AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022295.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022295.01.T01 MTR_4g087540 80.519 154 21 2 1 154 1 145 1.37e-57 177
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022295.01.T01 AT1G21500 71.795 39 11 0 111 149 77 115 4.06e-11 57.8

Find 21 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGCTATATGTTTGTTTAT+TGG 0.224364 4:+70776222 None:intergenic
AATAAATAAAATCTGAGTTT+TGG 0.300739 4:+70776250 None:intergenic
AGAGAGAGCTGTTGCGGCTG+TGG 0.463269 4:+70776130 None:intergenic
ATATAGGGAAGAGCTATTCC+AGG 0.478288 4:+70776100 None:intergenic
TTGGCAACCAAAGTCAAAAC+AGG 0.491978 4:-70776034 MsG0480022295.01.T01:exon
AGCTGAAACCAGTCAAATCA+TGG 0.495901 4:-70776177 MsG0480022295.01.T01:exon
TTGCCAATGCAGTTCACTCT+AGG 0.510300 4:+70776050 None:intergenic
GAGAAGTCTAAGAAACAAGA+AGG 0.513958 4:+70776203 None:intergenic
AGAGCTGTTGCGGCTGTGGT+AGG 0.530049 4:+70776134 None:intergenic
CAGCTCTCTCTGTGAGACCC+TGG 0.543258 4:-70776118 MsG0480022295.01.T01:exon
CAAATGAACCATGATTTGAC+TGG 0.573306 4:+70776169 None:intergenic
GTTGCGGCTGTGGTAGGAGT+CGG 0.573799 4:+70776140 None:intergenic
ATGCAGACTGTGATCATCAC+TGG 0.577253 4:+70775984 None:intergenic
ACTCCTAGAGTGAACTGCAT+TGG 0.585381 4:-70776053 MsG0480022295.01.T01:exon
GTGATGATCACAGTCTGCAT+CGG 0.615702 4:-70775981 MsG0480022295.01.T01:exon
ATGATCACAGTCTGCATCGG+AGG 0.618651 4:-70775978 MsG0480022295.01.T01:intron
TATAGGGAAGAGCTATTCCA+GGG 0.632027 4:+70776101 None:intergenic
TCTCACAGAGAGAGCTGTTG+CGG 0.634930 4:+70776124 None:intergenic
CTGTGATCATCACTGGTAGG+AGG 0.637221 4:+70775991 None:intergenic
AGACTGTGATCATCACTGGT+AGG 0.657088 4:+70775988 None:intergenic
AATGCAGTTCACTCTAGGAG+TGG 0.670891 4:+70776055 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTCAAATAAATACA+TGG - Chr4:70775727-70775746 MsG0480022295.01.T01:CDS 10.0%
!! TACATTAAATAATTATGTAT+TGG + Chr4:70775032-70775051 None:intergenic 10.0%
!! TTATAAATAAATAGGATAAA+GGG - Chr4:70774844-70774863 MsG0480022295.01.T01:intron 10.0%
!!! CATGTTTTTAATAAAAAAAT+GGG + Chr4:70774534-70774553 None:intergenic 10.0%
!!! TCATGTTTTTAATAAAAAAA+TGG + Chr4:70774535-70774554 None:intergenic 10.0%
!! GTTACAAATAAATAAGATAA+AGG + Chr4:70774433-70774452 None:intergenic 15.0%
!! GTTATAAATAAATAGGATAA+AGG - Chr4:70774843-70774862 MsG0480022295.01.T01:intron 15.0%
!! TAATACATGTATATTTGTAT+GGG - Chr4:70774389-70774408 MsG0480022295.01.T01:intron 15.0%
