Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040554.01.T01 | XP_003625202.1 | 95.37 | 108 | 4 | 1 | 1 | 108 | 1 | 107 | 4.96E-54 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040554.01.T01 | Q9M2R1 | 42.975 | 121 | 50 | 5 | 1 | 108 | 1 | 115 | 8.19E-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040554.01.T01 | G7KUG0 | 95.370 | 108 | 4 | 1 | 1 | 108 | 1 | 107 | 2.37e-54 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048797.01 | MsG0780040554.01 | 0.850682 | 1.449791e-60 | 2.862602e-57 |
| MsG0180000367.01 | MsG0780040554.01 | 0.802859 | 4.593488e-49 | 2.274383e-46 |
| MsG0180000984.01 | MsG0780040554.01 | 0.820581 | 6.360091e-53 | 5.052024e-50 |
| MsG0180001719.01 | MsG0780040554.01 | 0.880495 | 5.236372e-70 | 2.957775e-66 |
| MsG0180002134.01 | MsG0780040554.01 | 0.826628 | 2.443971e-54 | 2.304390e-51 |
| MsG0180002135.01 | MsG0780040554.01 | 0.821094 | 4.846704e-53 | 3.905704e-50 |
| MsG0180002428.01 | MsG0780040554.01 | 0.809757 | 1.615603e-50 | 9.567022e-48 |
| MsG0180003504.01 | MsG0780040554.01 | 0.801031 | 1.090523e-48 | 5.155120e-46 |
| MsG0180003905.01 | MsG0780040554.01 | 0.882596 | 9.125186e-71 | 5.591304e-67 |
| MsG0180004120.01 | MsG0780040554.01 | 0.860620 | 1.819583e-63 | 5.004845e-60 |
| MsG0180004583.01 | MsG0780040554.01 | 0.810340 | 1.210057e-50 | 7.275064e-48 |
| MsG0180004828.01 | MsG0780040554.01 | 0.802028 | 6.814796e-49 | 3.303463e-46 |
| MsG0180005127.01 | MsG0780040554.01 | 0.800788 | 1.223047e-48 | 5.745314e-46 |
| MsG0180005621.01 | MsG0780040554.01 | 0.818733 | 1.680051e-52 | 1.267848e-49 |
| MsG0180005655.01 | MsG0780040554.01 | 0.851902 | 6.557956e-61 | 1.347006e-57 |
| MsG0180005678.01 | MsG0780040554.01 | 0.804374 | 2.227615e-49 | 1.146691e-46 |
| MsG0180005819.01 | MsG0780040554.01 | 0.861708 | 8.485409e-64 | 2.422179e-60 |
| MsG0180006010.01 | MsG0780040554.01 | 0.808959 | 2.396199e-50 | 1.388978e-47 |
| MsG0180006183.01 | MsG0780040554.01 | 0.858861 | 6.157610e-63 | 1.594369e-59 |
| MsG0180006253.01 | MsG0780040554.01 | 0.821201 | 4.580289e-53 | 3.702043e-50 |
| MsG0280006402.01 | MsG0780040554.01 | -0.815053 | 1.125724e-51 | 7.679678e-49 |
| MsG0780040459.01 | MsG0780040554.01 | 0.871311 | 7.525200e-67 | 3.021920e-63 |
| MsG0780040554.01 | MsG0780040899.01 | 0.829762 | 4.292746e-55 | 4.435976e-52 |
| MsG0780040554.01 | MsG0780040978.01 | 0.810633 | 1.046091e-50 | 6.338574e-48 |
| MsG0780040554.01 | MsG0780041232.01 | 0.837736 | 4.358933e-57 | 5.715007e-54 |
| MsG0780040554.01 | MsG0780041273.01 | 0.814446 | 1.534376e-51 | 1.029781e-48 |
| MsG0780040554.01 | MsG0780041560.01 | 0.823163 | 1.606035e-53 | 1.372140e-50 |
