Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030328.01.T01 | XP_013450747.3 | 97.619 | 168 | 4 | 0 | 57 | 224 | 328 | 495 | 1.16E-110 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030328.01.T01 | Q9FVS9 | 46.023 | 176 | 85 | 2 | 49 | 224 | 323 | 488 | 1.45E-49 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030328.01.T01 | A0A072UG69 | 97.619 | 168 | 4 | 0 | 57 | 224 | 328 | 495 | 5.52e-111 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0680030328.01 | 0.822427 | 2.383060e-53 | 1.994126e-50 |
| MsG0180000404.01 | MsG0680030328.01 | 0.820716 | 5.920835e-53 | 4.721020e-50 |
| MsG0180000782.01 | MsG0680030328.01 | 0.830575 | 2.718105e-55 | 2.875111e-52 |
| MsG0180001771.01 | MsG0680030328.01 | 0.801004 | 1.104497e-48 | 5.217689e-46 |
| MsG0180003741.01 | MsG0680030328.01 | 0.878150 | 3.543132e-69 | 1.829930e-65 |
| MsG0180005113.01 | MsG0680030328.01 | 0.843135 | 1.688186e-58 | 2.615826e-55 |
| MsG0180005153.01 | MsG0680030328.01 | 0.840587 | 7.949032e-58 | 1.137491e-54 |
| MsG0180006017.01 | MsG0680030328.01 | 0.827142 | 1.842089e-54 | 1.763042e-51 |
| MsG0280006405.01 | MsG0680030328.01 | 0.804645 | 1.955770e-49 | 1.013794e-46 |
| MsG0280010778.01 | MsG0680030328.01 | 0.800601 | 1.335173e-48 | 6.242698e-46 |
| MsG0380011496.01 | MsG0680030328.01 | 0.847706 | 9.762094e-60 | 1.750119e-56 |
| MsG0380011501.01 | MsG0680030328.01 | 0.840333 | 9.264803e-58 | 1.315307e-54 |
| MsG0480019279.01 | MsG0680030328.01 | 0.807476 | 4.962702e-50 | 2.766871e-47 |
| MsG0480020064.01 | MsG0680030328.01 | 0.819359 | 1.210835e-52 | 9.296451e-50 |
| MsG0480020096.01 | MsG0680030328.01 | 0.808043 | 3.758819e-50 | 2.126919e-47 |
| MsG0480021195.01 | MsG0680030328.01 | 0.802722 | 4.903365e-49 | 2.419437e-46 |
| MsG0480021452.01 | MsG0680030328.01 | 0.800167 | 1.636113e-48 | 7.565827e-46 |
| MsG0480022696.01 | MsG0680030328.01 | 0.800292 | 1.543064e-48 | 7.158673e-46 |
| MsG0480024022.01 | MsG0680030328.01 | 0.848523 | 5.804132e-60 | 1.068173e-56 |
| MsG0580024197.01 | MsG0680030328.01 | 0.812841 | 3.460000e-51 | 2.223267e-48 |
| MsG0580024443.01 | MsG0680030328.01 | 0.808980 | 2.371576e-50 | 1.375465e-47 |
| MsG0580024966.01 | MsG0680030328.01 | 0.802559 | 5.298182e-49 | 2.603177e-46 |
| MsG0580025466.01 | MsG0680030328.01 | 0.827309 | 1.679676e-54 | 1.615572e-51 |
| MsG0580025587.01 | MsG0680030328.01 | 0.808148 | 3.571548e-50 | 2.026659e-47 |
| MsG0380014926.01 | MsG0680030328.01 | 0.806849 | 6.736529e-50 | 3.695300e-47 |
| MsG0380016860.01 | MsG0680030328.01 | 0.808287 | 3.336115e-50 | 1.899987e-47 |
| MsG0380016970.01 | MsG0680030328.01 | 0.807407 | 5.131243e-50 | 2.855810e-47 |
| MsG0480018200.01 | MsG0680030328.01 | 0.820605 | 6.280282e-53 | 4.991962e-50 |
| MsG0580027655.01 | MsG0680030328.01 | 0.818605 | 1.796501e-52 | 1.350897e-49 |
| MsG0580027826.01 | MsG0680030328.01 | 0.820476 | 6.723092e-53 | 5.325235e-50 |
| MsG0580027925.01 | MsG0680030328.01 | 0.865143 | 7.313713e-65 | 2.354687e-61 |
| MsG0580028436.01 | MsG0680030328.01 | 0.807181 | 5.729924e-50 | 3.170263e-47 |
| MsG0580028960.01 | MsG0680030328.01 | 0.825042 | 5.816056e-54 | 5.242125e-51 |
| MsG0580029236.01 | MsG0680030328.01 | 0.816924 | 4.303918e-52 | 3.090559e-49 |
| MsG0580029310.01 | MsG0680030328.01 | 0.848584 | 5.585712e-60 | 1.029888e-56 |
| MsG0580029736.01 | MsG0680030328.01 | 0.842866 | 1.990413e-58 | 3.058297e-55 |
| MsG0680030328.01 | MsG0680030329.01 | 0.818994 | 1.465437e-52 | 1.114052e-49 |
| MsG0680030328.01 | MsG0680030784.01 | 0.828478 | 8.791891e-55 | 8.749131e-52 |
| MsG0680030328.01 | MsG0680031428.01 | 0.808835 | 2.547494e-50 | 1.471744e-47 |
| MsG0680030328.01 | MsG0680031621.01 | 0.835106 | 2.035058e-56 | 2.463643e-53 |
| MsG0680030328.01 | MsG0680031707.01 | 0.801182 | 1.015912e-48 | 4.820427e-46 |
| MsG0680030328.01 | MsG0680031959.01 | 0.822171 | 2.732109e-53 | 2.269285e-50 |
| MsG0680030328.01 | MsG0680034853.01 | 0.802315 | 5.947721e-49 | 2.904556e-46 |
| MsG0680030328.01 | MsG0780036307.01 | 0.808325 | 3.273882e-50 | 1.866492e-47 |
| MsG0680030328.01 | MsG0780036593.01 | 0.816067 | 6.695214e-52 | 4.696356e-49 |
| MsG0680030328.01 | MsG0780036757.01 | 0.821374 | 4.176946e-53 | 3.392065e-50 |
| MsG0680030328.01 | MsG0780037341.01 | 0.811005 | 8.689809e-51 | 5.318629e-48 |
| MsG0680030328.01 | MsG0780038847.01 | 0.819422 | 1.171111e-52 | 9.008092e-50 |
| MsG0680030328.01 | MsG0780039443.01 | 0.802776 | 4.777097e-49 | 2.360432e-46 |
| MsG0680030328.01 | MsG0780040286.01 | 0.823763 | 1.162402e-53 | 1.010233e-50 |
| MsG0680030328.01 | MsG0780040287.01 | 0.822735 | 2.020200e-53 | 1.705387e-50 |
| MsG0680030328.01 | MsG0780040430.01 | 0.843270 | 1.553115e-58 | 2.417290e-55 |
| MsG0680030328.01 | MsG0780040431.01 | 0.829723 | 4.388882e-55 | 4.529784e-52 |
| MsG0680030328.01 | MsG0780040846.01 | 0.872751 | 2.499781e-67 | 1.058149e-63 |
| MsG0680030328.01 | MsG0780040888.01 | 0.801687 | 8.005985e-49 | 3.847367e-46 |
| MsG0680030328.01 | MsG0780041259.01 | 0.871557 | 6.242242e-67 | 2.528976e-63 |
| MsG0680030328.01 | MsG0780041698.01 | 0.854983 | 8.558578e-62 | 1.946225e-58 |
| MsG0680030328.01 | MsG0780041699.01 | 0.854214 | 1.428438e-61 | 3.167322e-58 |
| MsG0680030328.01 | MsG0880041834.01 | 0.802448 | 5.584297e-49 | 2.736146e-46 |
| MsG0680030328.01 | MsG0880041858.01 | 0.816459 | 5.469662e-52 | 3.877728e-49 |
| MsG0680030328.01 | MsG0880042732.01 | 0.805885 | 1.075533e-49 | 5.755939e-47 |
| MsG0680030328.01 | MsG0880042958.01 | 0.824240 | 8.983660e-54 | 7.912188e-51 |
| MsG0680030328.01 | MsG0880042959.01 | 0.803343 | 3.647709e-49 | 1.828520e-46 |
| MsG0680030328.01 | MsG0880043037.01 | 0.813353 | 2.672713e-51 | 1.741387e-48 |
| MsG0680030328.01 | MsG0880044704.01 | 0.831302 | 1.802906e-55 | 1.948472e-52 |
| MsG0680030328.01 | MsG0880045585.01 | 0.817190 | 3.750045e-52 | 2.712414e-49 |
| MsG0680030328.01 | MsG0880047135.01 | 0.812353 | 4.424417e-51 | 2.806832e-48 |
| MsG0680030328.01 | MsG0880047764.01 | 0.803787 | 2.950002e-49 | 1.495851e-46 |
| MsG0280006592.01 | MsG0680030328.01 | 0.826216 | 3.063292e-54 | 2.854764e-51 |
| MsG0280006937.01 | MsG0680030328.01 | 0.830948 | 2.202588e-55 | 2.355726e-52 |
| MsG0280006966.01 | MsG0680030328.01 | 0.813660 | 2.287230e-51 | 1.502694e-48 |
| MsG0280007432.01 | MsG0680030328.01 | 0.816383 | 5.689745e-52 | 4.025570e-49 |
| MsG0280007506.01 | MsG0680030328.01 | 0.828536 | 8.514018e-55 | 8.486809e-52 |
| MsG0280007515.01 | MsG0680030328.01 | 0.805463 | 1.318789e-49 | 6.981829e-47 |
| MsG0280007955.01 | MsG0680030328.01 | 0.840237 | 9.814966e-58 | 1.389438e-54 |
| MsG0280008390.01 | MsG0680030328.01 | 0.848257 | 6.877879e-60 | 1.254755e-56 |
| MsG0280008391.01 | MsG0680030328.01 | 0.835275 | 1.844676e-56 | 2.244988e-53 |
| MsG0280008392.01 | MsG0680030328.01 | 0.843690 | 1.200047e-58 | 1.892558e-55 |
| MsG0280008395.01 | MsG0680030328.01 | 0.842043 | 3.289582e-58 | 4.925790e-55 |
