Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018121.01.T01 | KEH33222.1 | 79.082 | 196 | 37 | 1 | 1 | 192 | 1 | 196 | 5.53E-107 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018121.01.T01 | A0A072UU99 | 79.082 | 196 | 37 | 1 | 1 | 192 | 1 | 196 | 2.64e-107 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000470.01 | MsG0480018121.01 | 0.817508 | 3.180383e-52 | 2.320627e-49 |
| MsG0180002282.01 | MsG0480018121.01 | 0.800506 | 1.395993e-48 | 6.511226e-46 |
| MsG0180002667.01 | MsG0480018121.01 | 0.825094 | 5.652024e-54 | 5.101856e-51 |
| MsG0180003673.01 | MsG0480018121.01 | 0.824665 | 7.135306e-54 | 6.362626e-51 |
| MsG0180003686.01 | MsG0480018121.01 | 0.818599 | 1.802061e-52 | 1.354861e-49 |
| MsG0180004275.01 | MsG0480018121.01 | 0.832840 | 7.513541e-56 | 8.498964e-53 |
| MsG0180005185.01 | MsG0480018121.01 | 0.808910 | 2.454823e-50 | 1.421058e-47 |
| MsG0180006134.01 | MsG0480018121.01 | 0.859198 | 4.882827e-63 | 1.278956e-59 |
| MsG0280006325.01 | MsG0480018121.01 | 0.829545 | 4.847856e-55 | 4.976919e-52 |
| MsG0280011032.01 | MsG0480018121.01 | 0.802997 | 4.300968e-49 | 2.136933e-46 |
| MsG0380012330.01 | MsG0480018121.01 | 0.813945 | 1.979790e-51 | 1.310713e-48 |
| MsG0380012361.01 | MsG0480018121.01 | 0.816290 | 5.967087e-52 | 4.211388e-49 |
| MsG0380013176.01 | MsG0480018121.01 | 0.806671 | 7.347080e-50 | 4.011365e-47 |
| MsG0380016274.01 | MsG0480018121.01 | 0.824915 | 6.232655e-54 | 5.597303e-51 |
| MsG0380017048.01 | MsG0480018121.01 | 0.817843 | 2.672310e-52 | 1.967884e-49 |
| MsG0380017060.01 | MsG0480018121.01 | 0.800923 | 1.147407e-48 | 5.409006e-46 |
| MsG0380017220.01 | MsG0480018121.01 | 0.805427 | 1.341870e-49 | 7.097234e-47 |
| MsG0380017326.01 | MsG0480018121.01 | 0.825426 | 4.718357e-54 | 4.298995e-51 |
| MsG0380017543.01 | MsG0480018121.01 | 0.811724 | 6.066456e-51 | 3.783702e-48 |
| MsG0480018121.01 | MsG0480018236.01 | 0.813203 | 2.882217e-51 | 1.870113e-48 |
| MsG0480018121.01 | MsG0480018318.01 | 0.812706 | 3.705170e-51 | 2.372473e-48 |
| MsG0480018121.01 | MsG0480018664.01 | 0.812849 | 3.446264e-51 | 2.214901e-48 |
| MsG0480018121.01 | MsG0480018778.01 | 0.808892 | 2.477412e-50 | 1.433399e-47 |
| MsG0480018121.01 | MsG0480019435.01 | 0.820534 | 6.519855e-53 | 5.172488e-50 |
| MsG0480018121.01 | MsG0480021276.01 | 0.803231 | 3.848229e-49 | 1.923508e-46 |
