AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047628.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047628.01.T01 MTR_4g131760 95.349 258 8 1 1 258 1 254 4.51e-180 513
MsG0880047628.01.T01 MTR_4g131760 98.049 205 4 0 248 452 317 521 4.11e-144 422
MsG0880047628.01.T01 MTR_7g111020 65.854 205 70 0 248 452 192 396 7.96e-95 291
MsG0880047628.01.T01 MTR_7g111020 65.414 133 42 1 126 258 1 129 7.43e-55 187
MsG0880047628.01.T01 MTR_3g112070 64.000 200 72 0 253 452 331 530 6.75e-94 293
MsG0880047628.01.T01 MTR_3g112070 70.556 180 49 1 79 258 88 263 4.29e-89 281
MsG0880047628.01.T01 MTR_4g070430 60.185 216 82 1 237 452 317 528 7.12e-94 293
MsG0880047628.01.T01 MTR_4g070430 63.184 201 66 3 61 258 66 261 1.83e-83 266
MsG0880047628.01.T01 MTR_7g111020 65.854 205 70 0 248 452 324 528 2.44e-93 292
MsG0880047628.01.T01 MTR_7g111020 60.488 205 74 2 57 258 61 261 1.41e-82 264
MsG0880047628.01.T01 MTR_3g116860 63.366 202 74 0 251 452 317 518 2.77e-91 286
MsG0880047628.01.T01 MTR_3g116860 67.232 177 53 2 82 258 80 251 2.21e-82 263
MsG0880047628.01.T01 MTR_4g070430 63.184 201 66 3 61 258 66 261 3.99e-84 266
MsG0880047628.01.T01 MTR_4g070430 57.055 163 66 1 237 399 317 475 4.55e-64 214
MsG0880047628.01.T01 MTR_5g097010 52.657 207 96 2 248 452 309 515 8.63e-67 222
MsG0880047628.01.T01 MTR_5g097010 62.667 150 51 2 99 248 96 240 2.00e-61 208
MsG0880047628.01.T01 MTR_3g082150 53.365 208 93 3 248 452 308 514 1.47e-66 222
MsG0880047628.01.T01 MTR_3g082150 51.111 225 93 5 25 247 29 238 7.81e-62 209
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047628.01.T01 AT5G19220 85.854 205 29 0 248 452 318 522 9.08e-128 380
MsG0880047628.01.T01 AT5G19220 70.498 261 68 4 1 258 1 255 1.61e-125 374
MsG0880047628.01.T01 AT1G27680 64.878 205 72 0 248 452 314 518 1.92e-96 300
MsG0880047628.01.T01 AT1G27680 65.421 214 70 1 54 267 51 260 3.09e-92 289
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT2G21590 60.099 203 81 0 250 452 321 523 1.80e-86 274
MsG0880047628.01.T01 AT2G21590 64.516 186 59 3 75 258 76 256 2.92e-76 248
MsG0880047628.01.T01 AT4G39210 59.804 204 82 0 249 452 318 521 7.06e-86 272
MsG0880047628.01.T01 AT4G39210 63.918 194 65 3 58 247 55 247 6.86e-85 270
MsG0880047628.01.T01 AT4G39210 59.804 204 82 0 249 452 318 521 7.06e-86 272
MsG0880047628.01.T01 AT4G39210 63.918 194 65 3 58 247 55 247 6.86e-85 270
MsG0880047628.01.T01 AT1G05610 36.941 425 195 12 87 446 54 470 2.44e-82 262
MsG0880047628.01.T01 AT1G05610 36.449 428 199 12 87 446 54 476 4.19e-81 259
MsG0880047628.01.T01 AT5G48300 50.917 218 101 3 237 452 307 520 3.26e-66 221
MsG0880047628.01.T01 AT5G48300 54.589 207 88 3 42 248 45 245 2.44e-64 216

Find 115 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTCAAATGTTCATTTAA+AGG 0.138712 8:-88916079 MsG0880047628.01.T01:intron
TCCTCAAATCCGTGGTAAAA+TGG 0.265578 8:+88915272 None:intergenic
TTTCGGTTCCTACTTGATTT+TGG 0.266526 8:+88915738 None:intergenic
TTTCTACTGGTCACCATTCC+TGG 0.267523 8:+88919952 None:intergenic
CTTATCTCTTCAACGATTAC+TGG 0.268611 8:-88916644 MsG0880047628.01.T01:CDS
TCACCGGCGAAGGGACAAAA+TGG 0.271758 8:+88920041 None:intergenic
TTCCAATTGGAGGTGCTTAT+AGG 0.311709 8:-88918471 MsG0880047628.01.T01:CDS
CCTCTACCGTATGGACTATA+TGG 0.343087 8:-88917873 MsG0880047628.01.T01:CDS
ATCACTACGCATTTGAAGAT+TGG 0.360996 8:+88920186 None:intergenic
ATGCTGTGCGGCAGTTTCAC+TGG 0.369035 8:-88918095 MsG0880047628.01.T01:CDS
TTTGCTCGTCGCTTAGTTAG+AGG 0.376799 8:+88918869 None:intergenic
GATGTTAAGATAGACAGAAT+TGG 0.383063 8:+88915157 None:intergenic
TCCGGTACTGGAGTCACTTT+CGG 0.387235 8:-88918337 MsG0880047628.01.T01:CDS
TTCCTAAATTAGGTTCCAAT+TGG 0.393610 8:-88918484 MsG0880047628.01.T01:intron
ATGTTAAGATAGACAGAATT+GGG 0.406966 8:+88915158 None:intergenic
TTTCCAACTGCAAATGACTT+TGG 0.412063 8:-88917114 MsG0880047628.01.T01:CDS
CGTGCTTACAACTCCGGTAC+TGG 0.418287 8:-88918349 MsG0880047628.01.T01:CDS
CACAATGGATATAAATAGAT+TGG 0.419416 8:-88915200 MsG0880047628.01.T01:three_prime_UTR
CACAACCTTCAAGTTTCTAC+TGG 0.421899 8:+88919939 None:intergenic
TTCATAGAGCATAGTGTAGT+TGG 0.423776 8:-88916117 MsG0880047628.01.T01:CDS
GGAAGAGTTCCAATAGGAAT+AGG 0.426216 8:-88915769 MsG0880047628.01.T01:CDS
ATCCTCAATATCCTTGCTCC+TGG 0.426326 8:+88917919 None:intergenic
CTATTGATGCAGTTACTCAT+TGG 0.434110 8:+88918436 None:intergenic
ATAACTGCCACGACTGTACT+TGG 0.437008 8:+88918923 None:intergenic
AGCCTATAAGCACCTCCAAT+TGG 0.440968 8:+88918469 None:intergenic
TCACTACGCATTTGAAGATT+GGG 0.449428 8:+88920187 None:intergenic
CACTCTTTCTTGTCTGCCAA+TGG 0.453178 8:-88917709 MsG0880047628.01.T01:CDS
CTAAATTAGGTTCCAATTGG+AGG 0.458441 8:-88918481 MsG0880047628.01.T01:intron
GACAGAATTGGGATATAAGA+TGG 0.461311 8:+88915169 None:intergenic
ATGAGTAACTGCATCAATAG+TGG 0.461743 8:-88918433 MsG0880047628.01.T01:CDS
GTTATACTTGGTGGAGGAGC+TGG 0.463710 8:-88918905 MsG0880047628.01.T01:CDS
TTTGTCCCTTCGCCGGTGAT+CGG 0.469348 8:-88920037 MsG0880047628.01.T01:five_prime_UTR