!! TCCAAATGTTATAAATAAAT+AGG - Chr4:70774836-70774855 MsG0480022295.01.T01:intron 15.0%
!! TCCTATTTATTTATAACATT+TGG + Chr4:70774840-70774859 None:intergenic 15.0%
!! TTAATAAAAAAATGGGAATA+AGG + Chr4:70774527-70774546 None:intergenic 15.0%
!!! AAATAATTATGTATTGGTTT+AGG + Chr4:70775026-70775045 None:intergenic 15.0%
!!! AATAAATAAAATCTGAGTTT+TGG + Chr4:70773224-70773243 None:intergenic 15.0%
!!! GTTTTTATATATTTTCTAGA+AGG + Chr4:70774368-70774387 None:intergenic 15.0%
!!! TAAATAAAGTACCTATTTAA+AGG + Chr4:70775455-70775474 None:intergenic 15.0%
!! AAAACGTGTAAAAATATCAA+AGG - Chr4:70775412-70775431 MsG0480022295.01.T01:intron 20.0%
!! AAAATTAAGATTATCCTATG+TGG - Chr4:70774741-70774760 MsG0480022295.01.T01:intron 20.0%
!! AATAAGAAGTAAGAAAAACA+AGG - Chr4:70775593-70775612 MsG0480022295.01.T01:CDS 20.0%
!! AATATGTTCATATCATTTCT+TGG - Chr4:70774685-70774704 MsG0480022295.01.T01:intron 20.0%
!! AGCGTGTTTATAATAAAAAA+TGG - Chr4:70774775-70774794 MsG0480022295.01.T01:intron 20.0%
!! ATATGTTCATATCATTTCTT+GGG - Chr4:70774686-70774705 MsG0480022295.01.T01:intron 20.0%
!! CATACAAATATACATGTATT+AGG + Chr4:70774390-70774409 None:intergenic 20.0%
!! CTAATACATGTATATTTGTA+TGG - Chr4:70774388-70774407 MsG0480022295.01.T01:intron 20.0%
!! GTTATTATGTCTTATCTTTA+TGG - Chr4:70776117-70776136 MsG0480022295.01.T01:exon 20.0%
!! TAAAAGATAAAAGACTTGAT+CGG + Chr4:70774486-70774505 None:intergenic 20.0%
!! TAATAACATACATGTTGAAA+TGG + Chr4:70776104-70776123 None:intergenic 20.0%
!! TTGTTAGAAACAAAATCAAA+TGG + Chr4:70775777-70775796 None:intergenic 20.0%
!!! ATAGAATCTTAAGTTGAAAA+AGG + Chr4:70774195-70774214 None:intergenic 20.0%
!!! TTGTTTTTCTTACTTCTTAT+TGG + Chr4:70775594-70775613 None:intergenic 20.0%
! AAAAGATAAAAGACTTGATC+GGG + Chr4:70774485-70774504 None:intergenic 25.0%
! AAACCTTATCAAATGTCTTA+AGG - Chr4:70775316-70775335 MsG0480022295.01.T01:intron 25.0%
! AACATTCTTGACAATAAGAT+GGG + Chr4:70774101-70774120 None:intergenic 25.0%
! AAGGCTATATGTTTGTTTAT+TGG + Chr4:70773252-70773271 None:intergenic 25.0%
! ACAAAACCAAAACCAATATT+TGG + Chr4:70776198-70776217 None:intergenic 25.0%
! ATCAAATCAATGTCTTTCAT+GGG - Chr4:70774908-70774927 MsG0480022295.01.T01:intron 25.0%
! CAATTAAGAACATCAATGAA+GGG + Chr4:70774144-70774163 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG - Chr4:70775060-70775079 MsG0480022295.01.T01:intron 25.0%
