AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028638.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028638.01.T01 MTR_7g056287 56.452 372 158 3 2 369 1 372 2.36e-141 406
MsG0580028638.01.T01 MTR_7g056277 56.720 372 157 3 2 369 257 628 1.61e-139 410
MsG0580028638.01.T01 MTR_7g060470 43.577 397 189 12 2 368 1 392 2.12e-86 267
MsG0580028638.01.T01 MTR_7g007080 41.388 389 192 12 1 366 1 376 4.90e-77 243
MsG0580028638.01.T01 MTR_1g041245 37.403 385 211 13 4 368 11 385 1.17e-63 208
MsG0580028638.01.T01 MTR_7g032380 35.000 380 197 14 4 368 11 355 7.72e-58 192
MsG0580028638.01.T01 MTR_1g085120 36.573 391 218 14 2 370 90 472 2.14e-55 189
MsG0580028638.01.T01 MTR_7g033990 37.288 354 198 10 4 341 11 356 5.32e-55 186
MsG0580028638.01.T01 MTR_1g085120 36.573 391 218 14 2 370 165 547 7.98e-55 189
MsG0580028638.01.T01 MTR_1g108820 36.990 392 204 15 4 367 8 384 3.65e-54 183
MsG0580028638.01.T01 MTR_7g098510 34.555 382 224 9 4 368 18 390 3.82e-54 183
MsG0580028638.01.T01 MTR_6g022500 34.974 386 225 15 4 371 101 478 8.57e-54 184
MsG0580028638.01.T01 MTR_3g107100 34.975 406 217 16 3 371 10 405 3.73e-52 179
MsG0580028638.01.T01 MTR_7g056433 34.536 388 224 12 2 368 10 388 8.51e-52 177
MsG0580028638.01.T01 MTR_7g032370 34.324 370 206 12 16 368 2 351 2.94e-51 175
MsG0580028638.01.T01 MTR_7g056307 87.640 89 11 0 278 366 1 89 1.16e-50 166
MsG0580028638.01.T01 MTR_0543s0010 33.867 375 229 8 3 368 85 449 2.56e-50 175
MsG0580028638.01.T01 MTR_3g108560 33.684 380 228 10 3 368 19 388 3.79e-50 173
MsG0580028638.01.T01 MTR_1g066830 33.679 386 228 12 4 368 8 386 4.70e-50 172
MsG0580028638.01.T01 MTR_7g034115 35.511 352 205 12 4 340 11 355 6.45e-50 172
MsG0580028638.01.T01 MTR_3g108150 35.385 390 213 10 3 368 12 386 2.06e-49 171
MsG0580028638.01.T01 MTR_7g115270 31.980 394 235 10 2 366 10 399 2.56e-49 171
MsG0580028638.01.T01 MTR_4g039440 34.704 389 223 12 4 370 34 413 6.77e-49 170
MsG0580028638.01.T01 MTR_7g033915 32.898 383 210 12 4 368 11 364 1.13e-48 168
MsG0580028638.01.T01 MTR_5g073420 33.242 364 208 12 4 349 11 357 1.40e-48 169
MsG0580028638.01.T01 MTR_3g036250 33.245 379 217 11 4 366 5 363 1.76e-48 167
MsG0580028638.01.T01 MTR_8g085430 32.898 383 179 14 4 371 11 330 2.53e-48 166
MsG0580028638.01.T01 MTR_7g026500 34.500 400 208 17 4 368 14 394 5.68e-48 167
MsG0580028638.01.T01 MTR_0492s0020 33.795 361 220 8 3 354 85 435 4.51e-47 166
MsG0580028638.01.T01 MTR_7g088260 34.884 387 218 12 3 369 90 462 8.37e-47 166
MsG0580028638.01.T01 MTR_7g098480 35.000 380 223 8 4 368 18 388 1.94e-46 165
MsG0580028638.01.T01 MTR_3g040700 32.759 348 197 10 4 333 43 371 2.12e-46 164
MsG0580028638.01.T01 MTR_5g058100 34.456 386 225 13 4 370 9 385 2.32e-46 163
MsG0580028638.01.T01 MTR_6g011460 34.286 385 227 12 4 370 46 422 6.83e-46 162
MsG0580028638.01.T01 MTR_5g045170 33.333 384 226 12 6 368 16 390 1.17e-45 161
MsG0580028638.01.T01 MTR_1089s0010 33.766 385 225 14 4 370 8 380 4.85e-45 159
MsG0580028638.01.T01 MTR_7g098570 34.293 382 225 9 4 368 20 392 3.11e-44 159
MsG0580028638.01.T01 MTR_5g058000 34.392 378 230 13 4 371 8 377 3.25e-44 157
MsG0580028638.01.T01 MTR_2g007400 31.281 406 225 17 2 367 10 401 9.29e-43 154
MsG0580028638.01.T01 MTR_3g467400 33.676 389 209 14 4 368 3 366 1.39e-42 152
MsG0580028638.01.T01 MTR_5g008920 32.447 376 232 11 6 368 14 380 1.45e-42 152
MsG0580028638.01.T01 MTR_1g108800 35.279 377 187 10 4 367 8 340 2.84e-42 150
MsG0580028638.01.T01 MTR_6g045333 33.165 395 224 14 4 368 61 445 3.66e-42 153
MsG0580028638.01.T01 MTR_7g021990 34.225 374 216 11 4 356 48 412 5.82e-42 152
MsG0580028638.01.T01 MTR_2g007450 32.933 416 214 15 4 367 16 418 8.07e-42 151
MsG0580028638.01.T01 MTR_3g105060 31.733 375 230 11 4 368 14 372 1.86e-41 149
MsG0580028638.01.T01 MTR_7g021950 34.225 374 216 11 4 356 48 412 2.68e-41 152
MsG0580028638.01.T01 MTR_5g007410 31.733 375 229 9 6 358 28 397 2.85e-41 150
MsG0580028638.01.T01 MTR_7g022105 33.693 371 218 11 4 354 49 411 6.78e-41 149
MsG0580028638.01.T01 MTR_7g034120 35.783 313 170 10 77 370 9 309 7.30e-41 146
MsG0580028638.01.T01 MTR_6g040270 33.079 393 227 15 1 369 1 381 1.52e-40 147
MsG0580028638.01.T01 MTR_1g085120 38.095 294 155 12 2 274 177 464 6.65e-40 147
MsG0580028638.01.T01 MTR_5g083890 31.343 402 221 15 3 361 5 394 7.37e-40 148
MsG0580028638.01.T01 MTR_7g055943 31.959 388 238 12 4 370 40 422 8.50e-40 146
MsG0580028638.01.T01 MTR_7g075820 30.827 399 231 13 3 367 5 392 2.28e-39 144
MsG0580028638.01.T01 MTR_3g099830 32.152 395 203 16 4 367 12 372 1.28e-38 142
