AlfalfaGEDB | MsG0780036081.01

M. sativa cultivar ZhongmuNo.1 / MsG0780036081.01

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036081.01.T01	KEH21552.1	49.55	222	56	5	4	169	3	224	4.67E-53	182

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036081.01.T01	O23257	44.706	85	36	1	12	85	1	85	8.35E-14	71.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036081.01.T01	A0A072TVT1	49.550	222	56	5	4	169	3	224	2.23e-53	182

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0780036081.01	MsG0280007849.01	PPI
MsG0780036081.01	MsG0780037551.01	PPI
MsG0780036081.01	MsG0480022015.01	PPI
MsG0780036081.01	MsG0280011351.01	PPI
MsG0780036081.01	MsG0580028652.01	PPI
MsG0780036081.01	MsG0780037584.01	PPI
MsG0780036081.01	MsG0780038148.01	PPI
MsG0780036081.01	MsG0280007849.01	PPI
MsG0780036081.01	MsG0580024322.01	PPI
MsG0780038510.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0780038471.01	PPI
MsG0780036081.01	MsG0780037542.01	PPI
MsG0780036081.01	MsG0580029020.01	PPI
MsG0780037547.01	MsG0780036081.01	PPI
MsG0780037561.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0080048156.01	PPI
MsG0780036081.01	MsG0480022017.01	PPI
MsG0780036081.01	MsG0780037561.01	PPI
MsG0780036081.01	MsG0180006146.01	PPI
MsG0780036081.01	MsG0780038469.01	PPI
MsG0780036081.01	MsG0780041655.01	PPI
MsG0780036081.01	MsG0380017479.01	PPI
MsG0780036081.01	MsG0780037872.01	PPI
MsG0780036081.01	MsG0780037561.01	PPI
MsG0780037598.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0380014181.01	PPI
MsG0780036081.01	MsG0780037556.01	PPI
MsG0780036081.01	MsG0280008689.01	PPI
MsG0780036081.01	MsG0780038468.01	PPI
MsG0780038502.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0580024537.01	PPI
MsG0780036081.01	MsG0080049065.01	PPI
MsG0780036081.01	MsG0580029019.01	PPI
MsG0780037385.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0580028297.01	PPI
MsG0780036081.01	MsG0780037584.01	PPI
MsG0780036081.01	MsG0180005013.01	PPI
MsG0280008687.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0780037584.01	PPI
MsG0580024321.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0780037380.01	PPI
MsG0780036081.01	MsG0280011360.01	PPI
MsG0780036081.01	MsG0780037546.01	PPI
MsG0780036081.01	MsG0780037573.01	PPI
MsG0780036081.01	MsG0780037574.01	PPI
MsG0780036081.01	MsG0780038508.01	PPI
MsG0780036081.01	MsG0480022109.01	PPI
MsG0780036081.01	MsG0780038497.01	PPI
MsG0780036081.01	MsG0780037181.01	PPI
MsG0780036081.01	MsG0780041629.01	PPI
MsG0780036081.01	MsG0380017513.01	PPI
MsG0780036081.01	MsG0180005012.01	PPI
MsG0780036081.01	MsG0580024319.01	PPI
MsG0780036081.01	MsG0780037561.01	PPI
MsG0780036081.01	MsG0780037381.01	PPI
MsG0780036081.01	MsG0780037379.01	PPI
MsG0780036081.01	MsG0280011356.01	PPI
MsG0780036081.01	MsG0580028638.01	PPI
MsG0780036081.01	MsG0780038504.01	PPI
MsG0780036081.01	MsG0780037375.01	PPI
MsG0780036081.01	MsG0780038501.01	PPI
MsG0780037590.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0780038510.01	PPI
MsG0780036081.01	MsG0780041655.01	PPI
MsG0780036081.01	MsG0780041655.01	PPI
MsG0780036081.01	MsG0380012970.01	PPI
MsG0780037378.01	MsG0780036081.01	PPI
MsG0780036081.01	MsG0780041655.01	PPI
MsG0780036081.01	MsG0780037584.01	PPI
MsG0780036081.01	MsG0780038510.01	PPI
MsG0780036081.01	MsG0780037367.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036081.01.T01	MTR_7g007370	49.550	222	56	5	4	169	3	224	5.65e-57	182