| MsG0780040554.01 | MsG0780041820.01 | 0.803790 | 2.947090e-49 | 1.494445e-46 |
| MsG0780040554.01 | MsG0780041823.01 | 0.807273 | 5.478102e-50 | 3.038256e-47 |
| MsG0780040554.01 | MsG0880041909.01 | -0.826386 | 2.791720e-54 | 2.614358e-51 |
| MsG0780040554.01 | MsG0880042392.01 | 0.818433 | 1.964817e-52 | 1.470669e-49 |
| MsG0780040554.01 | MsG0880043920.01 | 0.804015 | 2.645176e-49 | 1.349176e-46 |
| MsG0780040554.01 | MsG0880044139.01 | 0.818439 | 1.959603e-52 | 1.467004e-49 |
| MsG0780040554.01 | MsG0880044437.01 | 0.822343 | 2.492762e-53 | 2.080852e-50 |
| MsG0780040554.01 | MsG0880044545.01 | -0.817566 | 3.086198e-52 | 2.255369e-49 |
| MsG0780040554.01 | MsG0880044548.01 | -0.822612 | 2.157655e-53 | 1.815185e-50 |
| MsG0780040554.01 | MsG0880044834.01 | -0.826518 | 2.596127e-54 | 2.440163e-51 |
| MsG0780040554.01 | MsG0880045356.01 | 0.853680 | 2.035622e-61 | 4.434166e-58 |
| MsG0780040554.01 | MsG0880045584.01 | 0.802048 | 6.748912e-49 | 3.273272e-46 |
| MsG0780040554.01 | MsG0880045647.01 | 0.843826 | 1.103653e-58 | 1.747926e-55 |
| MsG0780040554.01 | MsG0880045725.01 | 0.819665 | 1.030933e-52 | 7.983622e-50 |
| MsG0780040554.01 | MsG0880045879.01 | 0.810006 | 1.428281e-50 | 8.513010e-48 |
| MsG0780040554.01 | MsG0880046905.01 | 0.807053 | 6.097653e-50 | 3.362496e-47 |
| MsG0780040554.01 | MsG0880047057.01 | 0.803773 | 2.969923e-49 | 1.505376e-46 |
| MsG0780040554.01 | MsG0880047414.01 | 0.868080 | 8.518159e-66 | 3.041987e-62 |
| MsG0780040554.01 | MsG0880047450.01 | 0.832861 | 7.422757e-56 | 8.402048e-53 |
| MsG0780040554.01 | MsG0880047664.01 | 0.805437 | 1.335508e-49 | 7.065321e-47 |
| MsG0780040554.01 | MsG0880047681.01 | 0.806586 | 7.656822e-50 | 4.171540e-47 |
| MsG0280010617.01 | MsG0780040554.01 | 0.836475 | 9.156041e-57 | 1.155157e-53 |
| MsG0280010825.01 | MsG0780040554.01 | 0.827965 | 1.168706e-54 | 1.145806e-51 |
| MsG0280010854.01 | MsG0780040554.01 | -0.808332 | 3.261833e-50 | 1.859976e-47 |
| MsG0280011271.01 | MsG0780040554.01 | 0.812153 | 4.893215e-51 | 3.087418e-48 |
| MsG0380014542.01 | MsG0780040554.01 | 0.871566 | 6.198664e-67 | 2.512202e-63 |
| MsG0380014544.01 | MsG0780040554.01 | 0.865988 | 3.960511e-65 | 1.313925e-61 |
| MsG0380014666.01 | MsG0780040554.01 | 0.821457 | 3.995917e-53 | 3.252567e-50 |
| MsG0680031356.01 | MsG0780040554.01 | 0.890535 | 9.025192e-74 | 7.619275e-70 |
| MsG0680034415.01 | MsG0780040554.01 | 0.800185 | 1.622918e-48 | 7.508239e-46 |
| MsG0480018486.01 | MsG0780040554.01 | 0.824285 | 8.768448e-54 | 7.732241e-51 |