MsG0580028638.01.T01 MTR_3g023630 32.410 361 221 10 4 350 8 359 3.51e-38 140
MsG0580028638.01.T01 MTR_2g036470 32.051 390 228 13 4 366 14 393 4.16e-38 141
MsG0580028638.01.T01 MTR_7g056420 32.898 383 206 14 2 363 7 359 7.29e-38 145
MsG0580028638.01.T01 MTR_7g056430 32.898 383 206 14 2 363 7 359 8.87e-38 145
MsG0580028638.01.T01 MTR_5g008950 32.361 377 228 14 6 368 1 364 9.01e-38 140
MsG0580028638.01.T01 MTR_5g045510 32.376 383 216 13 4 367 12 370 1.01e-37 139
MsG0580028638.01.T01 MTR_3g082890 33.075 387 216 13 4 356 97 474 1.10e-37 141
MsG0580028638.01.T01 MTR_5g073370 32.300 387 222 14 4 365 5 376 1.15e-37 139
MsG0580028638.01.T01 MTR_1g053025 31.818 396 226 18 4 366 2 386 3.82e-37 138
MsG0580028638.01.T01 MTR_3g107120 31.218 394 226 12 4 366 9 388 5.71e-37 138
MsG0580028638.01.T01 MTR_3g107160 31.701 388 228 13 3 366 6 380 6.00e-37 137
MsG0580028638.01.T01 MTR_1g108820 37.374 297 150 11 4 274 8 294 8.86e-37 136
MsG0580028638.01.T01 MTR_7g056020 32.976 373 205 11 3 356 15 361 4.06e-36 139
MsG0580028638.01.T01 MTR_2g005990 29.676 401 238 13 1 367 3 393 4.74e-36 135
MsG0580028638.01.T01 MTR_5g039490 31.842 380 220 12 4 368 20 375 7.77e-36 134
MsG0580028638.01.T01 MTR_3g082890 31.368 424 211 14 4 356 17 431 2.66e-35 134
MsG0580028638.01.T01 MTR_5g039450 31.844 358 191 14 4 336 6 335 4.00e-35 132
MsG0580028638.01.T01 MTR_1g107385 30.273 403 231 14 3 367 31 421 4.46e-35 133
MsG0580028638.01.T01 MTR_7g034110 34.125 337 163 9 4 327 11 301 9.67e-35 131
MsG0580028638.01.T01 MTR_3g071850 31.755 359 213 12 4 336 24 376 2.41e-34 134
MsG0580028638.01.T01 MTR_0009s0080 29.815 379 239 9 6 362 20 393 3.64e-34 131
MsG0580028638.01.T01 MTR_7g007340 31.429 385 193 17 4 363 13 351 8.51e-33 126
MsG0580028638.01.T01 MTR_3g108560 33.333 288 169 9 3 277 19 296 1.00e-32 125
MsG0580028638.01.T01 MTR_6g044572 30.392 408 223 13 4 370 2 389 3.10e-32 125
MsG0580028638.01.T01 MTR_6g022360 30.343 379 236 9 4 368 43 407 6.75e-32 124
MsG0580028638.01.T01 MTR_7g083740 30.469 384 214 15 4 368 17 366 5.07e-31 121
MsG0580028638.01.T01 MTR_6g044560 31.111 405 224 15 4 370 178 565 7.54e-31 123
MsG0580028638.01.T01 MTR_5g073340 30.631 333 180 10 4 315 8 310 7.85e-31 119
MsG0580028638.01.T01 MTR_5g031970 30.728 371 216 11 4 366 16 353 1.00e-30 120
MsG0580028638.01.T01 MTR_3g026920 29.602 402 230 15 2 366 17 402 2.14e-30 120
MsG0580028638.01.T01 MTR_3g109982 36.885 244 134 7 126 355 224 461 2.21e-30 123
MsG0580028638.01.T01 MTR_3g109982 38.172 186 107 3 4 186 13 193 1.38e-23 102
MsG0580028638.01.T01 MTR_5g063950 28.125 384 229 11 4 369 8 362 3.81e-30 119
MsG0580028638.01.T01 MTR_2g007500 30.499 341 184 10 4 313 14 332 6.33e-30 117
MsG0580028638.01.T01 MTR_5g061680 31.488 289 157 10 1 276 8 268 1.14e-29 117
MsG0580028638.01.T01 MTR_5g039470 31.250 336 199 11 20 332 1 327 1.32e-29 116
MsG0580028638.01.T01 MTR_3g087260 35.333 300 166 11 87 368 167 456 1.68e-29 118
MsG0580028638.01.T01 MTR_3g087260 36.224 196 101 3 4 195 12 187 1.53e-22 99.0
MsG0580028638.01.T01 MTR_5g013500 28.351 388 227 14 2 368 7 364 2.08e-29 117
MsG0580028638.01.T01 MTR_7g056447 40.513 195 105 6 4 194 9 196 3.07e-29 115
MsG0580028638.01.T01 MTR_2g007360 29.397 398 210 19 4 367 12 372 8.39e-29 115
MsG0580028638.01.T01 MTR_7g114710 30.769 351 196 12 4 336 13 334 1.19e-28 114
MsG0580028638.01.T01 MTR_4g080610 29.428 367 206 9 6 355 14 344 1.39e-27 112
MsG0580028638.01.T01 MTR_4g098590 31.522 368 201 15 6 336 1 354 3.85e-27 110
MsG0580028638.01.T01 MTR_2g008320 28.715 397 225 15 4 366 52 424 3.87e-27 112
MsG0580028638.01.T01 MTR_5g065100 28.184 369 229 7 6 368 10 348 7.15e-27 111
MsG0580028638.01.T01 MTR_4g134150 35.829 187 106 5 3 185 13 189 1.67e-26 105
MsG0580028638.01.T01 MTR_6g022520 35.077 325 176 14 69 370 2 314 1.83e-26 107
MsG0580028638.01.T01 MTR_5g012840 28.097 331 176 9 26 342 11 293 2.36e-26 107
MsG0580028638.01.T01 MTR_7g007370 31.786 280 137 7 4 276 17 249 6.62e-26 107
MsG0580028638.01.T01 MTR_8g467800 25.566 442 251 11 2 370 18 454 1.20e-25 107
MsG0580028638.01.T01 MTR_2g008310 28.412 359 214 12 4 336 2 343 5.48e-25 105
MsG0580028638.01.T01 MTR_3g095600 36.100 241 116 11 1 231 1 213 6.16e-25 103
MsG0580028638.01.T01 MTR_3g110010 38.172 186 107 3 4 186 13 193 2.00e-23 102
MsG0580028638.01.T01 MTR_3g110010 38.415 164 82 6 126 276 224 381 7.18e-19 88.6
MsG0580028638.01.T01 MTR_7g033945 36.905 168 86 4 4 158 11 171 4.15e-23 95.5
MsG0580028638.01.T01 MTR_8g077460 27.110 391 235 15 3 368 9 374 3.44e-22 97.1
MsG0580028638.01.T01 MTR_8g062010 27.126 435 233 19 4 368 9 429 4.99e-22 97.1
