:-93913549 | MsG0180005607.01.T01:CDS |
| GTTTGAATCGGTGAGACGGG+AGG | 0.688551 | 1:-93912287 | MsG0180005607.01.T01:CDS |
| TTTATTCAGATATACTAACG+GGG | 0.743072 | 1:+93914656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACATAATTAATCAAT+TGG | + | Chr1:93912127-93912146 | None:intergenic | 10.0% |
| !!! | ATAAAAATATTTTGAATATC+TGG | - | Chr1:93914857-93914876 | MsG0180005607.01.T01:intron | 10.0% |
| !!! | TAAATTTAGTTTTATAGAAA+AGG | + | Chr1:93915243-93915262 | None:intergenic | 10.0% |
| !!! | TATTTTTATCAAAAAACTTA+TGG | + | Chr1:93914846-93914865 | None:intergenic | 10.0% |
| !! | AATAAAATGTAACAACAAAT+TGG | + | Chr1:93912039-93912058 | None:intergenic | 15.0% |
| !! | ATAAAATGTAACAACAAATT+GGG | + | Chr1:93912038-93912057 | None:intergenic | 15.0% |
| !! | ATTTATAACATAAATTGCAA+AGG | + | Chr1:93912817-93912836 | None:intergenic | 15.0% |
| !! | TAAAACAATATTCATATTAG+AGG | + | Chr1:93914726-93914745 | None:intergenic | 15.0% |
| !!! | ATTTTATTCAGATATACTAA+CGG | + | Chr1:93912627-93912646 | None:intergenic | 15.0% |
| !!! | TCTAATATGAATATTGTTTT+AGG | - | Chr1:93914725-93914744 | MsG0180005607.01.T01:intron | 15.0% |
| !!! | TTCTTTTGAAATAACTTTTA+TGG | + | Chr1:93915123-93915142 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTTCCTG+TGG | - | Chr1:93912263-93912282 | MsG0180005607.01.T01:CDS | 15.0% |
| !! | AAGATATATTTAGGTATCAA+AGG | + | Chr1:93914231-93914250 | None:intergenic | 20.0% |
| !! | AATTTAACTGTTAAAGTTTC+TGG | - | Chr1:93914356-93914375 | MsG0180005607.01.T01:intron | 20.0% |
| !! | AGTATATCTGAATAAAATCA+CGG | - | Chr1:93912629-93912648 | MsG0180005607.01.T01:intron | 20.0% |
| !! | CAACTATACAAAATAAACAA+CGG | + | Chr1:93912592-93912611 | None:intergenic | 20.0% |
| !! | GATAAATTAGAATTATTCAG+TGG | + | Chr1:93912186-93912205 | None:intergenic | 20.0% |
| !! | GCAATTTATGTTATAAATGT+AGG | - | Chr1:93912819-93912838 | MsG0180005607.01.T01:intron | 20.0% |
| !! | GTAATGATTAATCAAAATTC+AGG | + | Chr1:93912298-93912317 | None:intergenic | 20.0% |
| !! | TAATTAAATGTTTCTTACTG+TGG | - | Chr1:93912551-93912570 | MsG0180005607.01.T01:intron | 20.0% |
| !! | TGGTATGTTATAGAAAAAAA+GGG | - | Chr1:93914886-93914905 | MsG0180005607.01.T01:intron | 20.0% |
| !! | TTATGTTATAAATGTAGGAT+TGG | - | Chr1:93912824-93912843 | MsG0180005607.01.T01:intron | 20.0% |
| !! | TTGAAACAAAACAAGAAATT+AGG | + | Chr1:93913896-93913915 | None:intergenic | 20.0% |
| !! | TTGGTATGTTATAGAAAAAA+AGG | - | Chr1:93914885-93914904 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | ATATGAATATTGTTTTAGGT+TGG | - | Chr1:93914729-93914748 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | ATGTCTTTTTGCAATTTTTT+TGG | - | Chr1:93914498-93914517 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | CTTGTATATTATTTGAGTTT+TGG | - | Chr1:93912740-93912759 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | GTTTATTTTGTATAGTTGAT+CGG | - | Chr1:93912594-93912613 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | TATTGTCATCATTTTTCATA+AGG | - | Chr1:93912071-93912090 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | TGACAATTTTCATTTTGATA+TGG | - | Chr1:93914919-93914938 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | TTGTGAATGTAATTTTTAGA+TGG | - | Chr1:93914466-93914485 | MsG0180005607.01.T01:intron | 20.0% |