MsG0780036081.01.T01	MTR_7g007340	87.356	87	11	0	83	169	149	235	5.59e-49	162
MsG0780036081.01.T01	MTR_7g007340	89.157	83	9	0	1	83	1	83	8.51e-43	146
MsG0780036081.01.T01	MTR_2g007090	43.956	182	66	4	12	169	9	178	5.94e-31	114
MsG0780036081.01.T01	MTR_7g033470	62.651	83	27	2	4	82	5	87	2.88e-28	103
MsG0780036081.01.T01	MTR_2g007400	64.706	85	26	2	1	82	1	84	2.66e-25	100
MsG0780036081.01.T01	MTR_2g007400	53.191	94	35	3	83	168	185	277	2.60e-17	78.6
MsG0780036081.01.T01	MTR_2g005990	61.972	71	24	1	9	76	2	72	8.61e-23	94.0
MsG0780036081.01.T01	MTR_2g005990	48.387	93	42	3	83	169	178	270	2.89e-14	70.1
MsG0780036081.01.T01	MTR_2g008320	62.025	79	27	1	7	82	46	124	1.82e-22	93.2
MsG0780036081.01.T01	MTR_2g008320	41.837	98	46	2	83	169	213	310	3.37e-12	63.9
MsG0780036081.01.T01	MTR_3g099830	58.025	81	31	1	5	82	4	84	6.38e-22	91.3
MsG0780036081.01.T01	MTR_3g099830	54.255	94	32	4	83	169	159	248	5.64e-18	80.5
MsG0780036081.01.T01	MTR_2g007360	60.000	85	30	3	1	82	1	84	5.23e-21	88.6
MsG0780036081.01.T01	MTR_2g007360	45.918	98	41	3	83	168	145	242	1.28e-15	73.6
MsG0780036081.01.T01	MTR_2g008310	61.333	75	26	1	12	83	1	75	3.45e-20	86.7
MsG0780036081.01.T01	MTR_2g007550	32.000	225	89	9	3	169	4	222	1.75e-18	81.6
MsG0780036081.01.T01	MTR_5g083890	58.904	73	27	1	13	82	6	78	3.45e-17	78.6
MsG0780036081.01.T01	MTR_5g083890	49.398	83	34	4	95	169	196	278	1.50e-13	68.2
MsG0780036081.01.T01	MTR_2g007450	50.000	84	37	2	7	86	10	92	1.11e-16	77.0
MsG0780036081.01.T01	MTR_2g007500	56.338	71	28	1	8	75	9	79	6.29e-15	71.6
MsG0780036081.01.T01	MTR_8g014180	64.583	48	17	0	2	49	6	53	1.37e-14	65.5
MsG0780036081.01.T01	MTR_2g007460	45.783	83	27	2	3	82	2	69	1.66e-14	66.6
MsG0780036081.01.T01	MTR_3g023470	41.346	104	52	2	13	112	15	113	1.80e-14	70.5
MsG0780036081.01.T01	MTR_7g075820	48.611	72	34	1	13	81	6	77	2.09e-14	70.5
MsG0780036081.01.T01	MTR_7g075820	43.956	91	46	2	84	169	187	277	2.99e-13	67.0
MsG0780036081.01.T01	MTR_2g007530	32.051	156	90	3	7	160	13	154	3.77e-14	69.3
MsG0780036081.01.T01	MTR_1g041245	50.685	73	36	0	8	80	6	78	3.97e-14	69.7
MsG0780036081.01.T01	MTR_1g041245	41.935	93	51	2	80	169	166	258	8.90e-11	60.1
MsG0780036081.01.T01	MTR_1g107385	47.436	78	38	1	8	82	27	104	4.00e-14	69.7
MsG0780036081.01.T01	MTR_1g107385	40.625	96	44	5	84	169	209	301	5.37e-12	63.5
MsG0780036081.01.T01	MTR_1g053025	50.000	92	33	4	12	91	1	91	5.83e-14	68.9
MsG0780036081.01.T01	MTR_1g108800	30.973	226	80	8	12	169	7	224	7.64e-14	68.6
MsG0780036081.01.T01	MTR_6g029350	50.617	81	32	3	95	169	2	80	8.19e-14	67.4
MsG0780036081.01.T01	MTR_7g032380	44.681	94	49	2	1	94	1	91	9.46e-14	68.2
MsG0780036081.01.T01	MTR_3g105060	49.398	83	40	1	8	90	9	89	1.99e-13	67.4
MsG0780036081.01.T01	MTR_4g092430	40.000	85	47	1	13	93	43	127	2.01e-13	67.8
MsG0780036081.01.T01	MTR_4g092430	40.000	85	47	1	13	93	43	127	2.20e-13	67.4
MsG0780036081.01.T01	MTR_7g098510	37.226	137	67	5	11	137	16	143	2.45e-13	67.4
MsG0780036081.01.T01	MTR_3g467400	49.296	71	36	0	12	82	2	72	2.50e-13	67.0
MsG0780036081.01.T01	MTR_8g066650	41.346	104	60	1	9	112	76	178	2.52e-13	67.4
MsG0780036081.01.T01	MTR_2g007100	43.836	73	35	1	12	78	1	73	2.74e-13	62.4
MsG0780036081.01.T01	MTR_6g044560	50.000	66	33	0	6	71	171	236	2.85e-13	67.4
MsG0780036081.01.T01	MTR_3g107100	50.794	63	31	0	13	75	11	73	3.41e-13	67.0