MsG0580028638.01.T01 MTR_7g075800 25.758 396 218 16 2 332 7 391 2.27e-21 96.3
MsG0580028638.01.T01 MTR_2g007550 26.209 393 186 12 4 366 14 332 2.85e-20 91.3
MsG0580028638.01.T01 MTR_1g059860 29.391 279 137 9 101 328 41 310 9.10e-20 89.4
MsG0580028638.01.T01 MTR_5g084070 26.651 424 228 15 4 361 13 419 1.35e-19 90.1
MsG0580028638.01.T01 MTR_5g054920 35.859 198 102 9 169 349 3 192 1.99e-19 85.5
MsG0580028638.01.T01 MTR_1g038710 24.586 423 239 12 4 348 19 439 4.31e-19 88.6
MsG0580028638.01.T01 MTR_5g061410 30.208 288 157 8 6 277 7 266 4.32e-19 86.7
MsG0580028638.01.T01 MTR_4g032730 25.926 459 239 21 4 368 15 466 5.25e-19 88.6
MsG0580028638.01.T01 MTR_2g007530 27.851 377 201 15 2 366 17 334 7.69e-19 87.0
MsG0580028638.01.T01 MTR_2g007090 33.188 229 123 11 148 368 87 293 9.11e-19 85.9
MsG0580028638.01.T01 MTR_8g062310 28.266 421 228 20 4 368 25 427 1.33e-18 87.0
MsG0580028638.01.T01 MTR_8g062080 27.689 437 229 17 4 368 23 444 4.38e-18 85.9
MsG0580028638.01.T01 MTR_3g114200 37.241 145 83 4 4 144 19 159 6.94e-18 80.5
MsG0580028638.01.T01 MTR_8g070950 26.742 445 222 20 3 368 14 433 1.54e-17 84.0
MsG0580028638.01.T01 MTR_7g068570 34.194 155 91 5 4 151 5 155 8.52e-17 78.2
MsG0580028638.01.T01 MTR_7g033940 36.923 130 73 4 6 130 96 221 1.03e-15 75.9
MsG0580028638.01.T01 MTR_8g058970 25.974 462 241 22 4 368 19 476 1.26e-15 78.6
MsG0580028638.01.T01 MTR_4g056020 26.241 423 212 18 4 341 9 416 1.75e-15 77.8
MsG0580028638.01.T01 MTR_8g014260 25.959 443 244 16 3 368 15 450 1.81e-15 77.8
MsG0580028638.01.T01 MTR_5g080710 25.463 432 244 16 4 368 33 453 2.02e-15 77.8
MsG0580028638.01.T01 MTR_6g013160 29.375 320 158 9 4 276 52 350 2.69e-15 77.0
MsG0580028638.01.T01 MTR_6g022390 35.338 133 75 4 1 124 2 132 2.72e-15 72.8
MsG0580028638.01.T01 MTR_5g092960 23.516 455 246 15 4 368 19 461 2.73e-15 77.4
MsG0580028638.01.T01 MTR_7g098590 42.105 95 53 1 4 98 18 110 3.02e-15 72.4
MsG0580028638.01.T01 MTR_8g062270 25.336 446 244 16 4 368 16 453 1.70e-14 75.1
MsG0580028638.01.T01 MTR_8g468760 25.000 420 250 17 4 368 9 418 2.37e-14 74.3
MsG0580028638.01.T01 MTR_8g468840 25.000 424 241 14 2 349 12 434 2.58e-14 74.3
MsG0580028638.01.T01 MTR_8g058965 31.401 207 117 8 2 184 11 216 2.75e-14 74.3
MsG0580028638.01.T01 MTR_4g056030 25.721 416 223 17 4 341 9 416 6.81e-14 73.2
MsG0580028638.01.T01 MTR_4g093690 29.592 196 109 6 4 182 18 201 6.93e-14 71.6
MsG0580028638.01.T01 MTR_6g029350 28.704 216 117 10 172 369 2 198 9.63e-14 70.5
MsG0580028638.01.T01 MTR_2g083840 24.379 443 250 19 4 368 21 456 1.16e-13 72.4
MsG0580028638.01.T01 MTR_7g056417 34.722 144 80 4 126 255 11 154 2.43e-13 67.8
MsG0580028638.01.T01 MTR_8g467800 30.159 189 123 4 2 183 18 204 4.84e-13 69.7
MsG0580028638.01.T01 MTR_3g048290 28.571 210 107 9 4 188 23 214 1.17e-12 69.3
MsG0580028638.01.T01 MTR_2g020170 44.578 83 45 1 4 85 22 104 1.21e-12 65.1
MsG0580028638.01.T01 MTR_1377s0010 34.109 129 77 4 214 336 1 127 1.71e-12 64.7
MsG0580028638.01.T01 MTR_1g077420 26.667 285 166 12 1 260 1 267 3.16e-12 66.6
MsG0580028638.01.T01 MTR_7g081290 62.500 48 18 0 4 51 18 65 4.38e-12 65.9
MsG0580028638.01.T01 MTR_2g072530 23.503 451 241 20 4 368 13 445 7.18e-12 67.0
MsG0580028638.01.T01 MTR_7g034090 37.415 147 75 7 1 137 1 140 7.63e-12 66.6
MsG0580028638.01.T01 MTR_3g095640 34.177 158 94 5 4 151 18 175 1.07e-11 63.5
MsG0580028638.01.T01 MTR_3g113782 57.447 47 20 0 4 50 17 63 1.98e-11 60.1
MsG0580028638.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 2.07e-11 64.7
MsG0580028638.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 2.26e-11 65.1
MsG0580028638.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 2.30e-11 64.7
MsG0580028638.01.T01 MTR_2g100590 25.256 293 174 12 4 281 42 304 3.61e-11 64.7
MsG0580028638.01.T01 MTR_2g100590 25.256 293 174 12 4 281 42 304 3.68e-11 65.1
MsG0580028638.01.T01 MTR_2g100590 25.256 293 174 12 4 281 42 304 3.78e-11 64.7
MsG0580028638.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 4.05e-11 64.3
MsG0580028638.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 4.10e-11 64.7
MsG0580028638.01.T01 MTR_3g095630 33.696 184 100 9 199 370 12 185 4.39e-11 62.0
MsG0580028638.01.T01 MTR_5g073400 34.545 110 67 3 78 185 7 113 6.34e-11 60.1
MsG0580028638.01.T01 MTR_2g047858 29.231 195 123 6 4 187 115 305 6.56e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028638.01.T01 AT5G41840 33.645 214 112 8 4 193 14 221 1.84e-26 110
MsG0580028638.01.T01 AT4G10400 28.846 416 236 16 4 368 2 408 3.12e-26 108
MsG0580028638.01.T01 AT4G10400 28.846 416 236 16 4 368 2 408 3.12e-26 108