| MsG0480018767.01 | MsG0780040554.01 | 0.801996 | 6.917114e-49 | 3.350360e-46 |
| MsG0480019601.01 | MsG0780040554.01 | 0.814134 | 1.798634e-51 | 1.196951e-48 |
| MsG0480019818.01 | MsG0780040554.01 | 0.806842 | 6.759962e-50 | 3.707430e-47 |
| MsG0480020398.01 | MsG0780040554.01 | 0.859287 | 4.589686e-63 | 1.205844e-59 |
| MsG0480020937.01 | MsG0780040554.01 | 0.922081 | 1.561589e-88 | 5.784085e-84 |
| MsG0480020938.01 | MsG0780040554.01 | -0.803611 | 3.210126e-49 | 1.620364e-46 |
| MsG0480021100.01 | MsG0780040554.01 | 0.870149 | 1.815321e-66 | 6.988099e-63 |
| MsG0480021175.01 | MsG0780040554.01 | 0.830366 | 3.058552e-55 | 3.215814e-52 |
| MsG0480021224.01 | MsG0780040554.01 | 0.831091 | 2.031965e-55 | 2.182453e-52 |
| MsG0480021436.01 | MsG0780040554.01 | 0.827124 | 1.860260e-54 | 1.779426e-51 |
| MsG0480021486.01 | MsG0780040554.01 | 0.803165 | 3.970949e-49 | 1.981563e-46 |
| MsG0480021740.01 | MsG0780040554.01 | 0.809544 | 1.795496e-50 | 1.057185e-47 |
| MsG0480021773.01 | MsG0780040554.01 | 0.868715 | 5.314234e-66 | 1.942032e-62 |
| MsG0480021902.01 | MsG0780040554.01 | 0.840578 | 7.992350e-58 | 1.143358e-54 |
| MsG0480022242.01 | MsG0780040554.01 | -0.814150 | 1.783727e-51 | 1.187554e-48 |
| MsG0480022244.01 | MsG0780040554.01 | -0.826718 | 2.325692e-54 | 2.198498e-51 |
| MsG0480022307.01 | MsG0780040554.01 | 0.860040 | 2.724050e-63 | 7.346007e-60 |
| MsG0480022378.01 | MsG0780040554.01 | 0.868285 | 7.315362e-66 | 2.631670e-62 |
| MsG0480023125.01 | MsG0780040554.01 | 0.839978 | 1.146584e-57 | 1.610275e-54 |
| MsG0480023386.01 | MsG0780040554.01 | -0.818396 | 2.003875e-52 | 1.498332e-49 |
| MsG0480023414.01 | MsG0780040554.01 | 0.877215 | 7.515395e-69 | 3.748888e-65 |
| MsG0480023424.01 | MsG0780040554.01 | 0.815861 | 7.442990e-52 | 5.191150e-49 |
| MsG0480023426.01 | MsG0780040554.01 | 0.880479 | 5.305944e-70 | 2.995007e-66 |
| MsG0480023575.01 | MsG0780040554.01 | 0.809630 | 1.720963e-50 | 1.015685e-47 |
| MsG0480023626.01 | MsG0780040554.01 | 0.848933 | 4.468609e-60 | 8.333859e-57 |
| MsG0480023706.01 | MsG0780040554.01 | 0.813620 | 2.333997e-51 | 1.531773e-48 |
| MsG0480023842.01 | MsG0780040554.01 | 0.891150 | 5.166998e-74 | 4.476675e-70 |
| MsG0480023913.01 | MsG0780040554.01 | 0.882017 | 1.481866e-70 | 8.880455e-67 |
| MsG0480024019.01 | MsG0780040554.01 | 0.914970 | 1.024773e-84 | 2.616204e-80 |
| MsG0580024276.01 | MsG0780040554.01 | 0.891100 | 5.403125e-74 | 4.672263e-70 |
| MsG0580025504.01 | MsG0780040554.01 | 0.862307 | 5.561707e-64 | 1.621272e-60 |
| MsG0580025633.01 | MsG0780040554.01 | 0.810455 | 1.142779e-50 | 6.891465e-48 |