| !!! | TTTTATTCAGATATACTAAC+GGG | + | Chr1:93912626-93912645 | None:intergenic | 20.0% |
| ! | AAAAATGATGACAATAGCTT+AGG | + | Chr1:93912067-93912086 | None:intergenic | 25.0% |
| ! | AAACAAAACAAGAAATTAGG+AGG | + | Chr1:93913893-93913912 | None:intergenic | 25.0% |
| ! | AAATTAGAATTATTCAGTGG+TGG | + | Chr1:93912183-93912202 | None:intergenic | 25.0% |
| ! | AAGCCAATAGTAAAAGATAA+AGG | + | Chr1:93914292-93914311 | None:intergenic | 25.0% |
| ! | ACTGATCAAAATAATTTCGT+TGG | - | Chr1:93915209-93915228 | MsG0180005607.01.T01:five_prime_UTR | 25.0% |
| ! | AGATTAAAATGAAAGTTCGT+AGG | - | Chr1:93912914-93912933 | MsG0180005607.01.T01:intron | 25.0% |
| ! | AGTTAAATTATTTGAGAGAG+TGG | + | Chr1:93914345-93914364 | None:intergenic | 25.0% |
| ! | CGAGTCATTAAGATATATTT+AGG | + | Chr1:93914240-93914259 | None:intergenic | 25.0% |
| ! | GAGAAATACTAGTACTAATT+TGG | - | Chr1:93913061-93913080 | MsG0180005607.01.T01:intron | 25.0% |
| ! | GTTATAACTTATAACTAACC+AGG | + | Chr1:93913983-93914002 | None:intergenic | 25.0% |
| ! | TATGTAAGATTTAGTAAACC+AGG | + | Chr1:93914416-93914435 | None:intergenic | 25.0% |
| ! | TGAATACTAGGAAATATGAT+AGG | - | Chr1:93913035-93913054 | MsG0180005607.01.T01:intron | 25.0% |
| ! | TTTATATTATGCAGCTGTTT+GGG | - | Chr1:93913918-93913937 | MsG0180005607.01.T01:CDS | 25.0% |
| ! | TTTATTCAGATATACTAACG+GGG | + | Chr1:93912625-93912644 | None:intergenic | 25.0% |
| !! | CAACTTTTATGTTGAATACT+AGG | - | Chr1:93913023-93913042 | MsG0180005607.01.T01:intron | 25.0% |
| !! | TCTCCTTTATCTTTTACTAT+TGG | - | Chr1:93914286-93914305 | MsG0180005607.01.T01:intron | 25.0% |
| !! | TTTTATATTATGCAGCTGTT+TGG | - | Chr1:93913917-93913936 | MsG0180005607.01.T01:CDS | 25.0% |
| !!! | ATTGATAGATGGATTTTCAT+TGG | - | Chr1:93915071-93915090 | MsG0180005607.01.T01:intron | 25.0% |
| AAAATGAAAGTTCGTAGGAT+TGG | - | Chr1:93912919-93912938 | MsG0180005607.01.T01:intron | 30.0% | |
| ACTAAAGATGACCTTGATAT+TGG | + | Chr1:93913796-93913815 | None:intergenic | 30.0% | |
| ACTCACTTCTGTAATATCTT+TGG | + | Chr1:93912482-93912501 | None:intergenic | 30.0% | |
| ACTCATTTGTTCTACAACTT+TGG | - | Chr1:93913589-93913608 | MsG0180005607.01.T01:CDS | 30.0% | |
| AGTGTTATCACAGAAAATAG+TGG | - | Chr1:93913109-93913128 | MsG0180005607.01.T01:intron | 30.0% | |
| ATAAATACCAGTGATCAGTT+TGG | + | Chr1:93913271-93913290 | None:intergenic | 30.0% | |
| ATCAAACTTAATACGTGATG+GGG | + | Chr1:93914201-93914220 | None:intergenic | 30.0% | |
| CAAAATAAACAACGGACATT+AGG | + | Chr1:93912584-93912603 | None:intergenic | 30.0% | |
| CACAAGATAAGTTTGTATTG+TGG | + | Chr1:93914451-93914470 | None:intergenic | 30.0% | |
| CATCAAACTTAATACGTGAT+GGG | + | Chr1:93914202-93914221 | None:intergenic | 30.0% | |
| CTAATCAGATATCTAAACCA+GGG | - | Chr1:93912149-93912168 | MsG0180005607.01.T01:three_prime_UTR | 30.0% | |