TAAAATTCTTTAGCTGAGGC+AGG 0.478517 8:+88917078 None:intergenic
ACCGTTCAGCTACGTGAGCC+AGG 0.478588 8:-88919970 MsG0880047628.01.T01:CDS
TTTCTCCTTGATGTGTACAT+AGG 0.483924 8:+88916337 None:intergenic
AAAATGGTTCAAACAAATGA+TGG 0.486066 8:+88915288 None:intergenic
GGAATTTGAGATGTTAATGA+AGG 0.493532 8:+88920063 None:intergenic
CTTGTCTGCCAATGGATGAC+AGG 0.496401 8:-88917701 MsG0880047628.01.T01:intron
GCAGTTTCACTGGCTCTTTG+AGG 0.499205 8:-88918085 MsG0880047628.01.T01:intron
GGTGACCAGTAGAAACTTGA+AGG 0.503646 8:-88919944 MsG0880047628.01.T01:CDS
CTTGCCGCAACTCAAACTCC+AGG 0.514003 8:-88918153 MsG0880047628.01.T01:CDS
GCTGAGGGAAGAGTTCCAAT+AGG 0.519229 8:-88915775 MsG0880047628.01.T01:CDS
ATACAGGACACAGTGATGCT+TGG 0.524075 8:-88915841 MsG0880047628.01.T01:intron
AAAATTCAACAATTGAAGAC+GGG 0.524972 8:-88915332 MsG0880047628.01.T01:CDS
TCCCAGGAGCAAGGATATTG+AGG 0.529538 8:-88917921 MsG0880047628.01.T01:CDS
ACAGTCGTGGCAGTTATACT+TGG 0.529938 8:-88918917 MsG0880047628.01.T01:CDS
GTCGTGGCAGTTATACTTGG+TGG 0.532140 8:-88918914 MsG0880047628.01.T01:CDS
ACTGGAGTCACTTTCGGAGA+TGG 0.533530 8:-88918331 MsG0880047628.01.T01:CDS
CACCGGCGAAGGGACAAAAT+GGG 0.534273 8:+88920042 None:intergenic
GATCCAAAGTCATTTGCAGT+TGG 0.534676 8:+88917111 None:intergenic
TCCGAAAGTGACTCCAGTAC+CGG 0.535857 8:+88918336 None:intergenic
CATGTCTCTCACTGCTGATG+TGG 0.536057 8:-88919824 MsG0880047628.01.T01:CDS
TACCATCAGATCATTCTTTG+AGG 0.536197 8:-88916610 MsG0880047628.01.T01:CDS
CCATATAGTCCATACGGTAG+AGG 0.536873 8:+88917873 None:intergenic
TTATCTCTTCAACGATTACT+GGG 0.537052 8:-88916643 MsG0880047628.01.T01:CDS
GAGCTTCATGCTGCTACCAA+TGG 0.540764 8:-88919880 MsG0880047628.01.T01:CDS
AACACTCTTGGTGCAACCAT+TGG 0.542518 8:+88919864 None:intergenic
TGCATCGTAAAAGCTAAACT+TGG 0.547364 8:+88916366 None:intergenic
TTGCTATTGTCAATCTTCGA+TGG 0.549202 8:+88916307 None:intergenic
CTATGAAACTGAGGCAGAAG+TGG 0.552867 8:-88915809 MsG0880047628.01.T01:CDS
TTGCTCGTCGCTTAGTTAGA+GGG 0.553232 8:+88918870 None:intergenic
TCCTCAATATCCTTGCTCCT+GGG 0.553261 8:+88917920 None:intergenic
CAAAGTCCATATAGTCCATA+CGG 0.554961 8:+88917867 None:intergenic
AAATGGTTCAAACAAATGAT+GGG 0.563185 8:+88915289 None:intergenic
TGGGGATCACCTCTACCGTA+TGG 0.564627 8:-88917882 MsG0880047628.01.T01:CDS
GTTGCACCAAGAGTGTTACT+AGG 0.567304 8:-88919858 MsG0880047628.01.T01:CDS
CATGTAAAATTCTTTAGCTG+AGG 0.568397 8:+88917074 None:intergenic
GCAACCTACCTGTCATCCAT+TGG 0.568958 8:+88917693 None:intergenic
AATCAATGTCCTACACATGA+AGG 0.570702 8:+88920112 None:intergenic
TCGTAAAAGCTAAACTTGGA+TGG 0.571340 8:+88916370 None:intergenic
TTCCCCTGGAGTTTGAGTTG+CGG 0.572220 8:+88918149 None:intergenic
AACTACACTATGCTCTATGA+AGG 0.573836 8:+88916119 None:intergenic
AACGATTACTGGGAGGACAT+AGG 0.581490 8:-88916633 MsG0880047628.01.T01:CDS
TGCAAATGACTTTGGATCAG+AGG 0.582266 8:-88917106 MsG0880047628.01.T01:CDS
TGATAGCATTATCTGACCAC+TGG 0.582297 8:+88919996 None:intergenic
TGCCTCAAAGAATGATCTGA+TGG 0.583837 8:+88916608 None:intergenic
CAAAACCTATGTACACATCA+AGG 0.586204 8:-88916342 MsG0880047628.01.T01:CDS
ATTGCACGTGCTTACAACTC+CGG 0.586744 8:-88918355 MsG0880047628.01.T01:CDS
ATACAACAGTGACGCCGGAA+CGG 0.588438 8:+88915358 None:intergenic
TGATGTGGCTAGCGAATCCA+AGG 0.589531 8:-88919809 MsG0880047628.01.T01:intron
AGTGGCAGCACAGTTAGCTG+AGG 0.590518 8:-88915791 MsG0880047628.01.T01:CDS
ACTCAAACTCCAGGGGAACA+AGG 0.598679 8:-88918144 MsG0880047628.01.T01:CDS
CTTAGTTAGAGGGAAGAGAC+GGG 0.598965 8:+88918880 None:intergenic
TCCTGGCTCACGTAGCTGAA+CGG 0.602124 8:+88919969 None:intergenic
TGAGTAACTGCATCAATAGT+GGG 0.602456 8:-88918432 MsG0880047628.01.T01:CDS
TTTCAATACAACAGTGACGC+CGG 0.605108 8:+88915353 None:intergenic
GTGGCAGTTATACTTGGTGG+AGG 0.608267 8:-88918911 MsG0880047628.01.T01:CDS
TCAGCTACGTGAGCCAGGAA+TGG 0.608992 8:-88919965 MsG0880047628.01.T01:CDS
GTTGATTCAATTATATCACA+TGG 0.609797 8:-88916159 MsG0880047628.01.T01:CDS
TTGCCGCAACTCAAACTCCA+GGG 0.611763 8:-88918152 MsG0880047628.01.T01:CDS
GAGGCTGATAGATCATCAGA+AGG 0.613138 8:-88915390 MsG0880047628.01.T01:CDS
ACTACACAACCTTCATGTGT+AGG 0.614291 8:-88920121 MsG0880047628.01.T01:five_prime_UTR
GAAGTAGGATCCCAGGAGCA+AGG 0.614406 8:-88917930 MsG0880047628.01.T01:intron
TCAACTGCAGGGAGTACAAG+AGG 0.616616 8:-88915409 MsG0880047628.01.T01:intron
GCTTAGTTAGAGGGAAGAGA+CGG 0.622183 8:+88918879 None:intergenic
GTGGCAGCACAGTTAGCTGA+GGG 0.623997 8:-88915790 MsG0880047628.01.T01:CDS
TGCAATATGTCTGTTGAGTG+AGG 0.624023 8:+88918372 None:intergenic
GATACTCACATGCTCAGTGA+GGG 0.627354 8:+88916578 None:intergenic
CTATTGTCAATCTTCGATGG+TGG 0.633694 8:+88916310 None:intergenic
ATCCAGGATCATCGAGAGAG+CGG 0.634167 8:-88917741 MsG0880047628.01.T01:intron
ATCGAAGATTGACAATAGCA+AGG 0.647211 8:-88916305 MsG0880047628.01.T01:intron
AAGGGATCCAAGTACAGTCG+TGG 0.648334 8:-88918930 MsG0880047628.01.T01:CDS
TAGGACATTGATTTCAAACA+CGG 0.648351 8:-88920102 MsG0880047628.01.T01:five_prime_UTR
AAAGCTCGTCCTCAAATCCG+TGG 0.659004 8:+88915264 None:intergenic