MsG0780036081.01.T01	MTR_4g024770	52.542	59	28	0	2	60	13	71	3.86e-13	62.0
MsG0780036081.01.T01	MTR_4g045680	38.739	111	59	2	11	117	14	119	4.47e-13	66.6
MsG0780036081.01.T01	MTR_5g087940	34.286	140	77	4	4	128	11	150	4.51e-13	66.6
MsG0780036081.01.T01	MTR_8g062080	45.783	83	41	3	7	85	17	99	5.43e-13	66.2
MsG0780036081.01.T01	MTR_7g098590	51.429	70	34	0	11	80	16	85	5.49e-13	63.2
MsG0780036081.01.T01	MTR_6g044572	53.333	60	28	0	12	71	1	60	6.44e-13	66.2
MsG0780036081.01.T01	MTR_7g056433	48.684	76	38	1	1	76	1	75	7.48e-13	65.9
MsG0780036081.01.T01	MTR_3g023630	56.061	66	29	0	11	76	6	71	8.04e-13	65.9
MsG0780036081.01.T01	MTR_7g034110	47.297	74	39	0	8	81	6	79	9.14e-13	65.5
MsG0780036081.01.T01	MTR_7g033990	50.000	72	36	0	8	79	6	77	9.98e-13	65.5
MsG0780036081.01.T01	MTR_1g077420	38.554	83	46	1	13	90	4	86	1.01e-12	64.7
MsG0780036081.01.T01	MTR_7g083740	50.000	74	34	1	12	82	16	89	1.07e-12	65.5
MsG0780036081.01.T01	MTR_7g055943	48.889	90	42	2	12	98	39	127	1.10e-12	65.5
MsG0780036081.01.T01	MTR_2g082860	42.222	90	38	3	13	100	27	104	1.14e-12	62.0
MsG0780036081.01.T01	MTR_7g034090	35.417	192	94	7	13	174	4	195	1.15e-12	65.5
MsG0780036081.01.T01	MTR_1g095750	50.000	68	34	0	12	79	45	112	1.17e-12	62.4
MsG0780036081.01.T01	MTR_7g098480	52.778	72	34	0	11	82	16	87	1.39e-12	65.1
MsG0780036081.01.T01	MTR_3g107160	46.667	75	38	2	13	85	10	84	1.63e-12	65.1
MsG0780036081.01.T01	MTR_2g103680	57.143	56	20	1	1	56	1	52	1.95e-12	61.6
MsG0780036081.01.T01	MTR_8g465650	42.500	80	45	1	1	80	1	79	2.61e-12	64.3
MsG0780036081.01.T01	MTR_3g108560	49.254	67	34	0	11	77	18	84	2.93e-12	63.9
MsG0780036081.01.T01	MTR_3g040700	44.048	84	44	1	1	84	31	111	3.01e-12	64.3
MsG0780036081.01.T01	MTR_7g033945	47.222	72	38	0	8	79	6	77	3.36e-12	62.0
MsG0780036081.01.T01	MTR_3g108560	49.254	67	34	0	11	77	18	84	3.49e-12	63.9
MsG0780036081.01.T01	MTR_8g445780	46.774	62	33	0	1	62	1	62	3.52e-12	63.9
MsG0780036081.01.T01	MTR_3g026920	46.250	80	38	2	7	82	13	91	3.63e-12	63.9
MsG0780036081.01.T01	MTR_7g033940	48.529	68	35	0	12	79	93	160	3.92e-12	62.8
MsG0780036081.01.T01	MTR_7g098570	48.052	77	40	0	3	79	10	86	4.32e-12	63.9
MsG0780036081.01.T01	MTR_7g056277	55.102	49	22	0	13	61	259	307	4.74e-12	63.9
MsG0780036081.01.T01	MTR_6g018660	41.379	87	47	1	12	94	19	105	5.03e-12	63.5
MsG0780036081.01.T01	MTR_8g469020	41.250	80	40	2	13	85	7	86	5.38e-12	63.5
MsG0780036081.01.T01	MTR_7g056420	49.254	67	34	0	13	79	9	75	6.09e-12	63.5
MsG0780036081.01.T01	MTR_7g056430	49.254	67	34	0	13	79	9	75	6.67e-12	63.5
MsG0780036081.01.T01	MTR_3g019220	42.478	113	51	2	11	116	24	129	7.19e-12	63.2
MsG0780036081.01.T01	MTR_5g073420	40.426	94	51	3	10	99	8	100	7.19e-12	63.2
MsG0780036081.01.T01	MTR_2g083840	41.111	90	46	3	3	85	11	100	8.12e-12	63.2
MsG0780036081.01.T01	MTR_0438s0020	37.963	108	60	1	3	110	58	158	9.22e-12	62.8
MsG0780036081.01.T01	MTR_7g033915	47.222	72	38	0	8	79	6	77	9.25e-12	62.8
MsG0780036081.01.T01	MTR_5g044860	36.154	130	69	4	13	128	30	159	9.32e-12	62.8
MsG0780036081.01.T01	MTR_5g044800	36.154	130	69	4	13	128	30	159	9.41e-12	62.8
MsG0780036081.01.T01	MTR_4g092440	37.647	85	49	1	13	93	32	116	1.02e-11	62.8
MsG0780036081.01.T01	MTR_4g051640	35.294	102	61	2	3	100	21	121	1.07e-11	60.5
MsG0780036081.01.T01	MTR_7g056287	44.776	67	36	1	13	78	3	69	1.17e-11	62.4
MsG0780036081.01.T01	MTR_7g084080	47.059	68	36	0	13	80	17	84	1.18e-11	62.0