| MsG0380015340.01 | MsG0780040554.01 | 0.860728 | 1.687231e-63 | 4.658389e-60 |
| MsG0380015393.01 | MsG0780040554.01 | 0.800512 | 1.391797e-48 | 6.492788e-46 |
| MsG0380015402.01 | MsG0780040554.01 | 0.841440 | 4.744554e-58 | 6.972514e-55 |
| MsG0380015557.01 | MsG0780040554.01 | 0.819789 | 9.655585e-53 | 7.503855e-50 |
| MsG0380015656.01 | MsG0780040554.01 | 0.853157 | 2.876089e-61 | 6.155303e-58 |
| MsG0380015954.01 | MsG0780040554.01 | 0.805735 | 1.156204e-49 | 6.164301e-47 |
| MsG0380016031.01 | MsG0780040554.01 | 0.832577 | 8.729726e-56 | 9.798066e-53 |
| MsG0380016250.01 | MsG0780040554.01 | 0.850605 | 1.524014e-60 | 3.001552e-57 |
| MsG0380016819.01 | MsG0780040554.01 | 0.833636 | 4.760749e-56 | 5.514792e-53 |
| MsG0380017128.01 | MsG0780040554.01 | 0.842972 | 1.865763e-58 | 2.876256e-55 |
| MsG0380017380.01 | MsG0780040554.01 | 0.800119 | 1.673933e-48 | 7.731260e-46 |
| MsG0380017416.01 | MsG0780040554.01 | 0.818577 | 1.822888e-52 | 1.369712e-49 |
| MsG0380017588.01 | MsG0780040554.01 | 0.815193 | 1.047811e-51 | 7.175397e-49 |
| MsG0380017696.01 | MsG0780040554.01 | 0.862736 | 4.103681e-64 | 1.214428e-60 |
| MsG0380018035.01 | MsG0780040554.01 | -0.814290 | 1.661179e-51 | 1.110204e-48 |
| MsG0480018111.01 | MsG0780040554.01 | 0.800725 | 1.259420e-48 | 5.907029e-46 |
| MsG0480018228.01 | MsG0780040554.01 | 0.908897 | 1.033400e-81 | 1.960031e-77 |
| MsG0480018362.01 | MsG0780040554.01 | 0.838785 | 2.339227e-57 | 3.166464e-54 |
| MsG0580026343.01 | MsG0780040554.01 | 0.839581 | 1.454250e-57 | 2.017026e-54 |
| MsG0580028927.01 | MsG0780040554.01 | 0.809236 | 2.091186e-50 | 1.221230e-47 |
| MsG0580028955.01 | MsG0780040554.01 | 0.841654 | 4.167442e-58 | 6.164524e-55 |
| MsG0580030141.01 | MsG0780040554.01 | 0.874372 | 7.110917e-68 | 3.193102e-64 |
| MsG0280006851.01 | MsG0780040554.01 | 0.824632 | 7.264778e-54 | 6.471830e-51 |
| MsG0280006909.01 | MsG0780040554.01 | 0.807074 | 6.036115e-50 | 3.330263e-47 |
| MsG0280006924.01 | MsG0780040554.01 | 0.829975 | 3.808928e-55 | 3.959749e-52 |
| MsG0280007423.01 | MsG0780040554.01 | -0.859632 | 3.615559e-63 | 9.612499e-60 |
| MsG0280007688.01 | MsG0780040554.01 | 0.841978 | 3.421837e-58 | 5.113638e-55 |
| MsG0280007695.01 | MsG0780040554.01 | 0.811117 | 8.218052e-51 | 5.044111e-48 |
| MsG0280007919.01 | MsG0780040554.01 | 0.829018 | 6.508268e-55 | 6.578829e-52 |
| MsG0280009980.01 | MsG0780040554.01 | 0.809674 | 1.683340e-50 | 9.946081e-48 |
| MsG0680035792.01 | MsG0780040554.01 | 0.812327 | 4.483559e-51 | 2.842293e-48 |
| MsG0780036553.01 | MsG0780040554.01 | 0.804333 | 2.272121e-49 | 1.168327e-46 |