| MsG0280008866.01 | MsG0680030328.01 | 0.815931 | 7.177225e-52 | 5.015542e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030328.01.T01 | MTR_6g004630 | 97.619 | 168 | 4 | 0 | 57 | 224 | 328 | 495 | 1.40e-114 | 341 |
| MsG0680030328.01.T01 | MTR_6g004630 | 85.714 | 35 | 5 | 0 | 1 | 35 | 92 | 126 | 5.44e-13 | 70.1 |
| MsG0680030328.01.T01 | MTR_6g004610 | 95.238 | 168 | 8 | 0 | 57 | 224 | 288 | 455 | 1.44e-112 | 335 |
| MsG0680030328.01.T01 | MTR_6g004610 | 60.938 | 64 | 20 | 2 | 1 | 64 | 52 | 110 | 5.64e-15 | 75.9 |
| MsG0680030328.01.T01 | MTR_6g004670 | 86.982 | 169 | 21 | 1 | 57 | 224 | 329 | 497 | 2.35e-102 | 310 |
| MsG0680030328.01.T01 | MTR_6g004670 | 54.688 | 64 | 24 | 2 | 1 | 64 | 92 | 150 | 5.90e-13 | 69.7 |
| MsG0680030328.01.T01 | MTR_6g004600 | 69.643 | 168 | 51 | 0 | 57 | 224 | 340 | 507 | 4.10e-77 | 245 |
| MsG0680030328.01.T01 | MTR_6g004590 | 69.643 | 168 | 51 | 0 | 57 | 224 | 340 | 507 | 1.86e-75 | 241 |
| MsG0680030328.01.T01 | MTR_8g088470 | 62.722 | 169 | 61 | 1 | 58 | 224 | 315 | 483 | 1.50e-70 | 228 |
| MsG0680030328.01.T01 | MTR_7g033580 | 64.286 | 168 | 59 | 1 | 58 | 224 | 319 | 486 | 2.22e-70 | 227 |
| MsG0680030328.01.T01 | MTR_7g033570 | 65.089 | 169 | 58 | 1 | 57 | 224 | 318 | 486 | 5.43e-70 | 226 |
| MsG0680030328.01.T01 | MTR_4g012320 | 59.524 | 168 | 67 | 1 | 58 | 224 | 48 | 215 | 2.06e-68 | 214 |
| MsG0680030328.01.T01 | MTR_1g035760 | 60.947 | 169 | 65 | 1 | 57 | 224 | 303 | 471 | 1.01e-66 | 217 |
| MsG0680030328.01.T01 | MTR_1g035750 | 59.763 | 169 | 67 | 1 | 57 | 224 | 329 | 497 | 4.29e-66 | 216 |
| MsG0680030328.01.T01 | MTR_1g036130 | 60.947 | 169 | 65 | 1 | 57 | 224 | 330 | 498 | 1.65e-65 | 215 |
| MsG0680030328.01.T01 | MTR_1g035940 | 59.763 | 169 | 67 | 1 | 57 | 224 | 331 | 499 | 1.69e-65 | 215 |
| MsG0680030328.01.T01 | MTR_1g035830 | 59.763 | 169 | 67 | 1 | 57 | 224 | 331 | 499 | 1.76e-65 | 215 |
| MsG0680030328.01.T01 | MTR_1g036010 | 60.355 | 169 | 66 | 1 | 57 | 224 | 331 | 499 | 3.03e-65 | 214 |
| MsG0680030328.01.T01 | MTR_1g035670 | 59.172 | 169 | 68 | 1 | 57 | 224 | 326 | 494 | 4.01e-65 | 214 |
| MsG0680030328.01.T01 | MTR_1g035580 | 59.524 | 168 | 58 | 1 | 57 | 224 | 331 | 488 | 2.17e-64 | 212 |
| MsG0680030328.01.T01 | MTR_1g050362 | 59.524 | 168 | 66 | 1 | 57 | 222 | 330 | 497 | 2.20e-64 | 212 |
| MsG0680030328.01.T01 | MTR_1g036200 | 58.824 | 170 | 68 | 1 | 57 | 224 | 322 | 491 | 2.90e-64 | 211 |
| MsG0680030328.01.T01 | MTR_1g035790 | 58.580 | 169 | 68 | 1 | 58 | 224 | 326 | 494 | 1.51e-62 | 207 |
| MsG0680030328.01.T01 | MTR_1g035800 | 58.235 | 170 | 69 | 1 | 57 | 224 | 335 | 504 | 2.60e-62 | 207 |
| MsG0680030328.01.T01 | MTR_1g069715 | 61.039 | 154 | 59 | 1 | 57 | 209 | 249 | 402 | 3.61e-62 | 210 |
| MsG0680030328.01.T01 | MTR_1g036270 | 55.689 | 167 | 72 | 1 | 58 | 222 | 336 | 502 | 1.24e-60 | 202 |
| MsG0680030328.01.T01 | MTR_3g077410 | 78.295 | 129 | 27 | 1 | 204 | 332 | 25 | 152 | 5.84e-59 | 193 |
| MsG0680030328.01.T01 | MTR_4g105310 | 63.433 | 134 | 49 | 0 | 199 | 332 | 30 | 163 | 6.37e-50 | 167 |
| MsG0680030328.01.T01 | MTR_4g105310 | 63.433 | 134 | 49 | 0 | 199 | 332 | 30 | 163 | 3.12e-49 | 168 |
| MsG0680030328.01.T01 | MTR_1g035860 | 63.866 | 119 | 42 | 1 | 57 | 174 | 332 | 450 | 8.71e-46 | 162 |
| MsG0680030328.01.T01 | MTR_1g037550 | 43.503 | 177 | 90 | 2 | 58 | 224 | 363 | 539 | 1.81e-43 | 157 |
| MsG0680030328.01.T01 | MTR_5g070010 | 40.761 | 184 | 96 | 2 | 54 | 224 | 317 | 500 | 4.10e-43 | 155 |
| MsG0680030328.01.T01 | MTR_1g037560 | 41.714 | 175 | 94 | 1 | 58 | 224 | 361 | 535 | 2.35e-42 | 154 |
| MsG0680030328.01.T01 | MTR_8g030590 | 40.217 | 184 | 96 | 3 | 54 | 224 | 320 | 502 | 4.19e-41 | 150 |
| MsG0680030328.01.T01 | MTR_8g098435 | 40.110 | 182 | 97 | 2 | 54 | 224 | 317 | 497 | 5.06e-41 | 150 |
| MsG0680030328.01.T01 | MTR_4g075110 | 40.571 | 175 | 95 | 2 | 58 | 224 | 368 | 541 | 6.08e-40 | 148 |
| MsG0680030328.01.T01 | MTR_7g096320 | 39.490 | 157 | 84 | 3 | 58 | 210 | 329 | 478 | 1.21e-35 | 135 |
| MsG0680030328.01.T01 | MTR_7g096340 | 40.000 | 150 | 80 | 2 | 58 | 203 | 328 | 471 | 8.48e-35 | 133 |
| MsG0680030328.01.T01 | MTR_3g463060 | 37.143 | 175 | 104 | 2 | 54 | 224 | 322 | 494 | 9.22e-34 | 130 |
| MsG0680030328.01.T01 | MTR_1g070365 | 35.714 | 182 | 104 | 5 | 49 | 224 | 322 | 496 | 2.99e-33 | 129 |
| MsG0680030328.01.T01 | MTR_7g088330 | 39.333 | 150 | 86 | 3 | 80 | 224 | 351 | 500 | 5.89e-33 | 128 |
| MsG0680030328.01.T01 | MTR_8g022500 | 59.843 | 127 | 26 | 1 | 209 | 335 | 418 | 519 | 9.17e-33 | 127 |
| MsG0680030328.01.T01 | MTR_1g102210 | 35.714 | 182 | 105 | 2 | 55 | 227 | 177 | 355 | 2.78e-32 | 124 |
| MsG0680030328.01.T01 | MTR_7g029275 | 36.310 | 168 | 99 | 3 | 49 | 213 | 327 | 489 | 3.97e-32 | 125 |
| MsG0680030328.01.T01 | MTR_1g070345 | 37.333 | 150 | 84 | 2 | 58 | 203 | 330 | 473 | 4.21e-32 | 125 |
| MsG0680030328.01.T01 | MTR_1g102220 | 35.593 | 177 | 101 | 3 | 58 | 224 | 325 | 498 | 1.18e-31 | 124 |
| MsG0680030328.01.T01 | MTR_8g035810 | 38.272 | 162 | 87 | 4 | 57 | 208 | 327 | 485 | 4.39e-31 | 122 |
| MsG0680030328.01.T01 | MTR_3g080580 | 33.673 | 196 | 104 | 3 | 59 | 228 | 329 | 524 | 5.24e-31 | 122 |
| MsG0680030328.01.T01 | MTR_4g054920 | 40.625 | 128 | 75 | 1 | 79 | 206 | 363 | 489 | 9.40e-31 | 122 |
| MsG0680030328.01.T01 | MTR_1g060550 | 39.216 | 153 | 89 | 2 | 58 | 207 | 332 | 483 | 1.07e-30 | 122 |
| MsG0680030328.01.T01 | MTR_8g035780 | 39.073 | 151 | 81 | 3 | 57 | 198 | 327 | 475 | 6.30e-30 | 119 |
| MsG0680030328.01.T01 | MTR_8g035820 | 38.650 | 163 | 85 | 5 | 57 | 208 | 326 | 484 | 9.90e-30 | 119 |
| MsG0680030328.01.T01 | MTR_8g035680 | 31.609 | 174 | 113 | 1 | 58 | 225 | 184 | 357 | 1.23e-29 | 116 |
| MsG0680030328.01.T01 | MTR_8g035860 | 37.037 | 162 | 89 | 4 | 57 | 208 | 326 | 484 | 2.07e-29 | 118 |
| MsG0680030328.01.T01 | MTR_8g035760 | 32.184 | 174 | 112 | 1 | 58 | 225 | 330 | 503 | 3.17e-29 | 117 |
| MsG0680030328.01.T01 | MTR_8g099995 | 48.696 | 115 | 59 | 0 | 218 | 332 | 36 | 150 | 6.08e-29 | 114 |
| MsG0680030328.01.T01 | MTR_8g035680 | 31.609 | 174 | 113 | 1 | 58 | 225 | 331 | 504 | 6.78e-29 | 116 |
| MsG0680030328.01.T01 | MTR_6g053600 | 50.877 | 114 | 56 | 0 | 221 | 334 | 27 | 140 | 1.52e-28 | 112 |
| MsG0680030328.01.T01 | MTR_2g086040 | 36.250 | 160 | 97 | 4 | 49 | 208 | 318 | 472 | 2.14e-28 | 115 |
| MsG0680030328.01.T01 | MTR_5g019140 | 40.625 | 128 | 75 | 1 | 82 | 209 | 381 | 507 | 5.05e-28 | 114 |
| MsG0680030328.01.T01 | MTR_4g119660 | 40.625 | 128 | 75 | 1 | 82 | 209 | 366 | 492 | 5.53e-28 | 114 |
| MsG0680030328.01.T01 | MTR_6g053550 | 50.000 | 114 | 57 | 0 | 221 | 334 | 41 | 154 | 3.33e-27 | 109 |
| MsG0680030328.01.T01 | MTR_1g100305 | 46.491 | 114 | 61 | 0 | 221 | 334 | 33 | 146 | 9.46e-26 | 105 |
| MsG0680030328.01.T01 | MTR_8g098415 | 43.860 | 114 | 64 | 0 | 221 | 334 | 33 | 146 | 2.62e-25 | 102 |
| MsG0680030328.01.T01 | MTR_8g098415 | 43.860 | 114 | 64 | 0 | 221 | 334 | 33 | 146 | 1.22e-24 | 102 |