| MsG0480018121.01 | MsG0480022262.01 | 0.801835 | 7.464008e-49 | 3.600550e-46 |
| MsG0480018121.01 | MsG0480023248.01 | 0.803670 | 3.120817e-49 | 1.577594e-46 |
| MsG0480018121.01 | MsG0580024306.01 | 0.821836 | 3.267379e-53 | 2.688297e-50 |
| MsG0480018121.01 | MsG0580025758.01 | 0.819056 | 1.419247e-52 | 1.080661e-49 |
| MsG0480018121.01 | MsG0580025934.01 | 0.811190 | 7.924450e-51 | 4.873266e-48 |
| MsG0480018121.01 | MsG0580026613.01 | 0.834263 | 3.317064e-56 | 3.915876e-53 |
| MsG0480018121.01 | MsG0580027152.01 | 0.801874 | 7.328485e-49 | 3.538827e-46 |
| MsG0480018121.01 | MsG0580028169.01 | 0.814459 | 1.524426e-51 | 1.023461e-48 |
| MsG0480018121.01 | MsG0580028170.01 | 0.812624 | 3.861292e-51 | 2.467119e-48 |
| MsG0480018121.01 | MsG0680030299.01 | 0.813698 | 2.244182e-51 | 1.475925e-48 |
| MsG0480018121.01 | MsG0680030561.01 | 0.805184 | 1.508635e-49 | 7.929632e-47 |
| MsG0480018121.01 | MsG0680030995.01 | 0.800857 | 1.183624e-48 | 5.570444e-46 |
| MsG0480018121.01 | MsG0680032157.01 | 0.823114 | 1.649106e-53 | 1.407071e-50 |
| MsG0480018121.01 | MsG0780036080.01 | 0.802610 | 5.170188e-49 | 2.543705e-46 |
| MsG0480018121.01 | MsG0780036128.01 | 0.805946 | 1.044329e-49 | 5.597739e-47 |
| MsG0480018121.01 | MsG0780037606.01 | 0.800256 | 1.569830e-48 | 7.275868e-46 |
| MsG0480018121.01 | MsG0880042616.01 | 0.802877 | 4.553001e-49 | 2.255388e-46 |
| MsG0480018121.01 | MsG0880043812.01 | 0.808595 | 2.866435e-50 | 1.645678e-47 |
| MsG0480018121.01 | MsG0880045371.01 | 0.807475 | 4.963496e-50 | 2.767300e-47 |
| MsG0280006590.01 | MsG0480018121.01 | 0.803224 | 3.860304e-49 | 1.929244e-46 |
| MsG0280007072.01 | MsG0480018121.01 | 0.800032 | 1.742948e-48 | 8.032459e-46 |
| MsG0280007864.01 | MsG0480018121.01 | -0.804628 | 1.972121e-49 | 1.021788e-46 |
| MsG0280008166.01 | MsG0480018121.01 | 0.806487 | 8.033699e-50 | 4.365871e-47 |
| MsG0280009024.01 | MsG0480018121.01 | 0.819391 | 1.190394e-52 | 9.147830e-50 |
| MsG0280009421.01 | MsG0480018121.01 | 0.836074 | 1.158191e-56 | 1.443693e-53 |
| MsG0280010117.01 | MsG0480018121.01 | 0.807605 | 4.658092e-50 | 2.605655e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018121.01.T01 | MTR_3g028620 | 79.082 | 196 | 37 | 1 | 1 | 192 | 1 | 196 | 6.70e-111 | 315 |
| MsG0480018121.01.T01 | MTR_8g470030 | 77.551 | 196 | 40 | 1 | 1 | 192 | 1 | 196 | 1.22e-106 | 304 |