CACATCAGCAGTGAGAGACA+TGG 0.659597 8:+88919825 None:intergenic
TGCCGCAACTCAAACTCCAG+GGG 0.664124 8:-88918151 MsG0880047628.01.T01:CDS
AGCTGATTACTATGAAACTG+AGG 0.673409 8:-88915818 MsG0880047628.01.T01:CDS
AGGCTGATAGATCATCAGAA+GGG 0.673829 8:-88915389 MsG0880047628.01.T01:CDS
TTTCGGAGATGGCTATGTCG+AGG 0.674748 8:-88918320 MsG0880047628.01.T01:intron
TGATACTCACATGCTCAGTG+AGG 0.683087 8:+88916577 None:intergenic
AAAATGGCAGTCTCTGCCAG+TGG 0.689914 8:-88920012 MsG0880047628.01.T01:CDS
TCTCTTCAACGATTACTGGG+AGG 0.713335 8:-88916640 MsG0880047628.01.T01:CDS
AAACACGGACAAGAAGACAA+AGG 0.716788 8:-88920087 MsG0880047628.01.T01:five_prime_UTR
TGTTGTCATAGCAAACTCAG+AGG 0.724048 8:-88915608 MsG0880047628.01.T01:intron
AAGGTACTGCTGATGCTGTG+CGG 0.750182 8:-88918107 MsG0880047628.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAAACACAA+TGG - Chr8:88920097-88920116 MsG0880047628.01.T01:five_prime_UTR 10.0%
!! ATATTTAAATCTCAAAATCA+TGG + Chr8:88918886-88918905 None:intergenic 15.0%
!! GAATTTAAATAACAATTCAT+TGG + Chr8:88915784-88915803 None:intergenic 15.0%
!! TAAATTCCTAAAATGATTTA+AGG - Chr8:88918483-88918502 MsG0880047628.01.T01:intron 15.0%
!!! ACCAATTAATTTAATTTAGA+TGG - Chr8:88918172-88918191 MsG0880047628.01.T01:intron 15.0%
!! AAAAATTCAACAATTGAAGA+CGG - Chr8:88919979-88919998 MsG0880047628.01.T01:CDS 20.0%
!! AAACTCAAATGTTCATTTAA+AGG - Chr8:88919233-88919252 MsG0880047628.01.T01:intron 20.0%
!! AAATTCAATGCAGTAATATA+GGG - Chr8:88916249-88916268 MsG0880047628.01.T01:intron 20.0%
!! AATAAACATACCAAAATACA+TGG + Chr8:88919428-88919447 None:intergenic 20.0%
!! AGATACTTCTTAATCTATTA+AGG - Chr8:88918020-88918039 MsG0880047628.01.T01:intron 20.0%
!! ATGGATTTACAATTATATAG+TGG - Chr8:88915849-88915868 MsG0880047628.01.T01:intron 20.0%
!! GCCATCTAAATTAAATTAAT+TGG + Chr8:88918176-88918195 None:intergenic 20.0%
!! TAAACAAAACTCTTAATCAA+TGG + Chr8:88916102-88916121 None:intergenic 20.0%
!! TAAATTCAATGCAGTAATAT+AGG - Chr8:88916248-88916267 MsG0880047628.01.T01:intron 20.0%
!! TAATGTTGTATCAAAATGTT+AGG - Chr8:88918049-88918068 MsG0880047628.01.T01:intron 20.0%
!! TATATTACTGCATTGAATTT+AGG + Chr8:88916249-88916268 None:intergenic 20.0%
!! TGAAGTTTAATTCATTTCTT+AGG + Chr8:88918785-88918804 None:intergenic 20.0%
!!! AGAAATCTTATGTTTTTCTT+TGG + Chr8:88915759-88915778 None:intergenic 20.0%
!!! ATCTTTTGAAAATAGTAGAT+TGG + Chr8:88919269-88919288 None:intergenic 20.0%
!!! TTTTCACCTTAAATCATTTT+AGG + Chr8:88918492-88918511 None:intergenic 20.0%
! AAAATGGTTCAAACAAATGA+TGG + Chr8:88920027-88920046 None:intergenic 25.0%
! AAAATTCAACAATTGAAGAC+GGG - Chr8:88919980-88919999 MsG0880047628.01.T01:CDS 25.0%
! AAATGGTTCAAACAAATGAT+GGG + Chr8:88920026-88920045 None:intergenic 25.0%
! AAATGTTTCCATATGATGAA+TGG - Chr8:88916318-88916337 MsG0880047628.01.T01:CDS 25.0%
! AAGGAAATGAAAAACGTAAA+TGG - Chr8:88916720-88916739 MsG0880047628.01.T01:intron 25.0%
! AATGTTTCCATATGATGAAT+GGG - Chr8:88916319-88916338 MsG0880047628.01.T01:CDS 25.0%
! AGAAAGGTCACATAATATAT+TGG + Chr8:88919123-88919142 None:intergenic 25.0%
! ATAATTTACAAATCAACGTG+CGG + Chr8:88917105-88917124 None:intergenic 25.0%
! ATGTTAAGATAGACAGAATT+GGG + Chr8:88920157-88920176 None:intergenic 25.0%
! ATGTTCACTTTCACTTATTA+TGG - Chr8:88918616-88918635 MsG0880047628.01.T01:intron 25.0%
! ATTGACAAAAATGCTAGAAT+TGG - Chr8:88919675-88919694 MsG0880047628.01.T01:intron 25.0%
! ATTGTATTACACTTCTATAC+AGG - Chr8:88919455-88919474 MsG0880047628.01.T01:intron 25.0%
! CAAATGTTCATTTAAAGGTT+TGG - Chr8:88919238-88919257 MsG0880047628.01.T01:intron 25.0%
! CACAATGGATATAAATAGAT+TGG - Chr8:88920112-88920131 MsG0880047628.01.T01:five_prime_UTR 25.0%
! GTAAATCAGGTAAGTATATA+TGG + Chr8:88919318-88919337 None:intergenic 25.0%
! TAAAAACTTATAGCTGCTTA+TGG - Chr8:88918446-88918465 MsG0880047628.01.T01:CDS 25.0%
! TACCATGACTATATATGTAT+AGG - Chr8:88915875-88915894 MsG0880047628.01.T01:intron 25.0%
! TACCTATACATATATAGTCA+TGG + Chr8:88915880-88915899 None:intergenic 25.0%
! TCAATTTCAGTTGTAATTGA+TGG - Chr8:88918755-88918774 MsG0880047628.01.T01:intron 25.0%
! TTATGATGAATGGAACAATT+AGG + Chr8:88916510-88916529 None:intergenic 25.0%
!! AAATATGCTTTTCATGAAGT+AGG - Chr8:88917367-88917386 MsG0880047628.01.T01:intron 25.0%
!! AAGCTACAACATATATTTTG+TGG + Chr8:88917282-88917301 None:intergenic 25.0%
!! AATATTCCTAAAGTTTTTGC+TGG - Chr8:88919370-88919389 MsG0880047628.01.T01:intron 25.0%
!! ACTTTTTGTTAGATTAAAGC+TGG - Chr8:88915926-88915945 MsG0880047628.01.T01:intron 25.0%
!! AGCTAAAGAATTTTACATGA+AGG - Chr8:88918242-88918261 MsG0880047628.01.T01:intron 25.0%
!! GTTGATTCAATTATATCACA+TGG - Chr8:88919153-88919172 MsG0880047628.01.T01:intron 25.0%
!! TTAAGACTTTTGTCTAAGTT+AGG + Chr8:88918429-88918448 None:intergenic 25.0%
!! TTACTACACGTAAATTTTGA+AGG - Chr8:88916136-88916155 MsG0880047628.01.T01:CDS 25.0%
!!! AAATGTTAGGTTTTTTCTTG+TGG - Chr8:88918062-88918081 MsG0880047628.01.T01:intron 25.0%