| MsG0680030328.01.T01 | MTR_1g100395 | 48.246 | 114 | 59 | 0 | 221 | 334 | 33 | 146 | 1.36e-24 | 102 |
| MsG0680030328.01.T01 | MTR_8g098415 | 43.860 | 114 | 64 | 0 | 221 | 334 | 33 | 146 | 1.47e-24 | 102 |
| MsG0680030328.01.T01 | MTR_7g099850 | 43.511 | 131 | 70 | 1 | 204 | 334 | 25 | 151 | 4.07e-24 | 100 |
| MsG0680030328.01.T01 | MTR_1g068970 | 46.491 | 114 | 61 | 0 | 221 | 334 | 38 | 151 | 6.89e-24 | 100 |
| MsG0680030328.01.T01 | MTR_1g100335 | 45.614 | 114 | 62 | 0 | 221 | 334 | 33 | 146 | 1.63e-23 | 98.2 |
| MsG0680030328.01.T01 | MTR_1g100335 | 45.614 | 114 | 62 | 0 | 221 | 334 | 33 | 146 | 1.77e-23 | 98.2 |
| MsG0680030328.01.T01 | MTR_8g046580 | 31.356 | 236 | 114 | 10 | 6 | 207 | 71 | 292 | 2.26e-23 | 98.6 |
| MsG0680030328.01.T01 | MTR_1g100315 | 44.737 | 114 | 63 | 0 | 221 | 334 | 33 | 146 | 2.72e-23 | 98.6 |
| MsG0680030328.01.T01 | MTR_1g100335 | 45.614 | 114 | 62 | 0 | 221 | 334 | 33 | 146 | 4.39e-23 | 97.8 |
| MsG0680030328.01.T01 | MTR_8g035810 | 38.281 | 128 | 66 | 4 | 57 | 174 | 327 | 451 | 4.47e-20 | 90.9 |
| MsG0680030328.01.T01 | MTR_8g098415 | 41.573 | 89 | 52 | 0 | 246 | 334 | 1 | 89 | 5.82e-16 | 77.0 |
| MsG0680030328.01.T01 | MTR_1g070370 | 38.710 | 93 | 51 | 1 | 58 | 150 | 156 | 242 | 6.14e-16 | 76.6 |
| MsG0680030328.01.T01 | MTR_2g010250 | 31.579 | 171 | 111 | 6 | 58 | 223 | 327 | 496 | 1.39e-14 | 74.7 |
| MsG0680030328.01.T01 | MTR_8g035790 | 46.032 | 63 | 33 | 1 | 136 | 198 | 1 | 62 | 2.62e-14 | 68.6 |
| MsG0680030328.01.T01 | MTR_6g017325 | 30.682 | 176 | 98 | 9 | 59 | 229 | 344 | 500 | 1.25e-13 | 72.0 |
| MsG0680030328.01.T01 | MTR_2g010290 | 30.409 | 171 | 113 | 6 | 58 | 223 | 354 | 523 | 1.33e-13 | 72.0 |
| MsG0680030328.01.T01 | MTR_1g068970 | 42.857 | 84 | 48 | 0 | 251 | 334 | 1 | 84 | 2.00e-13 | 69.7 |
| MsG0680030328.01.T01 | MTR_8g098565 | 28.387 | 155 | 106 | 3 | 58 | 208 | 326 | 479 | 2.16e-13 | 71.2 |
| MsG0680030328.01.T01 | MTR_6g072490 | 29.885 | 174 | 106 | 7 | 59 | 229 | 346 | 506 | 2.41e-13 | 71.2 |
| MsG0680030328.01.T01 | MTR_5g018500 | 27.500 | 160 | 108 | 5 | 48 | 203 | 5 | 160 | 3.47e-13 | 67.8 |
| MsG0680030328.01.T01 | MTR_2g010330 | 29.870 | 154 | 104 | 3 | 58 | 208 | 329 | 481 | 3.94e-13 | 70.5 |
| MsG0680030328.01.T01 | MTR_7g006900 | 31.034 | 145 | 86 | 6 | 81 | 222 | 327 | 460 | 6.79e-13 | 69.7 |
| MsG0680030328.01.T01 | MTR_5g034900 | 28.387 | 155 | 109 | 2 | 56 | 209 | 339 | 492 | 9.06e-13 | 69.3 |
| MsG0680030328.01.T01 | MTR_2g072400 | 28.736 | 174 | 108 | 6 | 59 | 229 | 349 | 509 | 3.57e-12 | 67.4 |
| MsG0680030328.01.T01 | MTR_2g010280 | 32.117 | 137 | 89 | 3 | 58 | 191 | 325 | 460 | 4.27e-12 | 67.4 |
| MsG0680030328.01.T01 | MTR_2g010320 | 27.922 | 154 | 107 | 3 | 58 | 208 | 325 | 477 | 4.51e-12 | 67.0 |
| MsG0680030328.01.T01 | MTR_7g098550 | 27.604 | 192 | 115 | 7 | 50 | 240 | 336 | 504 | 7.87e-12 | 66.6 |
| MsG0680030328.01.T01 | MTR_7g098550 | 27.604 | 192 | 115 | 7 | 50 | 240 | 328 | 496 | 8.52e-12 | 66.2 |
| MsG0680030328.01.T01 | MTR_2g010380 | 29.299 | 157 | 106 | 4 | 58 | 210 | 331 | 486 | 9.39e-12 | 66.2 |
| MsG0680030328.01.T01 | MTR_2g072340 | 27.326 | 172 | 111 | 6 | 59 | 228 | 349 | 508 | 2.12e-11 | 65.1 |
| MsG0680030328.01.T01 | MTR_5g095230 | 26.744 | 172 | 112 | 5 | 59 | 228 | 347 | 506 | 4.13e-11 | 64.3 |
| MsG0680030328.01.T01 | MTR_1g107300 | 25.581 | 129 | 94 | 2 | 87 | 215 | 54 | 180 | 4.56e-11 | 62.0 |
| MsG0680030328.01.T01 | MTR_2g072380 | 28.324 | 173 | 108 | 7 | 59 | 228 | 184 | 343 | 4.58e-11 | 63.5 |
| MsG0680030328.01.T01 | MTR_6g008500 | 29.688 | 128 | 85 | 3 | 61 | 187 | 362 | 485 | 4.79e-11 | 63.9 |
| MsG0680030328.01.T01 | MTR_4g031820 | 27.746 | 173 | 107 | 6 | 59 | 225 | 361 | 521 | 6.53e-11 | 63.5 |
| MsG0680030328.01.T01 | MTR_5g009110 | 25.806 | 155 | 87 | 4 | 78 | 205 | 241 | 394 | 8.25e-11 | 63.2 |
| MsG0680030328.01.T01 | MTR_4g031820 | 27.746 | 173 | 107 | 6 | 59 | 225 | 339 | 499 | 8.33e-11 | 63.2 |
| MsG0680030328.01.T01 | MTR_5g009110 | 25.806 | 155 | 87 | 4 | 78 | 205 | 389 | 542 | 8.67e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030328.01.T01 | AT4G39480 | 49.714 | 175 | 87 | 1 | 51 | 224 | 331 | 505 | 6.52e-56 | 190 |
| MsG0680030328.01.T01 | AT4G39490 | 47.568 | 185 | 83 | 1 | 54 | 224 | 324 | 508 | 1.38e-55 | 189 |
| MsG0680030328.01.T01 | AT2G21910 | 51.412 | 177 | 82 | 3 | 49 | 224 | 325 | 498 | 9.15e-55 | 187 |
| MsG0680030328.01.T01 | AT2G23180 | 48.295 | 176 | 86 | 1 | 54 | 224 | 329 | 504 | 1.13e-54 | 187 |
| MsG0680030328.01.T01 | AT4G39500 | 47.701 | 174 | 86 | 3 | 54 | 224 | 287 | 458 | 1.17e-52 | 180 |
| MsG0680030328.01.T01 | AT1G47620 | 49.171 | 181 | 80 | 3 | 49 | 224 | 334 | 507 | 1.37e-52 | 181 |
| MsG0680030328.01.T01 | AT4G39500 | 47.701 | 174 | 86 | 3 | 54 | 224 | 337 | 508 | 4.32e-52 | 180 |
| MsG0680030328.01.T01 | AT4G32170 | 48.295 | 176 | 88 | 2 | 49 | 224 | 323 | 495 | 3.28e-51 | 177 |
| MsG0680030328.01.T01 | AT1G57750 | 46.023 | 176 | 85 | 2 | 49 | 224 | 323 | 488 | 1.48e-50 | 175 |
| MsG0680030328.01.T01 | AT4G39510 | 44.509 | 173 | 94 | 1 | 54 | 224 | 325 | 497 | 8.82e-49 | 171 |
| MsG0680030328.01.T01 | AT1G65340 | 43.353 | 173 | 92 | 2 | 54 | 224 | 327 | 495 | 1.72e-46 | 164 |
| MsG0680030328.01.T01 | AT5G02900 | 46.250 | 160 | 82 | 2 | 54 | 209 | 296 | 455 | 8.44e-46 | 162 |
| MsG0680030328.01.T01 | AT5G52320 | 43.353 | 173 | 92 | 2 | 54 | 224 | 326 | 494 | 1.25e-45 | 162 |
| MsG0680030328.01.T01 | AT5G52320 | 43.353 | 173 | 92 | 2 | 54 | 224 | 326 | 494 | 1.54e-45 | 162 |
| MsG0680030328.01.T01 | AT5G50130 | 65.179 | 112 | 39 | 0 | 221 | 332 | 40 | 151 | 2.99e-42 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 65.179 | 112 | 39 | 0 | 221 | 332 | 40 | 151 | 3.04e-42 | 147 |
| MsG0680030328.01.T01 | AT1G24540 | 43.575 | 179 | 96 | 3 | 49 | 224 | 336 | 512 | 5.66e-42 | 153 |
| MsG0680030328.01.T01 | AT5G50130 | 66.055 | 109 | 37 | 0 | 224 | 332 | 10 | 118 | 1.37e-41 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 66.055 | 109 | 37 | 0 | 224 | 332 | 10 | 118 | 1.41e-41 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 66.055 | 109 | 37 | 0 | 224 | 332 | 10 | 118 | 1.42e-41 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 66.055 | 109 | 37 | 0 | 224 | 332 | 10 | 118 | 1.50e-41 | 147 |
| MsG0680030328.01.T01 | AT5G58860 | 43.750 | 176 | 90 | 3 | 58 | 224 | 325 | 500 | 1.74e-41 | 151 |
| MsG0680030328.01.T01 | AT5G50130 | 65.179 | 112 | 39 | 0 | 221 | 332 | 40 | 151 | 1.77e-41 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 65.179 | 112 | 39 | 0 | 221 | 332 | 40 | 151 | 1.95e-41 | 147 |
| MsG0680030328.01.T01 | AT5G50130 | 65.179 | 112 | 39 | 0 | 221 | 332 | 40 | 151 | 2.13e-41 | 147 |
| MsG0680030328.01.T01 | AT1G13140 | 39.267 | 191 | 108 | 3 | 49 | 233 | 311 | 499 | 2.39e-41 | 151 |
| MsG0680030328.01.T01 | AT1G13140 | 39.267 | 191 | 108 | 3 | 49 | 233 | 337 | 525 | 3.60e-41 | 151 |
| MsG0680030328.01.T01 | AT1G01600 | 42.614 | 176 | 92 | 3 | 58 | 224 | 330 | 505 | 1.88e-40 | 149 |