! TAACATTCTTGACAATAAGA+TGG + Chr4:70774102-70774121 None:intergenic 25.0%
! TCAATTAAGAACATCAATGA+AGG + Chr4:70774145-70774164 None:intergenic 25.0%
! TGTTCAAGAAATTATTGAGT+TGG - Chr4:70774281-70774300 MsG0480022295.01.T01:intron 25.0%
! TTATGTCTTATCTTTATGGT+TGG - Chr4:70776121-70776140 MsG0480022295.01.T01:exon 25.0%
! TTTGGATGAGTAAAATTAGA+AGG + Chr4:70774229-70774248 None:intergenic 25.0%
!! AGTATTGTACTCTTTTTATC+TGG - Chr4:70773175-70773194 MsG0480022295.01.T01:exon 25.0%
!! CTCTACAACTTTTACATAAT+GGG - Chr4:70774331-70774350 MsG0480022295.01.T01:intron 25.0%
!! CTTCTTTTAGTCCTTTAAAT+AGG - Chr4:70775441-70775460 MsG0480022295.01.T01:exon 25.0%
!! GTCAATTTTCTCTTGTAAAT+AGG + Chr4:70774963-70774982 None:intergenic 25.0%
!! GTGTATGTTTTACAAGATAA+GGG - Chr4:70774813-70774832 MsG0480022295.01.T01:intron 25.0%
!! TGTGTATGTTTTACAAGATA+AGG - Chr4:70774812-70774831 MsG0480022295.01.T01:intron 25.0%
!!! AAATAAAATCTGAGTTTTGG+TGG + Chr4:70773221-70773240 None:intergenic 25.0%
!!! AACCATTTTTTGACAACTTT+TGG - Chr4:70775494-70775513 MsG0480022295.01.T01:exon 25.0%
!!! AACTAGTCTAGTACATTTTT+TGG + Chr4:70774247-70774266 None:intergenic 25.0%
!!! ACACATTTTTCGAAGAATAT+AGG + Chr4:70773390-70773409 None:intergenic 25.0%
!!! CACATTTTTCGAAGAATATA+GGG + Chr4:70773389-70773408 None:intergenic 25.0%
!!! TTTACATAATGGGTACTATA+AGG - Chr4:70774341-70774360 MsG0480022295.01.T01:intron 25.0%
AAAAGTTGTAGAGCTAAACT+TGG + Chr4:70774324-70774343 None:intergenic 30.0%
AAATACACCTCTAAATAGCA+TGG + Chr4:70774598-70774617 None:intergenic 30.0%
AACAATAGAGAGAGAGAAAA+AGG + Chr4:70775566-70775585 None:intergenic 30.0%
AACAATGTATGTATCTAGTC+AGG - Chr4:70774998-70775017 MsG0480022295.01.T01:intron 30.0%
AACTGGTTGTACTTAAAAAC+CGG + Chr4:70776244-70776263 None:intergenic 30.0%
AGAAGAAGAAGAAGAACATT+TGG + Chr4:70775868-70775887 None:intergenic 30.0%
AGTGAAACAGTCATATCAAA+TGG + Chr4:70774001-70774020 None:intergenic 30.0%
ATAAGATGGGCAAATTAGAA+TGG + Chr4:70774088-70774107 None:intergenic 30.0%
CATTGTTACCTGCAAATAAA+TGG - Chr4:70773936-70773955 MsG0480022295.01.T01:intron 30.0%
CATTTATTTGCAGGTAACAA+TGG + Chr4:70773938-70773957 None:intergenic 30.0%
CCAAAACCAAAACCAAATAT+TGG - Chr4:70776183-70776202 MsG0480022295.01.T01:exon 30.0%
GAACCTTAAGACATTTGATA+AGG + Chr4:70775322-70775341 None:intergenic 30.0%
GAAGAAGAAGAAGAACATTT+GGG + Chr4:70775867-70775886 None:intergenic 30.0%
