AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046759.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046759.01.T01 MTR_4g114320 95.990 399 15 1 1 399 1 398 0.0 786
MsG0880046759.01.T01 MTR_3g107510 65.707 382 111 6 26 401 32 399 2.43e-174 492
MsG0880046759.01.T01 MTR_1g012030 76.596 282 64 2 116 396 131 411 3.26e-155 444
MsG0880046759.01.T01 MTR_4g005330 38.567 293 162 3 121 396 63 354 5.25e-68 219
MsG0880046759.01.T01 MTR_4g005330 38.754 289 159 3 125 396 1 288 1.44e-67 216
MsG0880046759.01.T01 MTR_8g096050 37.993 279 167 4 122 395 225 502 9.02e-53 183
MsG0880046759.01.T01 MTR_3g098460 36.201 279 172 4 122 395 203 480 9.25e-50 175
MsG0880046759.01.T01 MTR_7g068340 34.545 275 162 7 135 401 98 362 2.24e-48 169
MsG0880046759.01.T01 MTR_7g068340 28.161 174 120 2 123 296 186 354 2.21e-16 80.5
MsG0880046759.01.T01 MTR_5g009500 32.343 303 176 6 122 395 36 338 5.25e-47 164
MsG0880046759.01.T01 MTR_5g009500 28.431 204 136 4 206 399 25 228 9.41e-17 81.3
MsG0880046759.01.T01 MTR_5g009500 26.263 198 123 6 121 295 138 335 8.41e-14 72.4
MsG0880046759.01.T01 MTR_7g084400 35.816 282 170 5 120 395 209 485 5.63e-47 167
MsG0880046759.01.T01 MTR_8g027975 32.131 305 176 7 122 395 49 353 5.96e-46 162
MsG0880046759.01.T01 MTR_8g027975 29.592 196 126 4 215 399 47 241 1.02e-17 84.3
MsG0880046759.01.T01 MTR_7g064980 31.935 310 189 7 111 401 14 320 5.61e-44 155
MsG0880046759.01.T01 MTR_7g064980 24.490 196 136 4 109 295 119 311 1.98e-14 73.9
MsG0880046759.01.T01 MTR_8g090210 34.694 294 168 5 122 395 108 397 8.31e-43 154
MsG0880046759.01.T01 MTR_8g090210 30.939 181 103 4 140 299 219 398 1.51e-15 78.2
MsG0880046759.01.T01 MTR_3g074490 35.235 298 169 5 118 395 110 403 6.22e-42 152
MsG0880046759.01.T01 MTR_3g074490 27.778 180 127 2 221 400 118 294 8.80e-14 72.8
MsG0880046759.01.T01 MTR_3g074490 28.163 245 148 6 78 299 165 404 5.61e-11 64.3
MsG0880046759.01.T01 MTR_3g104600 30.887 327 187 9 100 395 11 329 4.66e-40 145
MsG0880046759.01.T01 MTR_3g104600 27.861 201 126 2 220 401 36 236 1.31e-17 83.6
MsG0880046759.01.T01 MTR_2g436930 32.039 309 170 8 126 395 17 324 1.11e-39 144
MsG0880046759.01.T01 MTR_2g436930 29.592 196 118 4 218 394 14 208 3.83e-18 85.1
MsG0880046759.01.T01 MTR_2g436930 26.562 192 115 4 125 292 129 318 2.02e-14 74.3
MsG0880046759.01.T01 MTR_4g016730 33.099 284 151 8 135 401 100 361 3.34e-39 144
MsG0880046759.01.T01 MTR_4g016730 29.592 196 116 6 123 312 195 374 9.08e-11 63.5
MsG0880046759.01.T01 MTR_4g119770 29.260 311 178 6 126 395 16 325 6.03e-38 140
MsG0880046759.01.T01 MTR_4g119770 27.778 198 121 3 218 394 13 209 5.09e-18 84.7
MsG0880046759.01.T01 MTR_4g119770 28.205 195 112 5 125 294 130 321 1.49e-15 77.4
MsG0880046759.01.T01 MTR_6g091800 28.289 304 174 7 122 395 17 306 3.51e-36 134
MsG0880046759.01.T01 MTR_6g091800 29.412 204 129 4 213 401 12 215 2.00e-19 88.6
MsG0880046759.01.T01 MTR_5g081150 31.525 295 184 5 120 397 30 323 2.03e-35 133
MsG0880046759.01.T01 MTR_5g081150 29.032 217 133 7 199 401 19 228 7.45e-12 66.2
MsG0880046759.01.T01 MTR_6g091800 26.220 328 174 7 122 395 17 330 1.58e-32 125
MsG0880046759.01.T01 MTR_6g091800 26.316 228 129 4 213 401 12 239 5.18e-16 79.0
MsG0880046759.01.T01 MTR_7g109135 31.250 288 181 8 126 398 24 309 6.53e-32 123
MsG0880046759.01.T01 MTR_7g109135 28.571 189 125 4 221 400 24 211 2.15e-11 65.1
MsG0880046759.01.T01 MTR_2g436930 35.678 199 106 4 218 395 37 234 3.93e-30 116
MsG0880046759.01.T01 MTR_2g436930 26.562 192 115 4 125 292 39 228 5.69e-15 74.3
MsG0880046759.01.T01 MTR_6g034145 27.559 254 156 5 163 395 6 252 1.26e-29 115
MsG0880046759.01.T01 MTR_6g034145 30.323 155 96 2 259 401 7 161 1.63e-16 79.3
MsG0880046759.01.T01 MTR_6g034145 24.878 205 128 5 124 307 61 260 9.53e-12 65.5
MsG0880046759.01.T01 MTR_7g084400 35.648 216 131 5 120 328 203 417 4.10e-29 117
MsG0880046759.01.T01 MTR_7g084400 29.213 178 122 2 220 394 208 384 1.76e-13 72.0
MsG0880046759.01.T01 MTR_8g076760 30.142 282 165 10 140 395 30 305 5.32e-29 115
MsG0880046759.01.T01 MTR_8g076760 28.409 176 116 4 234 401 29 202 8.22e-14 72.0
MsG0880046759.01.T01 MTR_8g076760 26.866 201 121 9 123 301 112 308 2.02e-12 67.8
MsG0880046759.01.T01 MTR_6g092210 27.016 248 159 5 163 395 6 246 1.32e-28 112
MsG0880046759.01.T01 MTR_6g092210 30.872 149 97 2 259 401 7 155 6.76e-17 80.1
MsG0880046759.01.T01 MTR_6g091800 29.057 265 141 8 122 353 17 267 3.46e-28 112
MsG0880046759.01.T01 MTR_6g091800 29.412 204 129 4 213 401 12 215 1.19e-19 88.6
MsG0880046759.01.T01 MTR_7g109135 30.175 285 181 8 126 398 24 302 5.30e-28 112
MsG0880046759.01.T01 MTR_6g091800 28.689 244 133 6 122 338 17 246 1.19e-27 110
MsG0880046759.01.T01 MTR_6g091800 29.412 204 129 4 213 401 12 215 1.02e-19 88.6
MsG0880046759.01.T01 MTR_6g091800 25.161 310 164 7 122 377 17 312 5.15e-27 110
MsG0880046759.01.T01 MTR_6g091800 26.316 228 129 4 213 401 12 239 4.90e-16 79.0
MsG0880046759.01.T01 MTR_1g087840 30.153 262 163 7 143 396 55 304 1.56e-25 105
MsG0880046759.01.T01 MTR_1g097890 28.000 275 180 5 125 399 52 308 1.85e-25 105
MsG0880046759.01.T01 MTR_8g098240 28.938 273 186 5 125 395 321 587 3.01e-25 108
MsG0880046759.01.T01 MTR_8g098240 25.683 183 128 3 120 298 409 587 6.90e-14 73.6
MsG0880046759.01.T01 MTR_8g098240 25.592 211 136 5 200 395 287 491 2.36e-11 65.9
MsG0880046759.01.T01 MTR_6g091800 26.644 289 141 8 122 353 17 291 1.38e-24 102
MsG0880046759.01.T01 MTR_6g091800 26.316 228 129 4 213 401 12 239 3.90e-16 78.6
MsG0880046759.01.T01 MTR_4g119770 27.869 244 144 5 126 338 16 258 1.75e-24 101
MsG0880046759.01.T01 MTR_4g119770 27.919 197 120 3 218 393 13 208 1.77e-18 85.1
MsG0880046759.01.T01 MTR_5g073040 27.178 287 195 7 124 401 39 320 3.20e-24 102
MsG0880046759.01.T01 MTR_6g091800 26.119 268 133 6 122 338 17 270 3.74e-24 101