| MsG0680030328.01.T01 | AT1G13150 | 42.857 | 182 | 96 | 3 | 49 | 224 | 330 | 509 | 3.26e-40 | 148 |
| MsG0680030328.01.T01 | AT4G00360 | 41.875 | 160 | 92 | 1 | 81 | 239 | 359 | 518 | 2.52e-39 | 146 |
| MsG0680030328.01.T01 | AT5G23190 | 39.572 | 187 | 98 | 5 | 49 | 224 | 350 | 532 | 3.60e-39 | 145 |
| MsG0680030328.01.T01 | AT3G26125 | 40.437 | 183 | 89 | 3 | 58 | 224 | 346 | 524 | 3.79e-39 | 145 |
| MsG0680030328.01.T01 | AT2G45970 | 41.989 | 181 | 86 | 4 | 58 | 224 | 327 | 502 | 6.63e-39 | 145 |
| MsG0680030328.01.T01 | AT1G34540 | 43.023 | 172 | 91 | 4 | 58 | 224 | 320 | 489 | 4.12e-37 | 139 |
| MsG0680030328.01.T01 | AT1G63710 | 39.011 | 182 | 99 | 2 | 54 | 224 | 319 | 499 | 1.01e-36 | 139 |
| MsG0680030328.01.T01 | AT3G56630 | 41.860 | 172 | 94 | 4 | 58 | 224 | 320 | 490 | 3.35e-36 | 137 |
| MsG0680030328.01.T01 | AT5G08250 | 38.824 | 170 | 98 | 4 | 60 | 224 | 302 | 470 | 4.20e-35 | 134 |
| MsG0680030328.01.T01 | AT5G08250 | 38.824 | 170 | 98 | 4 | 60 | 224 | 364 | 532 | 6.84e-35 | 134 |
| MsG0680030328.01.T01 | AT2G45510 | 37.430 | 179 | 102 | 4 | 57 | 227 | 326 | 502 | 5.92e-34 | 130 |
| MsG0680030328.01.T01 | AT5G63450 | 37.654 | 162 | 90 | 3 | 58 | 213 | 327 | 483 | 5.21e-33 | 128 |
| MsG0680030328.01.T01 | AT5G63450 | 37.654 | 162 | 90 | 3 | 58 | 213 | 385 | 541 | 1.06e-32 | 128 |
| MsG0680030328.01.T01 | AT2G44890 | 37.017 | 181 | 100 | 5 | 57 | 227 | 326 | 502 | 4.54e-32 | 125 |
| MsG0680030328.01.T01 | AT1G64590 | 55.455 | 110 | 49 | 0 | 221 | 330 | 38 | 147 | 2.44e-31 | 120 |
| MsG0680030328.01.T01 | AT3G48520 | 36.250 | 160 | 92 | 3 | 58 | 212 | 325 | 479 | 7.97e-31 | 122 |
| MsG0680030328.01.T01 | AT4G24050 | 51.351 | 111 | 54 | 0 | 224 | 334 | 41 | 151 | 1.38e-30 | 117 |
| MsG0680030328.01.T01 | AT2G27690 | 36.242 | 149 | 95 | 0 | 58 | 206 | 317 | 465 | 2.35e-30 | 120 |
| MsG0680030328.01.T01 | AT4G24050 | 50.000 | 120 | 59 | 1 | 215 | 334 | 33 | 151 | 3.43e-30 | 117 |
| MsG0680030328.01.T01 | AT1G69500 | 39.041 | 146 | 82 | 2 | 64 | 209 | 362 | 500 | 1.14e-28 | 116 |
| MsG0680030328.01.T01 | AT3G01900 | 33.333 | 165 | 103 | 2 | 54 | 211 | 305 | 469 | 2.88e-28 | 114 |
| MsG0680030328.01.T01 | AT2G44890 | 33.889 | 180 | 93 | 4 | 57 | 227 | 322 | 484 | 4.18e-27 | 111 |
| MsG0680030328.01.T01 | AT4G11410 | 47.368 | 114 | 60 | 0 | 221 | 334 | 33 | 146 | 6.56e-27 | 107 |
| MsG0680030328.01.T01 | AT1G57750 | 45.536 | 112 | 51 | 2 | 49 | 160 | 323 | 424 | 1.17e-26 | 109 |
| MsG0680030328.01.T01 | AT4G11410 | 47.368 | 114 | 60 | 0 | 221 | 334 | 33 | 146 | 1.91e-26 | 107 |
| MsG0680030328.01.T01 | AT4G23420 | 46.429 | 112 | 60 | 0 | 221 | 332 | 33 | 144 | 3.64e-25 | 102 |
| MsG0680030328.01.T01 | AT4G23420 | 46.429 | 112 | 60 | 0 | 221 | 332 | 33 | 144 | 3.65e-25 | 102 |
| MsG0680030328.01.T01 | AT4G23420 | 46.429 | 112 | 60 | 0 | 221 | 332 | 50 | 161 | 1.16e-24 | 102 |
| MsG0680030328.01.T01 | AT4G23420 | 46.429 | 112 | 60 | 0 | 221 | 332 | 33 | 144 | 1.18e-24 | 102 |
| MsG0680030328.01.T01 | AT4G23420 | 46.429 | 112 | 60 | 0 | 221 | 332 | 33 | 144 | 1.18e-24 | 102 |
| MsG0680030328.01.T01 | AT4G23430 | 44.643 | 112 | 62 | 0 | 221 | 332 | 33 | 144 | 6.31e-24 | 100 |
| MsG0680030328.01.T01 | AT4G23430 | 44.643 | 112 | 62 | 0 | 221 | 332 | 33 | 144 | 6.69e-24 | 100 |
| MsG0680030328.01.T01 | AT2G37540 | 46.491 | 114 | 61 | 0 | 221 | 334 | 37 | 150 | 8.65e-24 | 99.0 |
| MsG0680030328.01.T01 | AT2G37540 | 46.491 | 114 | 61 | 0 | 221 | 334 | 37 | 150 | 2.58e-23 | 98.6 |
| MsG0680030328.01.T01 | AT4G23430 | 43.636 | 110 | 62 | 0 | 221 | 330 | 33 | 142 | 2.99e-22 | 95.5 |
| MsG0680030328.01.T01 | AT4G23430 | 43.636 | 110 | 62 | 0 | 221 | 330 | 33 | 142 | 2.99e-22 | 95.5 |
| MsG0680030328.01.T01 | AT5G02540 | 44.660 | 103 | 57 | 0 | 232 | 334 | 48 | 150 | 5.06e-21 | 92.4 |
| MsG0680030328.01.T01 | AT5G38450 | 31.034 | 174 | 102 | 7 | 59 | 229 | 351 | 509 | 1.21e-15 | 78.2 |
| MsG0680030328.01.T01 | AT5G52400 | 30.233 | 172 | 108 | 5 | 59 | 229 | 352 | 512 | 8.19e-15 | 75.5 |
| MsG0680030328.01.T01 | AT3G53130 | 26.486 | 185 | 132 | 3 | 42 | 224 | 349 | 531 | 3.20e-14 | 73.9 |
| MsG0680030328.01.T01 | AT5G24900 | 33.083 | 133 | 83 | 4 | 94 | 224 | 274 | 402 | 1.44e-12 | 68.6 |
| MsG0680030328.01.T01 | AT5G24900 | 33.083 | 133 | 83 | 4 | 94 | 224 | 391 | 519 | 2.15e-12 | 68.2 |
| MsG0680030328.01.T01 | AT3G61040 | 27.700 | 213 | 126 | 9 | 3 | 211 | 282 | 470 | 2.31e-11 | 65.1 |
| MsG0680030328.01.T01 | AT4G09750 | 29.464 | 112 | 79 | 0 | 221 | 332 | 47 | 158 | 5.12e-11 | 63.2 |
| MsG0680030328.01.T01 | AT4G27440 | 26.974 | 152 | 102 | 4 | 183 | 330 | 57 | 203 | 6.25e-11 | 63.5 |
| MsG0680030328.01.T01 | AT4G27440 | 26.974 | 152 | 102 | 4 | 183 | 330 | 57 | 203 | 6.25e-11 | 63.5 |
| MsG0680030328.01.T01 | AT3G14630 | 28.931 | 159 | 93 | 7 | 59 | 210 | 396 | 541 | 6.73e-11 | 63.9 |
| MsG0680030328.01.T01 | AT1G64950 | 27.559 | 127 | 91 | 1 | 83 | 209 | 357 | 482 | 7.00e-11 | 63.5 |
| MsG0680030328.01.T01 | AT3G14630 | 28.916 | 166 | 94 | 8 | 52 | 210 | 338 | 486 | 7.43e-11 | 63.5 |
| MsG0680030328.01.T01 | AT5G53090 | 35.345 | 116 | 71 | 1 | 197 | 308 | 36 | 151 | 7.58e-11 | 63.2 |
| MsG0680030328.01.T01 | AT4G12310 | 27.044 | 159 | 112 | 2 | 64 | 222 | 346 | 500 | 8.96e-11 | 63.2 |
Find 53 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAGATTAAAGAAAATTT+TGG | 0.148197 | 6:-636184 | MsG0680030328.01.T01:CDS |
| GAGAGAAAGCAAGCAATTAA+AGG | 0.248200 | 6:-636055 | MsG0680030328.01.T01:CDS |
| TTGTATTAGGATTAACAATA+TGG | 0.260430 | 6:+636014 | None:intergenic |
| GACTTGGAAGGTGGTACTTA+TGG | 0.266128 | 6:-632195 | MsG0680030328.01.T01:intron |
| TGCTGGACCTAGAACTTGTT+TGG | 0.303612 | 6:-635852 | MsG0680030328.01.T01:CDS |
| TGGGGAGATTTGAAGAGATA+TGG | 0.308634 | 6:-635967 | MsG0680030328.01.T01:CDS |
| TGCTTTCTCTCAAAGGGTAT+TGG | 0.318382 | 6:+636067 | None:intergenic |
| TCCTTTCCCAAACAAGTTCT+AGG | 0.335209 | 6:+635845 | None:intergenic |
| GTGCTATATGTGAAGCTCTA+AGG | 0.366133 | 6:-636099 | MsG0680030328.01.T01:CDS |
| TGGTATATTCTCTCAAGTTT+TGG | 0.366970 | 6:-631818 | MsG0680030328.01.T01:CDS |
| ATTAATATTGAAAAGAAGTC+AGG | 0.373982 | 6:-636157 | MsG0680030328.01.T01:CDS |
| GATATGGGGAAAAGATTGTT+TGG | 0.376603 | 6:-635951 | MsG0680030328.01.T01:CDS |
| GCTGGACCTAGAACTTGTTT+GGG | 0.381694 | 6:-635851 | MsG0680030328.01.T01:CDS |
| TCAACACTGATTCGGAGAAA+TGG | 0.391552 | 6:-636586 | MsG0680030328.01.T01:CDS |
| GAAGGTGGTACTTATGGTAT+TGG | 0.395974 | 6:-632189 | MsG0680030328.01.T01:intron |
| GGGGAGATTTGAAGAGATAT+GGG | 0.397435 | 6:-635966 | MsG0680030328.01.T01:CDS |
| ACAATCGAATGGCTTAATAT+AGG | 0.425078 | 6:+635743 | None:intergenic |
| GACATTAGCCACAAATTACT+TGG | 0.428218 | 6:-631770 | MsG0680030328.01.T01:CDS |
| ATATAGTGCCTAAAAGTGTT+TGG | 0.429724 | 6:-636541 | MsG0680030328.01.T01:CDS |
| ATTGTACTTCTCATAAAGAA+TGG | 0.436748 | 6:-635725 | MsG0680030328.01.T01:intron |
| AACAGAATAACCTCAGCATC+TGG | 0.451457 | 6:+632060 | None:intergenic |