GATCAAATCAATGTCTTTCA+TGG - Chr4:70774907-70774926 MsG0480022295.01.T01:intron 30.0%
GATGATTTAGTATGTCAAGT+AGG - Chr4:70774553-70774572 MsG0480022295.01.T01:intron 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG + Chr4:70775499-70775518 None:intergenic 30.0%
GTTATGTTGTTACTCTTTGT+AGG - Chr4:70776021-70776040 MsG0480022295.01.T01:exon 30.0%
GTTGGTTACTATTACATGTA+GGG - Chr4:70776139-70776158 MsG0480022295.01.T01:exon 30.0%
TTGGTTACTATTACATGTAG+GGG - Chr4:70776140-70776159 MsG0480022295.01.T01:exon 30.0%
TTGTTGATACTCAATCATCA+AGG + Chr4:70775754-70775773 None:intergenic 30.0%
! ACTGGTTTAGTTCAAAAAAC+TGG + Chr4:70776300-70776319 None:intergenic 30.0%
! ATAAGATCCATGCTATTTAG+AGG - Chr4:70774588-70774607 MsG0480022295.01.T01:intron 30.0%
! ATGCTATTTAGAGGTGTATT+TGG - Chr4:70774597-70774616 MsG0480022295.01.T01:intron 30.0%
! GCTCTACAACTTTTACATAA+TGG - Chr4:70774330-70774349 MsG0480022295.01.T01:intron 30.0%
! TGCTATTTAGAGGTGTATTT+GGG - Chr4:70774598-70774617 MsG0480022295.01.T01:intron 30.0%
! TTTTCTCTTGTAAATAGGAC+CGG + Chr4:70774958-70774977 None:intergenic 30.0%
!! ACAATGGAAGTGTTAAGAAT+TGG + Chr4:70773922-70773941 None:intergenic 30.0%
!! ACTAGACTAGTTTCACTATT+AGG - Chr4:70774255-70774274 MsG0480022295.01.T01:intron 30.0%
!! CCAAAACCAATATTTGGTTT+TGG + Chr4:70776192-70776211 None:intergenic 30.0%
!! CTAGACTAGTTTCACTATTA+GGG - Chr4:70774256-70774275 MsG0480022295.01.T01:intron 30.0%
!!! ATTTGGTTTTGGTTTTGGTT+TGG + Chr4:70776181-70776200 None:intergenic 30.0%
!!! ATTTGTTTTCAAGTAGCCTA+AGG + Chr4:70775196-70775215 None:intergenic 30.0%
!!! CCAAAACCAAATATTGGTTT+TGG - Chr4:70776189-70776208 MsG0480022295.01.T01:exon 30.0%
!!! CCAATATTTGGTTTTGGTTT+TGG + Chr4:70776186-70776205 None:intergenic 30.0%
!!! GTTTTTAAGTACAACCAGTT+TGG - Chr4:70776244-70776263 MsG0480022295.01.T01:exon 30.0%
!!! TTTGTTTTCAAGTAGCCTAA+GGG + Chr4:70775195-70775214 None:intergenic 30.0%
AAGTACAACCAGTTTGGATA+TGG - Chr4:70776250-70776269 MsG0480022295.01.T01:exon 35.0%
AATTGTACCGTCACATTCAT+CGG - Chr4:70775825-70775844 MsG0480022295.01.T01:CDS 35.0%
ACCCAAATTAATACTCCATC+CGG - Chr4:70774936-70774955 MsG0480022295.01.T01:intron 35.0%
AGATGTTAACTAGTACCCTT+AGG - Chr4:70775177-70775196 MsG0480022295.01.T01:intron 35.0%
AGTATCATCGTATAGTAGCA+TGG - Chr4:70773570-70773589 MsG0480022295.01.T01:intron 35.0%
ATTAAGTGGTGCAGTAATGT+TGG - Chr4:70773648-70773667 MsG0480022295.01.T01:intron 35.0%