MsG0580028638.01.T01 AT4G10400 28.846 416 236 16 4 368 2 408 3.12e-26 108
MsG0580028638.01.T01 AT5G56420 26.995 426 240 11 4 368 6 421 5.23e-25 105
MsG0580028638.01.T01 AT5G56420 26.995 426 240 11 4 368 6 421 5.23e-25 105
MsG0580028638.01.T01 AT5G56420 26.995 426 240 11 4 368 6 421 5.23e-25 105
MsG0580028638.01.T01 AT4G14096 28.242 347 166 11 4 275 8 346 8.61e-25 105
MsG0580028638.01.T01 AT4G14096 28.242 347 166 11 4 275 8 346 8.61e-25 105
MsG0580028638.01.T01 AT4G14103 35.714 196 108 9 4 187 8 197 4.14e-24 103
MsG0580028638.01.T01 AT4G14103 35.714 196 108 9 4 187 8 197 6.37e-24 102
MsG0580028638.01.T01 AT4G14103 35.714 196 108 9 4 187 8 197 6.37e-24 102
MsG0580028638.01.T01 AT5G41830 31.019 216 114 7 4 193 13 219 1.61e-23 102
MsG0580028638.01.T01 AT5G56380 25.664 452 234 14 4 368 2 438 3.17e-23 100
MsG0580028638.01.T01 AT5G56380 25.664 452 234 14 4 368 2 438 3.17e-23 100
MsG0580028638.01.T01 AT4G00320 32.407 216 111 8 4 193 13 219 5.41e-23 100
MsG0580028638.01.T01 AT1G78750 25.893 448 237 16 4 366 18 455 7.52e-23 99.8
MsG0580028638.01.T01 AT1G78750 25.893 448 237 16 4 366 18 455 7.52e-23 99.8
MsG0580028638.01.T01 AT4G26340 26.340 429 240 14 4 368 2 418 1.33e-22 99.0
MsG0580028638.01.T01 AT1G69630 26.742 445 230 18 4 366 18 448 4.73e-22 97.4
MsG0580028638.01.T01 AT3G42770 26.698 427 232 14 6 361 1 417 7.78e-22 97.4
MsG0580028638.01.T01 AT3G59200 35.000 200 114 6 4 191 7 202 3.54e-21 94.0
MsG0580028638.01.T01 AT5G56370 25.986 431 241 13 4 368 2 420 4.88e-21 94.4
MsG0580028638.01.T01 AT5G56370 25.986 431 241 13 4 368 2 420 4.88e-21 94.4
MsG0580028638.01.T01 AT3G59200 35.000 200 114 6 4 191 7 202 1.61e-20 93.2
MsG0580028638.01.T01 AT3G59190 33.333 198 105 8 4 182 12 201 1.97e-20 92.0
MsG0580028638.01.T01 AT3G59190 33.838 198 104 8 4 182 12 201 3.15e-20 92.4
MsG0580028638.01.T01 AT3G59240 32.828 198 115 6 4 188 8 200 4.17e-20 92.0
MsG0580028638.01.T01 AT5G56370 28.322 286 179 8 4 279 2 271 6.88e-20 89.7
MsG0580028638.01.T01 AT3G49030 26.207 435 238 17 3 368 20 440 2.03e-19 89.7
MsG0580028638.01.T01 AT4G26350 25.951 447 228 18 4 368 2 427 2.04e-19 89.7
MsG0580028638.01.T01 AT5G53640 30.435 184 114 5 3 181 21 195 2.95e-19 85.9
MsG0580028638.01.T01 AT1G32375 26.107 429 244 14 4 368 2 421 3.54e-19 89.0
MsG0580028638.01.T01 AT1G32375 26.107 429 244 14 4 368 2 421 3.54e-19 89.0
MsG0580028638.01.T01 AT4G00160 25.799 438 250 15 1 370 13 443 9.05e-19 87.8
MsG0580028638.01.T01 AT5G44950 26.608 451 202 21 1 351 1 422 9.16e-19 87.8
MsG0580028638.01.T01 AT4G09920 34.409 186 110 7 4 182 2 182 1.41e-18 85.5
MsG0580028638.01.T01 AT4G09920 34.409 186 110 7 4 182 2 182 1.41e-18 85.5
MsG0580028638.01.T01 AT4G09920 34.409 186 110 7 4 182 2 182 1.41e-18 85.5
MsG0580028638.01.T01 AT4G09920 34.409 186 110 7 4 182 2 182 1.62e-18 85.9
MsG0580028638.01.T01 AT4G09920 34.409 186 110 7 4 182 2 182 1.62e-18 85.9
MsG0580028638.01.T01 AT5G38392 33.175 211 111 8 4 192 2 204 1.76e-18 83.6
MsG0580028638.01.T01 AT3G58880 31.884 207 104 7 4 187 3 195 8.68e-18 84.7
MsG0580028638.01.T01 AT1G66290 31.148 183 114 4 4 182 29 203 1.46e-17 84.3
MsG0580028638.01.T01 AT5G62970 25.111 450 249 16 4 368 2 448 1.54e-17 84.0
MsG0580028638.01.T01 AT3G59210 33.503 197 113 7 4 187 7 198 3.30e-17 83.2
MsG0580028638.01.T01 AT3G59210 33.503 197 113 7 4 187 7 198 3.30e-17 83.2
MsG0580028638.01.T01 AT3G59210 33.503 197 113 7 4 187 7 198 3.30e-17 83.2
MsG0580028638.01.T01 AT3G59210 33.503 197 113 7 4 187 7 198 3.30e-17 83.2
MsG0580028638.01.T01 AT3G59210 33.503 197 113 7 4 187 7 198 3.30e-17 83.2
MsG0580028638.01.T01 AT5G53840 23.963 434 247 12 3 366 17 437 3.63e-17 83.2
MsG0580028638.01.T01 AT1G58310 31.455 213 111 8 4 187 8 214 4.99e-17 82.8
MsG0580028638.01.T01 AT3G52680 26.233 446 236 20 1 370 18 446 5.39e-17 82.4
MsG0580028638.01.T01 AT3G50710 24.419 430 251 13 4 366 2 424 6.04e-17 82.4
MsG0580028638.01.T01 AT3G58860 23.971 413 223 15 4 336 7 408 6.45e-17 82.4
MsG0580028638.01.T01 AT1G06630 26.608 342 184 12 4 278 12 353 1.27e-16 80.9
MsG0580028638.01.T01 AT1G06630 26.608 342 184 12 4 278 12 353 1.27e-16 80.9
MsG0580028638.01.T01 AT2G26030 32.275 189 109 6 4 182 4 183 1.41e-16 81.3
MsG0580028638.01.T01 AT2G26030 32.275 189 109 6 4 182 4 183 1.41e-16 81.3
MsG0580028638.01.T01 AT2G26030 32.275 189 109 6 4 182 4 183 1.51e-16 81.3
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 21 361 1.77e-16 80.9
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 12 352 2.21e-16 80.5
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 12 352 2.21e-16 80.5
