AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007092.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007092.01.T01 MTR_2g020510 79.770 697 43 4 1 603 1 693 0.0 1092
MsG0280007092.01.T01 MTR_2g020470 77.761 679 71 5 1 603 1 675 0.0 1035
MsG0280007092.01.T01 MTR_2g020450 70.613 701 102 8 1 603 1 695 0.0 915
MsG0280007092.01.T01 MTR_5g085350 32.732 721 339 18 9 599 23 727 5.20e-99 318
MsG0280007092.01.T01 MTR_5g085350 32.016 734 340 17 9 599 23 740 8.88e-97 312
MsG0280007092.01.T01 MTR_3g051060 30.332 722 361 18 9 599 28 738 5.05e-87 286
MsG0280007092.01.T01 MTR_3g058570 40.717 307 121 4 354 599 82 388 6.30e-60 205
MsG0280007092.01.T01 MTR_5g085340 53.535 198 91 1 402 599 552 748 2.91e-56 203
MsG0280007092.01.T01 MTR_5g085340 27.991 468 258 11 12 403 26 490 2.15e-40 157
MsG0280007092.01.T01 MTR_2g017930 26.332 638 394 10 13 582 8 637 1.76e-52 191
MsG0280007092.01.T01 MTR_5g085360 44.037 218 116 2 382 595 520 735 6.22e-51 187
MsG0280007092.01.T01 MTR_5g085360 28.211 436 260 11 12 403 26 452 2.01e-38 151
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 134 339 2.59e-40 150
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 197 402 8.60e-40 150
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 249 454 2.69e-39 150
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 277 482 3.83e-39 150
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 275 480 4.18e-39 150
MsG0280007092.01.T01 MTR_3g055310 36.408 206 127 2 382 583 302 507 7.35e-39 150
MsG0280007092.01.T01 MTR_3g050500 43.455 191 105 2 406 594 539 728 1.81e-38 151
MsG0280007092.01.T01 MTR_3g050500 24.301 465 256 12 14 403 32 475 1.49e-20 96.7
MsG0280007092.01.T01 MTR_5g028130 38.587 184 112 1 402 585 149 331 1.24e-37 142
MsG0280007092.01.T01 MTR_5g091220 37.569 181 113 0 408 588 420 600 1.01e-35 142
MsG0280007092.01.T01 MTR_5g091220 24.107 224 156 3 5 218 21 240 9.15e-11 65.1
MsG0280007092.01.T01 MTR_2g438740 37.500 184 115 0 402 585 379 562 3.81e-35 140
MsG0280007092.01.T01 MTR_2g438740 28.641 206 137 3 9 214 45 240 3.31e-15 79.3
MsG0280007092.01.T01 MTR_2g438640 30.903 288 153 6 344 598 391 665 2.30e-33 135
MsG0280007092.01.T01 MTR_5g028190 37.640 178 110 1 408 585 351 527 8.14e-33 133
MsG0280007092.01.T01 MTR_5g028190 25.751 233 142 7 28 245 3 219 2.56e-13 73.2
MsG0280007092.01.T01 MTR_5g028450 35.294 204 129 1 381 581 83 286 4.14e-31 123
MsG0280007092.01.T01 MTR_2g438400 36.957 184 115 1 402 585 358 540 1.26e-30 127
MsG0280007092.01.T01 MTR_2g438400 27.368 190 129 2 12 201 20 200 6.76e-12 68.6
MsG0280007092.01.T01 MTR_2g438440 36.667 210 119 5 389 598 491 686 1.33e-30 127
MsG0280007092.01.T01 MTR_2g438640 35.377 212 124 4 389 598 388 588 8.92e-30 124
MsG0280007092.01.T01 MTR_2g438720 36.413 184 116 1 402 585 505 687 1.31e-29 124
MsG0280007092.01.T01 MTR_2g438640 35.678 199 115 4 402 598 504 691 3.57e-29 123
MsG0280007092.01.T01 MTR_2g438700 36.181 199 114 4 402 598 503 690 5.74e-29 122
MsG0280007092.01.T01 MTR_6g017215 30.270 185 128 1 400 584 6 189 1.51e-28 114
MsG0280007092.01.T01 MTR_3g058550 38.265 196 100 6 35 214 2 192 2.16e-27 110
MsG0280007092.01.T01 MTR_2g438760 32.796 186 122 2 402 585 373 557 1.07e-26 115
MsG0280007092.01.T01 MTR_2g438760 31.414 191 116 4 9 196 51 229 3.54e-16 82.4
MsG0280007092.01.T01 MTR_3g452020 31.325 166 114 0 415 580 247 412 2.26e-25 109
MsG0280007092.01.T01 MTR_3g455790 31.325 166 114 0 415 580 422 587 4.03e-25 110
MsG0280007092.01.T01 MTR_3g452020 31.325 166 114 0 415 580 423 588 5.90e-25 109
MsG0280007092.01.T01 MTR_5g028930 34.715 193 119 3 402 590 425 614 5.33e-24 107
MsG0280007092.01.T01 MTR_5g028840 33.333 174 110 2 408 577 10 181 8.22e-24 100
MsG0280007092.01.T01 MTR_5g028110 36.496 137 80 1 445 574 29 165 2.39e-23 97.8
MsG0280007092.01.T01 MTR_5g028690 31.915 188 124 2 402 585 43 230 2.16e-22 97.1
MsG0280007092.01.T01 MTR_5g028900 34.932 146 83 2 402 547 4 137 4.24e-20 87.8
MsG0280007092.01.T01 MTR_3g051020 33.117 154 97 3 14 164 31 181 1.06e-15 76.6
MsG0280007092.01.T01 MTR_2g017800 25.688 218 137 5 13 212 8 218 7.07e-15 75.5
MsG0280007092.01.T01 MTR_2g438580 39.506 81 48 1 415 495 3 82 1.25e-14 69.7
MsG0280007092.01.T01 MTR_1g113760 27.027 185 126 5 13 195 27 204 4.21e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007092.01.T01 AT5G04730 27.406 478 275 11 137 581 142 580 5.99e-36 143
MsG0280007092.01.T01 AT3G18670 35.294 187 119 2 416 601 466 651 4.21e-32 132
MsG0280007092.01.T01 AT3G18670 28.910 211 143 3 9 214 53 261 2.28e-16 83.2
MsG0280007092.01.T01 AT3G18670 35.294 187 119 2 416 601 411 596 4.43e-32 131
MsG0280007092.01.T01 AT3G18670 27.313 227 155 4 9 230 53 274 3.52e-13 72.8