| TGGAATATTCAACACTGATT+CGG | 0.459898 | 6:-636594 | MsG0680030328.01.T01:CDS |
| AAATGTACCCAAGTAATTTG+TGG | 0.460041 | 6:+631762 | None:intergenic |
| TTTCTCTCAAAGGGTATTGG+AGG | 0.464054 | 6:+636070 | None:intergenic |
| CTTTCAGATATCCACCTCTC+TGG | 0.469445 | 6:+635920 | None:intergenic |
| GAACATGACCATCCACTACT+TGG | 0.470328 | 6:+635765 | None:intergenic |
| ATTGCTTGCTTTCTCTCAAA+GGG | 0.475212 | 6:+636061 | None:intergenic |
| AATTGCTTGCTTTCTCTCAA+AGG | 0.492373 | 6:+636060 | None:intergenic |
| AAGTTCATTAGTTATAATGC+TGG | 0.493549 | 6:-635869 | MsG0680030328.01.T01:CDS |
| ACTTACATTAGAATATTAAG+TGG | 0.495604 | 6:+631970 | None:intergenic |
| AGATGCTGAGGTTATTCTGT+TGG | 0.512654 | 6:-632058 | MsG0680030328.01.T01:CDS |
| AGTGGAAGCTAAGATTCTTG+AGG | 0.538509 | 6:-636203 | MsG0680030328.01.T01:CDS |
| TAACTAATGAACTTGTAAGA+TGG | 0.556032 | 6:+635878 | None:intergenic |
| TTAATATTGAAAAGAAGTCA+GGG | 0.556409 | 6:-636156 | MsG0680030328.01.T01:CDS |
| AGAGGAGTGAGAATTGTGAT+TGG | 0.559022 | 6:-632138 | MsG0680030328.01.T01:CDS |
| ACCTAGAACTTGTTTGGGAA+AGG | 0.559793 | 6:-635846 | MsG0680030328.01.T01:CDS |
| GTTGAATATTCCATCTCCAA+AGG | 0.568260 | 6:+636604 | None:intergenic |
| TTATGAGAAGTACAATCGAA+TGG | 0.575201 | 6:+635732 | None:intergenic |
| GGATTAACAATATGGCCACT+TGG | 0.580425 | 6:+636022 | None:intergenic |
| GAGAATTGTGATTGGTGCAT+GGG | 0.584337 | 6:-632130 | MsG0680030328.01.T01:CDS |
| GAGAGGTGGATATCTGAAAG+AGG | 0.586162 | 6:-635917 | MsG0680030328.01.T01:CDS |
| TGGTGCATGGGACTTGAAGA+AGG | 0.595845 | 6:-632118 | MsG0680030328.01.T01:CDS |
| TGAGAATTGTGATTGGTGCA+TGG | 0.596090 | 6:-632131 | MsG0680030328.01.T01:CDS |
| ACATTAGCCACAAATTACTT+GGG | 0.596132 | 6:-631769 | MsG0680030328.01.T01:CDS |
| CAAATATTGTGTCCAAGTAG+TGG | 0.596917 | 6:-635777 | MsG0680030328.01.T01:CDS |
| TATTGTGTCCAAGTAGTGGA+TGG | 0.615735 | 6:-635773 | MsG0680030328.01.T01:CDS |
| AAAAGAGAGTCCAGATGCTG+AGG | 0.617294 | 6:-632070 | MsG0680030328.01.T01:CDS |
| GCTAGAGTGTTAGCAAAGAG+AGG | 0.622747 | 6:-632156 | MsG0680030328.01.T01:CDS |
| TGGAGTTCAAGCCAGAGAGG+TGG | 0.631026 | 6:-635931 | MsG0680030328.01.T01:CDS |
| GTTTGGAGTTCAAGCCAGAG+AGG | 0.649327 | 6:-635934 | MsG0680030328.01.T01:CDS |
| GGGAGATTTGAAGAGATATG+GGG | 0.657198 | 6:-635965 | MsG0680030328.01.T01:CDS |
| AGGTGGATATCTGAAAGAGG+AGG | 0.661120 | 6:-635914 | MsG0680030328.01.T01:CDS |
| AAAGGTGATATACTTCCAAG+TGG | 0.704090 | 6:-636037 | MsG0680030328.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGTATTATTGTATT+AGG | + | Chr6:632411-632430 | None:intergenic | 10.0% |
| !! | ATAGAACAAATATATTAATT+TGG | - | Chr6:633001-633020 | MsG0680030328.01.T01:intron | 10.0% |
| !! | ATATTAAATATTCATAGTAA+AGG | + | Chr6:632913-632932 | None:intergenic | 10.0% |
| !!! | CTTGTTTTTTATTTTATTTA+TGG | - | Chr6:632846-632865 | MsG0680030328.01.T01:intron | 10.0% |
| !!! | TATTTAATATATTAATTTGG+TGG | - | Chr6:632923-632942 | MsG0680030328.01.T01:intron | 10.0% |
| !! | ACAAATATTATAAAAATGTG+TGG | + | Chr6:633344-633363 | None:intergenic | 15.0% |
| !! | ACTATTATGTGATTAATATT+TGG | + | Chr6:633764-633783 | None:intergenic | 15.0% |
| !! | ATAGAAAATTGAGATTTAAA+TGG | - | Chr6:633566-633585 | MsG0680030328.01.T01:intron | 15.0% |
| !! | ATCTAAATATCTCTATATAA+CGG | - | Chr6:634410-634429 | MsG0680030328.01.T01:intron | 15.0% |
| !! | ATCTAAATATCTCTATTTAA+TGG | - | Chr6:633401-633420 | MsG0680030328.01.T01:intron | 15.0% |
| !! | CAAATGAAAAAATAAGTTAT+TGG | - | Chr6:632886-632905 | MsG0680030328.01.T01:intron | 15.0% |
| !! | TAATAACTAAAAATTAACTG+AGG | + | Chr6:634279-634298 | None:intergenic | 15.0% |
| !!! | ACACATTTTTATAATATTTG+CGG | - | Chr6:633343-633362 | MsG0680030328.01.T01:intron | 15.0% |
| !!! | ACACATTTTTATAATATTTG+TGG | - | Chr6:633343-633362 | MsG0680030328.01.T01:intron | 15.0% |
| !!! | TATTTTGATAACTATGTAAA+GGG | - | Chr6:631756-631775 | MsG0680030328.01.T01:CDS | 15.0% |
| !! | AAGAAAATGTAGCAAAAATA+TGG | - | Chr6:631998-632017 | MsG0680030328.01.T01:CDS | 20.0% |
| !! | AATAGCATAGTGAAATAAAA+TGG | - | Chr6:636499-636518 | MsG0680030328.01.T01:intron | 20.0% |
| !! | ACTGTTATGTGATTAATATT+TGG | + | Chr6:634775-634794 | None:intergenic | 20.0% |
| !! | ACTTACATTAGAATATTAAG+TGG | + | Chr6:636442-636461 | None:intergenic | 20.0% |
| !! | ATAGCATAGTGAAATAAAAT+GGG | - | Chr6:636500-636519 | MsG0680030328.01.T01:intron | 20.0% |
| !! | ATATTATAAAAATGTGTGCA+TGG | + | Chr6:634349-634368 | None:intergenic | 20.0% |
| !! | ATATTATAAAAATGTGTGGA+TGG | + | Chr6:633340-633359 | None:intergenic | 20.0% |
| !! | ATCTCTGTATTTATATATCT+CGG | - | Chr6:634895-634914 | MsG0680030328.01.T01:intron | 20.0% |
| !! | ATCTTTGTGTTTATATATCT+CGG | - | Chr6:633884-633903 | MsG0680030328.01.T01:intron | 20.0% |
| !! | ATGTTTGTCAAAAAAAAACT+AGG | + | Chr6:635594-635613 | None:intergenic | 20.0% |
| !! | ATTAATATTGAAAAGAAGTC+AGG | - | Chr6:632252-632271 | MsG0680030328.01.T01:intron | 20.0% |
| !! | TAACAAAAAGAGAAATTTGA+TGG | - | Chr6:632721-632740 | MsG0680030328.01.T01:intron | 20.0% |
| !! | TAGTTTAAATATACGATTGT+GGG | + | Chr6:634871-634890 | None:intergenic | 20.0% |
| !! | TCAAAAAGAAAAAAAGACAA+TGG | + | Chr6:632951-632970 | None:intergenic | 20.0% |
| !! | TGTTTGTCAAAAAAAAACTA+GGG | + | Chr6:635593-635612 | None:intergenic | 20.0% |
| !! | TTAATATTGAAAAGAAGTCA+GGG | - | Chr6:632253-632272 | MsG0680030328.01.T01:intron | 20.0% |
| !! | TTGTATTAGGATTAACAATA+TGG | + | Chr6:632398-632417 | None:intergenic | 20.0% |
| !!! | ACTATTTTTCTTGTATTCAA+TGG | - | Chr6:632422-632441 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | ACTTATTTTTTCATTTGAGA+AGG | + | Chr6:632883-632902 | None:intergenic | 20.0% |
| !!! | AGGAGATTAAAGAAAATTTT+GGG | - | Chr6:632226-632245 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | ATAAATCATTAATCCTTTTG+CGG | - | Chr6:635265-635284 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | ATTATTGTTGATTTTTGACT+TGG | - | Chr6:636198-636217 | MsG0680030328.01.T01:CDS | 20.0% |
| !!! | CCAATTATTTTTCAACAAAT+AGG | - | Chr6:635337-635356 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | CCTATTTGTTGAAAAATAAT+TGG | + | Chr6:635340-635359 | None:intergenic | 20.0% |
| !!! | CTATTTTTCTTGTATTCAAT+GGG | - | Chr6:632423-632442 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | GAACAAATATATTAATTTGG+TGG | - | Chr6:633004-633023 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | GTATTTTGATAACTATGTAA+AGG | - | Chr6:631755-631774 | MsG0680030328.01.T01:CDS | 20.0% |
| !!! | TATTTTTCTTGTATTCAATG+GGG | - | Chr6:632424-632443 | MsG0680030328.01.T01:intron | 20.0% |
| !!! | TGACTTCTTTTCAATATTAA+TGG | + | Chr6:632253-632272 | None:intergenic | 20.0% |
| !!! | TTTTATGATATGTACAGTAA+TGG | - | Chr6:636537-636556 | MsG0680030328.01.T01:CDS | 20.0% |
| ! | AAATATAGAGTCTAGAAGAA+AGG | - | Chr6:631971-631990 | MsG0680030328.01.T01:intron | 25.0% |
| ! | AAGTTCATTAGTTATAATGC+TGG | - | Chr6:632540-632559 | MsG0680030328.01.T01:intron | 25.0% |