MsG0780036081.01.T01	MTR_7g056280	37.903	124	60	4	11	126	4	118	1.24e-11	62.4
MsG0780036081.01.T01	MTR_3g108150	41.772	79	46	0	1	79	1	79	1.34e-11	62.4
MsG0780036081.01.T01	MTR_6g011460	43.820	89	46	2	12	97	45	132	1.35e-11	62.4
MsG0780036081.01.T01	MTR_4g051510	35.537	121	63	4	13	118	35	155	1.48e-11	62.0
MsG0780036081.01.T01	MTR_5g082930	49.180	61	31	0	15	75	17	77	1.64e-11	60.8
MsG0780036081.01.T01	MTR_4g092440	37.647	85	49	1	13	93	32	116	1.65e-11	62.0
MsG0780036081.01.T01	MTR_4g024720	51.724	58	28	0	2	59	6	63	1.67e-11	60.8
MsG0780036081.01.T01	MTR_5g045170	30.556	144	79	4	4	128	5	146	1.68e-11	62.0
MsG0780036081.01.T01	MTR_3g113782	57.143	49	21	0	11	59	15	63	1.68e-11	58.2
MsG0780036081.01.T01	MTR_8g085430	50.769	65	32	0	12	76	10	74	1.74e-11	61.6
MsG0780036081.01.T01	MTR_7g056447	49.254	67	34	0	13	79	9	75	2.05e-11	61.2
MsG0780036081.01.T01	MTR_8g058965	30.939	181	94	7	1	150	1	181	2.24e-11	61.6
MsG0780036081.01.T01	MTR_7g007080	51.515	66	29	1	10	72	1	66	2.39e-11	61.6
MsG0780036081.01.T01	MTR_4g051480	38.947	95	49	2	13	98	25	119	2.42e-11	61.6
MsG0780036081.01.T01	MTR_4g092300	38.947	95	49	2	13	98	25	119	2.50e-11	61.6
MsG0780036081.01.T01	MTR_8g465380	40.000	80	47	1	1	80	1	79	3.07e-11	61.2
MsG0780036081.01.T01	MTR_3g082890	55.556	63	24	1	1	59	1	63	3.14e-11	61.2
MsG0780036081.01.T01	MTR_3g082890	55.556	63	24	1	1	59	81	143	3.40e-11	61.2
MsG0780036081.01.T01	MTR_8g467800	42.105	76	41	1	13	85	20	95	3.64e-11	60.8
MsG0780036081.01.T01	MTR_3g036250	48.684	76	36	1	11	86	3	75	3.90e-11	60.8
MsG0780036081.01.T01	MTR_3g019200	40.541	111	52	2	13	116	8	111	3.94e-11	60.8
MsG0780036081.01.T01	MTR_5g084070	40.000	85	50	1	1	85	1	84	4.59e-11	60.8
MsG0780036081.01.T01	MTR_1g492880	50.000	74	35	1	11	82	4	77	4.73e-11	57.0
MsG0780036081.01.T01	MTR_4g092980	34.783	92	56	1	6	93	7	98	4.84e-11	60.8
MsG0780036081.01.T01	MTR_1g492880	50.000	74	35	1	11	82	4	77	5.28e-11	57.4
MsG0780036081.01.T01	MTR_7g115270	35.965	114	66	1	13	126	12	118	5.56e-11	60.5
MsG0780036081.01.T01	MTR_7g081290	55.738	61	24	1	2	59	4	64	5.84e-11	59.7
MsG0780036081.01.T01	MTR_8g062010	40.741	81	40	3	13	85	9	89	6.40e-11	60.5
MsG0780036081.01.T01	MTR_8g467800	42.105	76	41	1	13	85	20	95	7.24e-11	60.1
MsG0780036081.01.T01	MTR_3g023270	45.714	70	38	0	10	79	9	78	7.30e-11	60.1
MsG0780036081.01.T01	MTR_3g114200	61.224	49	19	0	11	59	17	65	8.19e-11	57.8
MsG0780036081.01.T01	MTR_7g021630	36.538	104	49	3	13	112	17	107	9.78e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036081.01.T01	AT4G13960	44.706	85	36	1	12	85	1	85	7.30e-15	72.0
MsG0780036081.01.T01	AT4G13960	44.706	85	36	1	12	85	1	85	7.30e-15	72.0
MsG0780036081.01.T01	AT3G58860	43.023	86	38	1	11	85	5	90	1.30e-14	71.2
MsG0780036081.01.T01	AT3G59200	41.176	85	41	1	10	85	4	88	1.77e-14	70.5
MsG0780036081.01.T01	AT1G80470	28.655	171	112	4	6	175	8	169	2.78e-14	70.1
MsG0780036081.01.T01	AT3G59200	41.176	85	41	1	10	85	4	88	2.97e-14	70.1
MsG0780036081.01.T01	AT5G41840	44.944	89	38	2	2	79	3	91	3.86e-14	69.7
MsG0780036081.01.T01	AT5G41830	31.429	140	65	3	13	141	13	132	4.83e-14	69.7
MsG0780036081.01.T01	AT4G00320	42.045	88	40	1	13	89	13	100	6.35e-14	69.3
MsG0780036081.01.T01	AT3G58880	44.706	85	36	1	12	85	2	86	1.77e-13	67.8
MsG0780036081.01.T01	AT2G04230	42.045	88	44	1	1	81	1	88	1.79e-13	67.8
MsG0780036081.01.T01	AT5G56420	47.297	74	38	1	13	85	6	79	1.88e-13	67.8