MsG0280007092.01.T01 AT5G04700 38.596 171 104 1 412 581 477 647 4.97e-32 132
MsG0280007092.01.T01 AT3G54065 36.869 198 115 3 402 593 24 217 6.18e-32 124
MsG0280007092.01.T01 AT5G35810 37.037 189 112 3 402 584 139 326 9.41e-31 123
MsG0280007092.01.T01 AT5G04690 34.715 193 122 3 412 602 455 645 6.60e-28 119
MsG0280007092.01.T01 AT5G04690 34.715 193 122 3 412 602 435 625 7.57e-28 119
MsG0280007092.01.T01 AT5G04690 34.715 193 122 3 412 602 469 659 8.09e-28 119
MsG0280007092.01.T01 AT5G04680 35.556 180 105 3 412 581 450 628 4.51e-25 110
MsG0280007092.01.T01 AT5G04680 35.556 180 105 3 412 581 341 519 4.98e-25 109
MsG0280007092.01.T01 AT5G04680 35.556 180 105 3 412 581 464 642 5.22e-25 110
MsG0280007092.01.T01 AT5G04680 35.556 180 105 3 412 581 493 671 7.58e-25 110

Find 110 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTGGCACTTCAAATAAT+TGG 0.180342 2:-10483755 MsG0280007092.01.T01:CDS
AACCATTGCTCGCGAAATTT+TGG 0.216103 2:-10482991 MsG0280007092.01.T01:intron
ATCTTTGCCTCCAATACTTC+AGG 0.230897 2:+10484345 None:intergenic
CAGACATGTTGCAGCATATA+TGG 0.231231 2:+10480575 None:intergenic
GAACAAGAATGTTGTTCTTT+TGG 0.248304 2:-10481727 MsG0280007092.01.T01:CDS
AGTCCTCATGTTGAAGAATT+TGG 0.251360 2:-10481924 MsG0280007092.01.T01:CDS
TTTCTATGAACGTTATAATA+AGG 0.259052 2:-10481033 MsG0280007092.01.T01:CDS
CCTTCATATCTTTGTTGAAT+AGG 0.261530 2:-10483187 MsG0280007092.01.T01:CDS
AACCCTACAAGAAGCTTTCT+TGG 0.265236 2:+10480693 None:intergenic
TTATAACGTTCATAGAAATT+AGG 0.268291 2:+10481038 None:intergenic
TGAGCAAGATTCTGCAGTTT+TGG 0.300345 2:+10480938 None:intergenic
GTGCAGCTTCCAAAACAATT+AGG 0.314136 2:+10483662 None:intergenic
GCTAGGAAGCCTAATTGTTT+TGG 0.323574 2:-10483671 MsG0280007092.01.T01:CDS
TTGTAAAAGAAGGTAGTAAA+TGG 0.341101 2:-10480965 MsG0280007092.01.T01:CDS
TCTGTACTTTGATCTGAGTT+TGG 0.341942 2:-10480520 MsG0280007092.01.T01:CDS
ACCAAAGTATTCACTGGATA+TGG 0.355789 2:+10483960 None:intergenic
AATGAGGATGGGATCTCTTC+TGG 0.357932 2:+10484134 None:intergenic
CATCACTATCCATTGAACTA+TGG 0.365853 2:-10483221 MsG0280007092.01.T01:CDS
TTACCAAGAAAGCTTCTTGT+AGG 0.369536 2:-10480696 MsG0280007092.01.T01:CDS
GATAAACTGCAAATCTCATC+TGG 0.369859 2:+10480598 None:intergenic
GGATGTTCCTGCACATATCT+TGG 0.372166 2:+10484238 None:intergenic
TTCAAACCGAGATGTGAGTA+TGG 0.377547 2:+10480740 None:intergenic
TGTGAAATCATACTTGTATA+AGG 0.382875 2:+10481953 None:intergenic
TTTACAGCGTTCACAAGCTT+TGG 0.387759 2:+10483725 None:intergenic
GAAGAATTTGGTGGTGGTGG+TGG 0.390543 2:-10481912 MsG0280007092.01.T01:CDS
CACATCTATAGCATCTGTTC+TGG 0.402327 2:-10480658 MsG0280007092.01.T01:CDS
GTATGGAAAGAAACAAAATA+AGG 0.413629 2:+10480757 None:intergenic
CTTCATGTTGCAGCAGAGCT+TGG 0.417345 2:-10484183 MsG0280007092.01.T01:CDS
TATCTTAATTGCAGCAAAGA+TGG 0.421596 2:-10481817 MsG0280007092.01.T01:CDS
ATCTTTGCTGCAATTAAGAT+AGG 0.424483 2:+10481819 None:intergenic
TTCATGTTGCAGCAGAGCTT+GGG 0.430517 2:-10484182 MsG0280007092.01.T01:CDS
TAGTCTGAGTTTGTGCTTGA+AGG 0.435141 2:+10483246 None:intergenic
GATTCTTGATCAGGACCGCC+TGG 0.440459 2:+10480864 None:intergenic
TCTTTGCCTCCAATACTTCA+GGG 0.455629 2:+10484346 None:intergenic
TATGAACGTTATAATAAGGA+TGG 0.471736 2:-10481029 MsG0280007092.01.T01:CDS
CGAAATTTCGATAGGAAATG+AGG 0.474414 2:+10484118 None:intergenic
AAAATGAAGTTATTGAGAAG+AGG 0.477595 2:-10481854 MsG0280007092.01.T01:CDS
GTTGAAGAATTTGGTGGTGG+TGG 0.479544 2:-10481915 MsG0280007092.01.T01:CDS
ACCATATCCAGTGAATACTT+TGG 0.482222 2:-10483961 MsG0280007092.01.T01:intron
GGTATGCCGGATTCTTGATC+AGG 0.485024 2:+10480855 None:intergenic
TATGGAAAGAAACAAAATAA+GGG 0.487722 2:+10480758 None:intergenic
TTCTTTCCATACTCACATCT+CGG 0.490447 2:-10480746 MsG0280007092.01.T01:CDS
TTCTCTCCATTGCCCTCTCA+TGG 0.496208 2:+10484392 None:intergenic
CCTATTCAACAAAGATATGA+AGG 0.498588 2:+10483187 None:intergenic
GGCGGTCCTGATCAAGAATC+CGG 0.500801 2:-10480861 MsG0280007092.01.T01:CDS
GTTCTGGTCTCATTCTGTGC+AGG 0.507575 2:-10480642 MsG0280007092.01.T01:CDS
CTAAGAATGCAAAACTCAAA+GGG 0.508121 2:-10484216 MsG0280007092.01.T01:CDS
TCCATTGCCCTCTCATGGCA+TGG 0.508412 2:+10484397 None:intergenic
TACCAAAATTTCGCGAGCAA+TGG 0.510348 2:+10482989 None:intergenic
CAAGTGGTGCGTGTGTATCA+AGG 0.510861 2:+10480985 None:intergenic
TTCATAGAAATTAGGTGGCA+TGG 0.511469 2:+10481046 None:intergenic
AGACATGTTGCAGCATATAT+GGG 0.513588 2:+10480576 None:intergenic
CCTAAGAATGCAAAACTCAA+AGG 0.517719 2:-10484217 MsG0280007092.01.T01:CDS
AGTCATCATCTTTGTTGTGT+TGG 0.519193 2:+10484025 None:intergenic
ATCTTAATTGCAGCAAAGAT+GGG 0.523320 2:-10481816 MsG0280007092.01.T01:CDS
CAAAATAAGGGCTGTGACGG+AGG 0.524058 2:+10480770 None:intergenic
ATTTCGATAGGAAATGAGGA+TGG 0.526430 2:+10484122 None:intergenic