| MsG0480018121.01.T01 | MTR_5g044895 | 78.061 | 196 | 39 | 1 | 1 | 192 | 1 | 196 | 8.05e-106 | 302 |
| MsG0480018121.01.T01 | MTR_5g072370 | 77.041 | 196 | 41 | 1 | 1 | 192 | 1 | 196 | 2.36e-105 | 301 |
| MsG0480018121.01.T01 | MTR_4g045603 | 76.531 | 196 | 42 | 1 | 1 | 192 | 1 | 196 | 6.75e-105 | 300 |
| MsG0480018121.01.T01 | MTR_3g060830 | 77.041 | 196 | 41 | 1 | 1 | 192 | 1 | 196 | 7.05e-105 | 300 |
| MsG0480018121.01.T01 | MTR_6g043270 | 76.020 | 196 | 43 | 1 | 1 | 192 | 1 | 196 | 1.30e-102 | 294 |
| MsG0480018121.01.T01 | MTR_0083s0070 | 81.143 | 175 | 29 | 1 | 22 | 192 | 1 | 175 | 4.20e-102 | 292 |
| MsG0480018121.01.T01 | MTR_5g067630 | 72.959 | 196 | 49 | 1 | 1 | 192 | 1 | 196 | 3.54e-99 | 285 |
| MsG0480018121.01.T01 | MTR_7g061620 | 73.469 | 196 | 48 | 1 | 1 | 192 | 1 | 196 | 4.61e-99 | 285 |
| MsG0480018121.01.T01 | MTR_2g058650 | 72.959 | 196 | 49 | 1 | 1 | 192 | 1 | 196 | 1.47e-98 | 283 |
| MsG0480018121.01.T01 | MTR_5g009790 | 73.333 | 195 | 48 | 1 | 1 | 191 | 1 | 195 | 6.22e-98 | 287 |
| MsG0480018121.01.T01 | MTR_0005s0220 | 70.918 | 196 | 53 | 1 | 1 | 192 | 1 | 196 | 1.83e-97 | 281 |
| MsG0480018121.01.T01 | MTR_7g061360 | 72.449 | 196 | 50 | 1 | 1 | 192 | 1 | 196 | 2.84e-97 | 280 |
| MsG0480018121.01.T01 | MTR_5g063995 | 71.939 | 196 | 51 | 1 | 1 | 192 | 1 | 196 | 3.10e-97 | 280 |
| MsG0480018121.01.T01 | MTR_0214s0030 | 77.714 | 175 | 35 | 1 | 22 | 192 | 1 | 175 | 6.46e-95 | 273 |
| MsG0480018121.01.T01 | MTR_8g466300 | 71.939 | 196 | 44 | 2 | 1 | 192 | 1 | 189 | 9.34e-95 | 274 |
| MsG0480018121.01.T01 | MTR_4g069290 | 67.500 | 200 | 57 | 2 | 1 | 192 | 1 | 200 | 1.19e-90 | 264 |
| MsG0480018121.01.T01 | MTR_2g061240 | 79.487 | 156 | 32 | 0 | 37 | 192 | 3 | 158 | 8.36e-90 | 260 |
| MsG0480018121.01.T01 | MTR_1g036730 | 65.816 | 196 | 63 | 1 | 1 | 192 | 5 | 200 | 1.38e-88 | 258 |
| MsG0480018121.01.T01 | MTR_5g048800 | 73.714 | 175 | 42 | 1 | 22 | 192 | 1 | 175 | 6.52e-88 | 256 |
| MsG0480018121.01.T01 | MTR_0360s0010 | 73.596 | 178 | 40 | 2 | 22 | 192 | 1 | 178 | 1.35e-87 | 255 |
| MsG0480018121.01.T01 | MTR_2g083590 | 63.265 | 196 | 67 | 2 | 1 | 192 | 5 | 199 | 2.88e-84 | 248 |
| MsG0480018121.01.T01 | MTR_4g054700 | 76.471 | 153 | 36 | 0 | 40 | 192 | 11 | 163 | 6.73e-83 | 243 |