| GTTATCATCGTTGTATTTAC+AGG | - | Chr1:93913644-93913663 | MsG0180005607.01.T01:intron | 30.0% | |
| GTTGAATACAGAATAGATTC+AGG | + | Chr1:93915177-93915196 | None:intergenic | 30.0% | |
| GTTTCTTAGTTCATTATCAC+TGG | - | Chr1:93913085-93913104 | MsG0180005607.01.T01:intron | 30.0% | |
| TAAACCTGATATGTGTGATT+TGG | - | Chr1:93914546-93914565 | MsG0180005607.01.T01:intron | 30.0% | |
| TACAAAAGATTGTGAAACAG+CGG | + | Chr1:93913171-93913190 | None:intergenic | 30.0% | |
| TACAAATAGGCCTTCTTTAA+GGG | + | Chr1:93914615-93914634 | None:intergenic | 30.0% | |
| TATCTGAATAAAATCACGGA+TGG | - | Chr1:93912633-93912652 | MsG0180005607.01.T01:intron | 30.0% | |
| TATTTAACCAAACTGATCAC+TGG | - | Chr1:93913261-93913280 | MsG0180005607.01.T01:intron | 30.0% | |
| TCATCAAACTTAATACGTGA+TGG | + | Chr1:93914203-93914222 | None:intergenic | 30.0% | |
| TCTAATCAGATATCTAAACC+AGG | - | Chr1:93912148-93912167 | MsG0180005607.01.T01:three_prime_UTR | 30.0% | |
| TGTAGAACAAATGAGTAGAT+AGG | + | Chr1:93913585-93913604 | None:intergenic | 30.0% | |
| TTAACGATGTATAGTTCATC+TGG | + | Chr1:93912989-93913008 | None:intergenic | 30.0% | |
| TTACAAATAGGCCTTCTTTA+AGG | + | Chr1:93914616-93914635 | None:intergenic | 30.0% | |
| TTATATTATGCAGCTGTTTG+GGG | - | Chr1:93913919-93913938 | MsG0180005607.01.T01:CDS | 30.0% | |
| TTCAAATTGCTGAAGGATAT+AGG | + | Chr1:93913541-93913560 | None:intergenic | 30.0% | |
| TTGGGAAATATCTTAAAGAG+CGG | - | Chr1:93913766-93913785 | MsG0180005607.01.T01:CDS | 30.0% | |
| TTGTACTAAATAGTGCATCA+TGG | - | Chr1:93913186-93913205 | MsG0180005607.01.T01:CDS | 30.0% | |
| ! | AAGATTTTCTCGTATCCAAT+TGG | - | Chr1:93912362-93912381 | MsG0180005607.01.T01:intron | 30.0% |
| ! | ATTATTTGAGAGAGTGGTTT+TGG | + | Chr1:93914339-93914358 | None:intergenic | 30.0% |
| ! | TACTATTTTACTGTCGTACT+TGG | - | Chr1:93914686-93914705 | MsG0180005607.01.T01:intron | 30.0% |
| ! | TCTACAACTTTGGTAGTTAA+TGG | - | Chr1:93913599-93913618 | MsG0180005607.01.T01:CDS | 30.0% |
| ! | TTTTTGTGTTGTATGCATCA+TGG | - | Chr1:93912228-93912247 | MsG0180005607.01.T01:three_prime_UTR | 30.0% |
| !! | AAAGTTGATGCATTTGTTAG+TGG | - | Chr1:93913714-93913733 | MsG0180005607.01.T01:intron | 30.0% |
| !! | ATCAATACCGATTCAGATTT+CGG | + | Chr1:93915057-93915076 | None:intergenic | 30.0% |
| !! | TGGTCTTTTTGCTATCTTAA+TGG | + | Chr1:93914784-93914803 | None:intergenic | 30.0% |
| !! | TTTACTATTGGCTTCCTAAA+TGG | - | Chr1:93914298-93914317 | MsG0180005607.01.T01:intron | 30.0% |
| !! | TTTTCATTTTGATATGGTGC+AGG | - | Chr1:93914925-93914944 | MsG0180005607.01.T01:intron | 30.0% |
| !!! | TTTTAGGTTGGAATATCATC+TGG | - | Chr1:93914741-93914760 | MsG0180005607.01.T01:intron | 30.0% |
| !!! | TTTTTTTTTCCTGTGGAATC+AGG | - | Chr1:93912270-93912289 | MsG0180005607.01.T01:CDS | 30.0% |
| AATGAGTAGATAGGTACCTT+TGG | + | Chr1:93913576-93913595 | None:intergenic | 35.0% | |
| AATGATAAGCTTGTAGCCTT+TGG | + | Chr1:93913379-93913398 | None:intergenic | 35.0% | |
| AATGCACAAAAAGCCAATTG+TGG | - | Chr1:93914381-93914400 | MsG0180005607.01.T01:intron | 35.0% | |