ATGCATGTTCCATAGTTCAA+TGG 0.529696 2:+10483212 None:intergenic
ACATAAGCCAAGATATGTGC+AGG 0.531025 2:-10484245 MsG0280007092.01.T01:CDS
TACCAAGAAAGCTTCTTGTA+GGG 0.531662 2:-10480695 MsG0280007092.01.T01:CDS
TTATACAAGTATGATTTCAC+AGG 0.538164 2:-10481951 MsG0280007092.01.T01:CDS
ACACTAACCAAAGTATTCAC+TGG 0.538217 2:+10483954 None:intergenic
CACCTCTGCATATTCTTGCT+AGG 0.541079 2:-10483688 MsG0280007092.01.T01:CDS
TGAACAGCTGCCAAGAAAAG+AGG 0.541803 2:+10484084 None:intergenic
AGCTCTGCTGCAACATGAAG+AGG 0.542273 2:+10484186 None:intergenic
CACGCACCACTTGTAAAAGA+AGG 0.553960 2:-10480975 MsG0280007092.01.T01:CDS
AGTTATTGAGAAGAGGAGAA+TGG 0.554778 2:-10481847 MsG0280007092.01.T01:CDS
CATGTTGAAGAATTTGGTGG+TGG 0.560650 2:-10481918 MsG0280007092.01.T01:CDS
TCCACATCATGAATAGCCAC+AGG 0.562021 2:+10481756 None:intergenic
TTGGCTTATGTTATCTAACA+AGG 0.563339 2:+10484257 None:intergenic
GATCAAAGTACAGAGGGAGT+TGG 0.566389 2:+10480529 None:intergenic
AATTCTTCAACATGAGGACT+TGG 0.567474 2:+10481927 None:intergenic
TTGTTTAACCATGCCATGAG+AGG 0.567650 2:-10484405 MsG0280007092.01.T01:CDS
AAACAAAATAAGGGCTGTGA+CGG 0.571099 2:+10480767 None:intergenic
GCTCTGCTGCAACATGAAGA+GGG 0.574081 2:+10484187 None:intergenic
TGTTTAACCATGCCATGAGA+GGG 0.575955 2:-10484404 MsG0280007092.01.T01:CDS
ATTTCCTATCGAAATTTCGA+AGG 0.577067 2:-10484114 MsG0280007092.01.T01:CDS
GAGTTTGGCTATGTGTCGGA+AGG 0.578667 2:-10480505 MsG0280007092.01.T01:CDS
ATGAACGTTATAATAAGGAT+GGG 0.580533 2:-10481028 MsG0280007092.01.T01:CDS
ACCGCCTGGGATAGCTGTTG+AGG 0.581995 2:+10480878 None:intergenic
TTCGCCTTCGAAATTTCGAT+AGG 0.591191 2:+10484110 None:intergenic
TTCAATTGTTGATGAGAACA+AGG 0.592418 2:-10483282 MsG0280007092.01.T01:CDS
ATCTGAGTTTGGCTATGTGT+CGG 0.593043 2:-10480509 MsG0280007092.01.T01:CDS
TTTCGATAGGAAATGAGGAT+GGG 0.593948 2:+10484123 None:intergenic
ATTCTTGATCAGGACCGCCT+GGG 0.594512 2:+10480865 None:intergenic
AACTCAGATCAAAGTACAGA+GGG 0.594945 2:+10480523 None:intergenic
TAACGTTCATAGAAATTAGG+TGG 0.595282 2:+10481041 None:intergenic
CCCTGTGGCTATTCATGATG+TGG 0.598098 2:-10481757 MsG0280007092.01.T01:CDS
ATAAACTGCAAATCTCATCT+GGG 0.613516 2:+10480599 None:intergenic
CCTCATGTTGAAGAATTTGG+TGG 0.614175 2:-10481921 MsG0280007092.01.T01:CDS
ACAGCATAGAGTTTGAAAGC+AGG 0.620300 2:+10480816 None:intergenic
AGAGAAAATCCAAAGGAGGA+AGG 0.622162 2:-10482027 MsG0280007092.01.T01:CDS
GCAGAGGTGATAATCCATCA+TGG 0.623629 2:+10483702 None:intergenic
CATTGACATAGGAGCAACAT+GGG 0.626539 2:-10482051 MsG0280007092.01.T01:intron
ACAACCTCAACAGCTATCCC+AGG 0.633602 2:-10480882 MsG0280007092.01.T01:CDS
CCACCAAATTCTTCAACATG+AGG 0.652444 2:+10481921 None:intergenic
GGGTAGAGAAAATCCAAAGG+AGG 0.656067 2:-10482031 MsG0280007092.01.T01:CDS
CTCTGCTGCAACATGAAGAG+GGG 0.656516 2:+10484188 None:intergenic
ACCATGCCATGAGAGGGCAA+TGG 0.670926 2:-10484398 MsG0280007092.01.T01:CDS
AACACTTTGTAGCTGCGCTG+AGG 0.674861 2:+10480480 None:intergenic
AAACTCAGATCAAAGTACAG+AGG 0.675417 2:+10480522 None:intergenic
GCATTGACATAGGAGCAACA+TGG 0.681991 2:-10482052 MsG0280007092.01.T01:intron
GTGAACGCTGTAAACCATGA+TGG 0.682423 2:-10483716 MsG0280007092.01.T01:CDS
AACTGCAGAATCTTGCTCAG+TGG 0.683105 2:-10480934 MsG0280007092.01.T01:CDS
GTACAGAGGGAGTTGGACCA+AGG 0.683296 2:+10480536 None:intergenic
TTCCTAGCAAGAATATGCAG+AGG 0.691547 2:+10483686 None:intergenic
CATGGGTAGAGAAAATCCAA+AGG 0.708498 2:-10482034 MsG0280007092.01.T01:CDS
CCACATCATGAATAGCCACA+GGG 0.710076 2:+10481757 None:intergenic
GATTCTAGATATGTACCCTG+TGG 0.719569 2:-10481772 MsG0280007092.01.T01:CDS
ACCTCAACAGCTATCCCAGG+CGG 0.731295 2:-10480879 MsG0280007092.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGATTAAATTATGTAT+GGG - Chr2:10483773-10483792 MsG0280007092.01.T01:intron 10.0%
!!! TCTTTTATTTAATTTTTACT+CGG - Chr2:10481763-10481782 MsG0280007092.01.T01:CDS 10.0%
!!! TTTATTTTTCATTTAGTATA+TGG - Chr2:10482327-10482346 MsG0280007092.01.T01:intron 10.0%
!! AAATTACAGATAAATATGAT+TGG - Chr2:10482160-10482179 MsG0280007092.01.T01:intron 15.0%
!! AATAATCATATAAACAATGT+AGG + Chr2:10481357-10481376 None:intergenic 15.0%
!! AATGTAATGAATTTATATGT+AGG - Chr2:10481123-10481142 MsG0280007092.01.T01:intron 15.0%
!! ATTATAAAATAAAATCAGGT+TGG + Chr2:10481389-10481408 None:intergenic 15.0%
!! CATACATAATTTAATCAATT+AGG + Chr2:10483774-10483793 None:intergenic 15.0%
!! CTAATTGATTAAATTATGTA+TGG - Chr2:10483772-10483791 MsG0280007092.01.T01:intron 15.0%
!! TCACATTATAAAATAAAATC+AGG + Chr2:10481393-10481412 None:intergenic 15.0%
!! TGAATTTACAATATTTGAAA+TGG + Chr2:10482075-10482094 None:intergenic 15.0%
!! TGTAAAAAAATTTATATCGA+CGG - Chr2:10481520-10481539 MsG0280007092.01.T01:intron 15.0%