| ! | ACTGCTCAAAAAATAAATAG+AGG | - | Chr6:634970-634989 | MsG0680030328.01.T01:intron | 25.0% |
| ! | AGTACCATCAATGAAAAAAA+TGG | + | Chr6:635647-635666 | None:intergenic | 25.0% |
| ! | AGTTATGTAGTGTTAATACA+TGG | + | Chr6:633174-633193 | None:intergenic | 25.0% |
| ! | ATATATAATAGTACCGCAAA+AGG | + | Chr6:635281-635300 | None:intergenic | 25.0% |
| ! | ATGTAGCAAAAATATGGAAA+TGG | - | Chr6:632004-632023 | MsG0680030328.01.T01:CDS | 25.0% |
| ! | ATGTTGAAGTAAAAAACATG+TGG | - | Chr6:635379-635398 | MsG0680030328.01.T01:intron | 25.0% |
| ! | ATTATTAAAAAACACACCCT+AGG | + | Chr6:635418-635437 | None:intergenic | 25.0% |
| ! | ATTCCTCAAAAGAATAAAAC+CGG | - | Chr6:635494-635513 | MsG0680030328.01.T01:intron | 25.0% |
| ! | ATTCTACGCATTAGAAAATT+TGG | - | Chr6:634232-634251 | MsG0680030328.01.T01:intron | 25.0% |
| ! | ATTGTACTTCTCATAAAGAA+TGG | - | Chr6:632684-632703 | MsG0680030328.01.T01:intron | 25.0% |
| ! | ATTTAAATGGTTTACAAGGT+AGG | - | Chr6:633579-633598 | MsG0680030328.01.T01:intron | 25.0% |
| ! | CAAAATTATACCAAGAGTTT+GGG | + | Chr6:633122-633141 | None:intergenic | 25.0% |
| ! | CAACAAGAGACAATTAATAA+TGG | + | Chr6:632772-632791 | None:intergenic | 25.0% |
| ! | CTAGTTTAAATATACGATTG+TGG | + | Chr6:634872-634891 | None:intergenic | 25.0% |
| ! | CTGCTCAAAAAATAAATAGA+GGG | - | Chr6:634971-634990 | MsG0680030328.01.T01:intron | 25.0% |
| ! | GTAACTAAATTCCCTATAAA+TGG | + | Chr6:635316-635335 | None:intergenic | 25.0% |
| ! | TAACTAATGAACTTGTAAGA+TGG | + | Chr6:632534-632553 | None:intergenic | 25.0% |
| ! | TAGTCTAAATATACGATTGT+GGG | + | Chr6:633860-633879 | None:intergenic | 25.0% |
| ! | TGAGATTTAAATGGTTTACA+AGG | - | Chr6:633575-633594 | MsG0680030328.01.T01:intron | 25.0% |
| ! | TTAATGATAGGTTCTTTCTA+GGG | - | Chr6:634921-634940 | MsG0680030328.01.T01:intron | 25.0% |
| ! | TTATGTTAGGACTTATTGTA+TGG | + | Chr6:635134-635153 | None:intergenic | 25.0% |
| ! | TTCTAAGTAACGTGTTAAAT+GGG | + | Chr6:633739-633758 | None:intergenic | 25.0% |
| ! | TTGGAAGAAAAAAAAACACA+AGG | + | Chr6:635905-635924 | None:intergenic | 25.0% |
| ! | TTTAAATACCACTAAGTGTA+GGG | + | Chr6:634006-634025 | None:intergenic | 25.0% |
| ! | TTTAATGATAGGTTCTTTCT+AGG | - | Chr6:634920-634939 | MsG0680030328.01.T01:intron | 25.0% |
| !! | AAAAAGCTAGTTTATCTTCA+TGG | - | Chr6:632288-632307 | MsG0680030328.01.T01:intron | 25.0% |
| !! | AAATTTTACAGAAACAATGC+TGG | - | Chr6:636571-636590 | MsG0680030328.01.T01:CDS | 25.0% |
| !! | AGTGCCCAATTTATTTATTT+TGG | - | Chr6:635446-635465 | MsG0680030328.01.T01:intron | 25.0% |
| !! | CATTTTTCACCATATAACAA+AGG | + | Chr6:635974-635993 | None:intergenic | 25.0% |
| !! | CTTTGTTATATGGTGAAAAA+TGG | - | Chr6:635972-635991 | MsG0680030328.01.T01:CDS | 25.0% |
| !! | GAGACTTTTTGAATTAAGTA+TGG | - | Chr6:633224-633243 | MsG0680030328.01.T01:intron | 25.0% |
| !! | GAGGAGATTAAAGAAAATTT+TGG | - | Chr6:632225-632244 | MsG0680030328.01.T01:intron | 25.0% |
| !! | TAGTTGCAACAAAACTTTTA+TGG | + | Chr6:633810-633829 | None:intergenic | 25.0% |
| !! | TTACTTGTTTGAGTTTGATT+GGG | - | Chr6:634177-634196 | MsG0680030328.01.T01:intron | 25.0% |
| !! | TTTTAAATACCACTAAGTGT+AGG | + | Chr6:634007-634026 | None:intergenic | 25.0% |
| !!! | ATATCTCGGATTTTAATGAT+AGG | - | Chr6:634909-634928 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | GTGCCCAATTTATTTATTTT+GGG | - | Chr6:635447-635466 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | TATTTTTCAACAAATAGGCA+AGG | - | Chr6:635342-635361 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | TGAAAGAAAGTGTTTTTTGA+AGG | - | Chr6:634513-634532 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | TGCCCAATTTATTTATTTTG+GGG | - | Chr6:635448-635467 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | TTGAAAGAAAGTGTTTTTGA+AGG | - | Chr6:633507-633526 | MsG0680030328.01.T01:intron | 25.0% |
| !!! | TTTTGACTCAAGTGTTTTAT+TGG | - | Chr6:632965-632984 | MsG0680030328.01.T01:intron | 25.0% |
| AAATGTACCCAAGTAATTTG+TGG | + | Chr6:636650-636669 | None:intergenic | 30.0% | |
| AAGTCCAAAGTTATATCAGA+TGG | - | Chr6:635618-635637 | MsG0680030328.01.T01:intron | 30.0% | |
| AATCCGGAAACTTCAAAAAT+AGG | - | Chr6:636020-636039 | MsG0680030328.01.T01:CDS | 30.0% | |
| ACAATCGAATGGCTTAATAT+AGG | + | Chr6:632669-632688 | None:intergenic | 30.0% | |
| ACATTAGCCACAAATTACTT+GGG | - | Chr6:636640-636659 | MsG0680030328.01.T01:CDS | 30.0% | |
| ACGAGTACTCTAAATAAATC+TGG | - | Chr6:633090-633109 | MsG0680030328.01.T01:intron | 30.0% | |
| ACTGCTCAGAAAATAAATAG+AGG | - | Chr6:633959-633978 | MsG0680030328.01.T01:intron | 30.0% | |
| AGTCCAAAGTTATATCAGAT+GGG | - | Chr6:635619-635638 | MsG0680030328.01.T01:intron | 30.0% | |
| ATATCTCGGATTTCAATGAT+AGG | - | Chr6:633898-633917 | MsG0680030328.01.T01:intron | 30.0% | |
| ATCAAATACTTTGCATGCTT+TGG | + | Chr6:631937-631956 | None:intergenic | 30.0% | |
| ATCCGGAAACTTCAAAAATA+GGG | - | Chr6:636021-636040 | MsG0680030328.01.T01:CDS | 30.0% | |
| CTAGTCTAAATATACGATTG+TGG | + | Chr6:633861-633880 | None:intergenic | 30.0% | |
| CTGCTCAGAAAATAAATAGA+GGG | - | Chr6:633960-633979 | MsG0680030328.01.T01:intron | 30.0% | |
| GCAAAATTATACCAAGAGTT+TGG | + | Chr6:633123-633142 | None:intergenic | 30.0% | |
| GGCCCCAAAATAAATAAATT+GGG | + | Chr6:635453-635472 | None:intergenic | 30.0% | |
| GTGTTAAATGGGAAATTAGA+GGG | + | Chr6:634739-634758 | None:intergenic | 30.0% | |
| GTTATAATCATTGAGCCATT+TGG | + | Chr6:633686-633705 | None:intergenic | 30.0% | |
| TAAAGAATGGTTTGAAGGTT+AGG | - | Chr6:632697-632716 | MsG0680030328.01.T01:intron | 30.0% | |
| TATGAATACTAACTAGCTAG+AGG | - | Chr6:633604-633623 | MsG0680030328.01.T01:intron | 30.0% | |
| TATGGTGAAAAATGGAGTTA+CGG | - | Chr6:635980-635999 | MsG0680030328.01.T01:CDS | 30.0% | |
| TCAATGATAGGTTCTTTCTA+AGG | - | Chr6:633910-633929 | MsG0680030328.01.T01:intron | 30.0% | |
| TCTCATAAAGAATGGTTTGA+AGG | - | Chr6:632692-632711 | MsG0680030328.01.T01:intron | 30.0% | |
| TTACTTCAACATTATCGACA+GGG | + | Chr6:635542-635561 | None:intergenic | 30.0% | |
| TTATGTTAGGGCATATTGTA+CGG | + | Chr6:634124-634143 | None:intergenic | 30.0% | |
| TTCCTCAAAAGAATAAAACC+GGG | - | Chr6:635495-635514 | MsG0680030328.01.T01:intron | 30.0% | |
| TTCTGAACATGTTTGTAACA+TGG | - | Chr6:636155-636174 | MsG0680030328.01.T01:CDS | 30.0% | |
| TTGCAAAAATGGCTTCAAAT+TGG | - | Chr6:631894-631913 | MsG0680030328.01.T01:intron | 30.0% | |
| TTTACTTCAACATTATCGAC+AGG | + | Chr6:635543-635562 | None:intergenic | 30.0% | |
| ! | ATAAGAAGTGTGGTCAATAT+TGG | - | Chr6:635150-635169 | MsG0680030328.01.T01:intron | 30.0% |
| ! | CATTCAATCTTTTTGTAGCT+GGG | - | Chr6:632124-632143 | MsG0680030328.01.T01:CDS | 30.0% |
| ! | CTCTTCTTTTGATGTCAAAA+TGG | + | Chr6:633377-633396 | None:intergenic | 30.0% |
| ! | GGTTAACAACTTTTAAACGT+TGG | + | Chr6:633789-633808 | None:intergenic | 30.0% |
| ! | GTTACTTGTTTGAGTTTGAT+TGG | - | Chr6:634176-634195 | MsG0680030328.01.T01:intron | 30.0% |
| ! | GTTCTAAGTAACGTGTTAAA+TGG | + | Chr6:633740-633759 | None:intergenic | 30.0% |