| AATTGCCATGATAAACGTCT+AGG | - | Chr1:93914063-93914082 | MsG0180005607.01.T01:intron | 35.0% | |
| ACAACACTAAGTGCAAGATT+TGG | - | Chr1:93913832-93913851 | MsG0180005607.01.T01:CDS | 35.0% | |
| ACAAGAAATTAGGAGGAAAG+AGG | + | Chr1:93913886-93913905 | None:intergenic | 35.0% | |
| ATATTTCCCAACACCTGTTA+TGG | + | Chr1:93913757-93913776 | None:intergenic | 35.0% | |
| ATCTTTAACAAGTACCAACC+TGG | + | Chr1:93912898-93912917 | None:intergenic | 35.0% | |
| ATTCAAACAGCACAGAAGAT+AGG | + | Chr1:93914979-93914998 | None:intergenic | 35.0% | |
| CAAATGTGCCTTAATCCAAT+TGG | + | Chr1:93912380-93912399 | None:intergenic | 35.0% | |
| CAATTGGATTAAGGCACATT+TGG | - | Chr1:93912378-93912397 | MsG0180005607.01.T01:intron | 35.0% | |
| CAATTGTGGACTTAAAATCC+TGG | - | Chr1:93914395-93914414 | MsG0180005607.01.T01:intron | 35.0% | |
| CACAAACGAAGCTTACAAAT+AGG | + | Chr1:93914628-93914647 | None:intergenic | 35.0% | |
| GAATTCATGGTTCAAAAGTC+AGG | + | Chr1:93915024-93915043 | None:intergenic | 35.0% | |
| GGTATTTATGTTGTTGCATG+CGG | - | Chr1:93913282-93913301 | MsG0180005607.01.T01:intron | 35.0% | |
| TAGTTAATGGTTGGCAACTT+TGG | - | Chr1:93913612-93913631 | MsG0180005607.01.T01:CDS | 35.0% | |
| TCTCGTATCCAATTGGATTA+AGG | - | Chr1:93912369-93912388 | MsG0180005607.01.T01:intron | 35.0% | |
| TGGTTCCATTAATTCCAGTT+TGG | + | Chr1:93912679-93912698 | None:intergenic | 35.0% | |
| TTTGTTAGTGGTATAGGTAC+TGG | - | Chr1:93913726-93913745 | MsG0180005607.01.T01:CDS | 35.0% | |
| ! | AGAACCATTCTTCTCTCTTT+TGG | - | Chr1:93913429-93913448 | MsG0180005607.01.T01:intron | 35.0% |
| ! | ATAAGCTTTCCAGCATTTTC+TGG | + | Chr1:93914804-93914823 | None:intergenic | 35.0% |
| ! | CAACTTTGGTAGTTAATGGT+TGG | - | Chr1:93913603-93913622 | MsG0180005607.01.T01:CDS | 35.0% |
| ! | CGAGCAACATTCTTTTGAAT+TGG | - | Chr1:93912775-93912794 | MsG0180005607.01.T01:intron | 35.0% |
| ! | GATGCATTTGTTAGTGGTAT+AGG | - | Chr1:93913720-93913739 | MsG0180005607.01.T01:intron | 35.0% |
| ! | TTTTGAATATCTGGCACAGT+TGG | - | Chr1:93914866-93914885 | MsG0180005607.01.T01:intron | 35.0% |
| !! | ATCTTCTGTGCTGTTTGAAT+CGG | - | Chr1:93914979-93914998 | MsG0180005607.01.T01:intron | 35.0% |
| !! | CAGGATTTTAAGTCCACAAT+TGG | + | Chr1:93914397-93914416 | None:intergenic | 35.0% |
| !! | TCTGAATCGGTATTGATAGA+TGG | - | Chr1:93915060-93915079 | MsG0180005607.01.T01:intron | 35.0% |
| AAATTAGGAGGAAAGAGGAG+AGG | + | Chr1:93913881-93913900 | None:intergenic | 40.0% | |
| AAGCTTCTTGCCCTTAAAGA+AGG | - | Chr1:93914602-93914621 | MsG0180005607.01.T01:CDS | 40.0% | |
| AGAGCGGAATTCCAATATCA+AGG | - | Chr1:93913782-93913801 | MsG0180005607.01.T01:CDS | 40.0% | |
| AGCTCCAAAAGAGAGAAGAA+TGG | + | Chr1:93913436-93913455 | None:intergenic | 40.0% | |
| ATCCTGCAAAGGGAATGAAA+GGG | - | Chr1:93913472-93913491 | MsG0180005607.01.T01:intron | 40.0% | |
| ATTCAGGAGTCTTCTGCAAA+AGG | + | Chr1:93915161-93915180 | None:intergenic | 40.0% | |
| CATGCTCTAGTGTAAAAGAC+AGG | - | Chr1:93912697-93912716 | MsG0180005607.01.T01:CDS | 40.0% | |