MsG0880046759.01.T01 MTR_6g091800 26.316 228 129 4 213 401 12 239 3.35e-16 79.0
MsG0880046759.01.T01 MTR_7g109135 30.901 233 151 6 174 398 1 231 4.25e-24 100
MsG0880046759.01.T01 MTR_5g055410 32.857 280 161 8 136 395 33 305 4.74e-24 102
MsG0880046759.01.T01 MTR_5g055410 31.792 173 107 4 235 399 37 206 3.71e-13 70.5
MsG0880046759.01.T01 MTR_7g109135 32.524 206 130 5 201 398 6 210 2.55e-22 94.7
MsG0880046759.01.T01 MTR_5g030530 24.915 293 199 4 122 395 6 296 2.57e-21 93.6
MsG0880046759.01.T01 MTR_3g104500 27.273 297 194 10 118 395 28 321 2.67e-21 94.4
MsG0880046759.01.T01 MTR_3g104500 29.500 200 118 5 220 400 35 230 3.40e-15 76.3
MsG0880046759.01.T01 MTR_8g092080 27.273 275 180 6 124 397 52 307 4.43e-21 93.6
MsG0880046759.01.T01 MTR_6g034515 27.509 269 179 7 140 399 83 344 9.52e-21 93.2
MsG0880046759.01.T01 MTR_6g034515 29.949 197 121 4 125 307 161 354 2.00e-15 77.4
MsG0880046759.01.T01 MTR_6g034515 27.907 172 114 5 232 401 80 243 1.43e-12 68.9
MsG0880046759.01.T01 MTR_8g066975 25.424 295 195 6 122 395 6 296 1.58e-20 91.7
MsG0880046759.01.T01 MTR_8g019480 24.848 330 205 8 112 400 22 349 1.66e-20 92.4
MsG0880046759.01.T01 MTR_4g078545 25.899 278 186 6 124 383 75 350 3.94e-19 88.6
MsG0880046759.01.T01 MTR_4g078545 25.481 208 131 6 205 392 61 264 1.23e-11 66.2
MsG0880046759.01.T01 MTR_6g015860 25.503 298 188 10 130 400 21 311 4.25e-19 87.8
MsG0880046759.01.T01 MTR_2g098070 25.670 261 164 7 150 396 109 353 5.43e-19 88.2
MsG0880046759.01.T01 MTR_2g098070 25.701 214 135 5 203 396 50 259 9.30e-12 66.2
MsG0880046759.01.T01 MTR_6g091910 29.500 200 121 5 213 395 12 208 7.32e-19 85.1
MsG0880046759.01.T01 MTR_6g091910 26.829 205 126 5 122 307 17 216 4.87e-15 73.9
MsG0880046759.01.T01 MTR_7g015870 24.643 280 189 6 140 399 41 318 1.85e-18 85.9
MsG0880046759.01.T01 MTR_4g012850 23.711 291 213 4 116 399 8 296 3.81e-18 84.7
MsG0880046759.01.T01 MTR_3g028590 26.761 284 176 8 124 383 93 368 5.25e-18 85.5
MsG0880046759.01.T01 MTR_3g028590 26.761 284 176 8 124 383 97 372 5.93e-18 85.5
MsG0880046759.01.T01 MTR_8g036880 24.752 303 165 6 121 383 99 378 6.60e-18 85.1
MsG0880046759.01.T01 MTR_2g032610 27.835 291 183 10 122 389 27 313 2.15e-17 82.8
MsG0880046759.01.T01 MTR_2g032610 26.840 231 133 9 97 294 88 315 3.64e-11 64.3
MsG0880046759.01.T01 MTR_3g025800 24.837 306 188 7 121 389 25 325 2.17e-17 83.2
MsG0880046759.01.T01 MTR_1g095780 25.267 281 196 8 121 400 522 789 2.77e-17 84.3
MsG0880046759.01.T01 MTR_1g095780 27.041 196 134 4 119 310 605 795 9.79e-12 67.4
MsG0880046759.01.T01 MTR_8g107270 22.143 280 198 5 122 383 16 293 3.39e-17 82.0
MsG0880046759.01.T01 MTR_8g107270 27.041 196 120 6 220 396 20 211 8.60e-11 63.2
MsG0880046759.01.T01 MTR_1g088995 29.670 182 117 4 223 397 34 211 7.61e-17 79.7
MsG0880046759.01.T01 MTR_5g081150 28.017 232 147 5 120 337 30 255 1.43e-16 79.3
MsG0880046759.01.T01 MTR_5g081150 29.032 217 133 7 199 401 19 228 3.07e-12 66.6
MsG0880046759.01.T01 MTR_5g081150 28.182 220 143 4 120 325 30 248 1.72e-16 79.0
MsG0880046759.01.T01 MTR_5g081150 29.032 217 133 7 199 401 19 228 2.24e-12 67.0
MsG0880046759.01.T01 MTR_1g088995 29.670 182 117 4 223 397 34 211 3.13e-16 79.3
MsG0880046759.01.T01 MTR_1g088995 24.638 276 197 5 126 394 35 306 2.82e-12 67.4
MsG0880046759.01.T01 MTR_2g102010 30.263 152 96 3 137 278 123 274 9.10e-16 77.8
MsG0880046759.01.T01 MTR_2g102010 22.807 285 210 4 122 398 15 297 2.18e-13 70.9
MsG0880046759.01.T01 MTR_7g015870 24.306 288 192 8 130 394 25 309 1.17e-15 77.8
MsG0880046759.01.T01 MTR_7g015870 25.532 188 122 5 125 296 123 308 1.48e-12 68.6
MsG0880046759.01.T01 MTR_6g091800 27.374 179 92 5 122 273 17 184 2.05e-14 71.6
MsG0880046759.01.T01 MTR_6g091800 28.249 177 112 4 213 374 12 188 8.07e-13 67.0
MsG0880046759.01.T01 MTR_4g088545 24.038 312 192 9 115 395 3 300 1.18e-13 71.6
MsG0880046759.01.T01 MTR_7g117030 25.444 338 183 12 121 400 14 340 4.55e-13 70.1
MsG0880046759.01.T01 MTR_3g090820 24.627 268 170 7 155 395 125 387 6.55e-13 70.1
MsG0880046759.01.T01 MTR_3g100570 24.590 244 166 7 165 395 72 310 9.30e-13 68.9
MsG0880046759.01.T01 MTR_4g057850 28.169 213 133 8 200 400 3 207 1.76e-12 68.2
MsG0880046759.01.T01 MTR_4g057850 22.615 283 197 7 119 385 17 293 2.36e-12 67.8
MsG0880046759.01.T01 MTR_6g091800 29.197 137 74 4 122 246 17 142 1.81e-12 66.6
MsG0880046759.01.T01 MTR_6g033280 23.297 279 177 9 48 316 7 258 2.21e-12 68.2
MsG0880046759.01.T01 MTR_6g033280 25.946 185 131 3 217 398 61 242 1.82e-11 65.5
MsG0880046759.01.T01 MTR_1g090330 22.959 196 132 5 117 296 103 295 5.52e-12 66.6
MsG0880046759.01.T01 MTR_1g090330 20.962 291 204 9 123 394 13 296 1.48e-11 65.1
MsG0880046759.01.T01 MTR_1g090330 23.204 181 119 4 233 399 28 202 2.14e-11 64.7
MsG0880046759.01.T01 MTR_8g086070 19.723 289 210 7 119 394 16 295 3.36e-11 64.3
MsG0880046759.01.T01 MTR_8g068890 24.082 245 169 6 165 397 75 314 5.18e-11 63.9
MsG0880046759.01.T01 MTR_8g086070 25.568 176 124 2 205 376 7 179 8.31e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046759.01.T01 AT4G32400 71.134 291 82 2 112 401 102 391 1.14e-152 437
MsG0880046759.01.T01 AT3G20240 41.077 297 157 4 122 401 50 345 1.03e-69 223
MsG0880046759.01.T01 AT5G61810 36.691 278 160 6 124 395 65 332 1.41e-46 163
MsG0880046759.01.T01 AT5G61810 29.379 177 121 3 123 296 155 330 2.25e-18 85.9
MsG0880046759.01.T01 AT5G51050 37.770 278 162 6 124 395 223 495 1.50e-46 167
MsG0880046759.01.T01 AT5G51050 29.444 180 120 5 123 297 317 494 7.68e-18 85.5
MsG0880046759.01.T01 AT3G51870 32.364 275 168 6 135 401 102 366 3.49e-46 163
MsG0880046759.01.T01 AT3G51870 27.841 176 118 4 123 296 190 358 2.94e-13 71.2
MsG0880046759.01.T01 AT4G01100 33.115 305 173 8 122 395 40 344 1.43e-45 160
MsG0880046759.01.T01 AT4G01100 30.928 194 122 4 215 397 38 230 1.80e-17 83.6
MsG0880046759.01.T01 AT4G01100 24.378 201 127 3 121 296 142 342 7.85e-14 72.8