MsG0780036081.01.T01	AT5G56420	47.297	74	38	1	13	85	6	79	1.88e-13	67.8
MsG0780036081.01.T01	AT5G56420	47.297	74	38	1	13	85	6	79	1.88e-13	67.8
MsG0780036081.01.T01	AT4G14103	35.185	162	85	6	13	165	8	158	2.20e-13	67.4
MsG0780036081.01.T01	AT4G14103	35.185	162	85	6	13	165	8	158	3.66e-13	66.6
MsG0780036081.01.T01	AT4G14103	35.185	162	85	6	13	165	8	158	3.66e-13	66.6
MsG0780036081.01.T01	AT5G38390	47.297	74	37	1	12	85	1	72	4.90e-13	66.6
MsG0780036081.01.T01	AT4G10400	46.053	76	39	1	12	85	1	76	5.31e-13	66.2
MsG0780036081.01.T01	AT4G10400	46.053	76	39	1	12	85	1	76	5.31e-13	66.2
MsG0780036081.01.T01	AT4G10400	46.053	76	39	1	12	85	1	76	5.31e-13	66.2
MsG0780036081.01.T01	AT1G19070	43.590	78	39	2	12	85	1	77	9.27e-13	61.2
MsG0780036081.01.T01	AT1G60400	38.824	85	51	1	12	95	13	97	1.00e-12	65.5
MsG0780036081.01.T01	AT5G56370	49.296	71	35	1	12	81	1	71	1.52e-12	64.7
MsG0780036081.01.T01	AT5G56370	49.296	71	35	1	12	81	1	71	1.60e-12	65.1
MsG0780036081.01.T01	AT5G56370	49.296	71	35	1	12	81	1	71	1.60e-12	65.1
MsG0780036081.01.T01	AT1G26890	38.835	103	54	4	1	101	24	119	1.64e-12	64.7
MsG0780036081.01.T01	AT1G26890	38.835	103	54	4	1	101	24	119	1.64e-12	64.7
MsG0780036081.01.T01	AT1G26890	39.535	86	47	2	1	84	24	106	1.67e-12	65.1
MsG0780036081.01.T01	AT1G26890	39.535	86	47	2	1	84	24	106	1.67e-12	65.1
MsG0780036081.01.T01	AT5G38590	38.000	100	46	2	12	111	1	84	1.87e-12	64.3
MsG0780036081.01.T01	AT3G59000	43.529	85	37	2	12	85	1	85	1.93e-12	64.7
MsG0780036081.01.T01	AT1G26890	39.535	86	47	2	1	84	24	106	1.97e-12	64.7
MsG0780036081.01.T01	AT4G09920	44.737	76	40	1	12	85	1	76	2.51e-12	63.9
MsG0780036081.01.T01	AT4G09920	44.737	76	40	1	12	85	1	76	2.51e-12	63.9
MsG0780036081.01.T01	AT4G09920	44.737	76	40	1	12	85	1	76	2.51e-12	63.9
MsG0780036081.01.T01	AT5G38590	38.000	100	46	2	12	111	1	84	2.62e-12	63.9
MsG0780036081.01.T01	AT3G59000	43.529	85	37	2	12	85	1	85	2.74e-12	64.3
MsG0780036081.01.T01	AT4G09920	44.737	76	40	1	12	85	1	76	3.03e-12	63.9
MsG0780036081.01.T01	AT4G09920	44.737	76	40	1	12	85	1	76	3.03e-12	63.9
MsG0780036081.01.T01	AT2G26860	44.595	74	41	0	12	85	1	74	3.44e-12	63.9
MsG0780036081.01.T01	AT2G26860	44.595	74	41	0	12	85	1	74	3.44e-12	63.9
MsG0780036081.01.T01	AT3G50710	45.122	82	39	2	12	87	1	82	3.50e-12	63.9
MsG0780036081.01.T01	AT5G38590	38.000	100	46	2	12	111	1	84	4.36e-12	63.9
MsG0780036081.01.T01	AT5G38386	40.000	85	40	1	12	85	1	85	6.10e-12	63.2
MsG0780036081.01.T01	AT5G38386	40.000	85	40	1	12	85	1	85	6.10e-12	63.2
MsG0780036081.01.T01	AT1G16930	48.438	64	33	0	13	76	15	78	6.40e-12	63.2
MsG0780036081.01.T01	AT1G16930	48.438	64	33	0	13	76	15	78	6.40e-12	63.2
MsG0780036081.01.T01	AT1G16930	48.438	64	33	0	13	76	15	78	6.40e-12	63.2
MsG0780036081.01.T01	AT2G42720	52.308	65	30	1	12	75	1	65	7.28e-12	63.2
MsG0780036081.01.T01	AT4G14096	44.156	77	36	1	13	82	8	84	1.11e-11	62.8
MsG0780036081.01.T01	AT4G14096	44.156	77	36	1	13	82	8	84	1.11e-11	62.8
MsG0780036081.01.T01	AT5G38392	39.024	82	39	1	12	82	1	82	1.45e-11	61.2
MsG0780036081.01.T01	AT4G15060	42.857	77	42	1	11	85	170	246	1.58e-11	62.4
MsG0780036081.01.T01	AT4G15060	42.857	77	42	1	11	85	24	100	1.80e-11	62.0
MsG0780036081.01.T01	AT5G18780	40.244	82	49	0	4	85	2	83	2.08e-11	61.6
MsG0780036081.01.T01	AT5G18780	40.244	82	49	0	4	85	2	83	2.08e-11	61.6
MsG0780036081.01.T01	AT5G18780	40.244	82	49	0	4	85	2	83	2.69e-11	61.6