| MsG0780038647.01 | MsG0780040554.01 | 0.852844 | 3.535598e-61 | 7.487654e-58 |
| MsG0780038736.01 | MsG0780040554.01 | 0.850240 | 1.930066e-60 | 3.756577e-57 |
| MsG0780039536.01 | MsG0780040554.01 | 0.875563 | 2.791077e-68 | 1.309346e-64 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040554.01.T01 | MTR_7g092570 | 95.370 | 108 | 4 | 1 | 1 | 108 | 1 | 107 | 6.01e-58 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040554.01.T01 | AT3G57860 | 42.975 | 121 | 50 | 5 | 1 | 108 | 1 | 115 | 8.35e-13 | 62.8 |
Find 40 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCGGCGGTCTCGTGCTTC+CGG | 0.391950 | 7:-79144667 | None:intergenic |
| GCTCGTGCGCGTCGTTCTCC+AGG | 0.444790 | 7:+79144841 | MsG0780040554.01.T01:CDS |
| TGCGCGTCGTTCTCCAGGTT+CGG | 0.449151 | 7:+79144846 | MsG0780040554.01.T01:CDS |
| ATATCCTGCAACGGCGTCCT+CGG | 0.451746 | 7:-79144949 | None:intergenic |
| GTACCCGAGGACGCCGTTGC+AGG | 0.452614 | 7:+79144945 | MsG0780040554.01.T01:CDS |
| CGATCTGAACCGGCGGTGAA+TGG | 0.459393 | 7:-79144781 | None:intergenic |
| ACGAGCAACTTCGCGACGTA+CGG | 0.459911 | 7:-79144824 | None:intergenic |
| GCGGTGAATGGAGCGGGTGC+AGG | 0.472928 | 7:-79144769 | None:intergenic |
| TCTTGAATCACGGCGGAGAA+AGG | 0.474672 | 7:-79144724 | None:intergenic |
| AGTGAAGAACCGATCTGAAC+CGG | 0.482402 | 7:-79144791 | None:intergenic |
| TATCCTGCAACGGCGTCCTC+GGG | 0.507871 | 7:-79144948 | None:intergenic |
| GAACCGGCGGTGAATGGAGC+GGG | 0.509648 | 7:-79144775 | None:intergenic |
| CTTCCACGGCGAGCGGTGGT+CGG | 0.514104 | 7:-79144880 | None:intergenic |
| TCTTCTTCCACGGCGAGCGG+TGG | 0.539685 | 7:-79144884 | None:intergenic |
| CGAGGAGTGTACTTCCGTCT+TGG | 0.543666 | 7:+79144923 | MsG0780040554.01.T01:CDS |
| ACCGCTCGCCGTGGAAGAAG+AGG | 0.550727 | 7:+79144886 | MsG0780040554.01.T01:CDS |
| CGAGCAACTTCGCGACGTAC+GGG | 0.553693 | 7:-79144823 | None:intergenic |
| GCCTCTTCTTCCACGGCGAG+CGG | 0.556561 | 7:-79144887 | None:intergenic |
| CCACGGCGAGCGGTGGTCGG+AGG | 0.576704 | 7:-79144877 | None:intergenic |
| CATTCACCGCCGGTTCAGAT+CGG | 0.577297 | 7:+79144782 | MsG0780040554.01.T01:CDS |
| AATAGAGTATCCACGTCAAG+AGG | 0.577745 | 7:-79144694 | None:intergenic |
| CCGCGTCATCCCTCTTGACG+TGG | 0.577863 | 7:+79144684 | MsG0780040554.01.T01:CDS |
| TGGAGCGGGTGCAGGTGTAA+CGG | 0.585593 | 7:-79144761 | None:intergenic |
| CCTCCGACCACCGCTCGCCG+TGG | 0.590863 | 7:+79144877 | MsG0780040554.01.T01:CDS |
| CGGCTCAGATTCTTGAATCA+CGG | 0.600207 | 7:-79144734 | None:intergenic |
| TGAACCGGCGGTGAATGGAG+CGG | 0.620027 | 7:-79144776 | None:intergenic |
| GGCGTCCTCGGGTACCAAGA+CGG | 0.620398 | 7:-79144937 | None:intergenic |