CAAATGAACCATGATTTGAC+TGG + Chr4:70773305-70773324 None:intergenic 35.0%
GAAACCACTTCACTAAAAAC+CGG - Chr4:70776222-70776241 MsG0480022295.01.T01:exon 35.0%
GAACATCAATGAAGGGTAAT+AGG + Chr4:70774137-70774156 None:intergenic 35.0%
GAGAAGTCTAAGAAACAAGA+AGG + Chr4:70773271-70773290 None:intergenic 35.0%
GTACTCAACCATTTATTTGC+AGG + Chr4:70773947-70773966 None:intergenic 35.0%
GTGAGGCGTATAAATACATA+AGG + Chr4:70774887-70774906 None:intergenic 35.0%
GTTGAGTGATTGAGCATTTA+TGG - Chr4:70774032-70774051 MsG0480022295.01.T01:intron 35.0%
GTTGTTACTCTTTGTAGGTT+TGG - Chr4:70776026-70776045 MsG0480022295.01.T01:exon 35.0%
TAGAGAGAAATGCCTTGAAA+CGG + Chr4:70775953-70775972 None:intergenic 35.0%
TATGGGCAAAATTAGTTCAC+AGG - Chr4:70774406-70774425 MsG0480022295.01.T01:intron 35.0%
TGTAATTAATCTTGCACGCA+GGG - Chr4:70773615-70773634 MsG0480022295.01.T01:intron 35.0%
TTAAGTGGTGCAGTAATGTT+GGG - Chr4:70773649-70773668 MsG0480022295.01.T01:intron 35.0%
TTGTAATTAATCTTGCACGC+AGG - Chr4:70773614-70773633 MsG0480022295.01.T01:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - Chr4:70775065-70775084 MsG0480022295.01.T01:intron 35.0%
! ACCGGATGGAGTATTAATTT+GGG + Chr4:70774940-70774959 None:intergenic 35.0%
! GAATGTGACGGTACAATTTT+GGG + Chr4:70775823-70775842 None:intergenic 35.0%
! GGTTGGTTACTATTACATGT+AGG - Chr4:70776138-70776157 MsG0480022295.01.T01:exon 35.0%
! TGAATGTGACGGTACAATTT+TGG + Chr4:70775824-70775843 None:intergenic 35.0%
!! AAGACATTGATTTGATCGTG+AGG + Chr4:70774904-70774923 None:intergenic 35.0%
!!! AAAACCGGTTTTTAGTGAAG+TGG + Chr4:70776229-70776248 None:intergenic 35.0%
!!! AACTGGTTTTTCTGACAAAC+CGG + Chr4:70776283-70776302 None:intergenic 35.0%
!!! GTTTTTAGTGAAGTGGTTTC+AGG + Chr4:70776222-70776241 None:intergenic 35.0%
!!! TTAGAGACCTGTTTTGACTT+TGG + Chr4:70773447-70773466 None:intergenic 35.0%
!!! TTGGGATCTTTTTTCTCCTT+TGG + Chr4:70773736-70773755 None:intergenic 35.0%
AGATAAAAGACTTGATCGGG+AGG + Chr4:70774482-70774501 None:intergenic 40.0%
AGCTGAAACCAGTCAAATCA+TGG - Chr4:70773294-70773313 MsG0480022295.01.T01:exon 40.0%
ATACATGTTGAAATGGCACC+GGG + Chr4:70776097-70776116 None:intergenic 40.0%
ATATAGGGAAGAGCTATTCC+AGG + Chr4:70773374-70773393 None:intergenic 40.0%
ATTGGAAACTATTCAGACGC+AGG + Chr4:70773904-70773923 None:intergenic 40.0%
ATTGTACCGTCACATTCATC+GGG - Chr4:70775826-70775845 MsG0480022295.01.T01:CDS 40.0%
CAACCAGTTTGGATATGGTT+TGG - Chr4:70776255-70776274 MsG0480022295.01.T01:exon 40.0%