| CTTTCAAGACTCATTGAAGC+AGG | + | Chr1:93913408-93913427 | None:intergenic | 40.0% | |
| GAACCATGAATTCCAGTTGA+AGG | - | Chr1:93915031-93915050 | MsG0180005607.01.T01:intron | 40.0% | |
| GCAAAAAGACCAGAAAATGC+TGG | - | Chr1:93914792-93914811 | MsG0180005607.01.T01:intron | 40.0% | |
| GCTATAACACTGTTGCATAG+CGG | + | Chr1:93913147-93913166 | None:intergenic | 40.0% | |
| GTAGATAGGTACCTTTGGAT+TGG | + | Chr1:93913571-93913590 | None:intergenic | 40.0% | |
| GTTTCAGCTCACTACAACAT+TGG | + | Chr1:93912433-93912452 | None:intergenic | 40.0% | |
| TAGGTCCACACAAGATTCAA+GGG | - | Chr1:93914082-93914101 | MsG0180005607.01.T01:intron | 40.0% | |
| TAGTATGATTGCTGATGCAG+AGG | - | Chr1:93912850-93912869 | MsG0180005607.01.T01:intron | 40.0% | |
| TCTGCCAAATCACACATATC+AGG | + | Chr1:93914553-93914572 | None:intergenic | 40.0% | |
| TCTTGCACTTAGTGTTGTCT+CGG | + | Chr1:93913830-93913849 | None:intergenic | 40.0% | |
| TGCTGAAGGATATAGGCATT+TGG | + | Chr1:93913534-93913553 | None:intergenic | 40.0% | |
| TGCTGCCAAACTGGAATTAA+TGG | - | Chr1:93912671-93912690 | MsG0180005607.01.T01:CDS | 40.0% | |
| TTGAAGGCCGAAATCTGAAT+CGG | - | Chr1:93915047-93915066 | MsG0180005607.01.T01:intron | 40.0% | |
| ! | CAGGGTTTTCAAATTGCTGA+AGG | + | Chr1:93913548-93913567 | None:intergenic | 40.0% |
| ! | CTGTCTTTTACACTAGAGCA+TGG | + | Chr1:93912699-93912718 | None:intergenic | 40.0% |
| ! | GATATAGGCATTTGGAGTCT+TGG | + | Chr1:93913526-93913545 | None:intergenic | 40.0% |
| !! | AGGAAGGGTTTTAGCCATTT+AGG | + | Chr1:93914315-93914334 | None:intergenic | 40.0% |
| !!! | TTTGAGAGAGTGGTTTTGGT+AGG | + | Chr1:93914335-93914354 | None:intergenic | 40.0% |
| AAACCACTGGTCCAGAGATA+TGG | - | Chr1:93913676-93913695 | MsG0180005607.01.T01:intron | 45.0% | |
| ACTGGTCCAGAGATATGGAA+AGG | - | Chr1:93913681-93913700 | MsG0180005607.01.T01:intron | 45.0% | |
| ATAGCAGCGCTATTGCTTAG+CGG | + | Chr1:93913235-93913254 | None:intergenic | 45.0% | |
| ATTCAGGATCCTGATTCCAC+AGG | + | Chr1:93912282-93912301 | None:intergenic | 45.0% | |
| ATTGCTGATGCAGAGGAGAA+GGG | - | Chr1:93912857-93912876 | MsG0180005607.01.T01:intron | 45.0% | |
| CAGGTGCATTATGAAACCAC+TGG | - | Chr1:93913663-93913682 | MsG0180005607.01.T01:intron | 45.0% | |
| CCAATCCCTTGAATCTTGTG+TGG | + | Chr1:93914090-93914109 | None:intergenic | 45.0% | |
| CCACACAAGATTCAAGGGAT+TGG | - | Chr1:93914087-93914106 | MsG0180005607.01.T01:intron | 45.0% | |
| CTAGGTCCACACAAGATTCA+AGG | - | Chr1:93914081-93914100 | MsG0180005607.01.T01:intron | 45.0% | |
| CTGAAACCATGGCAGTTGAA+AGG | - | Chr1:93912446-93912465 | MsG0180005607.01.T01:intron | 45.0% | |
| GACAGTACAGGACTTTCAAC+TGG | + | Chr1:93913950-93913969 | None:intergenic | 45.0% | |
| GATCCTGCAAAGGGAATGAA+AGG | - | Chr1:93913471-93913490 | MsG0180005607.01.T01:intron | 45.0% | |
| GGTAATTCAGAAACGCAACC+TGG | + | Chr1:93915102-93915121 | None:intergenic | 45.0% | |
| GTCCTTATTGAGCCAACAAG+TGG | - | Chr1:93913318-93913337 | MsG0180005607.01.T01:CDS | 45.0% | |