!!! ATTAAGTTGGTTATCTTCTT+TGG - Chr8:88916802-88916821 MsG0880047628.01.T01:intron 25.0%
!!! TTAAGTTGGTTATCTTCTTT+GGG - Chr8:88916803-88916822 MsG0880047628.01.T01:intron 25.0%
!!! TTTGATTCTCTACTTTTGTT+TGG - Chr8:88915812-88915831 MsG0880047628.01.T01:CDS 25.0%
!!! TTTTGTAATGGAGAAATGAT+GGG - Chr8:88915399-88915418 MsG0880047628.01.T01:CDS 25.0%
AAAACCATATATTGCTTCGA+TGG - Chr8:88917976-88917995 MsG0880047628.01.T01:intron 30.0%
AAAATGCAGATGTGGAAAAA+AGG - Chr8:88916363-88916382 MsG0880047628.01.T01:CDS 30.0%
AAACCATATATTGCTTCGAT+GGG - Chr8:88917977-88917996 MsG0880047628.01.T01:intron 30.0%
AAAGTTGTAATCACATGGTA+TGG + Chr8:88919080-88919099 None:intergenic 30.0%
AAATGCAGATGTGGAAAAAA+GGG - Chr8:88916364-88916383 MsG0880047628.01.T01:CDS 30.0%
AGAAAACACCAAAATCAAGT+AGG - Chr8:88919566-88919585 MsG0880047628.01.T01:intron 30.0%
AGAAAAGAAAAACTTACAGC+AGG + Chr8:88916470-88916489 None:intergenic 30.0%
AGCAAAGAAAATCTTAATGG+AGG + Chr8:88916016-88916035 None:intergenic 30.0%
AGTAAGCTAAAGCAACTTAA+GGG + Chr8:88919773-88919792 None:intergenic 30.0%
ATATGGACTTTGTTAGAGTA+AGG - Chr8:88917456-88917475 MsG0880047628.01.T01:intron 30.0%
ATATGTAGCTGCTTACATTA+TGG + Chr8:88916784-88916803 None:intergenic 30.0%
ATCATTCTTTGTCATTGCAA+TGG - Chr8:88918335-88918354 MsG0880047628.01.T01:CDS 30.0%
ATGACATGAATCTTACTACT+TGG + Chr8:88917650-88917669 None:intergenic 30.0%
ATTACTGCATTGAATTTAGG+TGG + Chr8:88916246-88916265 None:intergenic 30.0%
CAAAGAAAATCTTAATGGAG+GGG + Chr8:88916014-88916033 None:intergenic 30.0%
CAAGAAAGAGTTAATTGCAT+TGG + Chr8:88915566-88915585 None:intergenic 30.0%
CATATGATGAATGGGAATAT+GGG - Chr8:88916327-88916346 MsG0880047628.01.T01:CDS 30.0%
CATCACACTTAATTGCTTAT+TGG + Chr8:88917342-88917361 None:intergenic 30.0%
CATGTAAAATTCTTTAGCTG+AGG + Chr8:88918241-88918260 None:intergenic 30.0%
CTATATACTACTTCAATGGT+GGG - Chr8:88915964-88915983 MsG0880047628.01.T01:intron 30.0%
CTGAACTTGTAATTGCTTAT+TGG - Chr8:88918561-88918580 MsG0880047628.01.T01:intron 30.0%
CTGATGAAGATTGACAATAA+AGG - Chr8:88917765-88917784 MsG0880047628.01.T01:intron 30.0%
GAATGGAACAATTAGGAAAA+TGG + Chr8:88916503-88916522 None:intergenic 30.0%
GATGTTAAGATAGACAGAAT+TGG + Chr8:88920158-88920177 None:intergenic 30.0%
GCAAAGAAAATCTTAATGGA+GGG + Chr8:88916015-88916034 None:intergenic 30.0%
GCAATTAACTCTTTCTTGTT+TGG - Chr8:88915568-88915587 MsG0880047628.01.T01:intron 30.0%
GTTTGTGTTAGTGTTTCATA+GGG + Chr8:88916557-88916576 None:intergenic 30.0%
TAAGCAGCTACATATTAAGT+TGG - Chr8:88916789-88916808 MsG0880047628.01.T01:intron 30.0%
TACCTGATTTACTAGTTATG+TGG - Chr8:88919326-88919345 MsG0880047628.01.T01:intron 30.0%
TAGAAACGTTGTGAAATTCT+TGG - Chr8:88915685-88915704 MsG0880047628.01.T01:intron 30.0%
TATAGCAAAAGTTTGAATGC+AGG - Chr8:88918645-88918664 MsG0880047628.01.T01:intron 30.0%
TCATTTAGTGAAAAGCCTAA+AGG - Chr8:88917798-88917817 MsG0880047628.01.T01:intron 30.0%
TGAAGATTGACAATAAAGGA+AGG - Chr8:88917769-88917788 MsG0880047628.01.T01:intron 30.0%
TGACATGAATCTTACTACTT+GGG + Chr8:88917649-88917668 None:intergenic 30.0%
TGACCTATATACTACTTCAA+TGG - Chr8:88915960-88915979 MsG0880047628.01.T01:intron 30.0%
TGCACAAAGTATAAAGTTGT+TGG + Chr8:88916077-88916096 None:intergenic 30.0%
TGTTTGTGTTAGTGTTTCAT+AGG + Chr8:88916558-88916577 None:intergenic 30.0%
TTATCTCTTCAACGATTACT+GGG - Chr8:88918669-88918688 MsG0880047628.01.T01:intron 30.0%
TTCCTAAATTAGGTTCCAAT+TGG - Chr8:88916828-88916847 MsG0880047628.01.T01:intron 30.0%
TTGAATGTAACAATAAGTGC+CGG - Chr8:88916627-88916646 MsG0880047628.01.T01:CDS 30.0%
TTGACTTAAACTTCTTATCC+AGG - Chr8:88917555-88917574 MsG0880047628.01.T01:intron 30.0%
! ATTTTTCCTAGTAACACTCT+TGG + Chr8:88915463-88915482 None:intergenic 30.0%
! GGAATTTGAGATGTTAATGA+AGG + Chr8:88915252-88915271 None:intergenic 30.0%
! GGTTATGCTGTTTAATACTA+TGG - Chr8:88917315-88917334 MsG0880047628.01.T01:intron 30.0%
! GTGGTTTTCTTAATTGCTTT+AGG + Chr8:88917263-88917282 None:intergenic 30.0%
! TACCATGATAGTGAAAGTTT+CGG + Chr8:88919594-88919613 None:intergenic 30.0%
! TAGGCTTTTCACTAAATGAA+AGG + Chr8:88917797-88917816 None:intergenic 30.0%
! TAGTAGTAGACCATGTATTT+TGG - Chr8:88919415-88919434 MsG0880047628.01.T01:intron 30.0%
! TTGTTTGAACCATTTTACCA+CGG - Chr8:88920031-88920050 MsG0880047628.01.T01:exon 30.0%
!! AAGGTTGTGAAGTTTTGTAA+TGG - Chr8:88915387-88915406 MsG0880047628.01.T01:CDS 30.0%
!! GTTTTGTAATGGAGAAATGA+TGG - Chr8:88915398-88915417 MsG0880047628.01.T01:CDS 30.0%
!! TAGGACATTGATTTCAAACA+CGG - Chr8:88915210-88915229 MsG0880047628.01.T01:three_prime_UTR 30.0%
!! TCTTTGGGATTTCCTAAATT+AGG - Chr8:88916818-88916837 MsG0880047628.01.T01:intron 30.0%
!! TGTAGCTTTTTCTTTAATGC+AGG - Chr8:88917294-88917313 MsG0880047628.01.T01:intron 30.0%
!!! AGGATGTTTTGATTCTTTCT+GGG - Chr8:88917411-88917430 MsG0880047628.01.T01:intron 30.0%
!!! TTTGGCTTGTATTTTGACTA+TGG - Chr8:88915830-88915849 MsG0880047628.01.T01:CDS 30.0%
AACCGAAACTTTCACTATCA+TGG - Chr8:88919589-88919608 MsG0880047628.01.T01:intron 35.0%