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 12 352 2.21e-16 80.5
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 12 352 2.21e-16 80.5
MsG0580028638.01.T01 AT5G38390 36.269 193 102 8 4 188 2 181 2.65e-16 80.5
MsG0580028638.01.T01 AT2G42730 23.282 451 261 17 4 371 5 453 2.78e-16 80.5
MsG0580028638.01.T01 AT1G06630 26.686 341 183 12 4 277 12 352 2.85e-16 80.5
MsG0580028638.01.T01 AT4G13960 33.526 173 94 7 4 161 2 168 2.87e-16 80.5
MsG0580028638.01.T01 AT4G13960 33.526 173 94 7 4 161 2 168 2.87e-16 80.5
MsG0580028638.01.T01 AT5G44940 24.615 390 247 14 4 366 5 374 3.89e-16 79.3
MsG0580028638.01.T01 AT1G51370 30.366 191 105 4 3 182 18 191 3.95e-16 79.3
MsG0580028638.01.T01 AT1G51370 30.366 191 105 4 3 182 18 191 4.66e-16 79.3
MsG0580028638.01.T01 AT1G51370 30.366 191 105 4 3 182 18 191 4.76e-16 79.7
MsG0580028638.01.T01 AT4G00315 32.105 190 113 7 4 182 2 186 7.16e-16 79.0
MsG0580028638.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 9.87e-16 78.6
MsG0580028638.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 9.87e-16 78.6
MsG0580028638.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 9.87e-16 78.6
MsG0580028638.01.T01 AT2G26860 26.716 408 214 18 4 335 2 400 1.01e-15 78.6
MsG0580028638.01.T01 AT2G26860 26.716 408 214 18 4 335 2 400 1.01e-15 78.6
MsG0580028638.01.T01 AT3G03030 36.735 147 76 6 4 138 2 143 1.03e-15 77.8
MsG0580028638.01.T01 AT5G56400 24.494 445 233 17 4 368 33 454 1.29e-15 78.6
MsG0580028638.01.T01 AT3G59230 29.648 199 115 7 4 182 12 205 1.78e-15 78.2
MsG0580028638.01.T01 AT3G59000 33.146 178 96 7 4 163 2 174 1.92e-15 77.8
MsG0580028638.01.T01 AT2G04230 28.873 284 156 10 1 266 10 265 1.97e-15 77.8
MsG0580028638.01.T01 AT4G22280 25.806 434 234 18 4 370 2 414 2.79e-15 77.0
MsG0580028638.01.T01 AT3G03030 36.735 147 76 6 4 138 2 143 4.18e-15 77.0
MsG0580028638.01.T01 AT3G49030 24.350 423 235 16 3 368 20 414 5.01e-15 76.3
MsG0580028638.01.T01 AT1G55660 32.663 199 100 7 4 182 53 237 5.46e-15 75.9
MsG0580028638.01.T01 AT1G55660 32.663 199 100 7 4 182 53 237 7.05e-15 76.3
MsG0580028638.01.T01 AT4G13985 23.725 451 243 17 4 366 19 456 8.02e-15 75.9
MsG0580028638.01.T01 AT3G59170 30.126 239 125 11 4 204 7 241 8.25e-15 75.9
MsG0580028638.01.T01 AT3G03040 31.500 200 116 7 4 187 2 196 9.09e-15 75.9
MsG0580028638.01.T01 AT1G78760 30.526 190 113 5 3 182 15 195 1.75e-14 75.1
MsG0580028638.01.T01 AT5G22670 29.570 186 115 5 4 182 11 187 2.12e-14 74.7
MsG0580028638.01.T01 AT5G60610 26.196 397 217 12 4 336 2 386 2.57e-14 73.9
MsG0580028638.01.T01 AT5G60610 26.196 397 217 12 4 336 2 386 2.57e-14 73.9
MsG0580028638.01.T01 AT3G59160 30.472 233 130 9 4 204 13 245 3.33e-14 73.9
MsG0580028638.01.T01 AT3G59250 32.642 193 88 7 4 188 7 165 4.23e-14 73.6
MsG0580028638.01.T01 AT5G44960 23.559 399 221 16 4 336 5 385 5.06e-14 73.6
MsG0580028638.01.T01 AT2G42720 34.197 193 109 9 4 182 2 190 6.00e-14 73.2
MsG0580028638.01.T01 AT5G56440 24.609 447 236 16 4 368 2 429 7.92e-14 72.8
MsG0580028638.01.T01 AT3G49150 34.158 202 104 9 4 187 16 206 1.01e-13 72.8
MsG0580028638.01.T01 AT5G38386 25.796 314 177 9 4 277 2 299 1.02e-13 72.4
MsG0580028638.01.T01 AT5G38386 25.796 314 177 9 4 277 2 299 1.02e-13 72.4
MsG0580028638.01.T01 AT5G25860 28.897 263 154 11 4 240 12 267 1.04e-13 72.4
MsG0580028638.01.T01 AT1G64540 32.796 186 106 8 6 186 7 178 1.06e-13 72.4
MsG0580028638.01.T01 AT1G64540 32.796 186 106 8 6 186 7 178 1.06e-13 72.4
MsG0580028638.01.T01 AT5G22610 26.279 430 240 20 2 366 16 433 1.25e-13 72.4
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.33e-13 71.6
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.33e-13 71.6
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.33e-13 71.6
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.33e-13 71.6
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 29 209 1.35e-13 72.0
MsG0580028638.01.T01 AT1G06630 30.688 189 119 5 4 180 12 200 1.40e-13 71.2
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.77e-13 71.2
MsG0580028638.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 1.77e-13 71.2
MsG0580028638.01.T01 AT2G27505 32.487 197 95 8 13 180 1 188 1.89e-13 70.9
MsG0580028638.01.T01 AT3G52680 26.627 338 173 14 1 276 18 342 1.91e-13 71.2
MsG0580028638.01.T01 AT5G56560 23.472 409 246 14 5 354 6 406 2.80e-13 71.2
MsG0580028638.01.T01 AT2G29930 30.270 185 115 4 4 182 12 188 2.84e-13 71.2
MsG0580028638.01.T01 AT2G29930 30.270 185 115 4 4 182 12 188 2.84e-13 71.2
MsG0580028638.01.T01 AT3G51530 26.846 298 182 10 1 281 27 305 3.17e-13 71.2