| GTGGACCTAGACGTTTATCA+TGG | + | Chr1:93914071-93914090 | None:intergenic | 45.0% | |
| GTTGAAAGTCCTGTACTGTC+CGG | - | Chr1:93913950-93913969 | MsG0180005607.01.T01:CDS | 45.0% | |
| GTTGTAGTGAGCTGAAACCA+TGG | - | Chr1:93912435-93912454 | MsG0180005607.01.T01:intron | 45.0% | |
| TAACTAACCAGGCTTTCCTC+CGG | + | Chr1:93913972-93913991 | None:intergenic | 45.0% | |
| TATTATGCAGCTGTTTGGGG+TGG | - | Chr1:93913922-93913941 | MsG0180005607.01.T01:CDS | 45.0% | |
| TCCTGCAAAGGGAATGAAAG+GGG | - | Chr1:93913473-93913492 | MsG0180005607.01.T01:intron | 45.0% | |
| TGAAAACCCTGCCAATCCAA+AGG | - | Chr1:93913557-93913576 | MsG0180005607.01.T01:CDS | 45.0% | |
| TGAGCCAACAAGTGGCAATA+CGG | - | Chr1:93913326-93913345 | MsG0180005607.01.T01:CDS | 45.0% | |
| TTCAGATTTCGGCCTTCAAC+TGG | + | Chr1:93915046-93915065 | None:intergenic | 45.0% | |
| TTTCCATATCTCTGGACCAG+TGG | + | Chr1:93913682-93913701 | None:intergenic | 45.0% | |
| ! | AAGATTCAAGGGATTGGTGC+TGG | - | Chr1:93914093-93914112 | MsG0180005607.01.T01:intron | 45.0% |
| ! | AGATATGGAAAGGCACAGGA+GGG | - | Chr1:93913691-93913710 | MsG0180005607.01.T01:intron | 45.0% |
| ! | GGATTTTCATTGGCAAAGCC+AGG | - | Chr1:93915081-93915100 | MsG0180005607.01.T01:intron | 45.0% |
| ! | TGCTGTTTGAATCGGTGAGA+CGG | - | Chr1:93914987-93915006 | MsG0180005607.01.T01:intron | 45.0% |
| !! | ATAGGTACCTTTGGATTGGC+AGG | + | Chr1:93913567-93913586 | None:intergenic | 45.0% |
| !! | CAGGTTGTTTTCCCTAGCTT+TGG | - | Chr1:93914944-93914963 | MsG0180005607.01.T01:intron | 45.0% |
| !! | GTTAGTGGTATAGGTACTGG+CGG | - | Chr1:93913729-93913748 | MsG0180005607.01.T01:CDS | 45.0% |
| !! | TAGGTACCTTTGGATTGGCA+GGG | + | Chr1:93913566-93913585 | None:intergenic | 45.0% |
| !! | TGCCACTTGTTGGCTCAATA+AGG | + | Chr1:93913323-93913342 | None:intergenic | 45.0% |
| !!! | AGAGAGTGGTTTTGGTAGGA+AGG | + | Chr1:93914331-93914350 | None:intergenic | 45.0% |
| !!! | ATTGGTGCTGGTTTTGTTCC+TGG | - | Chr1:93914105-93914124 | MsG0180005607.01.T01:intron | 45.0% |
| !!! | GAGAGTGGTTTTGGTAGGAA+GGG | + | Chr1:93914330-93914349 | None:intergenic | 45.0% |
| !!! | TCTCTCTTTTGGAGCTGAGT+TGG | - | Chr1:93913440-93913459 | MsG0180005607.01.T01:intron | 45.0% |
| !!! | TGGTTTTGTTCCTGGGGTAT+TGG | - | Chr1:93914113-93914132 | MsG0180005607.01.T01:intron | 45.0% |
| !!! | TTGGTGCTGGTTTTGTTCCT+GGG | - | Chr1:93914106-93914125 | MsG0180005607.01.T01:intron | 45.0% |
| !!! | TTTTCCCTAGCTTTGGTGAG+AGG | - | Chr1:93914951-93914970 | MsG0180005607.01.T01:intron | 45.0% |
| ACAAGTGGCAATACGGGCAT+CGG | - | Chr1:93913333-93913352 | MsG0180005607.01.T01:CDS | 50.0% | |
| ACCATGGCAGTTGAAAGGTC+TGG | - | Chr1:93912451-93912470 | MsG0180005607.01.T01:intron | 50.0% | |
| AGACTAACGTCCAATACCCC+AGG | + | Chr1:93914126-93914145 | None:intergenic | 50.0% | |
| AGGTACCTCTCACCAAAGCT+AGG | + | Chr1:93914959-93914978 | None:intergenic | 50.0% | |
| CCTGTGCCTTTCCATATCTC+TGG | + | Chr1:93913690-93913709 | None:intergenic | 50.0% | |
| CGGCCTTCAACTGGAATTCA+TGG | + | Chr1:93915037-93915056 | None:intergenic | 50.0% | |