MsG0780036081.01.T01	AT5G18780	40.244	82	49	0	4	85	2	83	2.69e-11	61.6
MsG0780036081.01.T01	AT1G69630	48.485	66	34	0	11	76	16	81	2.85e-11	61.6
MsG0780036081.01.T01	AT3G58940	40.594	101	44	4	12	100	1	97	2.90e-11	61.6
MsG0780036081.01.T01	AT3G58940	40.594	101	44	4	12	100	1	97	2.90e-11	61.6
MsG0780036081.01.T01	AT5G41630	42.222	90	40	2	13	90	12	101	2.91e-11	61.6
MsG0780036081.01.T01	AT5G38565	56.000	50	22	0	12	61	1	50	3.33e-11	61.2
MsG0780036081.01.T01	AT5G56440	44.444	72	38	1	12	81	1	72	3.55e-11	61.2
MsG0780036081.01.T01	AT3G59210	44.737	76	33	1	13	79	7	82	3.66e-11	61.2
MsG0780036081.01.T01	AT3G59210	44.737	76	33	1	13	79	7	82	3.66e-11	61.2
MsG0780036081.01.T01	AT3G59210	44.737	76	33	1	13	79	7	82	3.66e-11	61.2
MsG0780036081.01.T01	AT3G59210	44.737	76	33	1	13	79	7	82	3.66e-11	61.2
MsG0780036081.01.T01	AT3G59210	44.737	76	33	1	13	79	7	82	3.66e-11	61.2
MsG0780036081.01.T01	AT3G49030	53.061	49	23	0	9	57	17	65	3.83e-11	61.2
MsG0780036081.01.T01	AT1G78760	34.177	79	52	0	4	82	7	85	3.83e-11	61.2
MsG0780036081.01.T01	AT3G49030	53.061	49	23	0	9	57	17	65	3.99e-11	60.8
MsG0780036081.01.T01	AT5G60610	60.000	45	18	0	12	56	1	45	4.26e-11	60.8
MsG0780036081.01.T01	AT5G60610	60.000	45	18	0	12	56	1	45	4.26e-11	60.8
MsG0780036081.01.T01	AT3G58950	41.026	78	42	1	12	85	1	78	4.81e-11	60.8
MsG0780036081.01.T01	AT4G26340	42.667	75	42	1	12	85	1	75	6.55e-11	60.5
MsG0780036081.01.T01	AT1G66310	38.356	73	45	0	4	76	10	82	7.56e-11	60.1
MsG0780036081.01.T01	AT1G49610	45.946	74	36	1	11	84	24	93	8.10e-11	60.1
MsG0780036081.01.T01	AT3G58820	45.882	85	35	2	12	85	1	85	8.50e-11	60.1
MsG0780036081.01.T01	AT5G56690	31.609	174	88	8	15	161	4	173	8.73e-11	60.1
MsG0780036081.01.T01	AT3G62440	40.541	74	43	1	12	85	1	73	9.62e-11	60.1
MsG0780036081.01.T01	AT5G38570	40.541	74	43	1	12	85	1	73	9.87e-11	59.7

Find 31 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACATTAAGTTTGATCAATA+TGG	0.224778	7:-2161153	MsG0780036081.01.T01:CDS
GAGAAGAGAGAATGTGAATT+AGG	0.265448	7:+2161529	None:intergenic
GTTTCAGTAAAGTCAATATC+TGG	0.286460	7:+2161438	None:intergenic
AGCACCAATGAGTCAAATTA+TGG	0.301821	7:+2160828	None:intergenic
CATTGGTGCTCAACTACAAT+TGG	0.328833	7:-2160815	MsG0780036081.01.T01:CDS
CAAAGAGATGGAAGCATCTA+TGG	0.330199	7:-2161470	MsG0780036081.01.T01:CDS
CTTCCATCTCTTTGAAAGAA+TGG	0.335449	7:+2161479	None:intergenic
TGCTCTAATCAACTTTGTTA+AGG	0.363479	7:+2161029	None:intergenic
CATTCCATAATTTGACTCAT+TGG	0.376894	7:-2160832	MsG0780036081.01.T01:CDS
TAAGCGTGAATCGGAGTGTT+TGG	0.382527	7:+2161416	None:intergenic
CATCAACAGTGGAGGTAGAT+AGG	0.392066	7:-2161575	MsG0780036081.01.T01:CDS
GGAAGTGAGAAAGGCTTGTT+TGG	0.396517	7:+2161500	None:intergenic
CTTCCATTCTTTCAAAGAGA+TGG	0.410263	7:-2161482	MsG0780036081.01.T01:CDS
TGAAAGAATGGAAGTGAGAA+AGG	0.427103	7:+2161491	None:intergenic
ATTGGTGCTCAACTACAATT+GGG	0.432993	7:-2160814	MsG0780036081.01.T01:CDS
AGTTGAAGATCTTCAAGAAC+TGG	0.448679	7:+2161102	None:intergenic
GTGAGAAAGGCTTGTTTGGT+GGG	0.465858	7:+2161504	None:intergenic
TAAGGTTTCACAACATCTGT+TGG	0.481473	7:+2161047	None:intergenic
TGAGTCAAATTATGGAATGT+AGG	0.502815	7:+2160836	None:intergenic
TGGAATCAAGATAAATGAGA+TGG	0.528704	7:+2161067	None:intergenic
GGAATCAAGATAAATGAGAT+GGG	0.539337	7:+2161068	None:intergenic
AGTGAGAAAGGCTTGTTTGG+TGG	0.543183	7:+2161503	None:intergenic
ATGTGAATTAGGATATCGTC+TGG	0.546750	7:+2161540	None:intergenic