MsG0580028638.01.T01 AT1G19070 43.902 82 46 0 4 85 2 83 4.26e-13 64.7
MsG0580028638.01.T01 AT5G53635 30.108 186 115 5 6 183 2 180 4.73e-13 70.5
MsG0580028638.01.T01 AT5G02930 30.544 239 142 11 4 234 28 250 5.43e-13 70.5
MsG0580028638.01.T01 AT5G38396 32.683 205 100 8 4 182 2 194 6.07e-13 70.1
MsG0580028638.01.T01 AT5G22700 30.890 191 116 5 4 187 43 224 6.11e-13 70.1
MsG0580028638.01.T01 AT5G22660 29.032 186 118 5 3 182 12 189 6.70e-13 69.3
MsG0580028638.01.T01 AT3G60040 29.146 199 121 4 4 182 13 211 7.24e-13 70.5
MsG0580028638.01.T01 AT5G22660 29.032 186 118 5 3 182 12 189 7.46e-13 70.1
MsG0580028638.01.T01 AT5G22700 30.890 191 116 5 4 187 6 187 7.54e-13 69.7
MsG0580028638.01.T01 AT5G22700 30.890 191 116 5 4 187 6 187 7.54e-13 69.7
MsG0580028638.01.T01 AT5G22700 30.890 191 116 5 4 187 6 187 7.54e-13 69.7
MsG0580028638.01.T01 AT5G22700 30.890 191 116 5 4 187 6 187 7.54e-13 69.7
MsG0580028638.01.T01 AT5G22700 31.250 192 114 7 4 187 43 224 7.87e-13 70.1
MsG0580028638.01.T01 AT3G44080 23.724 392 252 16 6 367 9 383 8.99e-13 69.3
MsG0580028638.01.T01 AT1G78840 24.186 430 246 15 9 366 11 432 9.01e-13 69.7
MsG0580028638.01.T01 AT1G78840 24.186 430 246 15 9 366 11 432 9.01e-13 69.7
MsG0580028638.01.T01 AT5G22730 29.381 194 128 4 3 191 27 216 9.87e-13 69.7
MsG0580028638.01.T01 AT5G22730 29.381 194 128 4 3 191 27 216 9.87e-13 69.7
MsG0580028638.01.T01 AT3G60040 29.146 199 121 4 4 182 232 430 1.00e-12 70.1
MsG0580028638.01.T01 AT3G60040 29.146 199 121 4 4 182 233 431 1.01e-12 70.1
MsG0580028638.01.T01 AT3G60040 29.000 200 122 4 4 183 230 429 1.03e-12 70.1
MsG0580028638.01.T01 AT3G60040 29.000 200 122 4 4 183 232 431 1.06e-12 69.7
MsG0580028638.01.T01 AT5G50270 25.238 420 227 15 4 350 2 407 1.15e-12 69.3
MsG0580028638.01.T01 AT5G22730 29.381 194 128 4 3 191 27 216 1.18e-12 68.9
MsG0580028638.01.T01 AT3G59000 33.333 123 68 3 4 117 2 119 1.30e-12 68.6
MsG0580028638.01.T01 AT5G35995 32.105 190 107 7 4 182 5 183 1.38e-12 69.3
MsG0580028638.01.T01 AT5G35995 32.105 190 107 7 4 182 5 183 1.38e-12 69.3
MsG0580028638.01.T01 AT5G22610 31.959 194 112 8 2 182 16 202 2.51e-12 68.6
MsG0580028638.01.T01 AT3G58980 23.851 457 235 18 4 366 2 439 2.57e-12 68.6
MsG0580028638.01.T01 AT1G48400 30.476 210 114 9 4 196 10 204 2.70e-12 68.2
MsG0580028638.01.T01 AT3G58900 27.053 207 123 6 4 192 2 198 2.77e-12 67.4
MsG0580028638.01.T01 AT5G56690 30.481 187 113 7 6 180 4 185 3.02e-12 67.8
MsG0580028638.01.T01 AT1G66300 28.729 181 124 3 4 182 29 206 3.09e-12 68.2
MsG0580028638.01.T01 AT3G58900 27.053 207 123 6 4 192 2 198 3.21e-12 67.4
MsG0580028638.01.T01 AT3G58900 27.053 207 123 6 4 192 2 198 3.21e-12 67.4
MsG0580028638.01.T01 AT1G48400 30.476 210 114 9 4 196 10 204 3.23e-12 68.2
MsG0580028638.01.T01 AT5G41630 29.412 204 109 7 4 182 12 205 3.53e-12 67.8
MsG0580028638.01.T01 AT4G27050 28.099 242 136 6 1 209 1 237 3.85e-12 67.8
MsG0580028638.01.T01 AT4G27050 28.099 242 136 6 1 209 1 237 3.85e-12 67.8
MsG0580028638.01.T01 AT4G27050 28.099 242 136 6 1 209 1 237 3.85e-12 67.8
MsG0580028638.01.T01 AT4G27050 28.099 242 136 6 1 209 1 237 3.85e-12 67.8
MsG0580028638.01.T01 AT4G27050 28.099 242 136 6 1 209 1 237 3.85e-12 67.8
MsG0580028638.01.T01 AT5G44980 30.928 194 116 8 1 183 1 187 3.89e-12 67.8
MsG0580028638.01.T01 AT5G44980 30.928 194 116 8 1 183 1 187 3.89e-12 67.8
MsG0580028638.01.T01 AT3G58900 25.758 264 166 8 4 248 2 254 4.02e-12 67.8
MsG0580028638.01.T01 AT5G18780 24.215 446 239 15 3 366 10 438 4.60e-12 67.4
MsG0580028638.01.T01 AT5G18780 24.215 446 239 15 3 366 10 438 4.60e-12 67.4
MsG0580028638.01.T01 AT4G22280 31.579 190 108 7 4 182 2 180 5.36e-12 66.6
MsG0580028638.01.T01 AT3G58920 30.457 197 111 7 4 180 2 192 5.47e-12 67.4
MsG0580028638.01.T01 AT5G44980 30.928 194 116 8 1 183 1 187 6.04e-12 66.2
MsG0580028638.01.T01 AT5G44980 30.928 194 116 8 1 183 1 187 6.04e-12 66.2
MsG0580028638.01.T01 AT3G58940 26.104 249 139 10 4 226 2 231 6.22e-12 67.4
MsG0580028638.01.T01 AT3G58940 26.104 249 139 10 4 226 2 231 6.22e-12 67.4
MsG0580028638.01.T01 AT3G44810 24.208 442 241 15 6 362 9 441 6.77e-12 67.0
MsG0580028638.01.T01 AT5G18770 23.990 421 218 16 3 336 23 428 8.75e-12 66.6
MsG0580028638.01.T01 AT3G44090 21.635 416 253 11 6 362 26 427 9.30e-12 66.6
MsG0580028638.01.T01 AT5G44490 27.919 197 110 5 3 181 16 198 1.09e-11 66.2
MsG0580028638.01.T01 AT1G66310 28.729 181 124 3 4 182 19 196 1.21e-11 66.2
MsG0580028638.01.T01 AT5G44490 27.778 198 111 5 3 182 16 199 1.41e-11 66.2
MsG0580028638.01.T01 AT3G58820 26.433 314 170 12 4 277 2 294 1.52e-11 65.9
MsG0580028638.01.T01 AT3G58950 40.476 84 47 2 4 85 2 84 1.60e-11 65.9