!!! AATTTTTTTGTTTAACTGAA+TGG - Chr2:10482825-10482844 MsG0280007092.01.T01:intron 15.0%
!!! GCAAATTATTTTATGAAATA+TGG - Chr2:10481051-10481070 MsG0280007092.01.T01:CDS 15.0%
!!! TATATTTTTTCTTTTCAACA+AGG - Chr2:10481327-10481346 MsG0280007092.01.T01:intron 15.0%
!!! TGAAGAAATATTAAGTTTTA+GGG + Chr2:10482686-10482705 None:intergenic 15.0%
!!! TGATTTTATTTTATAATGTG+AGG - Chr2:10481392-10481411 MsG0280007092.01.T01:intron 15.0%
!!! TTTTAGATATGCTTTTATTA+TGG + Chr2:10481466-10481485 None:intergenic 15.0%
!! AATGAATTTATATGTAGGTT+TGG - Chr2:10481128-10481147 MsG0280007092.01.T01:intron 20.0%
!! AATTCAAAATTAATCTCTTC+CGG - Chr2:10481552-10481571 MsG0280007092.01.T01:intron 20.0%
!! CAGTTAAACAAAAAAATTAC+AGG + Chr2:10482823-10482842 None:intergenic 20.0%
!! TAAAAGATGAAATTCAATTG+CGG + Chr2:10482275-10482294 None:intergenic 20.0%
!! TATAGAATATAGACCATATA+AGG + Chr2:10482722-10482741 None:intergenic 20.0%
!! TATGGAAAGAAACAAAATAA+GGG + Chr2:10484144-10484163 None:intergenic 20.0%
!! TTATAACGTTCATAGAAATT+AGG + Chr2:10483864-10483883 None:intergenic 20.0%
!! TTTCTATGAACGTTATAATA+AGG - Chr2:10483866-10483885 MsG0280007092.01.T01:intron 20.0%
!!! ATTTTTGTTGATCATGTTAT+TGG - Chr2:10483443-10483462 MsG0280007092.01.T01:intron 20.0%
!!! GAAGAAATATTAAGTTTTAG+GGG + Chr2:10482685-10482704 None:intergenic 20.0%
!!! GTGAAGAAATATTAAGTTTT+AGG + Chr2:10482687-10482706 None:intergenic 20.0%
! AAAATGAAGTTATTGAGAAG+AGG - Chr2:10483045-10483064 MsG0280007092.01.T01:intron 25.0%
! AAGATTTCTAATCTATTAGG+AGG + Chr2:10483408-10483427 None:intergenic 25.0%
! AATCCATCCATATAAGAATT+AGG - Chr2:10482792-10482811 MsG0280007092.01.T01:intron 25.0%
! ACAGATCAGTAAAAATACAA+AGG - Chr2:10482294-10482313 MsG0280007092.01.T01:intron 25.0%
! AGAAAAATAGTAGACAAGTT+AGG + Chr2:10481832-10481851 None:intergenic 25.0%
! AGACCTCAAAAACATTAATA+TGG - Chr2:10482223-10482242 MsG0280007092.01.T01:intron 25.0%
! ATGAACGTTATAATAAGGAT+GGG - Chr2:10483871-10483890 MsG0280007092.01.T01:intron 25.0%
! ATTAACAAACTAGTAACATG+AGG + Chr2:10483215-10483234 None:intergenic 25.0%
! CAAAAACTGTTATATTTGCA+AGG + Chr2:10482621-10482640 None:intergenic 25.0%
! GTATGGAAAGAAACAAAATA+AGG + Chr2:10484145-10484164 None:intergenic 25.0%
! GTGAAGATTTCTAATCTATT+AGG + Chr2:10483411-10483430 None:intergenic 25.0%
! TAGTTACTCATAAAGTAAAG+TGG - Chr2:10483696-10483715 MsG0280007092.01.T01:CDS 25.0%
! TATGAACGTTATAATAAGGA+TGG - Chr2:10483870-10483889 MsG0280007092.01.T01:intron 25.0%
! TCACTTTCAATCAAAAACAA+TGG - Chr2:10480896-10480915 MsG0280007092.01.T01:CDS 25.0%
! TGATACTGATAAGTGATAAA+TGG - Chr2:10481575-10481594 MsG0280007092.01.T01:intron 25.0%
! TGGTTAATTAAATTGCTGAT+TGG - Chr2:10483658-10483677 MsG0280007092.01.T01:CDS 25.0%
! TGTGAAATCATACTTGTATA+AGG + Chr2:10482949-10482968 None:intergenic 25.0%
! TTATACAAGTATGATTTCAC+AGG - Chr2:10482948-10482967 MsG0280007092.01.T01:intron 25.0%
! TTGTAAAAGAAGGTAGTAAA+TGG - Chr2:10483934-10483953 MsG0280007092.01.T01:intron 25.0%
! TTTCCTAATTCTTATATGGA+TGG + Chr2:10482798-10482817 None:intergenic 25.0%
!! ATATACTGGCTATAACTATA+AGG + Chr2:10481803-10481822 None:intergenic 25.0%
!! ATGATTTTTAATCGTAGTTG+TGG - Chr2:10482122-10482141 MsG0280007092.01.T01:intron 25.0%
!! CTTGCAAATATAACAGTTTT+TGG - Chr2:10482619-10482638 MsG0280007092.01.T01:intron 25.0%
!! TCGTGTAATTTTTATGTGAT+CGG + Chr2:10480981-10481000 None:intergenic 25.0%
!!! ACACCATATTAATGTTTTTG+AGG + Chr2:10482229-10482248 None:intergenic 25.0%
!!! CTTTAGAATTAGTCCTTATA+TGG - Chr2:10482706-10482725 MsG0280007092.01.T01:intron 25.0%
!!! GTTACTAGTTTGTTAATAAG+AGG - Chr2:10483218-10483237 MsG0280007092.01.T01:CDS 25.0%
!!! TTGTATTTTTCAGCTTGTTA+AGG - Chr2:10483827-10483846 MsG0280007092.01.T01:intron 25.0%
!!! TTTTTTTGTCTTGCATAAAG+TGG - Chr2:10483621-10483640 MsG0280007092.01.T01:intron 25.0%
AAGTTAGGCTTGTAATATAC+TGG + Chr2:10481817-10481836 None:intergenic 30.0%
AATGTATCAATTCGCAAAGT+TGG + Chr2:10483482-10483501 None:intergenic 30.0%
ATAAACTGCAAATCTCATCT+GGG + Chr2:10484303-10484322 None:intergenic 30.0%
ATCTTAATTGCAGCAAAGAT+GGG - Chr2:10483083-10483102 MsG0280007092.01.T01:intron 30.0%
ATCTTTGCTGCAATTAAGAT+AGG + Chr2:10483083-10483102 None:intergenic 30.0%
ATTTCCTATCGAAATTTCGA+AGG - Chr2:10480785-10480804 MsG0280007092.01.T01:CDS 30.0%
CCTATTCAACAAAGATATGA+AGG + Chr2:10481715-10481734 None:intergenic 30.0%
CCTTCATATCTTTGTTGAAT+AGG - Chr2:10481712-10481731 MsG0280007092.01.T01:CDS 30.0%
CTAAGAATGCAAAACTCAAA+GGG - Chr2:10480683-10480702 MsG0280007092.01.T01:CDS 30.0%
GGAAAGAAAAGAAAAATCAC+TGG - Chr2:10482453-10482472 MsG0280007092.01.T01:intron 30.0%
GGCATTTCCTAATTCTTATA+TGG + Chr2:10482802-10482821 None:intergenic 30.0%