MsG0880046759.01.T01 AT2G37890 35.254 295 169 9 120 395 41 332 1.47e-45 160
MsG0880046759.01.T01 AT5G61810 36.429 280 158 6 124 395 208 475 2.50e-45 163
MsG0880046759.01.T01 AT5G61810 29.379 177 121 3 123 296 298 473 6.00e-18 85.9
MsG0880046759.01.T01 AT3G53940 33.898 295 173 6 120 395 69 360 7.12e-45 159
MsG0880046759.01.T01 AT4G01100 31.975 319 172 8 122 395 40 358 1.42e-44 158
MsG0880046759.01.T01 AT4G01100 29.469 207 122 4 215 397 38 244 5.63e-17 82.0
MsG0880046759.01.T01 AT4G01100 24.378 201 127 3 121 296 156 356 6.45e-14 73.2
MsG0880046759.01.T01 AT5G01500 33.818 275 164 6 135 401 130 394 2.53e-44 159
MsG0880046759.01.T01 AT5G01500 30.114 176 118 3 121 296 216 386 7.09e-14 73.2
MsG0880046759.01.T01 AT5G07320 36.803 269 150 7 133 393 218 474 1.63e-43 158
MsG0880046759.01.T01 AT5G07320 29.518 166 114 2 229 394 219 381 6.71e-14 73.6
MsG0880046759.01.T01 AT5G64970 36.027 297 160 7 122 395 133 422 7.95e-43 155
MsG0880046759.01.T01 AT5G64970 29.834 181 105 5 140 299 244 423 3.62e-13 71.2
MsG0880046759.01.T01 AT4G01100 32.653 294 167 8 133 395 1 294 3.31e-42 150
MsG0880046759.01.T01 AT4G01100 29.885 174 110 4 235 397 8 180 1.92e-15 77.0
MsG0880046759.01.T01 AT4G01100 24.155 207 132 3 121 302 92 298 5.00e-14 72.8
MsG0880046759.01.T01 AT5G64970 35.294 289 163 6 127 395 14 298 1.37e-41 149
MsG0880046759.01.T01 AT5G64970 29.834 181 105 5 140 299 120 299 1.17e-13 71.6
MsG0880046759.01.T01 AT5G64970 29.143 175 120 3 226 400 19 189 2.19e-11 64.7
MsG0880046759.01.T01 AT3G55640 32.534 292 175 6 120 392 34 322 1.52e-38 141
MsG0880046759.01.T01 AT3G55640 27.778 198 131 6 111 299 132 326 1.20e-15 77.8
MsG0880046759.01.T01 AT3G55640 32.534 292 175 6 120 392 34 322 1.52e-38 141
MsG0880046759.01.T01 AT3G55640 27.778 198 131 6 111 299 132 326 1.20e-15 77.8
MsG0880046759.01.T01 AT4G26180 29.801 302 167 8 122 392 19 306 3.93e-38 140
MsG0880046759.01.T01 AT4G26180 31.034 203 125 4 206 393 7 209 1.94e-18 86.3
MsG0880046759.01.T01 AT5G64970 35.484 279 150 7 122 377 133 404 3.45e-37 139
MsG0880046759.01.T01 AT5G64970 30.233 172 117 2 221 392 137 305 4.55e-13 70.9
MsG0880046759.01.T01 AT1G14560 30.584 291 164 8 135 395 38 320 5.10e-37 137
MsG0880046759.01.T01 AT1G14560 29.670 182 112 2 235 400 43 224 8.78e-19 87.0
MsG0880046759.01.T01 AT1G78180 31.879 298 178 6 122 399 126 418 1.43e-36 138
MsG0880046759.01.T01 AT1G78180 27.723 202 122 5 120 299 217 416 4.45e-11 64.7
MsG0880046759.01.T01 AT3G21390 30.573 314 176 6 126 398 21 333 1.69e-36 136
MsG0880046759.01.T01 AT3G21390 29.032 217 125 6 206 400 8 217 2.19e-20 91.7
MsG0880046759.01.T01 AT3G21390 29.592 196 108 6 125 292 131 324 4.99e-13 70.1
MsG0880046759.01.T01 AT3G21390 30.503 318 171 7 126 398 43 355 3.17e-36 136
MsG0880046759.01.T01 AT3G21390 29.187 209 120 5 206 393 30 231 2.67e-20 91.7
MsG0880046759.01.T01 AT3G21390 29.592 196 108 6 125 292 153 346 6.07e-13 70.1
MsG0880046759.01.T01 AT5G48970 29.167 312 178 7 126 395 24 334 7.99e-35 132
MsG0880046759.01.T01 AT5G48970 29.717 212 125 6 206 397 11 218 1.33e-18 86.7
MsG0880046759.01.T01 AT5G48970 26.531 196 115 5 124 292 135 328 5.85e-14 72.8
MsG0880046759.01.T01 AT4G26180 29.268 287 158 8 122 377 19 291 9.33e-34 127
MsG0880046759.01.T01 AT4G26180 31.034 203 125 4 206 393 7 209 1.04e-18 86.3
MsG0880046759.01.T01 AT1G14560 30.037 273 153 8 135 377 38 302 2.45e-31 121
MsG0880046759.01.T01 AT1G14560 29.670 182 112 2 235 400 43 224 9.69e-19 86.7
MsG0880046759.01.T01 AT5G66380 32.095 296 174 10 126 398 12 303 1.03e-30 120
MsG0880046759.01.T01 AT5G66380 30.208 192 125 4 218 401 9 199 1.70e-19 89.0
MsG0880046759.01.T01 AT5G48970 29.699 266 156 7 156 395 3 263 5.75e-30 117
MsG0880046759.01.T01 AT5G48970 26.531 196 115 5 124 292 64 257 1.77e-14 73.6
MsG0880046759.01.T01 AT5G48970 29.054 148 99 3 254 397 2 147 7.73e-14 71.6
MsG0880046759.01.T01 AT2G30160 27.972 286 190 6 124 397 42 323 3.80e-28 113
MsG0880046759.01.T01 AT2G30160 25.121 207 134 7 205 397 18 217 6.89e-11 63.5
MsG0880046759.01.T01 AT1G14560 33.333 201 105 5 220 395 26 222 2.50e-27 108
MsG0880046759.01.T01 AT1G14560 23.188 207 128 4 116 295 17 219 1.35e-11 64.3
MsG0880046759.01.T01 AT1G07030 28.975 283 188 6 124 397 40 318 3.89e-27 110
MsG0880046759.01.T01 AT1G34065 28.014 282 177 6 124 401 75 334 1.19e-26 109
MsG0880046759.01.T01 AT1G34065 27.607 163 112 3 120 280 152 310 8.71e-14 72.4
MsG0880046759.01.T01 AT1G34065 29.545 176 98 4 218 389 74 227 1.08e-12 68.9
MsG0880046759.01.T01 AT1G34065 28.014 282 177 6 124 401 82 341 1.61e-26 109
MsG0880046759.01.T01 AT1G34065 27.607 163 112 3 120 280 159 317 1.05e-13 72.4
MsG0880046759.01.T01 AT1G34065 29.545 176 98 4 218 389 81 234 1.16e-12 68.9
MsG0880046759.01.T01 AT4G11440 29.102 323 209 8 87 395 287 603 2.08e-25 108
MsG0880046759.01.T01 AT4G11440 31.461 178 117 2 219 396 330 502 2.86e-16 81.3
MsG0880046759.01.T01 AT4G11440 29.102 323 209 8 87 395 287 603 2.08e-25 108
MsG0880046759.01.T01 AT4G11440 31.461 178 117 2 219 396 330 502 2.86e-16 81.3
MsG0880046759.01.T01 AT3G53940 31.532 222 133 5 120 325 69 287 5.45e-25 103
MsG0880046759.01.T01 AT3G53940 29.412 221 129 7 196 398 53 264 1.35e-17 82.8
MsG0880046759.01.T01 AT4G39460 28.674 279 173 6 124 398 58 314 5.60e-25 104
MsG0880046759.01.T01 AT4G39460 28.221 163 111 3 120 280 135 293 1.13e-12 68.9
MsG0880046759.01.T01 AT4G39460 28.674 279 173 6 124 398 58 314 5.60e-25 104
MsG0880046759.01.T01 AT4G39460 28.221 163 111 3 120 280 135 293 1.13e-12 68.9
MsG0880046759.01.T01 AT4G39460 28.674 279 173 6 124 398 58 314 5.60e-25 104
MsG0880046759.01.T01 AT4G39460 28.221 163 111 3 120 280 135 293 1.13e-12 68.9
MsG0880046759.01.T01 AT1G25380 32.028 281 163 10 136 395 33 306 8.82e-25 104
MsG0880046759.01.T01 AT1G25380 32.000 175 102 6 235 397 37 206 8.86e-12 66.6