| MsG0480018121.01.T01 | MTR_5g053480 | 63.265 | 196 | 67 | 2 | 1 | 192 | 5 | 199 | 1.71e-82 | 243 |
| MsG0480018121.01.T01 | MTR_3g033840 | 79.355 | 155 | 28 | 1 | 10 | 160 | 2 | 156 | 1.45e-80 | 236 |
| MsG0480018121.01.T01 | MTR_6g042710 | 65.294 | 170 | 55 | 1 | 27 | 192 | 1 | 170 | 2.50e-73 | 219 |
| MsG0480018121.01.T01 | MTR_5g055710 | 77.372 | 137 | 31 | 0 | 56 | 192 | 10 | 146 | 2.80e-72 | 215 |
| MsG0480018121.01.T01 | MTR_7g055890 | 56.000 | 200 | 80 | 2 | 1 | 192 | 1 | 200 | 4.95e-72 | 216 |
| MsG0480018121.01.T01 | MTR_0520s0020 | 75.556 | 135 | 33 | 0 | 58 | 192 | 1 | 135 | 8.00e-72 | 214 |
| MsG0480018121.01.T01 | MTR_7g051090 | 64.118 | 170 | 57 | 1 | 27 | 192 | 1 | 170 | 1.20e-71 | 214 |
| MsG0480018121.01.T01 | MTR_6g036940 | 54.286 | 210 | 78 | 3 | 1 | 192 | 5 | 214 | 6.87e-70 | 212 |
| MsG0480018121.01.T01 | MTR_7g056780 | 66.438 | 146 | 47 | 2 | 48 | 192 | 17 | 161 | 1.33e-63 | 194 |
| MsG0480018121.01.T01 | MTR_8g479440 | 82.203 | 118 | 21 | 0 | 43 | 160 | 38 | 155 | 3.83e-62 | 190 |
| MsG0480018121.01.T01 | MTR_5g080380 | 63.889 | 144 | 48 | 1 | 27 | 166 | 1 | 144 | 2.31e-58 | 180 |
| MsG0480018121.01.T01 | MTR_6g044850 | 63.333 | 120 | 44 | 0 | 73 | 192 | 1 | 120 | 5.94e-53 | 165 |
| MsG0480018121.01.T01 | MTR_3g117535 | 75.248 | 101 | 25 | 0 | 92 | 192 | 9 | 109 | 5.86e-51 | 160 |
| MsG0480018121.01.T01 | MTR_4g061900 | 60.294 | 136 | 50 | 1 | 1 | 132 | 23 | 158 | 1.05e-50 | 161 |
| MsG0480018121.01.T01 | MTR_3g034005 | 80.000 | 90 | 18 | 0 | 103 | 192 | 1 | 90 | 8.22e-49 | 154 |
| MsG0480018121.01.T01 | MTR_5g084150 | 58.065 | 124 | 52 | 0 | 69 | 192 | 64 | 187 | 2.76e-48 | 155 |
| MsG0480018121.01.T01 | MTR_6g466390 | 82.759 | 87 | 15 | 0 | 50 | 136 | 23 | 109 | 7.61e-47 | 151 |
| MsG0480018121.01.T01 | MTR_3g034000 | 71.000 | 100 | 25 | 1 | 1 | 96 | 1 | 100 | 6.24e-43 | 139 |
| MsG0480018121.01.T01 | MTR_1g053405 | 64.286 | 112 | 32 | 2 | 1 | 104 | 24 | 135 | 1.77e-41 | 137 |
| MsG0480018121.01.T01 | MTR_0134s0030 | 68.889 | 90 | 28 | 0 | 103 | 192 | 1 | 90 | 6.58e-38 | 126 |
| MsG0480018121.01.T01 | MTR_4g022300 | 58.182 | 110 | 42 | 1 | 10 | 115 | 2 | 111 | 2.49e-35 | 120 |
| MsG0480018121.01.T01 | MTR_8g075640 | 68.182 | 88 | 24 | 1 | 1 | 84 | 1 | 88 | 4.75e-34 | 116 |
| MsG0480018121.01.T01 | MTR_4g026610 | 45.238 | 84 | 34 | 1 | 55 | 126 | 1 | 84 | 8.64e-15 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCTTCTTCCTCTTCTT+TGG | 0.229861 | 4:+449825 | None:intergenic |