CATACATGTTGAAATGGCAC+CGG + Chr4:70776098-70776117 None:intergenic 40.0%
GATGGAAAACAACCTTATCC+CGG - Chr4:70776076-70776095 MsG0480022295.01.T01:exon 40.0%
GATTGAGCATTTATGGTCAG+CGG - Chr4:70774039-70774058 MsG0480022295.01.T01:intron 40.0%
GTTCCAAACCATATCCAAAC+TGG + Chr4:70776261-70776280 None:intergenic 40.0%
GTTTGGTTGTTGGATCAGTT+CGG - Chr4:70776043-70776062 MsG0480022295.01.T01:exon 40.0%
TAAGTGGTGCAGTAATGTTG+GGG - Chr4:70773650-70773669 MsG0480022295.01.T01:intron 40.0%
TATAGGGAAGAGCTATTCCA+GGG + Chr4:70773373-70773392 None:intergenic 40.0%
TTGGCAACCAAAGTCAAAAC+AGG - Chr4:70773437-70773456 MsG0480022295.01.T01:intron 40.0%
! CTCTTTGTAGGTTTGGTTGT+TGG - Chr4:70776033-70776052 MsG0480022295.01.T01:exon 40.0%
! GACCGGATGGAGTATTAATT+TGG + Chr4:70774941-70774960 None:intergenic 40.0%
! GTTTGGATATGGTTTGGAAC+CGG - Chr4:70776261-70776280 MsG0480022295.01.T01:exon 40.0%
!! ATGGTTGATGATGCACTAGT+GGG - Chr4:70773589-70773608 MsG0480022295.01.T01:intron 40.0%
!! GATAAGGTTGTTTTCCATCG+TGG + Chr4:70776075-70776094 None:intergenic 40.0%
!!! GGATCTTTTTTCTCCTTTGG+TGG + Chr4:70773733-70773752 None:intergenic 40.0%
!!! TCTTTTTTCTCCTTTGGTGG+AGG + Chr4:70773730-70773749 None:intergenic 40.0%
ACTCCTAGAGTGAACTGCAT+TGG - Chr4:70773418-70773437 MsG0480022295.01.T01:exon 45.0%
AGACTGTGATCATCACTGGT+AGG + Chr4:70773486-70773505 None:intergenic 45.0%
ATGCAGACTGTGATCATCAC+TGG + Chr4:70773490-70773509 None:intergenic 45.0%
ATTCGACCCGATGAATGTGA+CGG + Chr4:70775835-70775854 None:intergenic 45.0%
CTATGAAAGCAGAAGTTGCC+AGG - Chr4:70773806-70773825 MsG0480022295.01.T01:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - Chr4:70775069-70775088 MsG0480022295.01.T01:intron 45.0%
CTCTTGTAAATAGGACCGGA+TGG + Chr4:70775088-70775069 None:intergenic 45.0%
GTGATGATCACAGTCTGCAT+CGG - Chr4:70773490-70773509 MsG0480022295.01.T01:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - Chr4:70775068-70775087 MsG0480022295.01.T01:intron 45.0%
TGCCTAAATAGTACTCCCTC+CGG + Chr4:70775087-70775106 None:intergenic 45.0%
TTGCCAATGCAGTTCACTCT+AGG + Chr4:70773424-70773443 None:intergenic 45.0%
TTGCCAGGTTAAGAGAGCAA+GGG - Chr4:70773821-70773840 MsG0480022295.01.T01:intron 45.0%
! AATGCAGTTCACTCTAGGAG+TGG + Chr4:70773419-70773438 None:intergenic 45.0%
! CTCAGCTGTTTAGAGTAGAG+AGG + Chr4:70773524-70773543 None:intergenic 45.0%