MsG0880046759.01.T01 AT1G25380 32.028 281 163 10 136 395 33 306 8.82e-25 104
MsG0880046759.01.T01 AT1G25380 32.000 175 102 6 235 397 37 206 8.86e-12 66.6
MsG0880046759.01.T01 AT5G46800 27.000 300 191 7 120 395 4 299 5.31e-24 101
MsG0880046759.01.T01 AT5G46800 27.000 300 191 7 120 395 4 299 5.31e-24 101
MsG0880046759.01.T01 AT5G46800 27.000 300 191 7 120 395 4 299 5.31e-24 101
MsG0880046759.01.T01 AT2G47490 30.282 284 168 9 136 398 29 303 1.35e-23 100
MsG0880046759.01.T01 AT5G56450 27.852 298 187 11 122 395 32 325 1.94e-21 94.7
MsG0880046759.01.T01 AT5G56450 27.778 198 124 3 220 398 35 232 7.41e-15 75.5
MsG0880046759.01.T01 AT5G26200 25.155 322 203 11 111 400 27 342 8.05e-21 93.2
MsG0880046759.01.T01 AT2G35800 26.690 281 193 8 121 400 542 810 8.01e-20 92.4
MsG0880046759.01.T01 AT3G55640 29.279 222 138 5 120 325 34 252 9.31e-20 88.6
MsG0880046759.01.T01 AT3G55640 30.481 187 114 5 220 392 39 223 2.20e-17 81.6
MsG0880046759.01.T01 AT3G55640 29.279 222 138 5 120 325 34 252 9.31e-20 88.6
MsG0880046759.01.T01 AT3G55640 30.481 187 114 5 220 392 39 223 2.20e-17 81.6
MsG0880046759.01.T01 AT2G33820 24.667 300 191 10 122 395 16 306 1.69e-19 89.0
MsG0880046759.01.T01 AT1G79900 28.718 195 134 3 119 312 104 294 1.92e-19 88.6
MsG0880046759.01.T01 AT1G79900 25.000 260 183 7 140 395 32 283 3.59e-14 73.2
MsG0880046759.01.T01 AT2G26360 26.351 296 204 10 103 396 94 377 8.25e-19 87.8
MsG0880046759.01.T01 AT2G26360 28.571 182 123 4 125 304 206 382 4.74e-12 67.4
MsG0880046759.01.T01 AT5G15640 26.978 278 177 7 140 394 44 318 2.33e-18 85.9
MsG0880046759.01.T01 AT5G15640 27.500 280 173 8 140 394 37 311 2.90e-18 85.5
MsG0880046759.01.T01 AT5G13490 24.870 386 234 12 26 383 7 364 4.19e-18 85.9
MsG0880046759.01.T01 AT5G13490 24.299 214 137 5 207 399 76 285 3.19e-12 68.2
MsG0880046759.01.T01 AT5G13490 24.870 386 234 12 26 383 7 364 4.19e-18 85.9
MsG0880046759.01.T01 AT5G13490 24.299 214 137 5 207 399 76 285 3.19e-12 68.2
MsG0880046759.01.T01 AT5G42130 27.138 269 181 7 140 399 134 396 4.59e-18 85.9
MsG0880046759.01.T01 AT5G42130 29.480 173 105 6 235 401 134 295 3.06e-12 68.2
MsG0880046759.01.T01 AT4G28390 25.763 295 183 8 115 383 74 358 6.21e-18 85.1
MsG0880046759.01.T01 AT4G28390 27.143 210 129 6 203 392 67 272 1.74e-12 68.9
MsG0880046759.01.T01 AT4G28390 25.763 295 183 8 115 383 74 358 6.21e-18 85.1
MsG0880046759.01.T01 AT4G28390 27.143 210 129 6 203 392 67 272 1.74e-12 68.9
MsG0880046759.01.T01 AT5G17400 25.600 250 165 5 144 383 51 289 8.30e-18 84.0
MsG0880046759.01.T01 AT1G72820 25.912 274 166 6 164 400 70 343 1.33e-17 84.0
MsG0880046759.01.T01 AT1G72820 28.230 209 115 6 127 300 132 340 2.91e-11 64.7
MsG0880046759.01.T01 AT1G72820 25.912 274 166 6 164 400 70 343 1.33e-17 84.0
MsG0880046759.01.T01 AT1G72820 28.230 209 115 6 127 300 132 340 2.91e-11 64.7
MsG0880046759.01.T01 AT4G03115 29.282 181 114 5 224 397 40 213 5.73e-17 80.1
MsG0880046759.01.T01 AT3G08580 24.573 293 172 7 124 383 84 360 5.91e-17 82.4
MsG0880046759.01.T01 AT3G08580 24.299 214 137 5 207 399 72 281 1.26e-11 66.2
MsG0880046759.01.T01 AT3G08580 24.573 293 172 7 124 383 84 360 5.91e-17 82.4
MsG0880046759.01.T01 AT3G08580 24.299 214 137 5 207 399 72 281 1.26e-11 66.2
MsG0880046759.01.T01 AT2G33820 24.026 308 191 11 122 395 16 314 7.18e-17 81.3
MsG0880046759.01.T01 AT4G03115 29.282 181 114 5 224 397 40 213 8.68e-17 79.3
MsG0880046759.01.T01 AT1G74240 25.828 302 187 7 121 389 33 330 1.60e-16 80.9
MsG0880046759.01.T01 AT4G03115 29.282 181 114 5 224 397 40 213 7.97e-16 78.2
MsG0880046759.01.T01 AT4G03115 25.725 276 192 6 125 394 40 308 5.24e-13 69.7
MsG0880046759.01.T01 AT4G03115 30.573 157 100 3 121 272 131 283 1.07e-12 68.9
MsG0880046759.01.T01 AT4G27940 28.464 267 160 10 155 395 146 407 9.80e-16 79.0
MsG0880046759.01.T01 AT4G03115 29.282 181 114 5 224 397 72 245 1.65e-15 77.8
MsG0880046759.01.T01 AT4G03115 25.725 276 192 6 125 394 72 340 4.86e-13 70.1
MsG0880046759.01.T01 AT4G03115 30.573 157 100 3 121 272 163 315 9.48e-13 69.3
MsG0880046759.01.T01 AT5G58970 24.026 308 205 9 111 398 3 301 7.31e-15 75.1
MsG0880046759.01.T01 AT1G14140 26.961 204 133 5 106 295 96 297 8.10e-15 75.1
MsG0880046759.01.T01 AT1G14140 21.088 294 209 8 119 394 11 299 1.68e-13 71.2
MsG0880046759.01.T01 AT1G14140 25.269 186 116 6 232 399 29 209 4.83e-11 63.9
MsG0880046759.01.T01 AT2G33820 26.341 205 132 7 205 395 26 225 8.49e-14 70.9
MsG0880046759.01.T01 AT5G01340 24.653 288 186 10 119 385 12 289 1.63e-13 71.2
MsG0880046759.01.T01 AT5G01340 27.619 210 132 8 203 400 1 202 1.33e-12 68.6
MsG0880046759.01.T01 AT4G03115 30.573 157 100 3 121 272 60 212 2.66e-13 69.7
MsG0880046759.01.T01 AT4G03115 25.847 236 167 4 161 394 8 237 1.66e-11 64.3
MsG0880046759.01.T01 AT4G03115 28.873 142 94 3 257 398 9 143 2.65e-11 63.9
MsG0880046759.01.T01 AT4G03115 30.573 157 100 3 121 272 68 220 3.33e-13 69.7
MsG0880046759.01.T01 AT4G03115 28.758 153 102 3 246 398 6 151 2.43e-12 67.0
MsG0880046759.01.T01 AT4G03115 25.847 236 167 4 161 394 16 245 1.37e-11 64.7
MsG0880046759.01.T01 AT1G74240 25.175 286 177 7 137 389 1 282 6.35e-13 69.7
MsG0880046759.01.T01 AT2G39970 22.951 305 188 8 140 398 24 327 1.30e-12 68.9
MsG0880046759.01.T01 AT5G09470 25.000 240 165 4 165 395 99 332 1.53e-12 68.6
MsG0880046759.01.T01 AT5G09470 29.082 196 123 6 117 300 143 334 9.04e-11 63.2
MsG0880046759.01.T01 AT5G14040 24.468 282 182 9 127 392 85 351 1.82e-12 68.6
MsG0880046759.01.T01 AT3G48850 28.141 199 133 4 207 398 55 250 3.24e-12 67.8
MsG0880046759.01.T01 AT3G48850 24.296 284 188 9 125 394 72 342 3.48e-11 64.7
MsG0880046759.01.T01 AT3G54110 25.000 188 129 4 119 299 113 295 1.06e-11 65.9
MsG0880046759.01.T01 AT3G54110 25.000 204 134 5 210 397 6 206 4.01e-11 63.9
MsG0880046759.01.T01 AT2G17270 23.214 280 192 7 125 394 23 289 1.23e-11 65.5