| ! | TACTGAAATGTCACCATTTT+TGG | - | Chr6:635663-635682 | MsG0680030328.01.T01:intron | 30.0% |
| ! | TGGAATATTCAACACTGATT+CGG | - | Chr6:631815-631834 | MsG0680030328.01.T01:CDS | 30.0% |
| ! | TGGTATATTCTCTCAAGTTT+TGG | - | Chr6:636591-636610 | MsG0680030328.01.T01:CDS | 30.0% |
| ! | TTATGAGAAGTACAATCGAA+TGG | + | Chr6:632680-632699 | None:intergenic | 30.0% |
| ! | TTTTTCCGGATTTTGTAATC+CGG | - | Chr6:636004-636023 | MsG0680030328.01.T01:CDS | 30.0% |
| !! | ACGCTTTAATTTTCATCAAC+TGG | + | Chr6:633151-633170 | None:intergenic | 30.0% |
| !! | AGTTGTTGACTCCATTTATA+GGG | - | Chr6:635302-635321 | MsG0680030328.01.T01:intron | 30.0% |
| !! | ATATAGTGCCTAAAAGTGTT+TGG | - | Chr6:631868-631887 | MsG0680030328.01.T01:intron | 30.0% |
| !! | ATGGAAAAAAAGGGTGTTTA+GGG | + | Chr6:636087-636106 | None:intergenic | 30.0% |
| !! | TGGTGTTTTCCTTTGTTATA+TGG | - | Chr6:635962-635981 | MsG0680030328.01.T01:CDS | 30.0% |
| !!! | GGATCCATTTTTTTCATTGA+TGG | - | Chr6:635640-635659 | MsG0680030328.01.T01:intron | 30.0% |
| !!! | TTGTTGATTTTTGACTTGGA+AGG | - | Chr6:636202-636221 | MsG0680030328.01.T01:CDS | 30.0% |
| AAAAATGTCCTTGAGGTTTC+CGG | - | Chr6:635923-635942 | MsG0680030328.01.T01:CDS | 35.0% | |
| AAAGGTGATATACTTCCAAG+TGG | - | Chr6:632372-632391 | MsG0680030328.01.T01:intron | 35.0% | |
| AAATGGGAAATTAGAGGGTT+AGG | + | Chr6:634734-634753 | None:intergenic | 35.0% | |
| AAATGGTTTACAAGGTACGT+AGG | - | Chr6:634590-634609 | MsG0680030328.01.T01:intron | 35.0% | |
| AACAAAGGAAAACACCATTC+CGG | + | Chr6:635959-635978 | None:intergenic | 35.0% | |
| AACATGTTCAGAATTACTGC+TGG | + | Chr6:636148-636167 | None:intergenic | 35.0% | |
| AACTTTGGACTTGCCAAAAA+TGG | + | Chr6:635679-635698 | None:intergenic | 35.0% | |
| AAGTCCTAACATAAGAAGTG+TGG | - | Chr6:635140-635159 | MsG0680030328.01.T01:intron | 35.0% | |
| AATTGCTTGCTTTCTCTCAA+AGG | + | Chr6:632352-632371 | None:intergenic | 35.0% | |
| ACGTGTTAAATGGGAATTAG+AGG | + | Chr6:633730-633749 | None:intergenic | 35.0% | |
| AGAATCTTAGCTTCCACTAA+AGG | + | Chr6:632204-632223 | None:intergenic | 35.0% | |
| AGTGTAGGTAAAAGCAGAAT+AGG | + | Chr6:635002-635021 | None:intergenic | 35.0% | |
| AGTTTCCGGATTACAAAATC+CGG | + | Chr6:636012-636031 | None:intergenic | 35.0% | |
| ATTGCTTGCTTTCTCTCAAA+GGG | + | Chr6:632351-632370 | None:intergenic | 35.0% | |
| CAAATATTGTGTCCAAGTAG+TGG | - | Chr6:632632-632651 | MsG0680030328.01.T01:intron | 35.0% | |
| CAAGAATAGGCAAACGAAAT+AGG | - | Chr6:633653-633672 | MsG0680030328.01.T01:intron | 35.0% | |
| CATGTGGCATATACTCATAT+TGG | - | Chr6:635566-635585 | MsG0680030328.01.T01:intron | 35.0% | |
| CGTGTTAAATGGGAAATTAG+AGG | + | Chr6:634740-634759 | None:intergenic | 35.0% | |
| CGTGTTAAATGGGAATTAGA+GGG | + | Chr6:633729-633748 | None:intergenic | 35.0% | |
| CTATTTCGTTTGCCTATTCT+TGG | + | Chr6:633655-633674 | None:intergenic | 35.0% | |
| GAATCTTAGCTTCCACTAAA+GGG | + | Chr6:632203-632222 | None:intergenic | 35.0% | |
| GAATCTTATAGGATGGGAAA+CGG | + | Chr6:635875-635894 | None:intergenic | 35.0% | |
| GACATTAGCCACAAATTACT+TGG | - | Chr6:636639-636658 | MsG0680030328.01.T01:CDS | 35.0% | |
| GAGAGAAAGCAAGCAATTAA+AGG | - | Chr6:632354-632373 | MsG0680030328.01.T01:intron | 35.0% | |
| GATATGGGGAAAAGATTGTT+TGG | - | Chr6:632458-632477 | MsG0680030328.01.T01:intron | 35.0% | |
| GATCCCATCTGATATAACTT+TGG | + | Chr6:635625-635644 | None:intergenic | 35.0% | |
| GATTCGGAGAAATGGAAAAA+TGG | - | Chr6:631831-631850 | MsG0680030328.01.T01:intron | 35.0% | |
| GGGCCCCAAAATAAATAAAT+TGG | + | Chr6:635454-635473 | None:intergenic | 35.0% | |
| GTGTTTGGAAGTTGCAAAAA+TGG | - | Chr6:631883-631902 | MsG0680030328.01.T01:intron | 35.0% | |
| GTTGAATATTCCATCTCCAA+AGG | + | Chr6:631808-631827 | None:intergenic | 35.0% | |
| TGCAACAAGACAAACAACTT+TGG | + | Chr6:635694-635713 | None:intergenic | 35.0% | |
| TGGCATATACTCATTACCTA+GGG | - | Chr6:635399-635418 | MsG0680030328.01.T01:intron | 35.0% | |
| TTCTTCATTCCACCAAGAAT+AGG | - | Chr6:633640-633659 | MsG0680030328.01.T01:intron | 35.0% | |
| TTCTTCCAAAAATGTCCTTG+AGG | - | Chr6:635916-635935 | MsG0680030328.01.T01:CDS | 35.0% | |
| TTGACCACACTTCTTATGTT+AGG | + | Chr6:635147-635166 | None:intergenic | 35.0% | |
| ! | AATGGAGTTACGGATTTTTC+CGG | - | Chr6:635990-636009 | MsG0680030328.01.T01:CDS | 35.0% |
| ! | GCATTCAATCTTTTTGTAGC+TGG | - | Chr6:632123-632142 | MsG0680030328.01.T01:CDS | 35.0% |
| ! | TGCAACTTCCAAACACTTTT+AGG | + | Chr6:631879-631898 | None:intergenic | 35.0% |
| !! | AATTTGGTGTGTGAAGAATG+TGG | - | Chr6:634248-634267 | MsG0680030328.01.T01:intron | 35.0% |
| !! | AGTTTGTTGCTTGTTTGAGT+TGG | - | Chr6:635181-635200 | MsG0680030328.01.T01:intron | 35.0% |
| !! | CATGGAAAAAAAGGGTGTTT+AGG | + | Chr6:636088-636107 | None:intergenic | 35.0% |
| !! | GAGTTGTTGACTCCATTTAT+AGG | - | Chr6:635301-635320 | MsG0680030328.01.T01:intron | 35.0% |
| !! | GTCTCTTGTTGTTTGTGTTT+GGG | - | Chr6:632781-632800 | MsG0680030328.01.T01:intron | 35.0% |
| !! | TGGAAAAAAAGGGTGTTTAG+GGG | + | Chr6:636086-636105 | None:intergenic | 35.0% |
| !! | TGTCTCTTGTTGTTTGTGTT+TGG | - | Chr6:632780-632799 | MsG0680030328.01.T01:intron | 35.0% |
| !!! | ATTTTTGAAGCCTTTGGAGA+TGG | - | Chr6:631795-631814 | MsG0680030328.01.T01:CDS | 35.0% |
| !!! | CATGAGATTTTTGAAGCCTT+TGG | - | Chr6:631789-631808 | MsG0680030328.01.T01:CDS | 35.0% |
| !!! | CTAAACACCCTTTTTTTCCA+TGG | - | Chr6:636086-636105 | MsG0680030328.01.T01:CDS | 35.0% |
| !!! | TTGATTTTTGACTTGGAAGG+TGG | - | Chr6:636205-636224 | MsG0680030328.01.T01:intron | 35.0% |
| AAATGGGAATTAGAGGGCTA+GGG | + | Chr6:633723-633742 | None:intergenic | 40.0% | |
| AACAGAATAACCTCAGCATC+TGG | + | Chr6:636352-636371 | None:intergenic | 40.0% | |
| ACCAGCACCATGGAAAAAAA+GGG | + | Chr6:636096-636115 | None:intergenic | 40.0% | |
| ACGACAACAAATTGCATGCA+TGG | + | Chr6:634061-634080 | None:intergenic | 40.0% | |
| AGAGGAGTGAGAATTGTGAT+TGG | - | Chr6:636271-636290 | MsG0680030328.01.T01:intron | 40.0% | |
| AGATGCTGAGGTTATTCTGT+TGG | - | Chr6:636351-636370 | MsG0680030328.01.T01:intron | 40.0% | |
| AGTGGAAGCTAAGATTCTTG+AGG | - | Chr6:632206-632225 | MsG0680030328.01.T01:intron | 40.0% | |
| CCATTCCGGATTATGAAATC+CGG | + | Chr6:635945-635964 | None:intergenic | 40.0% | |
| CGACGACACTTCTTATGTTA+GGG | + | Chr6:634136-634155 | None:intergenic | 40.0% | |
| GAAATAGGCTTCGAACCAAA+TGG | - | Chr6:633668-633687 | MsG0680030328.01.T01:intron | 40.0% | |
| GAAGGTGGTACTTATGGTAT+TGG | - | Chr6:636220-636239 | MsG0680030328.01.T01:intron | 40.0% | |
| GAGAATTGTGATTGGTGCAT+GGG | - | Chr6:636279-636298 | MsG0680030328.01.T01:intron | 40.0% | |
| GCGTGAGAATCTTATAGGAT+GGG | + | Chr6:635881-635900 | None:intergenic | 40.0% | |
| GGATTAACAATATGGCCACT+TGG | + | Chr6:632390-632409 | None:intergenic | 40.0% | |
| GGGAGATTTGAAGAGATATG+GGG | - | Chr6:632444-632463 | MsG0680030328.01.T01:intron | 40.0% | |
| GGGGAGATTTGAAGAGATAT+GGG | - | Chr6:632443-632462 | MsG0680030328.01.T01:intron | 40.0% | |