! TGCTGCTCAGGCAAAAGTAT+TGG - Chr4:70773762-70773781 MsG0480022295.01.T01:intron 45.0%
! TTTTTCTCCTTTGGTGGAGG+AGG + Chr4:70773727-70773746 None:intergenic 45.0%
!! AAGGTTGTTTTCCATCGTGG+AGG + Chr4:70776072-70776091 None:intergenic 45.0%
!! AGGGCATTGATGGGATTAAG+TGG - Chr4:70773634-70773653 MsG0480022295.01.T01:intron 45.0%
!! CATGGTTGATGATGCACTAG+TGG - Chr4:70773588-70773607 MsG0480022295.01.T01:intron 45.0%
!!! TTATTTAAAACTTTTTTTAA+AGG - Chr4:70775680-70775699 MsG0480022295.01.T01:CDS 5.0%
AACTATTCAGACGCAGGAGG+TGG + Chr4:70773898-70773917 None:intergenic 50.0%
ATGATCACAGTCTGCATCGG+AGG - Chr4:70773493-70773512 MsG0480022295.01.T01:intron 50.0%
CAGTAATGTTGGGGCTGAGT+TGG - Chr4:70773659-70773678 MsG0480022295.01.T01:intron 50.0%
CTGTGATCATCACTGGTAGG+AGG + Chr4:70773483-70773502 None:intergenic 50.0%
CTTCAGCTTCAGACCTTCAC+CGG - Chr4:70775903-70775922 MsG0480022295.01.T01:intron 50.0%
CTTCCCTTGCTCTCTTAACC+TGG + Chr4:70773827-70773846 None:intergenic 50.0%
GCTGAGTTTGCATGCCACAT+AGG + Chr4:70774758-70774777 None:intergenic 50.0%
GGAAACTATTCAGACGCAGG+AGG + Chr4:70773901-70773920 None:intergenic 50.0%
GTTGCCAGGTTAAGAGAGCA+AGG - Chr4:70773820-70773839 MsG0480022295.01.T01:intron 50.0%
TCTCACAGAGAGAGCTGTTG+CGG + Chr4:70773350-70773369 None:intergenic 50.0%
TGCCTTGAAACGGCGTGTTT+CGG + Chr4:70775943-70775962 None:intergenic 50.0%
! GTGAAGGTCTGAAGCTGAAG+TGG + Chr4:70775903-70775922 None:intergenic 50.0%
! GTTGAAATGGCACCGGGATA+AGG + Chr4:70776091-70776110 None:intergenic 50.0%
!! GACCGGAGGGAGTACTATTT+AGG - Chr4:70775082-70775101 MsG0480022295.01.T01:intron 50.0%
AGGAGGTGGAGGTCTTCTAG+CGG + Chr4:70773710-70773729 None:intergenic 55.0%
GCCTGAGCAGCACTCAGATT+GGG + Chr4:70773754-70773773 None:intergenic 55.0%
TGCCTGAGCAGCACTCAGAT+TGG + Chr4:70773755-70773774 None:intergenic 55.0%
TTCTCCTTTGGTGGAGGAGG+TGG + Chr4:70773724-70773743 None:intergenic 55.0%
! TCCCAATCTGAGTGCTGCTC+AGG - Chr4:70773750-70773769 MsG0480022295.01.T01:intron 55.0%
!! CTTGCACGCAGGGCATTGAT+GGG - Chr4:70773625-70773644 MsG0480022295.01.T01:intron 55.0%
!! TCTTGCACGCAGGGCATTGA+TGG - Chr4:70773624-70773643 MsG0480022295.01.T01:intron 55.0%
ACCTCCACCTCCTCCACCAA+AGG - Chr4:70773717-70773736 MsG0480022295.01.T01:intron 60.0%
ACTACAGGAGGAGGAGGAGG+TGG + Chr4:70773871-70773890 None:intergenic 60.0%
AGAGAGAGCTGTTGCGGCTG+TGG + Chr4:70773344-70773363 None:intergenic 60.0%
AGAGCTGTTGCGGCTGTGGT+AGG + Chr4:70773340-70773359 None:intergenic 60.0%