MsG0880046759.01.T01 AT2G46320 23.464 358 209 10 94 392 1 352 2.55e-11 65.1

Find 117 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGTAACCCTTGAAAATT+TGG 0.133521 8:+77745993 None:intergenic
TTAAAAGGGTAAAGATATTT+TGG 0.145088 8:+77746324 None:intergenic
TCTGGAATAAAGCTTGATTA+TGG 0.195570 8:-77746191 MsG0880046759.01.T01:CDS
GGGATTGTTCAGGGGAAATT+TGG 0.199928 8:-77745718 MsG0880046759.01.T01:CDS
TTGACCAATGCTTGCAAATA+AGG 0.238535 8:+77746148 None:intergenic
TGAAGTGTTTCAATCTATTA+TGG 0.243092 8:-77745757 MsG0880046759.01.T01:CDS
ATATTTGTTTGCATCTATAA+AGG 0.250598 8:+77744415 None:intergenic
TATCCTTTGGAAAGAATATA+TGG 0.253574 8:+77744625 None:intergenic
GGAATAGCTTCAGCCTTAAA+AGG 0.273373 8:+77746309 None:intergenic
GTAGGCTTGTATAGAGGTTT+GGG 0.282815 8:-77744762 MsG0880046759.01.T01:CDS
TGTTGGCTGCTCACCAGGTT+TGG 0.287203 8:+77745322 None:intergenic
AGCATTGGTCAAGCTGGATT+TGG 0.297922 8:-77746137 MsG0880046759.01.T01:CDS
GTTGGCTGCTCACCAGGTTT+GGG 0.304499 8:+77745323 None:intergenic
TGTAGGCTTGTATAGAGGTT+TGG 0.319304 8:-77744763 MsG0880046759.01.T01:CDS
CTTGAAAAGGAAGGGCTTGT+AGG 0.321902 8:-77744780 MsG0880046759.01.T01:CDS
GTAATAAGAGTTGGAGGATT+TGG 0.322119 8:+77746101 None:intergenic
AATATCACCCTGGTCGAAAC+TGG 0.322677 8:+77744517 None:intergenic
ATGCAAGCTGGGGCTCTAAA+TGG 0.325616 8:-77744843 MsG0880046759.01.T01:CDS
GCAATTGATGAGGCGGGAAT+TGG 0.332769 8:+77745296 None:intergenic
GATATAGTAATATGCAATTC+TGG 0.338974 8:-77746209 MsG0880046759.01.T01:CDS
CTGGAATAAAGCTTGATTAT+GGG 0.350126 8:-77746190 MsG0880046759.01.T01:CDS
GGATCAATGGCTACTGAATC+TGG 0.350533 8:-77746239 MsG0880046759.01.T01:exon
CACCATCAAATGTGTCCTTA+TGG 0.362353 8:+77745806 None:intergenic
CAATCTATTATGGAAGTTGA+TGG 0.369963 8:-77745747 MsG0880046759.01.T01:CDS
AGATAATTTGTTGCAGCATA+AGG 0.371375 8:+77745008 None:intergenic
ATGGATGGAAGGGATTGTTC+AGG 0.371579 8:-77745728 MsG0880046759.01.T01:CDS
GAATGTGATGACTCTACTAA+TGG 0.373055 8:-77744928 MsG0880046759.01.T01:CDS
CTGAGAATTGTTAGAGAAGA+AGG 0.380780 8:-77745080 MsG0880046759.01.T01:CDS
AATAACTTGTGTTGGAGCTT+AGG 0.382042 8:-77746260 MsG0880046759.01.T01:five_prime_UTR
TTCATTGAAGAGTTAAGTAT+TGG 0.382677 8:+77746050 None:intergenic
AGATACGGCATTATAACTTT+AGG 0.391568 8:-77744572 MsG0880046759.01.T01:three_prime_UTR
TTAACGTGAAATTCAAGATT+GGG 0.394844 8:-77745905 MsG0880046759.01.T01:CDS
GGAGTTTGAAAAGTAGGTTC+AGG 0.397927 8:+77746014 None:intergenic
TATTTGTTTGCATCTATAAA+GGG 0.398453 8:+77744416 None:intergenic
TTTAACGTGAAATTCAAGAT+TGG 0.402407 8:-77745906 MsG0880046759.01.T01:CDS
CAAAACTCGTCTCACTGTTC+AGG 0.404832 8:-77745219 MsG0880046759.01.T01:intron
GGACTGACACCGAGTCTAAT+CGG 0.415616 8:-77745038 MsG0880046759.01.T01:CDS
TTAAAATTAGTTCCTGCTGC+TGG 0.426884 8:-77744729 MsG0880046759.01.T01:CDS
TCAATTGCAGGGGCTGTAGC+TGG 0.427383 8:-77745281 MsG0880046759.01.T01:CDS
GGAATTGTTGGCTGCTCACC+AGG 0.428764 8:+77745317 None:intergenic
GACCATAAGGACACATTTGA+TGG 0.429663 8:-77745808 MsG0880046759.01.T01:CDS
CTCGTAAGCATATGCAAGCT+GGG 0.429821 8:-77744854 MsG0880046759.01.T01:CDS
CTACTAATGGGATCAGCTGC+TGG 0.434472 8:-77744915 MsG0880046759.01.T01:CDS
AAATTTGGAGTTTGAAAAGT+AGG 0.437917 8:+77746008 None:intergenic
TTGATAAGTGGGGCAATTGC+TGG 0.443628 8:-77745864 MsG0880046759.01.T01:CDS
GCTCGTAAGCATATGCAAGC+TGG 0.444326 8:-77744855 MsG0880046759.01.T01:CDS
GATAATTTGTTGCAGCATAA+GGG 0.447081 8:+77745009 None:intergenic
CTTATCAATCTTCTTAGTGA+TGG 0.448938 8:+77745879 None:intergenic
ACTCATGAGTATACTTGAAA+AGG 0.453834 8:-77744793 MsG0880046759.01.T01:CDS
TCAAGCTGGATTTGGATTTG+TGG 0.454184 8:-77746129 MsG0880046759.01.T01:CDS
GTGTTGGAGCTTAGGATCAA+TGG 0.454628 8:-77746252 MsG0880046759.01.T01:exon
GATGAAAGGAAGAAATTTGA+AGG 0.460865 8:-77745931 MsG0880046759.01.T01:CDS
TAAAATTAGTTCCTGCTGCT+GGG 0.466785 8:-77744728 MsG0880046759.01.T01:CDS
TGGATGGAAGGGATTGTTCA+GGG 0.470480 8:-77745727 MsG0880046759.01.T01:CDS
AAACAATTGGCTCCCAAACC+TGG 0.472120 8:-77745335 MsG0880046759.01.T01:CDS
TTTGCAAGCATTGGTCAAGC+TGG 0.476151 8:-77746143 MsG0880046759.01.T01:CDS
ATGCTTGCAAATAAGGTAGT+TGG 0.480510 8:+77746155 None:intergenic
GAAATGAAAATAACTTGTGT+TGG 0.488182 8:-77746268 MsG0880046759.01.T01:five_prime_UTR
GAGGCGGGAATTGGAATTGT+TGG 0.491811 8:+77745305 None:intergenic
CTCACCTCAATAGCCTTGCT+TGG 0.493708 8:+77745675 None:intergenic
GAATAGCTTCAGCCTTAAAA+GGG 0.493849 8:+77746310 None:intergenic
AAAGTTGTTGAGGAAAGCCT+TGG 0.502667 8:-77745957 MsG0880046759.01.T01:CDS
ACTACCTTATTTGCAAGCAT+TGG 0.504048 8:-77746152 MsG0880046759.01.T01:CDS
TGCACCAAGCAAGGCTATTG+AGG 0.504743 8:-77745679 MsG0880046759.01.T01:intron
GGGCTTGTAGGCTTGTATAG+AGG 0.505221 8:-77744768 MsG0880046759.01.T01:CDS
CACTAAGAAGATTGATAAGT+GGG 0.505340 8:-77745875 MsG0880046759.01.T01:CDS
TTCTTCCTTTCATCATGCCA+AGG 0.508145 8:+77745940 None:intergenic
AAGAACAGTTGTGGCGCCGT+TGG 0.508873 8:-77745832 MsG0880046759.01.T01:CDS
CATTTGATGGTGGGGAGTTG+TGG 0.510279 8:-77745795 MsG0880046759.01.T01:CDS
CTTGTAGTAATAAGAGTTGG+AGG 0.512749 8:+77746095 None:intergenic
ATGGAAGTTGATGGATGGAA+GGG 0.515546 8:-77745738 MsG0880046759.01.T01:CDS
TGGCGCCGTTGGAGACCATA+AGG 0.520147 8:-77745821 MsG0880046759.01.T01:CDS
ATGAGTATACTTGAAAAGGA+AGG 0.523641 8:-77744789 MsG0880046759.01.T01:CDS
GTTCCATATATTCTTTCCAA+AGG 0.524947 8:-77744628 MsG0880046759.01.T01:three_prime_UTR
GGTCCGGCGGAGTTGTATAG+AGG 0.526999 8:-77745059 MsG0880046759.01.T01:CDS
AATGTGATGACTCTACTAAT+GGG 0.537491 8:-77744927 MsG0880046759.01.T01:CDS
TCTCTTGTAGTAATAAGAGT+TGG 0.538294 8:+77746092 None:intergenic
GCCCCTGCAATTGATGAGGC+GGG 0.539465 8:+77745290 None:intergenic
TGCTTACGAGCCACCTCAAG+TGG 0.542117 8:+77744867 None:intergenic
TTCCCGCCTCATCAATTGCA+GGG 0.545694 8:-77745292 MsG0880046759.01.T01:CDS
TATGGAAGTTGATGGATGGA+AGG 0.546620 8:-77745739 MsG0880046759.01.T01:CDS