| GAGAAGGGACTAATTACGCC+TGG | - | Chr1:93912872-93912891 | MsG0180005607.01.T01:intron | 50.0% | |
| GAGCCAACAAGTGGCAATAC+GGG | - | Chr1:93913327-93913346 | MsG0180005607.01.T01:CDS | 50.0% | |
| GATTGCTGATGCAGAGGAGA+AGG | - | Chr1:93912856-93912875 | MsG0180005607.01.T01:intron | 50.0% | |
| GCGGTACCATAACAGGTGTT+GGG | - | Chr1:93913748-93913767 | MsG0180005607.01.T01:CDS | 50.0% | |
| GCTGTTTGAATCGGTGAGAC+GGG | - | Chr1:93914988-93915007 | MsG0180005607.01.T01:intron | 50.0% | |
| GGTACCTCTCACCAAAGCTA+GGG | + | Chr1:93914958-93914977 | None:intergenic | 50.0% | |
| TAACAAGTACCAACCTGGCC+AGG | + | Chr1:93912893-93912912 | None:intergenic | 50.0% | |
| TCCAGACCTTTCAACTGCCA+TGG | + | Chr1:93912455-93912474 | None:intergenic | 50.0% | |
| ! | ATGCCCGTATTGCCACTTGT+TGG | + | Chr1:93913333-93913352 | None:intergenic | 50.0% |
| ! | CAGTGGTGGAAGATAAACCC+TGG | + | Chr1:93912169-93912188 | None:intergenic | 50.0% |
| ! | CCAGAGATATGGAAAGGCAC+AGG | - | Chr1:93913687-93913706 | MsG0180005607.01.T01:intron | 50.0% |
| ! | GAGATATGGAAAGGCACAGG+AGG | - | Chr1:93913690-93913709 | MsG0180005607.01.T01:intron | 50.0% |
| ! | GTTCTGACGGATCCTGCAAA+GGG | - | Chr1:93913462-93913481 | MsG0180005607.01.T01:intron | 50.0% |
| !! | TGGAGCTGAGTTGGTTCTGA+CGG | - | Chr1:93913449-93913468 | MsG0180005607.01.T01:intron | 50.0% |
| !!! | TGGTGCTGGTTTTGTTCCTG+GGG | - | Chr1:93914107-93914126 | MsG0180005607.01.T01:intron | 50.0% |
| CTAATTACGCCTGGCCAGGT+TGG | - | Chr1:93912881-93912900 | MsG0180005607.01.T01:intron | 55.0% | |
| GAAAGTCCTGTACTGTCCGG+AGG | - | Chr1:93913953-93913972 | MsG0180005607.01.T01:intron | 55.0% | |
| GCCCCTTTCATTCCCTTTGC+AGG | + | Chr1:93913477-93913496 | None:intergenic | 55.0% | |
| GGCGGTACCATAACAGGTGT+TGG | - | Chr1:93913747-93913766 | MsG0180005607.01.T01:CDS | 55.0% | |
| GTTTGAATCGGTGAGACGGG+AGG | - | Chr1:93914991-93915010 | MsG0180005607.01.T01:intron | 55.0% | |
| ! | GGTTCTGACGGATCCTGCAA+AGG | - | Chr1:93913461-93913480 | MsG0180005607.01.T01:intron | 55.0% |
| ! | TGCTCGAGTTGCTGCCAAAC+TGG | - | Chr1:93912662-93912681 | MsG0180005607.01.T01:intron | 55.0% |
| !! | GGTACTGGCGGTACCATAAC+AGG | - | Chr1:93913741-93913760 | MsG0180005607.01.T01:CDS | 55.0% |
| !! | TGGCAATACGGGCATCGGAT+TGG | - | Chr1:93913338-93913357 | MsG0180005607.01.T01:CDS | 55.0% |
| GCCTTCTTGGCAGCAGCCAA+AGG | - | Chr1:93913360-93913379 | MsG0180005607.01.T01:intron | 60.0% | |
| GCCTTTGGCTGCTGCCAAGA+AGG | + | Chr1:93913364-93913383 | None:intergenic | 60.0% | |
| GGCTTTCCTCCGGACAGTAC+AGG | + | Chr1:93913962-93913981 | None:intergenic | 60.0% | |
| GGGACTAATTACGCCTGGCC+AGG | - | Chr1:93912877-93912896 | MsG0180005607.01.T01:intron | 60.0% | |
| GTACTGTCCGGAGGAAAGCC+TGG | - | Chr1:93913962-93913981 | MsG0180005607.01.T01:intron | 60.0% | |
| !! | GGGCATCGGATTGGCCTTCT+TGG | - | Chr1:93913347-93913366 | MsG0180005607.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 93912030 | 93915270 | 93912030 | ID=MsG0180005607.01;Name=MsG0180005607.01 |