TTGTGCTTGCGAAAAGCTGC+TGG	0.550839	7:-2161369	MsG0780036081.01.T01:intron
ACATTTGAAAGTGCTTTCAT+CGG	0.557849	7:+2160979	None:intergenic
GATGAAAGCACTTTCAAATG+TGG	0.561000	7:-2160977	MsG0780036081.01.T01:CDS
AAAGTGCTTTCATCGGAACA+TGG	0.582783	7:+2160986	None:intergenic
TTTGTCGAATAAGCGTGAAT+CGG	0.583882	7:+2161407	None:intergenic
TCTACGCATAAAACTATACA+TGG	0.612384	7:-2160950	MsG0780036081.01.T01:intron
GTGGAGGTAGATAGGATAAG+CGG	0.686219	7:-2161567	MsG0780036081.01.T01:CDS
TTGGTGCTCAACTACAATTG+GGG	0.714546	7:-2160813	MsG0780036081.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAACAATACAAATGAA+TGG	+	Chr7:2161501-2161520	None:intergenic	15.0%
!!	AAGAATAGTATTAGACAATT+AGG	+	Chr7:2161125-2161144	None:intergenic	20.0%
!!	AGAATAGTATTAGACAATTA+GGG	+	Chr7:2161124-2161143	None:intergenic	20.0%
!	ACTTAATGTCTTTCAAATGT+AGG	+	Chr7:2161239-2161258	None:intergenic	25.0%
!	CTTAATGTCTTTCAAATGTA+GGG	+	Chr7:2161238-2161257	None:intergenic	25.0%
!	GAATAGTATTAGACAATTAG+GGG	+	Chr7:2161123-2161142	None:intergenic	25.0%
!	GACATTAAGTTTGATCAATA+TGG	-	Chr7:2161249-2161268	MsG0780036081.01.T01:intron	25.0%
!	TAAGCTCAGTTATCTTATAT+GGG	-	Chr7:2161168-2161187	MsG0780036081.01.T01:intron	25.0%
!	TTAAGCTCAGTTATCTTATA+TGG	-	Chr7:2161167-2161186	MsG0780036081.01.T01:intron	25.0%
	CATTCCATAATTTGACTCAT+TGG	-	Chr7:2161570-2161589	MsG0780036081.01.T01:CDS	30.0%
	GAAACACATATGGCATAATT+GGG	-	Chr7:2161088-2161107	MsG0780036081.01.T01:CDS	30.0%
	GGAATCAAGATAAATGAGAT+GGG	+	Chr7:2161337-2161356	None:intergenic	30.0%
	GTTTCAGTAAAGTCAATATC+TGG	+	Chr7:2160967-2160986	None:intergenic	30.0%
	TCTACGCATAAAACTATACA+TGG	-	Chr7:2161452-2161471	MsG0780036081.01.T01:CDS	30.0%
	TGAGTCAAATTATGGAATGT+AGG	+	Chr7:2161569-2161588	None:intergenic	30.0%
	TGCTCTAATCAACTTTGTTA+AGG	+	Chr7:2161376-2161395	None:intergenic	30.0%
	TGGAATCAAGATAAATGAGA+TGG	+	Chr7:2161338-2161357	None:intergenic	30.0%
	TTGAGTGAGGGTAATATTAT+GGG	+	Chr7:2161213-2161232	None:intergenic	30.0%
	TTTGAGTGAGGGTAATATTA+TGG	+	Chr7:2161214-2161233	None:intergenic	30.0%
!!	ACATTTGAAAGTGCTTTCAT+CGG	+	Chr7:2161426-2161445	None:intergenic	30.0%
	AGCACCAATGAGTCAAATTA+TGG	+	Chr7:2161577-2161596	None:intergenic	35.0%
	AGTTGAAGATCTTCAAGAAC+TGG	+	Chr7:2161303-2161322	None:intergenic	35.0%
	ATGTGAATTAGGATATCGTC+TGG	+	Chr7:2160865-2160884	None:intergenic	35.0%
	CTTCCATTCTTTCAAAGAGA+TGG	-	Chr7:2160920-2160939	MsG0780036081.01.T01:intron	35.0%
	GAGAAGAGAGAATGTGAATT+AGG	+	Chr7:2160876-2160895	None:intergenic	35.0%
	GGAAACACATATGGCATAAT+TGG	-	Chr7:2161087-2161106	MsG0780036081.01.T01:CDS	35.0%
	TAAGGTTTCACAACATCTGT+TGG	+	Chr7:2161358-2161377	None:intergenic	35.0%
	TCAGTTATCTTATATGGGTG+CGG	-	Chr7:2161173-2161192	MsG0780036081.01.T01:intron	35.0%
	TGAAAGAATGGAAGTGAGAA+AGG	+	Chr7:2160914-2160933	None:intergenic	35.0%
	TTTGTCGAATAAGCGTGAAT+CGG	+	Chr7:2160998-2161017	None:intergenic	35.0%
!	ATTGGTGCTCAACTACAATT+GGG	-	Chr7:2161588-2161607	MsG0780036081.01.T01:CDS	35.0%
!	CTTCCATCTCTTTGAAAGAA+TGG	+	Chr7:2160926-2160945	None:intergenic	35.0%
!!	GATGAAAGCACTTTCAAATG+TGG	-	Chr7:2161425-2161444	MsG0780036081.01.T01:CDS	35.0%
!!!	AAATGTAGGGTTTTGAGTGA+GGG	+	Chr7:2161225-2161244	None:intergenic	35.0%
	AACTGAGCTTAAGAACAACG+AGG	+	Chr7:2161159-2161178	None:intergenic	40.0%
	ACTGAGCTTAAGAACAACGA+GGG	+	Chr7:2161158-2161177	None:intergenic	40.0%
!	AAAGTGCTTTCATCGGAACA+TGG	+	Chr7:2161419-2161438	None:intergenic	40.0%