ATGAAAGGAAGAAATTTGAA+GGG 0.548190 8:-77745930 MsG0880046759.01.T01:CDS
GAATATGCTCTGTCCAACAT+AGG 0.556882 8:+77746367 None:intergenic
AATTGTTAGAGAAGAAGGTC+CGG 0.559360 8:-77745075 MsG0880046759.01.T01:CDS
ATTCCCGCCTCATCAATTGC+AGG 0.561133 8:-77745293 MsG0880046759.01.T01:CDS
ATGAAAGAAATCCCAGCAGC+AGG 0.567386 8:+77744717 None:intergenic
AGCCCCTGCAATTGATGAGG+CGG 0.568328 8:+77745289 None:intergenic
GAAAGCCTTGGCATGATGAA+AGG 0.572710 8:-77745945 MsG0880046759.01.T01:CDS
TCACTAAGAAGATTGATAAG+TGG 0.573509 8:-77745876 MsG0880046759.01.T01:CDS
CATCCGAGTTGCACCAAGCA+AGG 0.574931 8:-77745688 MsG0880046759.01.T01:CDS
TAGCCTTGCTTGGTGCAACT+CGG 0.577811 8:+77745685 None:intergenic
TGAGTATACTTGAAAAGGAA+GGG 0.583036 8:-77744788 MsG0880046759.01.T01:CDS
TAAGGACACATTTGATGGTG+GGG 0.590066 8:-77745803 MsG0880046759.01.T01:CDS
TGCAACATTCCCACTTGAGG+TGG 0.592712 8:-77744877 MsG0880046759.01.T01:CDS
CTATTATGGAAGTTGATGGA+TGG 0.598174 8:-77745743 MsG0880046759.01.T01:CDS
ATAAGGACACATTTGATGGT+GGG 0.598424 8:-77745804 MsG0880046759.01.T01:CDS
TGTGTTACGAAGCTTGCAAG+AGG 0.600032 8:-77744695 MsG0880046759.01.T01:CDS
GGATGGAAGGGATTGTTCAG+GGG 0.604327 8:-77745726 MsG0880046759.01.T01:CDS
CATAAGGACACATTTGATGG+TGG 0.614477 8:-77745805 MsG0880046759.01.T01:CDS
CAGTGCAACATTCCCACTTG+AGG 0.614515 8:-77744880 MsG0880046759.01.T01:CDS
TGAAAGGAAGAAATTTGAAG+GGG 0.616068 8:-77745929 MsG0880046759.01.T01:CDS
TCAAGGGTTACTTAATGGTG+CGG 0.622503 8:-77745985 MsG0880046759.01.T01:CDS
GGGATTACGCCGATTAGACT+CGG 0.622732 8:+77745029 None:intergenic
TGTGTCCTTATGGTCTCCAA+CGG 0.625833 8:+77745816 None:intergenic
TTAGGAAGAGAAAACAGATA+CGG 0.631261 8:-77744587 MsG0880046759.01.T01:three_prime_UTR
AGTCCTCTATACAACTCCGC+CGG 0.634935 8:+77745056 None:intergenic
TACAGCCCCTGCAATTGATG+AGG 0.635571 8:+77745286 None:intergenic
TCCCGCCTCATCAATTGCAG+GGG 0.644507 8:-77745291 MsG0880046759.01.T01:CDS
AAAATAGTAGTAGCTACTAG+TGG 0.646745 8:-77744652 MsG0880046759.01.T01:exon
TGCAGTGTCAAGAACAGTTG+TGG 0.648720 8:-77745841 MsG0880046759.01.T01:CDS
TCGTAAGCATATGCAAGCTG+GGG 0.652462 8:-77744853 MsG0880046759.01.T01:CDS
TCGAAACTGGAAAATAGTCA+AGG 0.652904 8:+77744530 None:intergenic
TGCGGCATTGAAAGTTGTTG+AGG 0.653533 8:-77745967 MsG0880046759.01.T01:CDS
CTGTACTAATAATATCACCC+TGG 0.687886 8:+77744507 None:intergenic
ACTAAGAAGATTGATAAGTG+GGG 0.694336 8:-77745874 MsG0880046759.01.T01:CDS
GCTTACGAGCCACCTCAAGT+GGG 0.700819 8:+77744868 None:intergenic
TGTTAGAGAAGAAGGTCCGG+CGG 0.710977 8:-77745072 MsG0880046759.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAAATATTATATCCTT+TGG + Chr8:77746215-77746234 None:intergenic 15.0%
!!! ATATAATATTTTTTACGCTT+AGG - Chr8:77746219-77746238 MsG0880046759.01.T01:CDS 15.0%
!!! AAAATATCTTTACCCTTTTA+AGG - Chr8:77744502-77744521 MsG0880046759.01.T01:three_prime_UTR 20.0%
!!! ACTAACAAATATGTAACTTT+TGG - Chr8:77745394-77745413 MsG0880046759.01.T01:intron 20.0%
!!! TAAAAGGGTAAAGATATTTT+GGG + Chr8:77744502-77744521 None:intergenic 20.0%
!!! TAATATTTTTACACTCACAA+AGG + Chr8:77745283-77745302 None:intergenic 20.0%
!!! TTAAAAGGGTAAAGATATTT+TGG + Chr8:77744503-77744522 None:intergenic 20.0%
!!! TTATGTATGTTTTGTAATCT+TGG - Chr8:77745181-77745200 MsG0880046759.01.T01:intron 20.0%
!!! TTCAAATTTTTAGTGATGTA+TGG + Chr8:77744539-77744558 None:intergenic 20.0%
! AAGCTGAAAAAAAAAACGAA+TGG + Chr8:77744435-77744454 None:intergenic 25.0%
! ATGAAAGGAAGAAATTTGAA+GGG - Chr8:77744894-77744913 MsG0880046759.01.T01:CDS 25.0%
! GATATAGTAATATGCAATTC+TGG - Chr8:77744615-77744634 MsG0880046759.01.T01:three_prime_UTR 25.0%
! TTAACGTGAAATTCAAGATT+GGG - Chr8:77744919-77744938 MsG0880046759.01.T01:CDS 25.0%
! TTAAGTAACCCTTGAAAATT+TGG + Chr8:77744834-77744853 None:intergenic 25.0%
! TTCATTGAAGAGTTAAGTAT+TGG + Chr8:77744777-77744796 None:intergenic 25.0%
! TTTAACGTGAAATTCAAGAT+TGG - Chr8:77744918-77744937 MsG0880046759.01.T01:CDS 25.0%
!! AAATTTGGAGTTTGAAAAGT+AGG + Chr8:77744819-77744838 None:intergenic 25.0%
!! AGTTTTTGCAAGTTTATATC+AGG - Chr8:77745241-77745260 MsG0880046759.01.T01:CDS 25.0%
!! CAAGAAAGCTTTTAATAAAG+AGG - Chr8:77745866-77745885 MsG0880046759.01.T01:CDS 25.0%
!! CTTTTAATAAAGAGGAAGTT+GGG - Chr8:77745874-77745893 MsG0880046759.01.T01:CDS 25.0%
!! GAAATGAAAATAACTTGTGT+TGG - Chr8:77744556-77744575 MsG0880046759.01.T01:three_prime_UTR 25.0%
!! TATCCTTTGGAAAGAATATA+TGG + Chr8:77746202-77746221 None:intergenic 25.0%
!! TGAAGTGTTTCAATCTATTA+TGG - Chr8:77745067-77745086 MsG0880046759.01.T01:CDS 25.0%
!! TTCAAACTCCAAATTTTCAA+GGG - Chr8:77744823-77744842 MsG0880046759.01.T01:CDS 25.0%
!! TTTCAAACTCCAAATTTTCA+AGG - Chr8:77744822-77744841 MsG0880046759.01.T01:CDS 25.0%
!!! AATTTTCAAGGGTTACTTAA+TGG - Chr8:77744834-77744853 MsG0880046759.01.T01:CDS 25.0%
AAAATAGTAGTAGCTACTAG+TGG - Chr8:77746172-77746191 MsG0880046759.01.T01:CDS 30.0%
AATGTGATGACTCTACTAAT+GGG - Chr8:77745897-77745916 MsG0880046759.01.T01:CDS 30.0%
ACTAAGAAGATTGATAAGTG+GGG - Chr8:77744950-77744969 MsG0880046759.01.T01:CDS 30.0%
ACTCATGAGTATACTTGAAA+AGG - Chr8:77746031-77746050 MsG0880046759.01.T01:CDS 30.0%
AGATACGGCATTATAACTTT+AGG - Chr8:77746252-77746271 MsG0880046759.01.T01:exon 30.0%
ATGAGTATACTTGAAAAGGA+AGG - Chr8:77746035-77746054 MsG0880046759.01.T01:CDS 30.0%
CAATCTATTATGGAAGTTGA+TGG - Chr8:77745077-77745096 MsG0880046759.01.T01:CDS 30.0%
CACTAAGAAGATTGATAAGT+GGG - Chr8:77744949-77744968 MsG0880046759.01.T01:CDS 30.0%
CTGGAATAAAGCTTGATTAT+GGG - Chr8:77744634-77744653 MsG0880046759.01.T01:three_prime_UTR 30.0%
CTTATCAATCTTCTTAGTGA+TGG + Chr8:77744948-77744967 None:intergenic 30.0%
GATGAAAGGAAGAAATTTGA+AGG - Chr8:77744893-77744912 MsG0880046759.01.T01:CDS 30.0%
GTCAAATCATCAAAAACGTT+CGG - Chr8:77745322-77745341 MsG0880046759.01.T01:CDS 30.0%
GTTCCATATATTCTTTCCAA+AGG - Chr8:77746196-77746215 MsG0880046759.01.T01:CDS 30.0%