| TACTTCCGTCTTGGTACCCG+AGG | 0.623356 | 7:+79144932 | MsG0780040554.01.T01:CDS |
| GGTGCAGGTGTAACGGAGAG+CGG | 0.629682 | 7:-79144754 | None:intergenic |
| GCACCCGCTCCATTCACCGC+CGG | 0.637803 | 7:+79144772 | MsG0780040554.01.T01:CDS |
| CCACGTCAAGAGGGATGACG+CGG | 0.645758 | 7:-79144684 | None:intergenic |
| CACTCCTCGATGCAGTAGCA+CGG | 0.657446 | 7:-79144909 | None:intergenic |
| ATAGAGTATCCACGTCAAGA+GGG | 0.662352 | 7:-79144693 | None:intergenic |
| TAGCACGGCCTCTTCTTCCA+CGG | 0.680838 | 7:-79144894 | None:intergenic |
| TCACGGCGGAGAAAGGTCGT+CGG | 0.682516 | 7:-79144717 | None:intergenic |
| ATAGCAGTGATATCCTGCAA+CGG | 0.687557 | 7:-79144958 | None:intergenic |
| GAAGAACCGATCTGAACCGG+CGG | 0.705189 | 7:-79144788 | None:intergenic |
| CGTCAAGAGGGATGACGCGG+CGG | 0.719322 | 7:-79144681 | None:intergenic |
| CTCAGATTCTTGAATCACGG+CGG | 0.734730 | 7:-79144731 | None:intergenic |
| GAGGCCGTGCTACTGCATCG+AGG | 0.762826 | 7:+79144905 | MsG0780040554.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATAGCAGTGATATCCTGCAA+CGG | - | Chr7:79144961-79144980 | None:intergenic | 40.0% | |
| ! | AATAGAGTATCCACGTCAAG+AGG | - | Chr7:79144697-79144716 | None:intergenic | 40.0% |
| ! | ATAGAGTATCCACGTCAAGA+GGG | - | Chr7:79144696-79144715 | None:intergenic | 40.0% |
| AGTGAAGAACCGATCTGAAC+CGG | - | Chr7:79144794-79144813 | None:intergenic | 45.0% | |
| CGGCTCAGATTCTTGAATCA+CGG | - | Chr7:79144737-79144756 | None:intergenic | 45.0% | |
| CTCAGATTCTTGAATCACGG+CGG | - | Chr7:79144734-79144753 | None:intergenic | 45.0% | |
| TCTTGAATCACGGCGGAGAA+AGG | - | Chr7:79144727-79144746 | None:intergenic | 50.0% | |
| !!! | GGAGGAGTATTTTCCGAACC+TGG | - | Chr7:79144862-79144881 | None:intergenic | 50.0% |
| ACGAGCAACTTCGCGACGTA+CGG | - | Chr7:79144827-79144846 | None:intergenic | 55.0% | |
| ATATCCTGCAACGGCGTCCT+CGG | - | Chr7:79144952-79144971 | None:intergenic | 55.0% | |
| CACTCCTCGATGCAGTAGCA+CGG | - | Chr7:79144912-79144931 | None:intergenic | 55.0% | |
| GAAGAACCGATCTGAACCGG+CGG | - | Chr7:79144791-79144810 | None:intergenic | 55.0% | |
| TACTTCCGTCTTGGTACCCG+AGG | + | Chr7:79144932-79144951 | MsG0780040554.01.T01:CDS | 55.0% | |
| TAGCACGGCCTCTTCTTCCA+CGG | - | Chr7:79144897-79144916 | None:intergenic | 55.0% | |
| ! | CGAGGAGTGTACTTCCGTCT+TGG | + | Chr7:79144923-79144942 | MsG0780040554.01.T01:CDS | 55.0% |
| !! | CATTCACCGCCGGTTCAGAT+CGG | + | Chr7:79144782-79144801 | MsG0780040554.01.T01:CDS | 55.0% |
| CCACGTCAAGAGGGATGACG+CGG | - | Chr7:79144687-79144706 | None:intergenic | 60.0% | |
| CGAGCAACTTCGCGACGTAC+GGG | - | Chr7:79144826-79144845 | None:intergenic | 60.0% | |