!	ACCTCCACTGTTGATGTTTT+TGG	+	Chr7:2160823-2160842	None:intergenic	40.0%
!	CATTGGTGCTCAACTACAAT+TGG	-	Chr7:2161587-2161606	MsG0780036081.01.T01:CDS	40.0%
!	TTGGTGCTCAACTACAATTG+GGG	-	Chr7:2161589-2161608	MsG0780036081.01.T01:CDS	40.0%
!!	CAAAGAGATGGAAGCATCTA+TGG	-	Chr7:2160932-2160951	MsG0780036081.01.T01:intron	40.0%
!!!	CAAATGTAGGGTTTTGAGTG+AGG	+	Chr7:2161226-2161245	None:intergenic	40.0%
	ATCCACAGTTTCATCCTGGA+CGG	-	Chr7:2161065-2161084	MsG0780036081.01.T01:CDS	45.0%
	ATCCATCCACAGTTTCATCC+TGG	-	Chr7:2161061-2161080	MsG0780036081.01.T01:CDS	45.0%
	CATCAACAGTGGAGGTAGAT+AGG	-	Chr7:2160827-2160846	MsG0780036081.01.T01:CDS	45.0%
	GCAGCCAAAAACATCAACAG+TGG	-	Chr7:2160816-2160835	MsG0780036081.01.T01:CDS	45.0%
	GCCAAAAACATCAACAGTGG+AGG	-	Chr7:2160819-2160838	MsG0780036081.01.T01:CDS	45.0%
	GTGGAGGTAGATAGGATAAG+CGG	-	Chr7:2160835-2160854	MsG0780036081.01.T01:CDS	45.0%
!	AGCTTTTCGCAAGCACAAGA+TGG	+	Chr7:2161031-2161050	None:intergenic	45.0%
!	AGTGAGAAAGGCTTGTTTGG+TGG	+	Chr7:2160902-2160921	None:intergenic	45.0%
!	GGAAGTGAGAAAGGCTTGTT+TGG	+	Chr7:2160905-2160924	None:intergenic	45.0%
!	GTGAGAAAGGCTTGTTTGGT+GGG	+	Chr7:2160901-2160920	None:intergenic	45.0%
!	TAAGCGTGAATCGGAGTGTT+TGG	+	Chr7:2160989-2161008	None:intergenic	45.0%
	GTCCAGGATGAAACTGTGGA+TGG	+	Chr7:2161066-2161085	None:intergenic	50.0%
	TCCACAGTTTCATCCTGGAC+GGG	-	Chr7:2161066-2161085	MsG0780036081.01.T01:CDS	50.0%
	TCCTGGACGGGAAACACATA+TGG	-	Chr7:2161078-2161097	MsG0780036081.01.T01:CDS	50.0%
	TTGTGCTTGCGAAAAGCTGC+TGG	-	Chr7:2161033-2161052	MsG0780036081.01.T01:CDS	50.0%
	GCCATATGTGTTTCCCGTCC+AGG	+	Chr7:2161082-2161101	None:intergenic	55.0%
	TCCCGTCCAGGATGAAACTG+TGG	+	Chr7:2161070-2161089	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	2160808	2161616	2160808	ID=MsG0780036081.01;Name=MsG0780036081.01
Chr7	mRNA	2160808	2161616	2160808	ID=MsG0780036081.01.T01;Parent=MsG0780036081.01;Name=MsG0780036081.01.T01;_AED=0.36;_eAED=0.44;_QI=0\|0\|0\|1\|1\|1\|3\|0\|177
Chr7	exon	2161370	2161616	2161370	ID=MsG0780036081.01.T01:exon:38500;Parent=MsG0780036081.01.T01
Chr7	exon	2160951	2161174	2160951	ID=MsG0780036081.01.T01:exon:38499;Parent=MsG0780036081.01.T01
Chr7	exon	2160808	2160870	2160808	ID=MsG0780036081.01.T01:exon:38498;Parent=MsG0780036081.01.T01
Chr7	CDS	2161370	2161616	2161370	ID=MsG0780036081.01.T01:cds;Parent=MsG0780036081.01.T01
Chr7	CDS	2160951	2161174	2160951	ID=MsG0780036081.01.T01:cds;Parent=MsG0780036081.01.T01
Chr7	CDS	2160808	2160870	2160808	ID=MsG0780036081.01.T01:cds;Parent=MsG0780036081.01.T01

Gene Sequence

>MsG0780036081.01.T01

ATGTCTAAGCAGCCAAAAACATCAACAGTGGAGGTAGATAGGATAAGCGGTTTACCAGACGATATCCTAATTCACATTCTCTCTTCTCTTCCCACCAAACAAGCCTTTCTCACTTCCATTCTTTCAAAGAGATGGAAGCATCTATGGTGTTTTGTTCCAGATATTGACTTTACTGAAACCAAACACTCCGATTCACGCTTATTCGACAAATTCGTTGACTCCATCTTGTGCTTGCGAAAAGCTGCTGACATTAAGTTTGATCAATATGGAGATCTTAAGTGTCTTCTAAAGTATTGTCCAGTTCTTGAAGATCTTCAACTATATCATATATCCCATCTCATTTATCTTGATTCCAACAGATGTTGTGAAACCTTAACAAAGTTGATTAGAGCAGATATTATTGAATGTAAATGCCATGTTCCGATGAAAGCACTTTCAAATGTGGAGTTTCTACGCATAAAACTATACATGACTTTTGACTCTCCTACATTCCATAATTTGACTCATTGGTGCTCAACTACAATTGGGGTATAG

Protein sequence

>MsG0780036081.01.T01

MSKQPKTSTVEVDRISGLPDDILIHILSSLPTKQAFLTSILSKRWKHLWCFVPDIDFTETKHSDSRLFDKFVDSILCLRKAADIKFDQYGDLKCLLKYCPVLEDLQLYHISHLIYLDSNRCCETLTKLIRADIIECKCHVPMKALSNVEFLRIKLYMTFDSPTFHNLTHWCSTTIGV*