GTTTATGCTTAATTGTAGAG+AGG - Chr8:77745693-77745712 MsG0880046759.01.T01:CDS 30.0%
TCACTAAGAAGATTGATAAG+TGG - Chr8:77744948-77744967 MsG0880046759.01.T01:CDS 30.0%
TCTCTTGTAGTAATAAGAGT+TGG + Chr8:77744735-77744754 None:intergenic 30.0%
TGAAAGGAAGAAATTTGAAG+GGG - Chr8:77744895-77744914 MsG0880046759.01.T01:CDS 30.0%
TGACACCGTAAAAAAACAAT+TGG - Chr8:77745476-77745495 MsG0880046759.01.T01:intron 30.0%
TGAGTATACTTGAAAAGGAA+GGG - Chr8:77746036-77746055 MsG0880046759.01.T01:CDS 30.0%
TTAGGAAGAGAAAACAGATA+CGG - Chr8:77746237-77746256 MsG0880046759.01.T01:exon 30.0%
! GCTTTTAATAAAGAGGAAGT+TGG - Chr8:77745873-77745892 MsG0880046759.01.T01:CDS 30.0%
! TCTGGAATAAAGCTTGATTA+TGG - Chr8:77744633-77744652 MsG0880046759.01.T01:three_prime_UTR 30.0%
!! AGATAATTTGTTGCAGCATA+AGG + Chr8:77745819-77745838 None:intergenic 30.0%
!! GATAATTTGTTGCAGCATAA+GGG + Chr8:77745818-77745837 None:intergenic 30.0%
!!! AAGATATTTTGGGACAAATG+TGG + Chr8:77744492-77744511 None:intergenic 30.0%
AATTGTTAGAGAAGAAGGTC+CGG - Chr8:77745749-77745768 MsG0880046759.01.T01:CDS 35.0%
ATGCTTGCAAATAAGGTAGT+TGG + Chr8:77744672-77744691 None:intergenic 35.0%
ATTGCATACAGTTGCATATG+AGG + Chr8:77745651-77745670 None:intergenic 35.0%
CTGAGAATTGTTAGAGAAGA+AGG - Chr8:77745744-77745763 MsG0880046759.01.T01:CDS 35.0%
CTGTACTAATAATATCACCC+TGG + Chr8:77746320-77746339 None:intergenic 35.0%
CTTGTAGTAATAAGAGTTGG+AGG + Chr8:77744732-77744751 None:intergenic 35.0%
GAATAGCTTCAGCCTTAAAA+GGG + Chr8:77744517-77744536 None:intergenic 35.0%
GAATGTGATGACTCTACTAA+TGG - Chr8:77745896-77745915 MsG0880046759.01.T01:CDS 35.0%
GTAATAAGAGTTGGAGGATT+TGG + Chr8:77744726-77744745 None:intergenic 35.0%
TAAAATTAGTTCCTGCTGCT+GGG - Chr8:77746096-77746115 MsG0880046759.01.T01:CDS 35.0%
TCGAAACTGGAAAATAGTCA+AGG + Chr8:77746297-77746316 None:intergenic 35.0%
TTAAAATTAGTTCCTGCTGC+TGG - Chr8:77746095-77746114 MsG0880046759.01.T01:CDS 35.0%
TTGACCAATGCTTGCAAATA+AGG + Chr8:77744679-77744698 None:intergenic 35.0%
! AATAACTTGTGTTGGAGCTT+AGG - Chr8:77744564-77744583 MsG0880046759.01.T01:three_prime_UTR 35.0%
! ACTACCTTATTTGCAAGCAT+TGG - Chr8:77744672-77744691 MsG0880046759.01.T01:CDS 35.0%
! AGGTGTGTACAAGAATTTTG+TGG - Chr8:77745713-77745732 MsG0880046759.01.T01:CDS 35.0%
! ATAAGGACACATTTGATGGT+GGG - Chr8:77745020-77745039 MsG0880046759.01.T01:CDS 35.0%
! GGAACTAATTTTAAGCAGCT+TGG + Chr8:77746089-77746108 None:intergenic 35.0%
!! CTATTATGGAAGTTGATGGA+TGG - Chr8:77745081-77745100 MsG0880046759.01.T01:CDS 35.0%
!! TTTTTCAGCTTCTCCTATGT+TGG - Chr8:77744444-77744463 MsG0880046759.01.T01:three_prime_UTR 35.0%
!!! GGGAGCCAATTGTTTTTTTA+CGG + Chr8:77745484-77745503 None:intergenic 35.0%
AAAGTTGTTGAGGAAAGCCT+TGG - Chr8:77744867-77744886 MsG0880046759.01.T01:CDS 40.0%
CACCATCAAATGTGTCCTTA+TGG + Chr8:77745021-77745040 None:intergenic 40.0%
CATAAACTCACATCAGCAGA+GGG + Chr8:77745680-77745699 None:intergenic 40.0%
CATAAGGACACATTTGATGG+TGG - Chr8:77745019-77745038 MsG0880046759.01.T01:CDS 40.0%
GAATATGCTCTGTCCAACAT+AGG + Chr8:77744460-77744479 None:intergenic 40.0%
GACCATAAGGACACATTTGA+TGG - Chr8:77745016-77745035 MsG0880046759.01.T01:CDS 40.0%
GGAATAGCTTCAGCCTTAAA+AGG + Chr8:77744518-77744537 None:intergenic 40.0%
GGAGTTTGAAAAGTAGGTTC+AGG + Chr8:77744813-77744832 None:intergenic 40.0%
GTAGGCTTGTATAGAGGTTT+GGG - Chr8:77746062-77746081 MsG0880046759.01.T01:CDS 40.0%
TCAAGCTGGATTTGGATTTG+TGG - Chr8:77744695-77744714 MsG0880046759.01.T01:CDS 40.0%
TCAAGGGTTACTTAATGGTG+CGG - Chr8:77744839-77744858 MsG0880046759.01.T01:CDS 40.0%
TGTAGGCTTGTATAGAGGTT+TGG - Chr8:77746061-77746080 MsG0880046759.01.T01:CDS 40.0%
TTCTTCCTTTCATCATGCCA+AGG + Chr8:77744887-77744906 None:intergenic 40.0%
! ACTATTTTCCAGTTTCGACC+AGG - Chr8:77746299-77746318 MsG0880046759.01.T01:five_prime_UTR 40.0%
! CTATTTTCCAGTTTCGACCA+GGG - Chr8:77746300-77746319 MsG0880046759.01.T01:five_prime_UTR 40.0%
!! ATGGAAGTTGATGGATGGAA+GGG - Chr8:77745086-77745105 MsG0880046759.01.T01:CDS 40.0%
!! TAAGGACACATTTGATGGTG+GGG - Chr8:77745021-77745040 MsG0880046759.01.T01:CDS 40.0%
!! TATGGAAGTTGATGGATGGA+AGG - Chr8:77745085-77745104 MsG0880046759.01.T01:CDS 40.0%
!!! AAGTATTGGACGACGTTTTG+TGG + Chr8:77744763-77744782 None:intergenic 40.0%
!!! GAGTTTTGAGTAGCTCTAGA+GGG + Chr8:77745593-77745612 None:intergenic 40.0%
AATATCACCCTGGTCGAAAC+TGG + Chr8:77746310-77746329 None:intergenic 45.0%
ATGAAAGAAATCCCAGCAGC+AGG + Chr8:77746110-77746129 None:intergenic 45.0%
ATGGATGGAAGGGATTGTTC+AGG - Chr8:77745096-77745115 MsG0880046759.01.T01:CDS 45.0%
CAAAACTCGTCTCACTGTTC+AGG - Chr8:77745605-77745624 MsG0880046759.01.T01:intron 45.0%
CTCGTAAGCATATGCAAGCT+GGG - Chr8:77745970-77745989 MsG0880046759.01.T01:CDS 45.0%
CTTGAAAAGGAAGGGCTTGT+AGG - Chr8:77746044-77746063 MsG0880046759.01.T01:CDS 45.0%
GAAAGCCTTGGCATGATGAA+AGG - Chr8:77744879-77744898 MsG0880046759.01.T01:CDS 45.0%
GCATAAACTCACATCAGCAG+AGG + Chr8:77745681-77745700 None:intergenic 45.0%
GGATCAATGGCTACTGAATC+TGG - Chr8:77744585-77744604 MsG0880046759.01.T01:three_prime_UTR 45.0%
GGGATTGTTCAGGGGAAATT+TGG - Chr8:77745106-77745125 MsG0880046759.01.T01:CDS 45.0%
GTGTTGGAGCTTAGGATCAA+TGG - Chr8:77744572-77744591 MsG0880046759.01.T01:three_prime_UTR 45.0%
TCGTAAGCATATGCAAGCTG+GGG - Chr8:77745971-77745990 MsG0880046759.01.T01:CDS 45.0%
TGCAGTGTCAAGAACAGTTG+TGG - Chr8:77744983-77745002 MsG0880046759.01.T01:CDS 45.0%
TGGATGGAAGGGATTGTTCA+GGG - Chr8:77745097-77745116 MsG0880046759.01.T01:CDS 45.0%
TGTGTCCTTATGGTCTCCAA+CGG + Chr8:77745011-77745030 None:intergenic 45.0%
TGTGTTACGAAGCTTGCAAG+AGG - Chr8:77746129-77746148 MsG0880046759.01.T01:CDS 45.0%
TTGATAAGTGGGGCAATTGC+TGG - Chr8:77744960-77744979 MsG0880046759.01.T01:CDS 45.0%
! AAACAATTGGCTCCCAAACC+TGG - Chr8:77745489-77745508 MsG0880046759.01.T01:intron 45.0%
! TGCGGCATTGAAAGTTGTTG+AGG - Chr8:77744857-77744876 MsG0880046759.01.T01:CDS 45.0%