| CGATCTGAACCGGCGGTGAA+TGG | - | Chr7:79144784-79144803 | None:intergenic | 60.0% | |
| TATCCTGCAACGGCGTCCTC+GGG | - | Chr7:79144951-79144970 | None:intergenic | 60.0% | |
| TCACGGCGGAGAAAGGTCGT+CGG | - | Chr7:79144720-79144739 | None:intergenic | 60.0% | |
| TGAACCGGCGGTGAATGGAG+CGG | - | Chr7:79144779-79144798 | None:intergenic | 60.0% | |
| TGCGCGTCGTTCTCCAGGTT+CGG | + | Chr7:79144846-79144865 | MsG0780040554.01.T01:CDS | 60.0% | |
| TGGAGCGGGTGCAGGTGTAA+CGG | - | Chr7:79144764-79144783 | None:intergenic | 60.0% | |
| ! | GGTGCAGGTGTAACGGAGAG+CGG | - | Chr7:79144757-79144776 | None:intergenic | 60.0% |
| ACCGCTCGCCGTGGAAGAAG+AGG | + | Chr7:79144886-79144905 | MsG0780040554.01.T01:CDS | 65.0% | |
| CCGCGTCATCCCTCTTGACG+TGG | + | Chr7:79144684-79144703 | MsG0780040554.01.T01:CDS | 65.0% | |
| CGTCAAGAGGGATGACGCGG+CGG | - | Chr7:79144684-79144703 | None:intergenic | 65.0% | |
| GAACCGGCGGTGAATGGAGC+GGG | - | Chr7:79144778-79144797 | None:intergenic | 65.0% | |
| GCCTCTTCTTCCACGGCGAG+CGG | - | Chr7:79144890-79144909 | None:intergenic | 65.0% | |
| GGCGTCCTCGGGTACCAAGA+CGG | - | Chr7:79144940-79144959 | None:intergenic | 65.0% | |
| TCTTCTTCCACGGCGAGCGG+TGG | - | Chr7:79144887-79144906 | None:intergenic | 65.0% | |
| ! | GAGGCCGTGCTACTGCATCG+AGG | + | Chr7:79144905-79144924 | MsG0780040554.01.T01:CDS | 65.0% |
| ACGCGGCGGTCTCGTGCTTC+CGG | - | Chr7:79144670-79144689 | None:intergenic | 70.0% | |
| CTTCCACGGCGAGCGGTGGT+CGG | - | Chr7:79144883-79144902 | None:intergenic | 70.0% | |
| GCACCCGCTCCATTCACCGC+CGG | + | Chr7:79144772-79144791 | MsG0780040554.01.T01:CDS | 70.0% | |
| GCGGTGAATGGAGCGGGTGC+AGG | - | Chr7:79144772-79144791 | None:intergenic | 70.0% | |
| GCTCGTGCGCGTCGTTCTCC+AGG | + | Chr7:79144841-79144860 | MsG0780040554.01.T01:CDS | 70.0% | |
| GTACCCGAGGACGCCGTTGC+AGG | + | Chr7:79144945-79144964 | MsG0780040554.01.T01:CDS | 70.0% | |
| ! | CCACGGCGAGCGGTGGTCGG+AGG | - | Chr7:79144880-79144899 | None:intergenic | 80.0% |
| ! | CCTCCGACCACCGCTCGCCG+TGG | + | Chr7:79144877-79144896 | MsG0780040554.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79144664 | 79144999 | 79144664 | ID=MsG0780040554.01;Name=MsG0780040554.01 |
| Chr7 | mRNA | 79144664 | 79144999 | 79144664 | ID=MsG0780040554.01.T01;Parent=MsG0780040554.01;Name=MsG0780040554.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|111 |
| Chr7 | exon | 79144664 | 79144999 | 79144664 | ID=MsG0780040554.01.T01:exon:2891;Parent=MsG0780040554.01.T01 |
| Chr7 | CDS | 79144664 | 79144999 | 79144664 | ID=MsG0780040554.01.T01:cds;Parent=MsG0780040554.01.T01 |
| Gene Sequence |
| Protein sequence |