GGTCTATATTCTATAGACTA+AGG - Chr2:10482727-10482746 MsG0280007092.01.T01:intron 30.0%
TAACGTTCATAGAAATTAGG+TGG + Chr2:10483861-10483880 None:intergenic 30.0%
TATCTTAATTGCAGCAAAGA+TGG - Chr2:10483082-10483101 MsG0280007092.01.T01:intron 30.0%
TCAAACTTTATTATGCCTCA+AGG + Chr2:10482652-10482671 None:intergenic 30.0%
TCTAATCATGATCGCAATTA+CGG + Chr2:10482191-10482210 None:intergenic 30.0%
TTATCACTTATCAGTATCAC+CGG + Chr2:10481574-10481593 None:intergenic 30.0%
TTCTGTTATATTACAGCAAC+AGG - Chr2:10481848-10481867 MsG0280007092.01.T01:CDS 30.0%
TTGGCTTATGTTATCTAACA+AGG + Chr2:10480645-10480664 None:intergenic 30.0%
! AAGGTCTTCCTAATCATTTT+CGG - Chr2:10482524-10482543 MsG0280007092.01.T01:intron 30.0%
! AAGTGGATTTCATTGTAATC+TGG - Chr2:10483638-10483657 MsG0280007092.01.T01:CDS 30.0%
! ACAAAACGAGACATTGATTA+AGG - Chr2:10483510-10483529 MsG0280007092.01.T01:intron 30.0%
! GAACAAGAATGTTGTTCTTT+TGG - Chr2:10483172-10483191 MsG0280007092.01.T01:CDS 30.0%
! TACTAGTAGTTTTCATTTCG+TGG - Chr2:10482099-10482118 MsG0280007092.01.T01:intron 30.0%
! TTACTACCTTCTTTTACAAG+TGG + Chr2:10483933-10483952 None:intergenic 30.0%
! TTCAATTGTTGATGAGAACA+AGG - Chr2:10481617-10481636 MsG0280007092.01.T01:intron 30.0%
! TTCTTTTGGCCATAGAAAAT+AGG - Chr2:10483186-10483205 MsG0280007092.01.T01:CDS 30.0%
!! TTTTTGAGGGAAAAGTAAAG+TGG - Chr2:10483736-10483755 MsG0280007092.01.T01:CDS 30.0%
!!! TTTTCGTCAAGTTGATATCA+AGG - Chr2:10483262-10483281 MsG0280007092.01.T01:CDS 30.0%
AAACAAAATAAGGGCTGTGA+CGG + Chr2:10484135-10484154 None:intergenic 35.0%
AAACTCAGATCAAAGTACAG+AGG + Chr2:10484380-10484399 None:intergenic 35.0%
AACTCAGATCAAAGTACAGA+GGG + Chr2:10484379-10484398 None:intergenic 35.0%
AAGAAACAACCAAGTAACGT+GGG - Chr2:10481439-10481458 MsG0280007092.01.T01:intron 35.0%
AAGGACGACAAAGATATTGA+AGG + Chr2:10482602-10482621 None:intergenic 35.0%
AATTCTTCAACATGAGGACT+TGG + Chr2:10482975-10482994 None:intergenic 35.0%
ACAATGAGAAGACTAATGCA+TGG + Chr2:10482567-10482586 None:intergenic 35.0%
ACCATATCCAGTGAATACTT+TGG - Chr2:10480938-10480957 MsG0280007092.01.T01:CDS 35.0%
ACTTCTAATCCTTGCAATGA+AGG - Chr2:10482505-10482524 MsG0280007092.01.T01:intron 35.0%
AGACATGTTGCAGCATATAT+GGG + Chr2:10484326-10484345 None:intergenic 35.0%
AGGTTGTCACAAAAACTGTT+TGG + Chr2:10480625-10480644 None:intergenic 35.0%
AGTCCTCATGTTGAAGAATT+TGG - Chr2:10482975-10482994 MsG0280007092.01.T01:intron 35.0%
AGTTATTGAGAAGAGGAGAA+TGG - Chr2:10483052-10483071 MsG0280007092.01.T01:intron 35.0%
ATCATTGCTGTACTTATAGG+AGG - Chr2:10483300-10483319 MsG0280007092.01.T01:intron 35.0%
ATGCATGTTCCATAGTTCAA+TGG + Chr2:10481690-10481709 None:intergenic 35.0%
ATTAGATTATTTGGTCCGAG+TGG + Chr2:10483552-10483571 None:intergenic 35.0%
ATTTCGATAGGAAATGAGGA+TGG + Chr2:10480780-10480799 None:intergenic 35.0%
CATCACTATCCATTGAACTA+TGG - Chr2:10481678-10481697 MsG0280007092.01.T01:intron 35.0%
CCTAAGAATGCAAAACTCAA+AGG - Chr2:10480682-10480701 MsG0280007092.01.T01:CDS 35.0%
CGAAATTTCGATAGGAAATG+AGG + Chr2:10480784-10480803 None:intergenic 35.0%
GATAAACTGCAAATCTCATC+TGG + Chr2:10484304-10484323 None:intergenic 35.0%
GGTTTGGCACTTCAAATAAT+TGG - Chr2:10481144-10481163 MsG0280007092.01.T01:intron 35.0%
TACCAAGAAAGCTTCTTGTA+GGG - Chr2:10484204-10484223 MsG0280007092.01.T01:CDS 35.0%
TCATTGCAAGGATTAGAAGT+CGG + Chr2:10482505-10482524 None:intergenic 35.0%
TCATTGCTGTACTTATAGGA+GGG - Chr2:10483301-10483320 MsG0280007092.01.T01:intron 35.0%
TCTATGTAAACGTACAGTAG+AGG + Chr2:10482252-10482271 None:intergenic 35.0%
TCTGTACTTTGATCTGAGTT+TGG - Chr2:10484379-10484398 MsG0280007092.01.T01:CDS 35.0%
TGAGAAAAACCCTGAAGTAT+TGG - Chr2:10480544-10480563 MsG0280007092.01.T01:CDS 35.0%
TGCATCATTGCTGTACTTAT+AGG - Chr2:10483297-10483316 MsG0280007092.01.T01:intron 35.0%
TGTAAGTAGCATCACTTACA+AGG - Chr2:10481294-10481313 MsG0280007092.01.T01:intron 35.0%
TTACCAAGAAAGCTTCTTGT+AGG - Chr2:10484203-10484222 MsG0280007092.01.T01:CDS 35.0%
TTCATAGAAATTAGGTGGCA+TGG + Chr2:10483856-10483875 None:intergenic 35.0%
TTCTTTCCATACTCACATCT+CGG - Chr2:10484153-10484172 MsG0280007092.01.T01:CDS 35.0%
TTTCGATAGGAAATGAGGAT+GGG + Chr2:10480779-10480798 None:intergenic 35.0%
! ACACTAACCAAAGTATTCAC+TGG + Chr2:10480948-10480967 None:intergenic 35.0%
! ACCAAAGTATTCACTGGATA+TGG + Chr2:10480942-10480961 None:intergenic 35.0%
! AGTCATCATCTTTGTTGTGT+TGG + Chr2:10480877-10480896 None:intergenic 35.0%
! ATCAATGTCTCGTTTTGTGA+TGG + Chr2:10483508-10483527 None:intergenic 35.0%
! ATGAGGTTGCCTATTTTCTA+TGG + Chr2:10483198-10483217 None:intergenic 35.0%
! CGAGACATTGATTAAGGAAT+TGG - Chr2:10483516-10483535 MsG0280007092.01.T01:intron 35.0%
! GATGCTTTCTTTTGTCTTCA+TGG - Chr2:10480848-10480867 MsG0280007092.01.T01:CDS 35.0%