MsG0580028638.01.T01 AT5G44850 27.035 344 222 14 42 369 1 331 1.98e-11 65.1
MsG0580028638.01.T01 AT5G02920 30.705 241 140 12 3 234 27 249 2.79e-11 63.9
MsG0580028638.01.T01 AT1G66320 21.346 431 255 12 9 366 35 454 3.02e-11 65.1
MsG0580028638.01.T01 AT5G22720 31.282 195 106 7 3 182 22 203 4.41e-11 64.7
MsG0580028638.01.T01 AT1G52650 32.955 176 92 8 4 161 2 169 4.84e-11 64.3
MsG0580028638.01.T01 AT3G58960 29.293 198 116 6 4 187 2 189 4.98e-11 64.3
MsG0580028638.01.T01 AT4G15060 27.347 245 151 9 4 230 172 407 8.34e-11 63.9
MsG0580028638.01.T01 AT4G15060 27.347 245 151 9 4 230 26 261 9.72e-11 63.5

Find 74 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCAGTTTCTTCTCTTTCT+TGG 0.152095 5:+83964202 MsG0580028638.01.T01:CDS
TCTTGATGGTTGTCCAATTC+TGG 0.223628 5:+83963788 MsG0580028638.01.T01:CDS
TATATATTCGTACCTCTTCT+AGG 0.246928 5:-83963965 None:intergenic
AAACTAATATTCTTTCAAAA+AGG 0.269088 5:+83963355 MsG0580028638.01.T01:CDS
GGAGCCAAGTGTTATTAAAA+AGG 0.270444 5:-83962427 None:intergenic
AGTATGATGCAGAGTTTAAA+AGG 0.282133 5:+83963856 MsG0580028638.01.T01:CDS
ATGCGTTCAGGAAAGATATC+TGG 0.303500 5:-83964228 None:intergenic
AAGCTCCAAATGCGTCAAAT+TGG 0.310602 5:-83964082 None:intergenic
TGTTGAATTCAACATCTTTA+CGG 0.316450 5:+83964328 MsG0580028638.01.T01:CDS
GCTTCAAAATCCTCCAGAAT+TGG 0.334575 5:-83963801 None:intergenic
AAGCATCTCCTGGGGATTCA+TGG 0.342810 5:-83964376 None:intergenic
TAAATTTGACTTGGTGTGAT+TGG 0.346933 5:+83964573 MsG0580028638.01.T01:three_prime_UTR
TTTGCATTTCAAGCATCTCC+TGG 0.347479 5:-83964386 None:intergenic
CTTAAAACTTTACATTTGAA+TGG 0.351562 5:+83963729 MsG0580028638.01.T01:CDS
AAATGTGAAGAGATGCGTTC+AGG 0.386690 5:-83964240 None:intergenic
TTTGTAGGAGAAACGTTAAC+TGG 0.395085 5:+83964106 MsG0580028638.01.T01:CDS
GTTACTCACCTCAAGAGTTT+CGG 0.396583 5:-83962492 None:intergenic
CGCATTTGGAGCTTATTTGT+AGG 0.403379 5:+83964091 MsG0580028638.01.T01:CDS
TTGCAGACTTCGTGCGGAAA+TGG 0.407014 5:-83963475 None:intergenic
TTACTATTGCAAATTCTTGA+TGG 0.408785 5:+83963774 MsG0580028638.01.T01:CDS
ACGATCATCAAAGTCGAGAT+TGG 0.415862 5:-83963403 None:intergenic
AAGAAATTCAACATTAGAAA+AGG 0.424537 5:-83963940 None:intergenic
GTAGATCTATGGATTTGTTC+CGG 0.424665 5:+83964053 MsG0580028638.01.T01:intron
AACATTGAAAACAGACAGAT+TGG 0.435616 5:-83963907 None:intergenic
TTGCATTTCAAGCATCTCCT+GGG 0.437625 5:-83964385 None:intergenic
ATGTGACAAATGATTTCATC+TGG 0.439083 5:-83963300 None:intergenic
TACCGCCACCCTTGTAAACC+TGG 0.457690 5:-83962401 None:intergenic
CACATGTTGCTGAGCTCACT+GGG 0.460990 5:-83964425 None:intergenic
TCACATGTTGCTGAGCTCAC+TGG 0.463393 5:-83964426 None:intergenic
TTAATAACACTTGGCTCCAC+AGG 0.463935 5:+83962432 MsG0580028638.01.T01:five_prime_UTR
GTTTAAAAGGTTAACCAAGT+TGG 0.466768 5:+83963869 MsG0580028638.01.T01:CDS
TAATTAATCCCAGGTTTACA+AGG 0.469992 5:+83962392 MsG0580028638.01.T01:five_prime_UTR
CATACTCATATGTCGAGTTT+CGG 0.476075 5:-83963839 None:intergenic
CGATCATCAAAGTCGAGATT+GGG 0.483870 5:-83963402 None:intergenic
TGCACTATTGCAAATTATAG+AGG 0.485783 5:+83964270 MsG0580028638.01.T01:CDS
ACATTAGAAAAGGCTTCTAA+AGG 0.496686 5:-83963930 None:intergenic
TCCTGGGGATTCATGGATGG+TGG 0.519792 5:-83964369 None:intergenic
TAGAATTATTAAATTTGACT+TGG 0.522633 5:+83964564 MsG0580028638.01.T01:three_prime_UTR
TGCCGCTGCAGAACGCGGAA+TGG 0.525838 5:+83963581 MsG0580028638.01.T01:CDS
ACAATTAAAATTATGTCTAT+CGG 0.529749 5:-83963625 None:intergenic
TGATGGTTGTCCAATTCTGG+AGG 0.538761 5:+83963791 MsG0580028638.01.T01:CDS
AATGTCTGCCTTGACCAACT+TGG 0.542462 5:-83963883 None:intergenic
AAGGTTAACCAAGTTGGTCA+AGG 0.544767 5:+83963875 MsG0580028638.01.T01:CDS
AGGTAGTATTAATTAATCCC+AGG 0.547174 5:+83962383 MsG0580028638.01.T01:five_prime_UTR
TGCGTTCAGGAAAGATATCT+GGG 0.552690 5:-83964227 None:intergenic
TTCCATTCCGCGTTCTGCAG+CGG 0.554345 5:-83963583 None:intergenic
CTGCAGATTACCGAAAATGA+TGG 0.555462 5:+83964531 MsG0580028638.01.T01:three_prime_UTR
TCCCAGGTTTACAAGGGTGG+CGG 0.564255 5:+83962399 MsG0580028638.01.T01:five_prime_UTR
CTGGCTGACCGAAACTCTTG+AGG 0.566585 5:+83962484 MsG0580028638.01.T01:five_prime_UTR
TGCATTTCAAGCATCTCCTG+GGG 0.570317 5:-83964384 None:intergenic
GTGTTTGATATATGATGTGT+TGG 0.570723 5:+83964128 MsG0580028638.01.T01:CDS
TGAATTTCTTCGCCTAGAAG+AGG 0.572368 5:+83963953 MsG0580028638.01.T01:CDS
AAAAGCGTGGATAAAGTTCA+CGG 0.574246 5:-83963434 None:intergenic
GAATGCAGATGGTTGATGAT+CGG 0.577535 5:+83963265 MsG0580028638.01.T01:intron
AGTTTCTGCCTCAGATGTGA+TGG 0.584108 5:+83963510 MsG0580028638.01.T01:CDS
TCCACCATCCATGAATCCCC+AGG 0.584757 5:+83964368 MsG0580028638.01.T01:CDS