| Chr1 | mRNA | 93912030 | 93915270 | 93912030 | ID=MsG0180005607.01.T01;Parent=MsG0180005607.01;Name=MsG0180005607.01.T01;_AED=0.33;_eAED=0.33;_QI=75|0.90|0.91|1|0.81|0.66|12|197|320 |
| Chr1 | exon | 93912030 | 93912063 | 93912030 | ID=MsG0180005607.01.T01:exon:49980;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93912098 | 93912353 | 93912098 | ID=MsG0180005607.01.T01:exon:49979;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93912473 | 93912553 | 93912473 | ID=MsG0180005607.01.T01:exon:49978;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93912669 | 93912728 | 93912669 | ID=MsG0180005607.01.T01:exon:49977;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93913136 | 93913215 | 93913136 | ID=MsG0180005607.01.T01:exon:49976;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93913317 | 93913368 | 93913317 | ID=MsG0180005607.01.T01:exon:49975;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93913497 | 93913634 | 93913497 | ID=MsG0180005607.01.T01:exon:49974;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93913722 | 93913970 | 93913722 | ID=MsG0180005607.01.T01:exon:49973;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93914402 | 93914459 | 93914402 | ID=MsG0180005607.01.T01:exon:49972;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93914582 | 93914691 | 93914582 | ID=MsG0180005607.01.T01:exon:49971;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93914805 | 93914858 | 93914805 | ID=MsG0180005607.01.T01:exon:49970;Parent=MsG0180005607.01.T01 |
| Chr1 | exon | 93915208 | 93915270 | 93915208 | ID=MsG0180005607.01.T01:exon:49969;Parent=MsG0180005607.01.T01 |
| Chr1 | five_prime_UTR | 93915208 | 93915270 | 93915208 | ID=MsG0180005607.01.T01:five_prime_utr;Parent=MsG0180005607.01.T01 |
| Chr1 | five_prime_UTR | 93914847 | 93914858 | 93914847 | ID=MsG0180005607.01.T01:five_prime_utr;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93914805 | 93914846 | 93914805 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93914582 | 93914691 | 93914582 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93914402 | 93914459 | 93914402 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93913722 | 93913970 | 93913722 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93913497 | 93913634 | 93913497 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93913317 | 93913368 | 93913317 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93913136 | 93913215 | 93913136 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93912669 | 93912728 | 93912669 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93912473 | 93912553 | 93912473 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | CDS | 93912261 | 93912353 | 93912261 | ID=MsG0180005607.01.T01:cds;Parent=MsG0180005607.01.T01 |
| Chr1 | three_prime_UTR | 93912098 | 93912260 | 93912098 | ID=MsG0180005607.01.T01:three_prime_utr;Parent=MsG0180005607.01.T01 |
| Chr1 | three_prime_UTR | 93912030 | 93912063 | 93912030 | ID=MsG0180005607.01.T01:three_prime_utr;Parent=MsG0180005607.01.T01 |
| Gene Sequence |
| Protein sequence |