CAGCTCTCTCTGTGAGACCC+TGG - Chr4:70773353-70773372 MsG0480022295.01.T01:exon 60.0%
CAGTTCGGAGTCCTCCACGA+TGG - Chr4:70776058-70776077 MsG0480022295.01.T01:exon 60.0%
CGCCGAAACACGCCGTTTCA+AGG - Chr4:70775938-70775957 MsG0480022295.01.T01:intron 60.0%
GAGTTGTCGGAGACCGGTGA+AGG + Chr4:70775919-70775938 None:intergenic 60.0%
GCAACTACAGGAGGAGGAGG+AGG + Chr4:70773874-70773893 None:intergenic 60.0%
GCAGGAGGTGGTGCAACTAC+AGG + Chr4:70773886-70773905 None:intergenic 60.0%
GGAGGTGGTGCAACTACAGG+AGG + Chr4:70773883-70773902 None:intergenic 60.0%
GGCGTGTTTCGGCGAGTTGT+CGG + Chr4:70775932-70775951 None:intergenic 60.0%
GGTGCAACTACAGGAGGAGG+AGG + Chr4:70773877-70773896 None:intergenic 60.0%
GGTGGTGCAACTACAGGAGG+AGG + Chr4:70773880-70773899 None:intergenic 60.0%
GTTGCGGCTGTGGTAGGAGT+CGG + Chr4:70773334-70773353 None:intergenic 60.0%
TCCTTTGGTGGAGGAGGTGG+AGG + Chr4:70773721-70773740 None:intergenic 60.0%
TTCGGCGAGTTGTCGGAGAC+CGG + Chr4:70775925-70775944 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 70773165 70776328 70773165 ID=MsG0480022295.01;
Chr4 mRNA 70773165 70776328 70773165 ID=MsG0480022295.01.T01;Parent=MsG0480022295.01
Chr4 exon 70773165 70773450 70773165 ID=MsG0480022295.01.T01.exon;Parent=MsG0480022295.01.T01
Chr4 exon 70775440 70775885 70775440 ID=MsG0480022295.01.T01.exon;Parent=MsG0480022295.01.T01
Chr4 CDS 70775578 70775885 70775578 ID=MsG0480022295.01.T01.cds;Parent=MsG0480022295.01.T01
Chr4 CDS 70775979 70776180 70775979 ID=MsG0480022295.01.T01.cds;Parent=MsG0480022295.01.T01
Chr4 exon 70775979 70776328 70775979 ID=MsG0480022295.01.T01.exon;Parent=MsG0480022295.01.T01
Gene Sequence

>MsG0480022295.01.T01

ATGGTTCATTTGCTCACACCGACTCCTACCACAGCCGCAACAGCTCTCTCTGTGAGACCCTGGAATAGCTCTTCCCTATATTCTTCGAAAAATGTGTGCTTTACCACTCCTAGAGTGAACTGCATTGGCAACCAAAGTCAAAACAGGTCTCTAATCTTGATCAAGTTCCTCCTACCAGTGATGATCACAGTCTGCATCGGAGTGGGTGTTGTAATTAATCTTGCACGCAGGGCATTGATGGGATTAAGTGGTGCAGTAATGTTGGGGCTGAGTTGGAGTGATGAGCAAAGTGCAAGAGCAGCCGCTAGAAGACCTCCACCTCCTCCACCAAAGGAGAAAAAAGATCCCAATCTGAGTGCTGCTCAGGCAAAAGTATTGGCTAGCAAGAAGAGAAAAGAAGCTATGAAAGCAGAAGTTGCCAGGTTAAGAGAGCAAGGGAAGACTGTTAACATTAATAAAGAGCCACCTCCTCCTCCTCCTGTAGTTGCACCACCTCCTGCGTCTGAATAG

Protein sequence

>MsG0480022295.01.T01

MVHLLTPTPTTAATALSVRPWNSSSLYSSKNVCFTTPRVNCIGNQSQNRSLILIKFLLPVMITVCIGVGVVINLARRALMGLSGAVMLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKTVNINKEPPPPPPVVAPPPASE*