AACTACACTATGCTCTATGA+AGG + Chr8:88919196-88919215 None:intergenic 35.0%
AAGTTCACTCAGATAAACCT+TGG + Chr8:88915523-88915542 None:intergenic 35.0%
AATCAATGTCCTACACATGA+AGG + Chr8:88915203-88915222 None:intergenic 35.0%
ACATGAATCTTACTACTTGG+GGG + Chr8:88917647-88917666 None:intergenic 35.0%
ACCACTATGCTTATGATGAA+TGG + Chr8:88916520-88916539 None:intergenic 35.0%
AGCTGATTACTATGAAACTG+AGG - Chr8:88919494-88919513 MsG0880047628.01.T01:intron 35.0%
AGTGAAAGTGAACATTCTAC+TGG + Chr8:88918611-88918630 None:intergenic 35.0%
ATCACTACGCATTTGAAGAT+TGG + Chr8:88915129-88915148 None:intergenic 35.0%
ATCGAAGATTGACAATAGCA+AGG - Chr8:88919007-88919026 MsG0880047628.01.T01:intron 35.0%
ATGAGTAACTGCATCAATAG+TGG - Chr8:88916879-88916898 MsG0880047628.01.T01:intron 35.0%
CAAAACCTATGTACACATCA+AGG - Chr8:88918970-88918989 MsG0880047628.01.T01:intron 35.0%
CAAAGTCCATATAGTCCATA+CGG + Chr8:88917448-88917467 None:intergenic 35.0%
CAAGGTAAAAAGTGGTTTCA+AGG - Chr8:88917186-88917205 MsG0880047628.01.T01:intron 35.0%
CATAGTGGTTGCTTATAGTT+TGG - Chr8:88916531-88916550 MsG0880047628.01.T01:intron 35.0%
CCACCATTGAAGTAGTATAT+AGG + Chr8:88915966-88915985 None:intergenic 35.0%
CCATATGATGAATGGGAATA+TGG - Chr8:88916326-88916345 MsG0880047628.01.T01:CDS 35.0%
CCATATTCCCATTCATCATA+TGG + Chr8:88916329-88916348 None:intergenic 35.0%
CCTATATACTACTTCAATGG+TGG - Chr8:88915963-88915982 MsG0880047628.01.T01:intron 35.0%
CTAAATTAGGTTCCAATTGG+AGG - Chr8:88916831-88916850 MsG0880047628.01.T01:intron 35.0%
CTATTGATGCAGTTACTCAT+TGG + Chr8:88916879-88916898 None:intergenic 35.0%
CTCCAATTGGAACCTAATTT+AGG + Chr8:88916833-88916852 None:intergenic 35.0%
CTGATAAAGAAGGTTTACTG+TGG - Chr8:88918270-88918289 MsG0880047628.01.T01:intron 35.0%
CTTATCTCTTCAACGATTAC+TGG - Chr8:88918668-88918687 MsG0880047628.01.T01:intron 35.0%
GACAGAATTGGGATATAAGA+TGG + Chr8:88920146-88920165 None:intergenic 35.0%
GACATGAATCTTACTACTTG+GGG + Chr8:88917648-88917667 None:intergenic 35.0%
GAGTAAGCTAAAGCAACTTA+AGG + Chr8:88919774-88919793 None:intergenic 35.0%
GGGAGCAAAGAAAATCTTAA+TGG + Chr8:88916019-88916038 None:intergenic 35.0%
GTATCAGTGCTACATAAGTT+TGG - Chr8:88916687-88916706 MsG0880047628.01.T01:intron 35.0%
TAAAATTCTTTAGCTGAGGC+AGG + Chr8:88918237-88918256 None:intergenic 35.0%
TACCATCAGATCATTCTTTG+AGG - Chr8:88918702-88918721 MsG0880047628.01.T01:intron 35.0%
TCACTACGCATTTGAAGATT+GGG + Chr8:88915128-88915147 None:intergenic 35.0%
TCCATTCATCATAAGCATAG+TGG - Chr8:88916516-88916535 MsG0880047628.01.T01:intron 35.0%
TCGTAAAAGCTAAACTTGGA+TGG + Chr8:88918945-88918964 None:intergenic 35.0%
TGAGTAACTGCATCAATAGT+GGG - Chr8:88916880-88916899 MsG0880047628.01.T01:intron 35.0%
TGCATCGTAAAAGCTAAACT+TGG + Chr8:88918949-88918968 None:intergenic 35.0%
TGCCACATAACTAGTAAATC+AGG + Chr8:88919331-88919350 None:intergenic 35.0%
TGCTAATTGAATCAACTGCA+GGG - Chr8:88919892-88919911 MsG0880047628.01.T01:CDS 35.0%
TGTGGCAAGTCTCAATTTAT+AGG - Chr8:88919344-88919363 MsG0880047628.01.T01:intron 35.0%
TTCATAGAGCATAGTGTAGT+TGG - Chr8:88919195-88919214 MsG0880047628.01.T01:intron 35.0%
TTTCCAACTGCAAATGACTT+TGG - Chr8:88918198-88918217 MsG0880047628.01.T01:intron 35.0%
TTTCCACCAGCAAAAACTTT+AGG + Chr8:88919379-88919398 None:intergenic 35.0%
TTTCTCCTTGATGTGTACAT+AGG + Chr8:88918978-88918997 None:intergenic 35.0%
! ACGTTTTTCATTTCCTTGAC+AGG + Chr8:88916717-88916736 None:intergenic 35.0%
! ATTCCTAAAGTTTTTGCTGG+TGG - Chr8:88919373-88919392 MsG0880047628.01.T01:intron 35.0%
! CGTTTTTCATTTCCTTGACA+GGG + Chr8:88916716-88916735 None:intergenic 35.0%
! GAAGGTATGACTGATAAAGA+AGG - Chr8:88918260-88918279 MsG0880047628.01.T01:intron 35.0%
! GTGTTTTCTCCTATTCCTAT+TGG + Chr8:88919555-88919574 None:intergenic 35.0%
! TTCAAATTGAAAGCGTGCTA+GGG + Chr8:88916667-88916686 None:intergenic 35.0%
! TTGCTATTGTCAATCTTCGA+TGG + Chr8:88919008-88919027 None:intergenic 35.0%
! TTTCGGTTCCTACTTGATTT+TGG + Chr8:88919577-88919596 None:intergenic 35.0%
!!! GAGGATGTTTTGATTCTTTC+TGG - Chr8:88917410-88917429 MsG0880047628.01.T01:intron 35.0%
!!! GGATGTTTTGATTCTTTCTG+GGG - Chr8:88917412-88917431 MsG0880047628.01.T01:intron 35.0%
AAACACGGACAAGAAGACAA+AGG - Chr8:88915225-88915244 MsG0880047628.01.T01:three_prime_UTR 40.0%
AAGCTAAAGCAACTTAAGGG+TGG + Chr8:88919770-88919789 None:intergenic 40.0%
AAGTGTGCTTGTTCTGTTTC+AGG - Chr8:88917134-88917153 MsG0880047628.01.T01:intron 40.0%
AATCACATGGTATGGAGAGT+AGG + Chr8:88919072-88919091 None:intergenic 40.0%
ACTACACAACCTTCATGTGT+AGG - Chr8:88915191-88915210 MsG0880047628.01.T01:three_prime_UTR 40.0%
ACTCCCATCGAAGCAATATA+TGG + Chr8:88917983-88918002 None:intergenic 40.0%
AGGCTGATAGATCATCAGAA+GGG - Chr8:88919923-88919942 MsG0880047628.01.T01:CDS 40.0%
ATCAACGAGCTGCATAAGAA+AGG + Chr8:88919139-88919158 None:intergenic 40.0%
ATCACATGGTATGGAGAGTA+GGG + Chr8:88919071-88919090 None:intergenic 40.0%
ATGGAGAGTAGGGATACAAA+GGG + Chr8:88919061-88919080 None:intergenic 40.0%
ATTCCCATGCACACTGAAAT+GGG + Chr8:88916039-88916058 None:intergenic 40.0%