!! AGCATTGGTCAAGCTGGATT+TGG - Chr8:77744687-77744706 MsG0880046759.01.T01:CDS 45.0%
!! TTTGCAAGCATTGGTCAAGC+TGG - Chr8:77744681-77744700 MsG0880046759.01.T01:CDS 45.0%
!!! CGAGTTTTGAGTAGCTCTAG+AGG + Chr8:77745594-77745613 None:intergenic 45.0%
AGTCCTCTATACAACTCCGC+CGG + Chr8:77745771-77745790 None:intergenic 50.0%
ATTCCCGCCTCATCAATTGC+AGG - Chr8:77745531-77745550 MsG0880046759.01.T01:intron 50.0%
CAGTGCAACATTCCCACTTG+AGG - Chr8:77745944-77745963 MsG0880046759.01.T01:CDS 50.0%
CGTGACGTGAGACCCTTTAT+AGG - Chr8:77746396-77746415 MsG0880046759.01.T01:five_prime_UTR 50.0%
CTACTAATGGGATCAGCTGC+TGG - Chr8:77745909-77745928 MsG0880046759.01.T01:CDS 50.0%
GAGGCGGGAATTGGAATTGT+TGG + Chr8:77745522-77745541 None:intergenic 50.0%
GCAATTGATGAGGCGGGAAT+TGG + Chr8:77745531-77745550 None:intergenic 50.0%
GCTCGTAAGCATATGCAAGC+TGG - Chr8:77745969-77745988 MsG0880046759.01.T01:CDS 50.0%
GGACTGACACCGAGTCTAAT+CGG - Chr8:77745786-77745805 MsG0880046759.01.T01:CDS 50.0%
GGATGGAAGGGATTGTTCAG+GGG - Chr8:77745098-77745117 MsG0880046759.01.T01:CDS 50.0%
GGGCTTGTAGGCTTGTATAG+AGG - Chr8:77746056-77746075 MsG0880046759.01.T01:CDS 50.0%
TACAGCCCCTGCAATTGATG+AGG + Chr8:77745541-77745560 None:intergenic 50.0%
TGCAACATTCCCACTTGAGG+TGG - Chr8:77745947-77745966 MsG0880046759.01.T01:CDS 50.0%
TGCACCAAGCAAGGCTATTG+AGG - Chr8:77745145-77745164 MsG0880046759.01.T01:intron 50.0%
TGTTAGAGAAGAAGGTCCGG+CGG - Chr8:77745752-77745771 MsG0880046759.01.T01:CDS 50.0%
TTCCCGCCTCATCAATTGCA+GGG - Chr8:77745532-77745551 MsG0880046759.01.T01:intron 50.0%
! CTCACCTCAATAGCCTTGCT+TGG + Chr8:77745152-77745171 None:intergenic 50.0%
! GGGATTACGCCGATTAGACT+CGG + Chr8:77745798-77745817 None:intergenic 50.0%
!! ATGCAAGCTGGGGCTCTAAA+TGG - Chr8:77745981-77746000 MsG0880046759.01.T01:CDS 50.0%
!! CATTTGATGGTGGGGAGTTG+TGG - Chr8:77745029-77745048 MsG0880046759.01.T01:CDS 50.0%
!! TAGCCTTGCTTGGTGCAACT+CGG + Chr8:77745142-77745161 None:intergenic 50.0%
AAGAACAGTTGTGGCGCCGT+TGG - Chr8:77744992-77745011 MsG0880046759.01.T01:CDS 55.0%
AGCCCCTGCAATTGATGAGG+CGG + Chr8:77745538-77745557 None:intergenic 55.0%
CATCCGAGTTGCACCAAGCA+AGG - Chr8:77745136-77745155 MsG0880046759.01.T01:intron 55.0%
GCTTACGAGCCACCTCAAGT+GGG + Chr8:77745959-77745978 None:intergenic 55.0%
GTTGGCTGCTCACCAGGTTT+GGG + Chr8:77745504-77745523 None:intergenic 55.0%
TCAATTGCAGGGGCTGTAGC+TGG - Chr8:77745543-77745562 MsG0880046759.01.T01:intron 55.0%
TCCCGCCTCATCAATTGCAG+GGG - Chr8:77745533-77745552 MsG0880046759.01.T01:intron 55.0%
TGCTTACGAGCCACCTCAAG+TGG + Chr8:77745960-77745979 None:intergenic 55.0%
! GGAATTGTTGGCTGCTCACC+AGG + Chr8:77745510-77745529 None:intergenic 55.0%
! TGTTGGCTGCTCACCAGGTT+TGG + Chr8:77745505-77745524 None:intergenic 55.0%
GCCCCTGCAATTGATGAGGC+GGG + Chr8:77745537-77745556 None:intergenic 60.0%
GGTCCGGCGGAGTTGTATAG+AGG - Chr8:77745765-77745784 MsG0880046759.01.T01:CDS 60.0%
TGGCGCCGTTGGAGACCATA+AGG - Chr8:77745003-77745022 MsG0880046759.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 77744429 77746417 77744429 ID=MsG0880046759.01;Name=MsG0880046759.01
Chr8 mRNA 77744429 77746417 77744429 ID=MsG0880046759.01.T01;Parent=MsG0880046759.01;Name=MsG0880046759.01.T01;_AED=0.13;_eAED=0.13;_QI=162|1|1|1|1|1|3|239|401
Chr8 exon 77744429 77745135 77744429 ID=MsG0880046759.01.T01:exon:18484;Parent=MsG0880046759.01.T01
Chr8 exon 77745220 77745381 77745220 ID=MsG0880046759.01.T01:exon:18483;Parent=MsG0880046759.01.T01
Chr8 exon 77745680 77746417 77745680 ID=MsG0880046759.01.T01:exon:18482;Parent=MsG0880046759.01.T01
Chr8 five_prime_UTR 77746256 77746417 77746256 ID=MsG0880046759.01.T01:five_prime_utr;Parent=MsG0880046759.01.T01
Chr8 CDS 77745680 77746255 77745680 ID=MsG0880046759.01.T01:cds;Parent=MsG0880046759.01.T01
Chr8 CDS 77745220 77745381 77745220 ID=MsG0880046759.01.T01:cds;Parent=MsG0880046759.01.T01
Chr8 CDS 77744668 77745135 77744668 ID=MsG0880046759.01.T01:cds;Parent=MsG0880046759.01.T01
Chr8 three_prime_UTR 77744429 77744667 77744429 ID=MsG0880046759.01.T01:three_prime_utr;Parent=MsG0880046759.01.T01
Gene Sequence

>MsG0880046759.01.T01

ATGGCTACTGAATCTGGTTATAGAGATATAGTAATATGCAATTCTGGAATAAAGCTTGATTATGGGACTAATCTTCATCCAACTACCTTATTTGCAAGCATTGGTCAAGCTGGATTTGGATTTGTGGCTTCACCAAATCCTCCAACTCTTATTACTACAAGAGATAGTGCCACAAAACGTCGTCCAATACTTAACTCTTCAATGAAATATGCTTTAATTCCTGAACCTACTTTTCAAACTCCAAATTTTCAAGGGTTACTTAATGGTGCGGCATTGAAAGTTGTTGAGGAAAGCCTTGGCATGATGAAAGGAAGAAATTTGAAGGGGTTTAACGTGAAATTCAAGATTGGGAATCCATCACTAAGAAGATTGATAAGTGGGGCAATTGCTGGTGCAGTGTCAAGAACAGTTGTGGCGCCGTTGGAGACCATAAGGACACATTTGATGGTGGGGAGTTGTGGACATAATACAACTCGTGAAGTGTTTCAATCTATTATGGAAGTTGATGGATGGAAGGGATTGTTCAGGGGAAATTTGGTGAATATCATCCGAGTTGCACCAAGCAAGGCTATTGAGTTATTTGCGTATGACACCGTAAAAAAACAATTGGCTCCCAAACCTGGTGAGCAGCCAACAATTCCAATTCCCGCCTCATCAATTGCAGGGGCTGTAGCTGGAGTTAGCTCTACGCTATGCACATACCCTCTAGAGCTACTCAAAACTCGTCTCACTGTTCAGAGAGGTGTGTACAAGAATTTTGTGGATGCATTTCTGAGAATTGTTAGAGAAGAAGGTCCGGCGGAGTTGTATAGAGGACTGACACCGAGTCTAATCGGCGTAATCCCTTATGCTGCAACAAATTATCTAGCTTATGATACACTTAGAAAAGCTTACAAGAAAGCTTTTAATAAAGAGGAAGTTGGGAATGTGATGACTCTACTAATGGGATCAGCTGCTGGAGCATTTTCATGCAGTGCAACATTCCCACTTGAGGTGGCTCGTAAGCATATGCAAGCTGGGGCTCTAAATGGAAGACAATACAGTAACATGCTTCAAGCACTCATGAGTATACTTGAAAAGGAAGGGCTTGTAGGCTTGTATAGAGGTTTGGGACCAAGCTGCTTAAAATTAGTTCCTGCTGCTGGGATTTCTTTCATGTGTTACGAAGCTTGCAAGAGGTTACTTGTTGAAAATGAAGAAAAATAG

Protein sequence

>MsG0880046759.01.T01

MATESGYRDIVICNSGIKLDYGTNLHPTTLFASIGQAGFGFVASPNPPTLITTRDSATKRRPILNSSMKYALIPEPTFQTPNFQGLLNGAALKVVEESLGMMKGRNLKGFNVKFKIGNPSLRRLISGAIAGAVSRTVVAPLETIRTHLMVGSCGHNTTREVFQSIMEVDGWKGLFRGNLVNIIRVAPSKAIELFAYDTVKKQLAPKPGEQPTIPIPASSIAGAVAGVSSTLCTYPLELLKTRLTVQRGVYKNFVDAFLRIVREEGPAELYRGLTPSLIGVIPYAATNYLAYDTLRKAYKKAFNKEEVGNVMTLLMGSAAGAFSCSATFPLEVARKHMQAGALNGRQYSNMLQALMSILEKEGLVGLYRGLGPSCLKLVPAAGISFMCYEACKRLLVENEEK*