| ATATCTACACTCCTTACTTT+TGG | 0.254953 | 4:+450002 | None:intergenic |
| ACTTCTTTGTTACAAATTCA+TGG | 0.267623 | 4:-449856 | MsG0480018121.01.T01:CDS |
| TTCTCAAAGTCTGAACCAAC+AGG | 0.368570 | 4:-449978 | MsG0480018121.01.T01:CDS |
| GTCTGAACCAACAGGGGTTA+AGG | 0.381696 | 4:-449970 | MsG0480018121.01.T01:CDS |
| GGAAATCACTTGTGTGCAAT+TGG | 0.407497 | 4:-449949 | MsG0480018121.01.T01:CDS |
| TGGATGAATGTCCTTCTCTA+AGG | 0.407954 | 4:-449929 | MsG0480018121.01.T01:CDS |
| TGCGCTCACAGTTAAACCTT+TGG | 0.411587 | 4:+449890 | None:intergenic |
| TCTTCTTCCTCTTCTTTGGT+AGG | 0.418562 | 4:+449829 | None:intergenic |
| TTCCCTTCACCATCACTACC+TGG | 0.455355 | 4:+450215 | None:intergenic |
| CTCGAGTTGTGGTCATTATG+AGG | 0.481821 | 4:-450246 | MsG0480018121.01.T01:CDS |
| GCAAAGGAAGTTGGTTAAGA+TGG | 0.486781 | 4:-450060 | MsG0480018121.01.T01:CDS |
| TGGAAGAAAATCCAAAAGTA+AGG | 0.496893 | 4:-450013 | MsG0480018121.01.T01:CDS |
| TGATGGTGAAGGGAAGAAAG+AGG | 0.512770 | 4:-450207 | MsG0480018121.01.T01:CDS |
| CTGCAACTTAGCAATCTCTT+CGG | 0.512827 | 4:+450319 | None:intergenic |
| AAGGTTTAACTGTGAGCGCA+TGG | 0.518253 | 4:-449887 | MsG0480018121.01.T01:CDS |
| ACATGAGTCGCAAAGGAAGT+TGG | 0.528803 | 4:-450069 | MsG0480018121.01.T01:CDS |
| GTGATTTCCTTAACCCCTGT+TGG | 0.540189 | 4:+449963 | None:intergenic |
| CGCTTCAACCACTGTTAGGG+TGG | 0.541287 | 4:+449777 | None:intergenic |
| TGGGATAGCTTAAATTCCAA+AGG | 0.551642 | 4:-449906 | MsG0480018121.01.T01:CDS |
| ATGAATGTCCTTCTCTAAGG+TGG | 0.555194 | 4:-449926 | MsG0480018121.01.T01:CDS |
| CAATCTCTTCGGTGTCATAG+AGG | 0.561410 | 4:+450330 | None:intergenic |
| ACCAAAGAAGAGGAAGAAGA+AGG | 0.563516 | 4:-449826 | MsG0480018121.01.T01:CDS |
| CATTATGAGGCGAATCAACC+AGG | 0.564776 | 4:-450233 | MsG0480018121.01.T01:CDS |
| AAGCTATCCCACCTTAGAGA+AGG | 0.585524 | 4:+449918 | None:intergenic |
| GCGAATCAACCAGGTAGTGA+TGG | 0.586093 | 4:-450224 | MsG0480018121.01.T01:CDS |
| TGAATGTCCTTCTCTAAGGT+GGG | 0.589541 | 4:-449925 | MsG0480018121.01.T01:CDS |
| TGAGTGTCACGAGGTTGTGT+TGG | 0.595153 | 4:-450033 | MsG0480018121.01.T01:CDS |
| CTCAAAGTCTGAACCAACAG+GGG | 0.596555 | 4:-449976 | MsG0480018121.01.T01:CDS |
| TGGAATTCCTACCAAAGAAG+AGG | 0.597578 | 4:-449836 | MsG0480018121.01.T01:CDS |