ATTCTTCGAAAGACCGAGAA+CGG + Chr8:88917945-88917964 None:intergenic 40.0%
CATCCTAAGTCAGCTTATGT+GGG - Chr8:88917057-88917076 MsG0880047628.01.T01:intron 40.0%
CTATTGTCAATCTTCGATGG+TGG + Chr8:88919005-88919024 None:intergenic 40.0%
CTGCTTCATGATTTAGCAAG+TGG - Chr8:88917913-88917932 MsG0880047628.01.T01:CDS 40.0%
GAACATTCTACTGGATGCAA+AGG + Chr8:88918602-88918621 None:intergenic 40.0%
GATCCAAAGTCATTTGCAGT+TGG + Chr8:88918204-88918223 None:intergenic 40.0%
GATGCATACTGTCACAACAT+AGG + Chr8:88918318-88918337 None:intergenic 40.0%
GCAGTTGAAAAATGCAGATG+TGG - Chr8:88916355-88916374 MsG0880047628.01.T01:CDS 40.0%
GGAAGAGTTCCAATAGGAAT+AGG - Chr8:88919543-88919562 MsG0880047628.01.T01:intron 40.0%
GGCAGAAAGTTGTAATCACA+TGG + Chr8:88919085-88919104 None:intergenic 40.0%
GTGCTAATTGAATCAACTGC+AGG - Chr8:88919891-88919910 MsG0880047628.01.T01:CDS 40.0%
TATGGAGAGTAGGGATACAA+AGG + Chr8:88919062-88919081 None:intergenic 40.0%
TCCTCAAATCCGTGGTAAAA+TGG + Chr8:88920043-88920062 None:intergenic 40.0%
TGACGCTAACACGTAGATAT+TGG - Chr8:88916584-88916603 MsG0880047628.01.T01:intron 40.0%
TGATAGCATTATCTGACCAC+TGG + Chr8:88915319-88915338 None:intergenic 40.0%
TGCAAATGACTTTGGATCAG+AGG - Chr8:88918206-88918225 MsG0880047628.01.T01:intron 40.0%
TGCAATATGTCTGTTGAGTG+AGG + Chr8:88916943-88916962 None:intergenic 40.0%
TGCATTGAATTTAGGTGGCT+TGG + Chr8:88916241-88916260 None:intergenic 40.0%
TGCCTCAAAGAATGATCTGA+TGG + Chr8:88918707-88918726 None:intergenic 40.0%
TGTTGTCATAGCAAACTCAG+AGG - Chr8:88919704-88919723 MsG0880047628.01.T01:intron 40.0%
TTTCAATACAACAGTGACGC+CGG + Chr8:88919962-88919981 None:intergenic 40.0%
! ACCATTTTACCACGGATTTG+AGG - Chr8:88920039-88920058 MsG0880047628.01.T01:five_prime_UTR 40.0%
! CACAACCTTCAAGTTTCTAC+TGG + Chr8:88915376-88915395 None:intergenic 40.0%
! CTTCAAATTGAAAGCGTGCT+AGG + Chr8:88916668-88916687 None:intergenic 40.0%
! TAGGGTTTGGTTAGTAACAC+CGG + Chr8:88916649-88916668 None:intergenic 40.0%
! TTTTCATGAAGTAGGATCCC+AGG - Chr8:88917375-88917394 MsG0880047628.01.T01:intron 40.0%
!! ACTTCAATGGTGGGTTACTT+GGG - Chr8:88915973-88915992 MsG0880047628.01.T01:intron 40.0%
!! TACTTCAATGGTGGGTTACT+TGG - Chr8:88915972-88915991 MsG0880047628.01.T01:intron 40.0%
!! TTCCAATTGGAGGTGCTTAT+AGG - Chr8:88916841-88916860 MsG0880047628.01.T01:intron 40.0%
AACGATTACTGGGAGGACAT+AGG - Chr8:88918679-88918698 MsG0880047628.01.T01:intron 45.0%
ACAGTCGTGGCAGTTATACT+TGG - Chr8:88916395-88916414 MsG0880047628.01.T01:intron 45.0%
AGCCTATAAGCACCTCCAAT+TGG + Chr8:88916846-88916865 None:intergenic 45.0%
ATAACTGCCACGACTGTACT+TGG + Chr8:88916392-88916411 None:intergenic 45.0%
ATACAGGACACAGTGATGCT+TGG - Chr8:88919471-88919490 MsG0880047628.01.T01:intron 45.0%
ATCCTCAATATCCTTGCTCC+TGG + Chr8:88917396-88917415 None:intergenic 45.0%
ATTGCACGTGCTTACAACTC+CGG - Chr8:88916957-88916976 MsG0880047628.01.T01:intron 45.0%
CAAGTGGATACAACCGTTCT+CGG - Chr8:88917929-88917948 MsG0880047628.01.T01:intron 45.0%
CACTCTTTCTTGTCTGCCAA+TGG - Chr8:88917603-88917622 MsG0880047628.01.T01:intron 45.0%
CAGGGGAACAAGGTAAAAAG+TGG - Chr8:88917178-88917197 MsG0880047628.01.T01:intron 45.0%
CATTCCCATGCACACTGAAA+TGG + Chr8:88916040-88916059 None:intergenic 45.0%
CATTTCAGTGTGCATGGGAA+TGG - Chr8:88916038-88916057 MsG0880047628.01.T01:intron 45.0%
CCATATAGTCCATACGGTAG+AGG + Chr8:88917442-88917461 None:intergenic 45.0%
CTATGAAACTGAGGCAGAAG+TGG - Chr8:88919503-88919522 MsG0880047628.01.T01:intron 45.0%
CTTAGTTAGAGGGAAGAGAC+GGG + Chr8:88916435-88916454 None:intergenic 45.0%
CTTCATCAGACCGAAATCTG+AGG + Chr8:88917754-88917773 None:intergenic 45.0%
GAGCAAACAAGCTTGGCAAT+AGG + Chr8:88918146-88918165 None:intergenic 45.0%
GAGGCTGATAGATCATCAGA+AGG - Chr8:88919922-88919941 MsG0880047628.01.T01:CDS 45.0%
GATACTCACATGCTCAGTGA+GGG + Chr8:88918737-88918756 None:intergenic 45.0%
GCATCCTAAGTCAGCTTATG+TGG - Chr8:88917056-88917075 MsG0880047628.01.T01:intron 45.0%
GCTTAGTTAGAGGGAAGAGA+CGG + Chr8:88916436-88916455 None:intergenic 45.0%
GGTGACCAGTAGAAACTTGA+AGG - Chr8:88915368-88915387 MsG0880047628.01.T01:CDS 45.0%
TAAGTTTGGTCACCCTGTCA+AGG - Chr8:88916701-88916720 MsG0880047628.01.T01:intron 45.0%
TACTTGGGTCCACTGTATCA+AGG - Chr8:88915988-88916007 MsG0880047628.01.T01:intron 45.0%
TAGCTGCTTATGGAGATGCT+AGG - Chr8:88918456-88918475 MsG0880047628.01.T01:CDS 45.0%
TCCTCAATATCCTTGCTCCT+GGG + Chr8:88917395-88917414 None:intergenic 45.0%
TCTCTTCAACGATTACTGGG+AGG - Chr8:88918672-88918691 MsG0880047628.01.T01:intron 45.0%
TGATACTCACATGCTCAGTG+AGG + Chr8:88918738-88918757 None:intergenic 45.0%
TTGCTCGTCGCTTAGTTAGA+GGG + Chr8:88916445-88916464 None:intergenic 45.0%
TTTCTACTGGTCACCATTCC+TGG + Chr8:88915363-88915382 None:intergenic 45.0%
TTTGCTCGTCGCTTAGTTAG+AGG + Chr8:88916446-88916465 None:intergenic 45.0%
! AACACTCTTGGTGCAACCAT+TGG + Chr8:88915451-88915470 None:intergenic 45.0%
! ACACCCACATAAGCTGACTT+AGG + Chr8:88917063-88917082 None:intergenic 45.0%