!! CCTTTGAGTTTTGCATTCTT+AGG + Chr2:10480685-10480704 None:intergenic 35.0%
!! GCATTAGTCTTCTCATTGTT+AGG - Chr2:10482568-10482587 MsG0280007092.01.T01:intron 35.0%
!! TAACTGAATGGCATTGACAT+AGG - Chr2:10482837-10482856 MsG0280007092.01.T01:intron 35.0%
!! TTCCTAATCATTTTCGGTGT+CGG - Chr2:10482530-10482549 MsG0280007092.01.T01:intron 35.0%
!!! GTTTTTGGTTTTAGTCCTTG+AGG - Chr2:10482634-10482653 MsG0280007092.01.T01:intron 35.0%
AAATGCAGTGGGAATACAAG+TGG - Chr2:10483359-10483378 MsG0280007092.01.T01:intron 40.0%
AACCCTACAAGAAGCTTTCT+TGG + Chr2:10484209-10484228 None:intergenic 40.0%
AAGGATTAGAAGTCGGATCA+TGG + Chr2:10482498-10482517 None:intergenic 40.0%
ACAGCATAGAGTTTGAAAGC+AGG + Chr2:10484086-10484105 None:intergenic 40.0%
ACATAAGCCAAGATATGTGC+AGG - Chr2:10480654-10480673 MsG0280007092.01.T01:CDS 40.0%
AGAGAAAATCCAAAGGAGGA+AGG - Chr2:10482872-10482891 MsG0280007092.01.T01:intron 40.0%
ATCTGAGTTTGGCTATGTGT+CGG - Chr2:10484390-10484409 MsG0280007092.01.T01:CDS 40.0%
ATCTTTGCCTCCAATACTTC+AGG + Chr2:10480557-10480576 None:intergenic 40.0%
ATGGTGTTTGTGTCAATGTC+AGG - Chr2:10481594-10481613 MsG0280007092.01.T01:intron 40.0%
ATTGGAGTCAAGTTTCCACT+CGG - Chr2:10483534-10483553 MsG0280007092.01.T01:intron 40.0%
CAAGAAACAACCAAGTAACG+TGG - Chr2:10481438-10481457 MsG0280007092.01.T01:intron 40.0%
CACATCTATAGCATCTGTTC+TGG - Chr2:10484241-10484260 MsG0280007092.01.T01:CDS 40.0%
CAGACATGTTGCAGCATATA+TGG + Chr2:10484327-10484346 None:intergenic 40.0%
CATGGGTAGAGAAAATCCAA+AGG - Chr2:10482865-10482884 MsG0280007092.01.T01:intron 40.0%
CATTGACATAGGAGCAACAT+GGG - Chr2:10482848-10482867 MsG0280007092.01.T01:intron 40.0%
CCACCAAATTCTTCAACATG+AGG + Chr2:10482981-10483000 None:intergenic 40.0%
CCTCATGTTGAAGAATTTGG+TGG - Chr2:10482978-10482997 MsG0280007092.01.T01:intron 40.0%
CTAGCAACATGGTTTACAAG+AGG + Chr2:10481945-10481964 None:intergenic 40.0%
GAGGAAGGAAAAACACATTC+GGG - Chr2:10482887-10482906 MsG0280007092.01.T01:intron 40.0%
GATTCTAGATATGTACCCTG+TGG - Chr2:10483127-10483146 MsG0280007092.01.T01:intron 40.0%
GGAGGAAGGAAAAACACATT+CGG - Chr2:10482886-10482905 MsG0280007092.01.T01:intron 40.0%
GTGCAGCTTCCAAAACAATT+AGG + Chr2:10481240-10481259 None:intergenic 40.0%
TACCAAAATTTCGCGAGCAA+TGG + Chr2:10481913-10481932 None:intergenic 40.0%
TACCGACACCGAAAATGATT+AGG + Chr2:10482535-10482554 None:intergenic 40.0%
TAGTCTGAGTTTGTGCTTGA+AGG + Chr2:10481656-10481675 None:intergenic 40.0%
TATTATGGACCCACGTTACT+TGG + Chr2:10481451-10481470 None:intergenic 40.0%
TCTTTGCCTCCAATACTTCA+GGG + Chr2:10480556-10480575 None:intergenic 40.0%
TGGGAATACAAGTGGTACAA+GGG - Chr2:10483367-10483386 MsG0280007092.01.T01:intron 40.0%
TGTTTAACCATGCCATGAGA+GGG - Chr2:10480495-10480514 MsG0280007092.01.T01:CDS 40.0%
TTAGGAAGACCTTCATTGCA+AGG + Chr2:10482517-10482536 None:intergenic 40.0%
TTCAAACCGAGATGTGAGTA+TGG + Chr2:10484162-10484181 None:intergenic 40.0%
TTCCTAGCAAGAATATGCAG+AGG + Chr2:10481216-10481235 None:intergenic 40.0%
TTCGCCTTCGAAATTTCGAT+AGG + Chr2:10480792-10480811 None:intergenic 40.0%
TTGTTTAACCATGCCATGAG+AGG - Chr2:10480494-10480513 MsG0280007092.01.T01:CDS 40.0%
TTTACAGCGTTCACAAGCTT+TGG + Chr2:10481177-10481196 None:intergenic 40.0%
! AACCATTGCTCGCGAAATTT+TGG - Chr2:10481908-10481927 MsG0280007092.01.T01:CDS 40.0%
! CATGTTGAAGAATTTGGTGG+TGG - Chr2:10482981-10483000 MsG0280007092.01.T01:intron 40.0%
! GCTAGGAAGCCTAATTGTTT+TGG - Chr2:10481228-10481247 MsG0280007092.01.T01:intron 40.0%
! TGAGCAAGATTCTGCAGTTT+TGG + Chr2:10483964-10483983 None:intergenic 40.0%
! TGTGTTTTTCCTTCCTCCTT+TGG + Chr2:10482884-10482903 None:intergenic 40.0%
! TTTTAGCAGTAGTGGTATGC+CGG + Chr2:10484060-10484079 None:intergenic 40.0%
!! GAAAAACCCTGAAGTATTGG+AGG - Chr2:10480547-10480566 MsG0280007092.01.T01:CDS 40.0%
!!! ATTGTTTTGGAAGCTGCACA+AGG - Chr2:10481241-10481260 MsG0280007092.01.T01:intron 40.0%
AACTGCAGAATCTTGCTCAG+TGG - Chr2:10483965-10483984 MsG0280007092.01.T01:CDS 45.0%
AATGAGGATGGGATCTCTTC+TGG + Chr2:10480768-10480787 None:intergenic 45.0%
ACCAAGGCAAAAAAGGACAC+AGG + Chr2:10484350-10484369 None:intergenic 45.0%
ATCATGGATTCCCAATTGGG+TGG + Chr2:10482482-10482501 None:intergenic 45.0%
CACCTCTGCATATTCTTGCT+AGG - Chr2:10481211-10481230 MsG0280007092.01.T01:intron 45.0%
CACGCACCACTTGTAAAAGA+AGG - Chr2:10483924-10483943 MsG0280007092.01.T01:intron 45.0%
CCACATCATGAATAGCCACA+GGG + Chr2:10483145-10483164 None:intergenic 45.0%
CGGATCATGGATTCCCAATT+GGG + Chr2:10482485-10482504 None:intergenic 45.0%
GAGTTGGACCAAGGCAAAAA+AGG + Chr2:10484357-10484376 None:intergenic 45.0%
GATCAAAGTACAGAGGGAGT+TGG + Chr2:10484373-10484392 None:intergenic 45.0%