| AGGTTTAACTGTGAGCGCAT+GGG | 0.597765 | 4:-449886 | MsG0480018121.01.T01:CDS |
| CAACCAGGTAGTGATGGTGA+AGG | 0.615922 | 4:-450218 | MsG0480018121.01.T01:CDS |
| GACAACAAAATCTCGAGTTG+TGG | 0.616717 | 4:-450257 | MsG0480018121.01.T01:CDS |
| TCTCAAAGTCTGAACCAACA+GGG | 0.619042 | 4:-449977 | MsG0480018121.01.T01:CDS |
| AGAAAGCACATGAGTCGCAA+AGG | 0.623323 | 4:-450076 | MsG0480018121.01.T01:CDS |
| AACCAGGTAGTGATGGTGAA+GGG | 0.627173 | 4:-450217 | MsG0480018121.01.T01:CDS |
| GAGAAGTTTGATGTTCAGTG+TGG | 0.683538 | 4:-450110 | MsG0480018121.01.T01:CDS |
| GATGGAGACTGAGTGTCACG+AGG | 0.720575 | 4:-450042 | MsG0480018121.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTAGATGAATTCT+TGG | - | Chr4:449985-450004 | MsG0480018121.01.T01:CDS | 15.0% |
| !!! | ATCTTTTAAGATCAAAATTT+TGG | - | Chr4:449859-449878 | MsG0480018121.01.T01:CDS | 15.0% |
| ! | ACTTCTTTGTTACAAATTCA+TGG | - | Chr4:450282-450301 | MsG0480018121.01.T01:CDS | 25.0% |
| TGGAAGAAAATCCAAAAGTA+AGG | - | Chr4:450125-450144 | MsG0480018121.01.T01:CDS | 30.0% | |
| ! | ATATCTACACTCCTTACTTT+TGG | + | Chr4:450139-450158 | None:intergenic | 30.0% |
| TGGGATAGCTTAAATTCCAA+AGG | - | Chr4:450232-450251 | MsG0480018121.01.T01:CDS | 35.0% | |
| ACCAAAGAAGAGGAAGAAGA+AGG | - | Chr4:450312-450331 | MsG0480018121.01.T01:CDS | 40.0% | |
| CTGCAACTTAGCAATCTCTT+CGG | + | Chr4:449822-449841 | None:intergenic | 40.0% | |
| GAGAAGTTTGATGTTCAGTG+TGG | - | Chr4:450028-450047 | MsG0480018121.01.T01:CDS | 40.0% | |
| GGAAATCACTTGTGTGCAAT+TGG | - | Chr4:450189-450208 | MsG0480018121.01.T01:CDS | 40.0% | |
| TCCTTCTTCTTCCTCTTCTT+TGG | + | Chr4:450316-450335 | None:intergenic | 40.0% | |
| TCTCAAAGTCTGAACCAACA+GGG | - | Chr4:450161-450180 | MsG0480018121.01.T01:CDS | 40.0% | |
| TCTTCTTCCTCTTCTTTGGT+AGG | + | Chr4:450312-450331 | None:intergenic | 40.0% | |
| TGGAATTCCTACCAAAGAAG+AGG | - | Chr4:450302-450321 | MsG0480018121.01.T01:CDS | 40.0% | |
| TGGATGAATGTCCTTCTCTA+AGG | - | Chr4:450209-450228 | MsG0480018121.01.T01:CDS | 40.0% | |
| TTCTCAAAGTCTGAACCAAC+AGG | - | Chr4:450160-450179 | MsG0480018121.01.T01:CDS | 40.0% | |
| ! | ATGAATGTCCTTCTCTAAGG+TGG | - | Chr4:450212-450231 | MsG0480018121.01.T01:CDS | 40.0% |
| ! | GACAACAAAATCTCGAGTTG+TGG | - | Chr4:449881-449900 | MsG0480018121.01.T01:CDS | 40.0% |
| ! | GCAAAGGAAGTTGGTTAAGA+TGG | - | Chr4:450078-450097 | MsG0480018121.01.T01:CDS | 40.0% |