! ATTGAAAGCGTGCTAGGGTT+TGG + Chr8:88916662-88916681 None:intergenic 45.0%
! CCTCTACCGTATGGACTATA+TGG - Chr8:88917439-88917458 MsG0880047628.01.T01:intron 45.0%
! GAAGGGTTTTACATCCGTTC+CGG - Chr8:88919940-88919959 MsG0880047628.01.T01:CDS 45.0%
! TAGCACTGAGCAAACAAGCT+TGG + Chr8:88918153-88918172 None:intergenic 45.0%
!! CACTTTTTACCTTGTTCCCC+TGG + Chr8:88917180-88917199 None:intergenic 45.0%
!! GTTGCACCAAGAGTGTTACT+AGG - Chr8:88915454-88915473 MsG0880047628.01.T01:intron 45.0%
!!! CTGCCATTTTTTCCGATCAC+CGG + Chr8:88915290-88915309 None:intergenic 45.0%
AAAATGGCAGTCTCTGCCAG+TGG - Chr8:88915300-88915319 MsG0880047628.01.T01:three_prime_UTR 50.0%
AAAGCTCGTCCTCAAATCCG+TGG + Chr8:88920051-88920070 None:intergenic 50.0%
AAGGGATCCAAGTACAGTCG+TGG - Chr8:88916382-88916401 MsG0880047628.01.T01:intron 50.0%
ACTCAAACTCCAGGGGAACA+AGG - Chr8:88917168-88917187 MsG0880047628.01.T01:intron 50.0%
AGGAGCAGAGCTCAAAGCAA+TGG - Chr8:88917818-88917837 MsG0880047628.01.T01:intron 50.0%
ATACAACAGTGACGCCGGAA+CGG + Chr8:88919957-88919976 None:intergenic 50.0%
ATCCAGGATCATCGAGAGAG+CGG - Chr8:88917571-88917590 MsG0880047628.01.T01:intron 50.0%
CACATCAGCAGTGAGAGACA+TGG + Chr8:88915490-88915509 None:intergenic 50.0%
CATGTCTCTCACTGCTGATG+TGG - Chr8:88915488-88915507 MsG0880047628.01.T01:intron 50.0%
CTTGTCTGCCAATGGATGAC+AGG - Chr8:88917611-88917630 MsG0880047628.01.T01:intron 50.0%
GAGCTTCATGCTGCTACCAA+TGG - Chr8:88915432-88915451 MsG0880047628.01.T01:intron 50.0%
GCAACCTACCTGTCATCCAT+TGG + Chr8:88917622-88917641 None:intergenic 50.0%
GCTCCCATTTCAGTGTGCAT+GGG - Chr8:88916033-88916052 MsG0880047628.01.T01:intron 50.0%
GCTGAGGGAAGAGTTCCAAT+AGG - Chr8:88919537-88919556 MsG0880047628.01.T01:intron 50.0%
GTCGTGGCAGTTATACTTGG+TGG - Chr8:88916398-88916417 MsG0880047628.01.T01:intron 50.0%
TATAGCCGCGCCTCAGATTT+CGG - Chr8:88917741-88917760 MsG0880047628.01.T01:intron 50.0%
TCCCAGGAGCAAGGATATTG+AGG - Chr8:88917391-88917410 MsG0880047628.01.T01:intron 50.0%
TCCGAAAGTGACTCCAGTAC+CGG + Chr8:88916979-88916998 None:intergenic 50.0%
TCGCCGGTGATCGGAAAAAA+TGG - Chr8:88915284-88915303 MsG0880047628.01.T01:three_prime_UTR 50.0%
TCTGCCAATGGATGACAGGT+AGG - Chr8:88917615-88917634 MsG0880047628.01.T01:intron 50.0%
TGATGTGGCTAGCGAATCCA+AGG - Chr8:88915503-88915522 MsG0880047628.01.T01:intron 50.0%
TGCTCCCATTTCAGTGTGCA+TGG - Chr8:88916032-88916051 MsG0880047628.01.T01:intron 50.0%
TTGCCGCAACTCAAACTCCA+GGG - Chr8:88917160-88917179 MsG0880047628.01.T01:intron 50.0%
TTTCGGAGATGGCTATGTCG+AGG - Chr8:88916992-88917011 MsG0880047628.01.T01:intron 50.0%
! AATCTGAGGCGCGGCTATAA+TGG + Chr8:88917740-88917759 None:intergenic 50.0%
! ACTGGAGTCACTTTCGGAGA+TGG - Chr8:88916981-88917000 MsG0880047628.01.T01:intron 50.0%
! GCTTTGAGCTCTGCTCCTTT+AGG + Chr8:88917816-88917835 None:intergenic 50.0%
! GGGAGTGTACGTCTTCAAGA+AGG - Chr8:88917997-88918016 MsG0880047628.01.T01:intron 50.0%
! GTGGCAGTTATACTTGGTGG+AGG - Chr8:88916401-88916420 MsG0880047628.01.T01:intron 50.0%
! GTTATACTTGGTGGAGGAGC+TGG - Chr8:88916407-88916426 MsG0880047628.01.T01:intron 50.0%
! TCAACTGCAGGGAGTACAAG+AGG - Chr8:88919903-88919922 MsG0880047628.01.T01:CDS 50.0%
! TCCGGTACTGGAGTCACTTT+CGG - Chr8:88916975-88916994 MsG0880047628.01.T01:intron 50.0%
! TTCCCATTTTGTCCCTTCGC+CGG - Chr8:88915268-88915287 MsG0880047628.01.T01:three_prime_UTR 50.0%
! TTTTTCCGATCACCGGCGAA+GGG + Chr8:88915283-88915302 None:intergenic 50.0%
!! AAGGTACTGCTGATGCTGTG+CGG - Chr8:88917205-88917224 MsG0880047628.01.T01:intron 50.0%
!! GCAGTTTCACTGGCTCTTTG+AGG - Chr8:88917227-88917246 MsG0880047628.01.T01:intron 50.0%
!! TTCCCCTGGAGTTTGAGTTG+CGG + Chr8:88917166-88917185 None:intergenic 50.0%
!!! TTTTTTCCGATCACCGGCGA+AGG + Chr8:88915284-88915303 None:intergenic 50.0%
AGTGGCAGCACAGTTAGCTG+AGG - Chr8:88919521-88919540 MsG0880047628.01.T01:intron 55.0%
ATGCTGTGCGGCAGTTTCAC+TGG - Chr8:88917217-88917236 MsG0880047628.01.T01:intron 55.0%
ATGGAGGGGCCTTGATACAG+TGG + Chr8:88916000-88916019 None:intergenic 55.0%
CACCGGCGAAGGGACAAAAT+GGG + Chr8:88915273-88915292 None:intergenic 55.0%
CGTGCTTACAACTCCGGTAC+TGG - Chr8:88916963-88916982 MsG0880047628.01.T01:intron 55.0%
CTTGCCGCAACTCAAACTCC+AGG - Chr8:88917159-88917178 MsG0880047628.01.T01:intron 55.0%
GAAGTAGGATCCCAGGAGCA+AGG - Chr8:88917382-88917401 MsG0880047628.01.T01:intron 55.0%
GTGGCAGCACAGTTAGCTGA+GGG - Chr8:88919522-88919541 MsG0880047628.01.T01:intron 55.0%
TCACCGGCGAAGGGACAAAA+TGG + Chr8:88915274-88915293 None:intergenic 55.0%
TCAGCTACGTGAGCCAGGAA+TGG - Chr8:88915347-88915366 MsG0880047628.01.T01:CDS 55.0%
TCCTGGCTCACGTAGCTGAA+CGG + Chr8:88915346-88915365 None:intergenic 55.0%
TGCCGCAACTCAAACTCCAG+GGG - Chr8:88917161-88917180 MsG0880047628.01.T01:intron 55.0%
TGGGGATCACCTCTACCGTA+TGG - Chr8:88917430-88917449 MsG0880047628.01.T01:intron 55.0%
TTTGTCCCTTCGCCGGTGAT+CGG - Chr8:88915275-88915294 MsG0880047628.01.T01:three_prime_UTR 55.0%
! TCAGACCGAAATCTGAGGCG+CGG + Chr8:88917749-88917768 None:intergenic 55.0%