| GGTGTTCGGATTATGTAATC+CGG | + | Chr6:636064-636083 | None:intergenic | 40.0% | |
| GGTTTCCGGATTTCATAATC+CGG | - | Chr6:635937-635956 | MsG0680030328.01.T01:CDS | 40.0% | |
| GTGCTATATGTGAAGCTCTA+AGG | - | Chr6:632310-632329 | MsG0680030328.01.T01:intron | 40.0% | |
| GTGGCATATACTCATTACCT+AGG | - | Chr6:635398-635417 | MsG0680030328.01.T01:intron | 40.0% | |
| GTGTAGGGTAAAAGCAGAAT+AGG | + | Chr6:633991-634010 | None:intergenic | 40.0% | |
| TAAATGGGAATTAGAGGGCT+AGG | + | Chr6:633724-633743 | None:intergenic | 40.0% | |
| TATGAAATCCGGAAACCTCA+AGG | + | Chr6:635934-635953 | None:intergenic | 40.0% | |
| TATTGCTACACACCCTTTAG+TGG | - | Chr6:632188-632207 | MsG0680030328.01.T01:CDS | 40.0% | |
| TCCTTTCCCAAACAAGTTCT+AGG | + | Chr6:632567-632586 | None:intergenic | 40.0% | |
| TCGACGACACTTCTTATGTT+AGG | + | Chr6:634137-634156 | None:intergenic | 40.0% | |
| TGAGAATTGTGATTGGTGCA+TGG | - | Chr6:636278-636297 | MsG0680030328.01.T01:intron | 40.0% | |
| TGGGGAGATTTGAAGAGATA+TGG | - | Chr6:632442-632461 | MsG0680030328.01.T01:intron | 40.0% | |
| TTTCGTTTGCCTATTCTTGG+TGG | + | Chr6:633652-633671 | None:intergenic | 40.0% | |
| ! | ACCTAGAACTTGTTTGGGAA+AGG | - | Chr6:632563-632582 | MsG0680030328.01.T01:intron | 40.0% |
| ! | CTTGTTTGAGTTTGATTGGG+AGG | - | Chr6:634180-634199 | MsG0680030328.01.T01:intron | 40.0% |
| ! | GGAAACCTCAAGGACATTTT+TGG | + | Chr6:635924-635943 | None:intergenic | 40.0% |
| ! | GGGTTAGGCTTGTTTATGAA+AGG | + | Chr6:634719-634738 | None:intergenic | 40.0% |
| ! | TATTGTGTCCAAGTAGTGGA+TGG | - | Chr6:632636-632655 | MsG0680030328.01.T01:intron | 40.0% |
| ! | TGCTTTCTCTCAAAGGGTAT+TGG | + | Chr6:632345-632364 | None:intergenic | 40.0% |
| ! | TGCTTTTACCCTACACTTAG+TGG | - | Chr6:633995-634014 | MsG0680030328.01.T01:intron | 40.0% |
| !! | CTGCTTTTACCTACACTTAG+TGG | - | Chr6:635005-635024 | MsG0680030328.01.T01:intron | 40.0% |
| !! | CTTGTTTGAGTTGGATTGAG+AGG | - | Chr6:635190-635209 | MsG0680030328.01.T01:intron | 40.0% |
| !! | GGAAAAAAAGGGTGTTTAGG+GGG | + | Chr6:636085-636104 | None:intergenic | 40.0% |
| !! | TCAACACTGATTCGGAGAAA+TGG | - | Chr6:631823-631842 | MsG0680030328.01.T01:CDS | 40.0% |
| !! | TCTTTCTAGGGTTACAGTAC+AGG | - | Chr6:634933-634952 | MsG0680030328.01.T01:intron | 40.0% |
| !! | TTTCTCTCAAAGGGTATTGG+AGG | + | Chr6:632342-632361 | None:intergenic | 40.0% |
| !!! | CGCCCTATTTTTGAAGTTTC+CGG | + | Chr6:636026-636045 | None:intergenic | 40.0% |
| AAAAGAGAGTCCAGATGCTG+AGG | - | Chr6:636339-636358 | MsG0680030328.01.T01:intron | 45.0% | |
| AAGGCGCGTGAGAATCTTAT+AGG | + | Chr6:635886-635905 | None:intergenic | 45.0% | |
| AGGTGGATATCTGAAAGAGG+AGG | - | Chr6:632495-632514 | MsG0680030328.01.T01:intron | 45.0% | |
| CACCAGCACCATGGAAAAAA+AGG | + | Chr6:636097-636116 | None:intergenic | 45.0% | |
| CCGGATTTCATAATCCGGAA+TGG | - | Chr6:635942-635961 | MsG0680030328.01.T01:CDS | 45.0% | |
| CGCGTGAGAATCTTATAGGA+TGG | + | Chr6:635882-635901 | None:intergenic | 45.0% | |
| CTGGATAAGTCCCAAACTCT+TGG | - | Chr6:633109-633128 | MsG0680030328.01.T01:intron | 45.0% | |
| CTTTCAGATATCCACCTCTC+TGG | + | Chr6:632492-632511 | None:intergenic | 45.0% | |
| GAACATGACCATCCACTACT+TGG | + | Chr6:632647-632666 | None:intergenic | 45.0% | |
| GACTTGGAAGGTGGTACTTA+TGG | - | Chr6:636214-636233 | MsG0680030328.01.T01:intron | 45.0% | |
| GAGAGGTGGATATCTGAAAG+AGG | - | Chr6:632492-632511 | MsG0680030328.01.T01:intron | 45.0% | |
| GCAATCCGGATTACGTAATC+CGG | - | Chr6:636116-636135 | MsG0680030328.01.T01:CDS | 45.0% | |
| GTTGTCCGGATTACGTAATC+CGG | + | Chr6:636124-636143 | None:intergenic | 45.0% | |
| TCTCAACAAATTCGTAGGCC+CGG | + | Chr6:635516-635535 | None:intergenic | 45.0% | |
| ! | GCTAGAGTGTTAGCAAAGAG+AGG | - | Chr6:636253-636272 | MsG0680030328.01.T01:intron | 45.0% |
| ! | GCTGGACCTAGAACTTGTTT+GGG | - | Chr6:632558-632577 | MsG0680030328.01.T01:intron | 45.0% |
| ! | GGCTAGGGCTTGTTTATGAA+AGG | + | Chr6:633708-633727 | None:intergenic | 45.0% |
| ! | TGCTGGACCTAGAACTTGTT+TGG | - | Chr6:632557-632576 | MsG0680030328.01.T01:intron | 45.0% |
| !! | GAATTACTGCTGGTGTTGTC+CGG | + | Chr6:636138-636157 | None:intergenic | 45.0% |
| !! | GGCCTACGAATTTGTTGAGA+CGG | - | Chr6:635516-635535 | MsG0680030328.01.T01:intron | 45.0% |
| !! | TGTCGTCGATATTGACTCGT+TGG | - | Chr6:634148-634167 | MsG0680030328.01.T01:intron | 45.0% |
| !! | TGTGGTCAATATTGGCTCGT+TGG | - | Chr6:635158-635177 | MsG0680030328.01.T01:intron | 45.0% |
| !!! | ACCCTTTTTTTCCATGGTGC+TGG | - | Chr6:636092-636111 | MsG0680030328.01.T01:CDS | 45.0% |
| !!! | GGCCCGGTTTTATTCTTTTG+AGG | + | Chr6:635500-635519 | None:intergenic | 45.0% |
| !! | ATATTTAATAAAACATTTAA+AGG | - | Chr6:635831-635850 | MsG0680030328.01.T01:CDS | 5.0% |
| !! | GAATATTTAATATATTAATT+TGG | - | Chr6:632920-632939 | MsG0680030328.01.T01:intron | 5.0% |
| !!! | GTAAAAAAAAATTAAATTTT+GGG | + | Chr6:635474-635493 | None:intergenic | 5.0% |
| !!! | TGTAAAAAAAAATTAAATTT+TGG | + | Chr6:635475-635494 | None:intergenic | 5.0% |
| !!! | TTGTTTTTTATTTTATTTAT+GGG | - | Chr6:632847-632866 | MsG0680030328.01.T01:intron | 5.0% |
| GGCCGTCTCAACAAATTCGT+AGG | + | Chr6:635521-635540 | None:intergenic | 50.0% | |
| GGCGCGTTACATGATGTTTC+CGG | - | Chr6:636042-636061 | MsG0680030328.01.T01:CDS | 50.0% | |
| TGGTGCATGGGACTTGAAGA+AGG | - | Chr6:636291-636310 | MsG0680030328.01.T01:intron | 50.0% | |
| ! | GTTTGGAGTTCAAGCCAGAG+AGG | - | Chr6:632475-632494 | MsG0680030328.01.T01:intron | 50.0% |
| !! | AAGGGTGTTTAGGGGGTGTT+CGG | + | Chr6:636078-636097 | None:intergenic | 50.0% |
| TGGAGTTCAAGCCAGAGAGG+TGG | - | Chr6:632478-632497 | MsG0680030328.01.T01:intron | 55.0% | |
| !! | TCCATGGTGCTGGTGCAATC+CGG | - | Chr6:636102-636121 | MsG0680030328.01.T01:CDS | 55.0% |
| TCCGGATTGCACCAGCACCA+TGG | + | Chr6:636106-636125 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 631744 | 636687 | 631744 | ID=MsG0680030328.01;Name=MsG0680030328.01 |
| Chr6 | mRNA | 631744 | 636687 | 631744 | ID=MsG0680030328.01.T01;Parent=MsG0680030328.01;Name=MsG0680030328.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0.66|0.75|4|0|335 |
| Chr6 | exon | 636516 | 636687 | 636516 | ID=MsG0680030328.01.T01:exon:2220;Parent=MsG0680030328.01.T01 |
| Chr6 | exon | 635726 | 636223 | 635726 | ID=MsG0680030328.01.T01:exon:2219;Parent=MsG0680030328.01.T01 |
| Chr6 | exon | 631976 | 632207 | 631976 | ID=MsG0680030328.01.T01:exon:2218;Parent=MsG0680030328.01.T01 |
| Chr6 | exon | 631744 | 631849 | 631744 | ID=MsG0680030328.01.T01:exon:2217;Parent=MsG0680030328.01.T01 |
| Chr6 | CDS | 636516 | 636687 | 636516 | ID=MsG0680030328.01.T01:cds;Parent=MsG0680030328.01.T01 |
| Chr6 | CDS | 635726 | 636223 | 635726 | ID=MsG0680030328.01.T01:cds;Parent=MsG0680030328.01.T01 |
| Chr6 | CDS | 631976 | 632207 | 631976 | ID=MsG0680030328.01.T01:cds;Parent=MsG0680030328.01.T01 |
| Chr6 | CDS | 631744 | 631849 | 631744 | ID=MsG0680030328.01.T01:cds;Parent=MsG0680030328.01.T01 |
| Gene Sequence |
| Protein sequence |