| !! | TGAATGTCCTTCTCTAAGGT+GGG | - | Chr4:450213-450232 | MsG0480018121.01.T01:CDS | 40.0% |
| AAGCTATCCCACCTTAGAGA+AGG | + | Chr4:450223-450242 | None:intergenic | 45.0% | |
| AAGGTTTAACTGTGAGCGCA+TGG | - | Chr4:450251-450270 | MsG0480018121.01.T01:CDS | 45.0% | |
| ACATGAGTCGCAAAGGAAGT+TGG | - | Chr4:450069-450088 | MsG0480018121.01.T01:CDS | 45.0% | |
| AGGTTTAACTGTGAGCGCAT+GGG | - | Chr4:450252-450271 | MsG0480018121.01.T01:CDS | 45.0% | |
| CATTATGAGGCGAATCAACC+AGG | - | Chr4:449905-449924 | MsG0480018121.01.T01:CDS | 45.0% | |
| CTCAAAGTCTGAACCAACAG+GGG | - | Chr4:450162-450181 | MsG0480018121.01.T01:CDS | 45.0% | |
| GTGATTTCCTTAACCCCTGT+TGG | + | Chr4:450178-450197 | None:intergenic | 45.0% | |
| TGCGCTCACAGTTAAACCTT+TGG | + | Chr4:450251-450270 | None:intergenic | 45.0% | |
| ! | AACCAGGTAGTGATGGTGAA+GGG | - | Chr4:449921-449940 | MsG0480018121.01.T01:CDS | 45.0% |
| ! | AGAAAGCACATGAGTCGCAA+AGG | - | Chr4:450062-450081 | MsG0480018121.01.T01:CDS | 45.0% |
| ! | CTCGAGTTGTGGTCATTATG+AGG | - | Chr4:449892-449911 | MsG0480018121.01.T01:CDS | 45.0% |
| ! | TGATGGTGAAGGGAAGAAAG+AGG | - | Chr4:449931-449950 | MsG0480018121.01.T01:CDS | 45.0% |
| !! | CAATCTCTTCGGTGTCATAG+AGG | + | Chr4:449811-449830 | None:intergenic | 45.0% |
| GCGAATCAACCAGGTAGTGA+TGG | - | Chr4:449914-449933 | MsG0480018121.01.T01:CDS | 50.0% | |
| GTCTGAACCAACAGGGGTTA+AGG | - | Chr4:450168-450187 | MsG0480018121.01.T01:CDS | 50.0% | |
| TGAGTGTCACGAGGTTGTGT+TGG | - | Chr4:450105-450124 | MsG0480018121.01.T01:CDS | 50.0% | |
| TTCCCTTCACCATCACTACC+TGG | + | Chr4:449926-449945 | None:intergenic | 50.0% | |
| ! | CAACCAGGTAGTGATGGTGA+AGG | - | Chr4:449920-449939 | MsG0480018121.01.T01:CDS | 50.0% |
| GATGGAGACTGAGTGTCACG+AGG | - | Chr4:450096-450115 | MsG0480018121.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 449791 | 450369 | 449791 | ID=MsG0480018121.01;Name=MsG0480018121.01 |
| Chr4 | mRNA | 449791 | 450369 | 449791 | ID=MsG0480018121.01.T01;Parent=MsG0480018121.01;Name=MsG0480018121.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|192 |
| Chr4 | exon | 449791 | 450369 | 449791 | ID=MsG0480018121.01.T01:exon:634;Parent=MsG0480018121.01.T01 |
| Chr4 | CDS | 449791 | 450369 | 449791 | ID=MsG0480018121.01.T01:cds;Parent=MsG0480018121.01.T01 |
| Gene Sequence |
| Protein sequence |