ACCGTTCAGCTACGTGAGCC+AGG - Chr8:88915342-88915361 MsG0880047628.01.T01:CDS 60.0%
CACCGCTCTCTCGATGATCC+TGG + Chr8:88917576-88917595 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 88915121 88920213 88915121 ID=MsG0880047628.01;Name=MsG0880047628.01
Chr8 mRNA 88915121 88920213 88915121 ID=MsG0880047628.01.T01;Parent=MsG0880047628.01;Name=MsG0880047628.01.T01;_AED=0.33;_eAED=0.33;_QI=182|0.91|1|1|1|1|13|199|452
Chr8 exon 88915121 88915421 88915121 ID=MsG0880047628.01.T01:exon:2420;Parent=MsG0880047628.01.T01
Chr8 exon 88915609 88915669 88915609 ID=MsG0880047628.01.T01:exon:2419;Parent=MsG0880047628.01.T01
Chr8 exon 88915751 88915857 88915751 ID=MsG0880047628.01.T01:exon:2418;Parent=MsG0880047628.01.T01
Chr8 exon 88916080 88916184 88916080 ID=MsG0880047628.01.T01:exon:2417;Parent=MsG0880047628.01.T01
Chr8 exon 88916306 88916392 88916306 ID=MsG0880047628.01.T01:exon:2416;Parent=MsG0880047628.01.T01
Chr8 exon 88916587 88916667 88916587 ID=MsG0880047628.01.T01:exon:2415;Parent=MsG0880047628.01.T01
Chr8 exon 88917071 88917143 88917071 ID=MsG0880047628.01.T01:exon:2414;Parent=MsG0880047628.01.T01
Chr8 exon 88917702 88917757 88917702 ID=MsG0880047628.01.T01:exon:2413;Parent=MsG0880047628.01.T01
Chr8 exon 88917862 88917945 88917862 ID=MsG0880047628.01.T01:exon:2412;Parent=MsG0880047628.01.T01
Chr8 exon 88918086 88918178 88918086 ID=MsG0880047628.01.T01:exon:2411;Parent=MsG0880047628.01.T01
Chr8 exon 88918321 88918494 88918321 ID=MsG0880047628.01.T01:exon:2410;Parent=MsG0880047628.01.T01
Chr8 exon 88918862 88918975 88918862 ID=MsG0880047628.01.T01:exon:2409;Parent=MsG0880047628.01.T01
Chr8 exon 88919810 88920213 88919810 ID=MsG0880047628.01.T01:exon:2408;Parent=MsG0880047628.01.T01
Chr8 five_prime_UTR 88920032 88920213 88920032 ID=MsG0880047628.01.T01:five_prime_utr;Parent=MsG0880047628.01.T01
Chr8 CDS 88919810 88920031 88919810 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88918862 88918975 88918862 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88918321 88918494 88918321 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88918086 88918178 88918086 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88917862 88917945 88917862 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88917702 88917757 88917702 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88917071 88917143 88917071 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88916587 88916667 88916587 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88916306 88916392 88916306 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88916080 88916184 88916080 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88915751 88915857 88915751 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88915609 88915669 88915609 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 CDS 88915320 88915421 88915320 ID=MsG0880047628.01.T01:cds;Parent=MsG0880047628.01.T01
Chr8 three_prime_UTR 88915121 88915319 88915121 ID=MsG0880047628.01.T01:three_prime_utr;Parent=MsG0880047628.01.T01
Gene Sequence

>MsG0880047628.01.T01

ATGGCAGTCTCTGCCAGTGGTCAGATAATGCTATCATCTACCGTTCAGCTACGTGAGCCAGGAATGGTGACCAGTAGAAACTTGAAGGTTGTGAAGTTTTGTAATGGAGAAATGATGGGACGAAAGATTGAGCTTCATGCTGCTACCAATGGTTGCACCAAGAGTGTTACTAGGAAAAATATATCCATGTCTCTCACTGCTGATGTGGCTAGCGAATCCAAGTTGAAAAATGCAGATGTGGAAAAAAGGGATCCAAGTACAGTCGTGGCAGTTATACTTGGTGGAGGAGCTGGCACCCGTCTCTTCCCTCTAACTAAGCGACGAGCAAAGCCTGCTGTTCCAATTGGAGGTGCTTATAGGCTGATTGATGTGCCAATGAGTAACTGCATCAATAGTGGGATCAACAAAGTGTATATTCTCACTCAGTTTAATTCAGCCTCACTCAACAGACATATTGCACGTGCTTACAACTCCGGTACTGGAGTCACTTTCGGAGATGGCTATGTCGAGGTTCTTGCCGCAACTCAAACTCCAGGGGAACAAGGTAAAAAGTGGTTTCAAGGTACTGCTGATGCTGTGCGGCAGTTTCACTGGCTCTTTGAGGATCCCAGGAGCAAGGATATTGAGGATGTTTTGATTCTTTCTGGGGATCACCTCTACCGTATGGACTATATGGACTTTGTTAGAGATCATCGAGAGAGCGGTGCAGATATCACTCTTTCTTGTCTGCCAATGGATGACAGATGGCGCTTTCCAACTGCAAATGACTTTGGATCAGAGGTCATTCCTGCCTCAGCTAAAGAATTTTACATGAAGGCTTATCTCTTCAACGATTACTGGGAGGACATAGGTACCATCAGATCATTCTTTGAGGCAAATCTAGCCCTCACTGAGCATCCATCCAAGTTTAGCTTTTACGATGCAGCAAAACCTATGTACACATCAAGGAGAAATTTACCACCATCGAAGATTGACAATAGCAAGCTCGTTGATTCAATTATATCACATGGAAGCTTCGTGAATAATGCCTTCATAGAGCATAGTGTAGTTGGAATCAGATCAAGAATAAACTCAAATGTTCATTTAAAGGACACAGTGATGCTTGGAGCTGATTACTATGAAACTGAGGCAGAAGTGGCAGCACAGTTAGCTGAGGGAAGAGTTCCAATAGGAATAGGAGAAAACACCAAAATCAAAGACTGTATTATTGACAAAAATGCTAGAATTGGAAAGAATGTTGTCATAGCAAACTCAGAGGGAGTACAAGAGGCTGATAGATCATCAGAAGGGTTTTACATCCGTTCCGGCGTCACTGTTGTATTGAAAAATTCAACAATTGAAGACGGGCTCGTCATATAA

Protein sequence

>MsG0880047628.01.T01

MAVSASGQIMLSSTVQLREPGMVTSRNLKVVKFCNGEMMGRKIELHAATNGCTKSVTRKNISMSLTADVASESKLKNADVEKRDPSTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNSGTGVTFGDGYVEVLAATQTPGEQGKKWFQGTADAVRQFHWLFEDPRSKDIEDVLILSGDHLYRMDYMDFVRDHRESGADITLSCLPMDDRWRFPTANDFGSEVIPASAKEFYMKAYLFNDYWEDIGTIRSFFEANLALTEHPSKFSFYDAAKPMYTSRRNLPPSKIDNSKLVDSIISHGSFVNNAFIEHSVVGIRSRINSNVHLKDTVMLGADYYETEAEVAAQLAEGRVPIGIGENTKIKDCIIDKNARIGKNVVIANSEGVQEADRSSEGFYIRSGVTVVLKNSTIEDGLVI*