GCAGAGGTGATAATCCATCA+TGG + Chr2:10481200-10481219 None:intergenic 45.0%
GGATGTTCCTGCACATATCT+TGG + Chr2:10480664-10480683 None:intergenic 45.0%
GGGTAGAGAAAATCCAAAGG+AGG - Chr2:10482868-10482887 MsG0280007092.01.T01:intron 45.0%
GTGAACGCTGTAAACCATGA+TGG - Chr2:10481183-10481202 MsG0280007092.01.T01:intron 45.0%
GTGGGAATACAAGTGGTACA+AGG - Chr2:10483366-10483385 MsG0280007092.01.T01:intron 45.0%
TCATGGATTCCCAATTGGGT+GGG + Chr2:10482481-10482500 None:intergenic 45.0%
TCCACATCATGAATAGCCAC+AGG + Chr2:10483146-10483165 None:intergenic 45.0%
TCGGATCATGGATTCCCAAT+TGG + Chr2:10482486-10482505 None:intergenic 45.0%
TGAACAGCTGCCAAGAAAAG+AGG + Chr2:10480818-10480837 None:intergenic 45.0%
TTATAGGAGGGTTTAAGCCG+TGG - Chr2:10483313-10483332 MsG0280007092.01.T01:intron 45.0%
TTCATGTTGCAGCAGAGCTT+GGG - Chr2:10480717-10480736 MsG0280007092.01.T01:CDS 45.0%
! AGAAGGTAGGACTAGCAACA+TGG + Chr2:10481956-10481975 None:intergenic 45.0%
! AGGCGAAACTCCTCTTTTCT+TGG - Chr2:10480805-10480824 MsG0280007092.01.T01:CDS 45.0%
! CTTTTCTTGGCAGCTGTTCA+TGG - Chr2:10480818-10480837 MsG0280007092.01.T01:CDS 45.0%
! GCATTGACATAGGAGCAACA+TGG - Chr2:10482847-10482866 MsG0280007092.01.T01:intron 45.0%
!! GTTGAAGAATTTGGTGGTGG+TGG - Chr2:10482984-10483003 MsG0280007092.01.T01:intron 45.0%
!! TTTTGGAAGCTGCACAAGGA+TGG - Chr2:10481245-10481264 MsG0280007092.01.T01:intron 45.0%
!!! GCAGGCTTTTTTAGCAGTAG+TGG + Chr2:10484068-10484087 None:intergenic 45.0%
!! ATATAATATATTAGATTATT+TGG + Chr2:10483561-10483580 None:intergenic 5.0%
!!! TATTTTTTTATTTTTTTTGA+GGG - Chr2:10483723-10483742 MsG0280007092.01.T01:CDS 5.0%
!!! TTATTTTTTTATTTTTTTTG+AGG - Chr2:10483722-10483741 MsG0280007092.01.T01:CDS 5.0%
AACACTTTGTAGCTGCGCTG+AGG + Chr2:10484422-10484441 None:intergenic 50.0%
ACAACCTCAACAGCTATCCC+AGG - Chr2:10484017-10484036 MsG0280007092.01.T01:CDS 50.0%
AGCTCTGCTGCAACATGAAG+AGG + Chr2:10480716-10480735 None:intergenic 50.0%
AGTCCTACCTTCTAACCCAC+CGG - Chr2:10481963-10481982 MsG0280007092.01.T01:CDS 50.0%
ATGTAGAGCAAGCGCAAGCA+AGG - Chr2:10482432-10482451 MsG0280007092.01.T01:intron 50.0%
ATTCTTGATCAGGACCGCCT+GGG + Chr2:10484037-10484056 None:intergenic 50.0%
CAAAATAAGGGCTGTGACGG+AGG + Chr2:10484132-10484151 None:intergenic 50.0%
CAAGTGGTGCGTGTGTATCA+AGG + Chr2:10483917-10483936 None:intergenic 50.0%
CCCTGTGGCTATTCATGATG+TGG - Chr2:10483142-10483161 MsG0280007092.01.T01:intron 50.0%
CTCTGCTGCAACATGAAGAG+GGG + Chr2:10480714-10480733 None:intergenic 50.0%
CTTCATGTTGCAGCAGAGCT+TGG - Chr2:10480716-10480735 MsG0280007092.01.T01:CDS 50.0%
GAGTTTGGCTATGTGTCGGA+AGG - Chr2:10484394-10484413 MsG0280007092.01.T01:CDS 50.0%
GCTCTGCTGCAACATGAAGA+GGG + Chr2:10480715-10480734 None:intergenic 50.0%
GGTATGCCGGATTCTTGATC+AGG + Chr2:10484047-10484066 None:intergenic 50.0%
GTTCTGGTCTCATTCTGTGC+AGG - Chr2:10484257-10484276 MsG0280007092.01.T01:CDS 50.0%
TGCTGCGATGCAAATGCAGT+GGG - Chr2:10483348-10483367 MsG0280007092.01.T01:intron 50.0%
TTCTCTCCATTGCCCTCTCA+TGG + Chr2:10480510-10480529 None:intergenic 50.0%
!! ATCACTGGTTCCCACCCAAT+TGG - Chr2:10482468-10482487 MsG0280007092.01.T01:intron 50.0%
!! GAAGAATTTGGTGGTGGTGG+TGG - Chr2:10482987-10483006 MsG0280007092.01.T01:intron 50.0%
!! TCACTGGTTCCCACCCAATT+GGG - Chr2:10482469-10482488 MsG0280007092.01.T01:intron 50.0%
!!! GCCTGTGTCCTTTTTTGCCT+TGG - Chr2:10484346-10484365 MsG0280007092.01.T01:CDS 50.0%
ACCATGCCATGAGAGGGCAA+TGG - Chr2:10480501-10480520 MsG0280007092.01.T01:CDS 55.0%
ACCTCAACAGCTATCCCAGG+CGG - Chr2:10484020-10484039 MsG0280007092.01.T01:CDS 55.0%
CCAACTACTTGCGCTAGACC+CGG + Chr2:10481985-10482004 None:intergenic 55.0%
GATTCTTGATCAGGACCGCC+TGG + Chr2:10484038-10484057 None:intergenic 55.0%
GGCGGTCCTGATCAAGAATC+CGG - Chr2:10484038-10484057 MsG0280007092.01.T01:CDS 55.0%
GTACAGAGGGAGTTGGACCA+AGG + Chr2:10484366-10484385 None:intergenic 55.0%
GTCCTACCTTCTAACCCACC+GGG - Chr2:10481964-10481983 MsG0280007092.01.T01:CDS 55.0%
GTGCTGCGATGCAAATGCAG+TGG - Chr2:10483347-10483366 MsG0280007092.01.T01:intron 55.0%
TCCATTGCCCTCTCATGGCA+TGG + Chr2:10480505-10480524 None:intergenic 55.0%
TGCATTTGCATCGCAGCACC+AGG + Chr2:10483346-10483365 None:intergenic 55.0%
!! GAATTTGGTGGTGGTGGTGG+TGG - Chr2:10482990-10483009 MsG0280007092.01.T01:intron 55.0%
ACCGCCTGGGATAGCTGTTG+AGG + Chr2:10484024-10484043 None:intergenic 60.0%
ACTACTTGCGCTAGACCCGG+TGG + Chr2:10481982-10482001 None:intergenic 60.0%
AGGGTTTAAGCCGTGGCGTG+GGG - Chr2:10483320-10483339 MsG0280007092.01.T01:intron 60.0%
CCGGGTCTAGCGCAAGTAGT+TGG - Chr2:10481982-10482001 MsG0280007092.01.T01:CDS 60.0%
CTACTTGCGCTAGACCCGGT+GGG + Chr2:10481981-10482000 None:intergenic 60.0%
GAGGGTTTAAGCCGTGGCGT+GGG - Chr2:10483319-10483338 MsG0280007092.01.T01:intron 60.0%
!! GACCCGGTGGGTTAGAAGGT+AGG + Chr2:10481969-10481988 None:intergenic 60.0%
!! GCTAGACCCGGTGGGTTAGA+AGG + Chr2:10481973-10481992 None:intergenic 60.0%
!! TTTGGTGGTGGTGGTGGTGG+TGG - Chr2:10482993-10483012 MsG0280007092.01.T01:CDS 60.0%
GGAGGGTTTAAGCCGTGGCG+TGG - Chr2:10483318-10483337 MsG0280007092.01.T01:intron 65.0%
!! GGTGGTGGTGGTGGTGGCAT+AGG - Chr2:10483002-10483021 MsG0280007092.01.T01:CDS 65.0%
TTAAGCCGTGGCGTGGGGCC+TGG - Chr2:10483325-10483344 MsG0280007092.01.T01:intron 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - Chr2:10482996-10483015 MsG0280007092.01.T01:CDS 70.0%
CAGCACCAGGCCCCACGCCA+CGG + Chr2:10483333-10483352 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 10480470 10484451 10480470 ID=MsG0280007092.01;Name=MsG0280007092.01
Chr2 mRNA 10480470 10484451 10480470 ID=MsG0280007092.01.T01;Parent=MsG0280007092.01;Name=MsG0280007092.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|6|0|603
Chr2 exon 10483962 10484451 10483962 ID=MsG0280007092.01.T01:exon:3390;Parent=MsG0280007092.01.T01
Chr2 exon 10483627 10483776 10483627 ID=MsG0280007092.01.T01:exon:3389;Parent=MsG0280007092.01.T01
Chr2 exon 10483171 10483305 10483171 ID=MsG0280007092.01.T01:exon:3388;Parent=MsG0280007092.01.T01
Chr2 exon 10482992 10483057 10482992 ID=MsG0280007092.01.T01:exon:3387;Parent=MsG0280007092.01.T01
Chr2 exon 10481704 10482062 10481704 ID=MsG0280007092.01.T01:exon:3386;Parent=MsG0280007092.01.T01
Chr2 exon 10480470 10481081 10480470 ID=MsG0280007092.01.T01:exon:3385;Parent=MsG0280007092.01.T01
Chr2 CDS 10483962 10484451 10483962 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Chr2 CDS 10483627 10483776 10483627 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Chr2 CDS 10483171 10483305 10483171 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Chr2 CDS 10482992 10483057 10482992 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Chr2 CDS 10481704 10482062 10481704 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Chr2 CDS 10480470 10481081 10480470 ID=MsG0280007092.01.T01:cds;Parent=MsG0280007092.01.T01
Gene Sequence

>MsG0280007092.01.T01

ATGGCTGAGATTGAGTTTGAAAGTTTGTTTAACCATGCCATGAGAGGGCAATGGAGAGAAGTTTTAGAGTCGTATGAGAAAAACCCTGAAGTATTGGAGGCAAAGATCACAAAAGCAGAAGACACAGTGCTACACATTGCTATATACGTGAGCCAAACAGTTTTTGTGACAACCTTGTTAGATAACATAAGCCAAGATATGTGCAGGAACATCCTAAGAATGCAAAACTCAAAGGGAAATACCCCTCTTCATGTTGCAGCAGAGCTTGGGAATGTAGACATTTGTAACAACATAGCCAGAAGAGATCCCATCCTCATTTCCTATCGAAATTTCGAAGGCGAAACTCCTCTTTTCTTGGCAGCTGTTCATGGAAAAAGAGATGCTTTCTTTTGTCTTCATGGTCGCCAACACAACAAAGATGATGACTCACTTTCAATCAAAAACAATGGAGACACTATTCTTCATTCTACCATATCCAGTGAATACTTTGGTTTGGCACTTCAAATAATTGGAATGTATCCAAAGCTTGTGAACGCTGTAAACCATGATGGATTATCACCTCTGCATATTCTTGCTAGGAAGCCTAATTGTTTTGGAAGCTGCACAAGGATGGATCTAATTGATCGTATCATCTACACTTGTTCAATTGTTGATGAGAACAAGGAAGAAAGATATGACCTTCAAGCACAAACTCAGACTACTCATCACTATCCATTGAACTATGGAACATGCATGACCTTCATATCTTTGTTGAATAGGTTTTTTAAAGTAACAACAACAGGAAAAGATACAAATGCTGCTGCAACTAGTGACGAAGAGAACCATTGCTCGCGAAATTTTGGAGCAACATGGGTAGAGAAAATCCAAAGGAGGAAGGAAAAACACATTCGGGCTACACAAGTAATGAATGAACTGATACAACGCGCTTCCTTATACAAGTATGATTTCACAGGACCAAGTCCTCATGTTGAAGAATTTGGTGGTGGTGGTGGTGGTGGTGGCATAGGCAAAATCAAGAGCAATACAGAAAATGAAGTTATTGAGAAGAGGAGAATGGTGTCACCTATCTTAATTGCAGCAAAGATGGGAGTGACTGAAATGATTGAAAAGATTCTAGATATGTACCCTGTGGCTATTCATGATGTGGACAGTCAGAACAAGAATGTTGTTCTTTTGGCCATAGAAAATAGGCAACCTCATCTTGTTAAGGACTCCATGCCACCTAATTTCTATGAACGTTATAATAAGGATGGGAAAACAGCAAAGCAAGTCTTCCTTGATACACACGCACCACTTGTAAAAGAAGGTAGTAAATGGCTCACCAAAACTGCAGAATCTTGCTCAGTGGTAGCAGCACTTGTTGCAACTGTTGCATTCACAACCTCAACAGCTATCCCAGGCGGTCCTGATCAAGAATCCGGCATACCACTACTGCTAAAAAAGCCTGCTTTCAAACTCTATGCTGTAGCATCACTTGTTGCACTTTGCTCCTCCGTCACAGCCCTTATTTTGTTTCTTTCCATACTCACATCTCGGTTTGAAGAAAAAGATTTTGTTATCGACTTACCAAGAAAGCTTCTTGTAGGGTTGACTACACTCTTCACATCTATAGCATCTGTTCTGGTCTCATTCTGTGCAGGACATTTCTTTATTGTTGAAGCCCAGATGAGATTTGCAGTTTATCCCATATATGCTGCAACATGTCTGCCTGTGTCCTTTTTTGCCTTGGTCCAACTCCCTCTGTACTTTGATCTGAGTTTGGCTATGTGTCGGAAGGTTCCTCAGCGCAGCTACAAAGTGTTCTTTCACTAG

Protein sequence

>MsG0280007092.01.T01

MAEIEFESLFNHAMRGQWREVLESYEKNPEVLEAKITKAEDTVLHIAIYVSQTVFVTTLLDNISQDMCRNILRMQNSKGNTPLHVAAELGNVDICNNIARRDPILISYRNFEGETPLFLAAVHGKRDAFFCLHGRQHNKDDDSLSIKNNGDTILHSTISSEYFGLALQIIGMYPKLVNAVNHDGLSPLHILARKPNCFGSCTRMDLIDRIIYTCSIVDENKEERYDLQAQTQTTHHYPLNYGTCMTFISLLNRFFKVTTTGKDTNAAATSDEENHCSRNFGATWVEKIQRRKEKHIRATQVMNELIQRASLYKYDFTGPSPHVEEFGGGGGGGGIGKIKSNTENEVIEKRRMVSPILIAAKMGVTEMIEKILDMYPVAIHDVDSQNKNVVLLAIENRQPHLVKDSMPPNFYERYNKDGKTAKQVFLDTHAPLVKEGSKWLTKTAESCSVVAALVATVAFTTSTAIPGGPDQESGIPLLLKKPAFKLYAVASLVALCSSVTALILFLSILTSRFEEKDFVIDLPRKLLVGLTTLFTSIASVLVSFCAGHFFIVEAQMRFAVYPIYAATCLPVSFFALVQLPLYFDLSLAMCRKVPQRSYKVFFH*