ATCTCCTGGGGATTCATGGA+TGG 0.586261 5:-83964372 None:intergenic
TCGACTTTGATGATCGTCGA+TGG 0.587885 5:+83963409 MsG0580028638.01.T01:CDS
ACCGCCACCCTTGTAAACCT+GGG 0.590378 5:-83962400 None:intergenic
GAAACTGACGTTACAAGTTG+AGG 0.593130 5:-83964189 None:intergenic
CTTTCAACTTGAGAACGACA+AGG 0.596636 5:-83963665 None:intergenic
TGCGTCAAATTGGAAAACTC+CGG 0.598611 5:-83964072 None:intergenic
TAATCCCAGGTTTACAAGGG+TGG 0.599937 5:+83962396 MsG0580028638.01.T01:five_prime_UTR
ATAACACTTGGCTCCACAGG+AGG 0.600571 5:+83962435 MsG0580028638.01.T01:five_prime_UTR
AATTAATCCCAGGTTTACAA+GGG 0.601223 5:+83962393 MsG0580028638.01.T01:five_prime_UTR
TAGAATTACCATCACATCTG+AGG 0.607202 5:-83963518 None:intergenic
GCCATATAAACATATAGTAG+AGG 0.611259 5:+83962363 None:intergenic
GTCATGACATCAAGTTCTAG+TGG 0.642494 5:-83963549 None:intergenic
TTAACTGCCGCTGCAGAACG+CGG 0.648562 5:+83963576 MsG0580028638.01.T01:CDS
TTGGGAATTAAAAGTCGTAG+AGG 0.661173 5:-83963384 None:intergenic
TGAATTCAACATCTTTACGG+AGG 0.662411 5:+83964331 MsG0580028638.01.T01:CDS
AAGAACAAGAGTTCCTCCTG+TGG 0.668727 5:-83962448 None:intergenic
TAGAACTTGATGTCATGACG+TGG 0.743686 5:+83963553 MsG0580028638.01.T01:CDS
TATCGGAAATATGAACATCG+AGG 0.748982 5:-83963608 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATAATAAATTAGAAAAA+TGG - Chr5:83962574-83962593 None:intergenic 10.0%
!! AAACTAATATTCTTTCAAAA+AGG + Chr5:83963355-83963374 MsG0580028638.01.T01:CDS 15.0%
!! AATTAAAAAAATGATAGTCT+TGG - Chr5:83963229-83963248 None:intergenic 15.0%
!! ACAATTAAAATTATGTCTAT+CGG - Chr5:83963628-83963647 None:intergenic 15.0%
!! TAGAATTATTAAATTTGACT+TGG + Chr5:83964564-83964583 MsG0580028638.01.T01:three_prime_UTR 15.0%
!!! ATTAGTTTTAAAAACATCTT+CGG - Chr5:83963343-83963362 None:intergenic 15.0%
!!! TATAAAGATGCATAATTTTT+TGG + Chr5:83962899-83962918 MsG0580028638.01.T01:intron 15.0%
!!! TTTTAACAATTAAAAAAGCA+AGG - Chr5:83962869-83962888 None:intergenic 15.0%
!! AAAATATATAATCACAGAAG+AGG - Chr5:83962637-83962656 None:intergenic 20.0%
!! AAATATATAATCACAGAAGA+GGG - Chr5:83962636-83962655 None:intergenic 20.0%
!! AAGAAATTCAACATTAGAAA+AGG - Chr5:83963943-83963962 None:intergenic 20.0%
!! CTATGTTATTCAATATCTAT+AGG + Chr5:83962936-83962955 MsG0580028638.01.T01:intron 20.0%
!! CTTAAAACTTTACATTTGAA+TGG + Chr5:83963729-83963748 MsG0580028638.01.T01:CDS 20.0%
!!! AAAATATACACCATCATTTT+CGG - Chr5:83964544-83964563 None:intergenic 20.0%
!!! AAATGTAAAGTTTTAAGCAA+GGG - Chr5:83963726-83963745 None:intergenic 20.0%
!!! CATTTTTTTAATTGATCCTT+TGG + Chr5:83963236-83963255 MsG0580028638.01.T01:intron 20.0%
! CTAATATTCTTTCAAAAAGG+TGG + Chr5:83963358-83963377 MsG0580028638.01.T01:CDS 25.0%
! GAATTATATGTGAAGAACAT+CGG - Chr5:83962665-83962684 None:intergenic 25.0%
! TAAATTAGAAAAATGGAGTG+AGG - Chr5:83962567-83962586 None:intergenic 25.0%
! TGTTGAATTCAACATCTTTA+CGG + Chr5:83964328-83964347 MsG0580028638.01.T01:CDS 25.0%
! TTACTATTGCAAATTCTTGA+TGG + Chr5:83963774-83963793 MsG0580028638.01.T01:CDS 25.0%
! TTGAGAAGTAACAAAAAAAG+TGG - Chr5:83962763-83962782 None:intergenic 25.0%
!! TTAATTGATCCTTTGGATTT+TGG + Chr5:83963243-83963262 MsG0580028638.01.T01:intron 25.0%
!! TTGTTGTTATTGTTATTGTC+TGG + Chr5:83963016-83963035 MsG0580028638.01.T01:intron 25.0%
!!! CAAATGTAAAGTTTTAAGCA+AGG - Chr5:83963727-83963746 None:intergenic 25.0%
AACATTGAAAACAGACAGAT+TGG - Chr5:83963910-83963929 None:intergenic 30.0%
AATTAATCCCAGGTTTACAA+GGG + Chr5:83962393-83962412 MsG0580028638.01.T01:five_prime_UTR 30.0%
ACATTAGAAAAGGCTTCTAA+AGG - Chr5:83963933-83963952 None:intergenic 30.0%
ACTTAGCAAATTAGCGAAAT+TGG - Chr5:83964014-83964033 None:intergenic 30.0%
AGGTAGTATTAATTAATCCC+AGG + Chr5:83962383-83962402 MsG0580028638.01.T01:five_prime_UTR 30.0%
AGTATGATGCAGAGTTTAAA+AGG + Chr5:83963856-83963875 MsG0580028638.01.T01:CDS 30.0%
ATGTGACAAATGATTTCATC+TGG - Chr5:83963303-83963322 None:intergenic 30.0%
GTGTTTGATATATGATGTGT+TGG + Chr5:83964128-83964147 MsG0580028638.01.T01:CDS 30.0%
GTTTAAAAGGTTAACCAAGT+TGG + Chr5:83963869-83963888 MsG0580028638.01.T01:CDS 30.0%
TAATTAATCCCAGGTTTACA+AGG + Chr5:83962392-83962411 MsG0580028638.01.T01:five_prime_UTR 30.0%
TATACCATATACAAAAAGCG+TGG - Chr5:83963450-83963469 None:intergenic 30.0%
TATATATTCGTACCTCTTCT+AGG - Chr5:83963968-83963987 None:intergenic 30.0%
TGCACTATTGCAAATTATAG+AGG + Chr5:83964270-83964289 MsG0580028638.01.T01:CDS 30.0%
! AAAAAAAGTGGTAGTGACTA+TGG - Chr5:83962751-83962770 None:intergenic 30.0%
! AGCCAAGTGTTATTAAAAAG+GGG - Chr5:83962428-83962447 None:intergenic 30.0%
! GAGCCAAGTGTTATTAAAAA+GGG - Chr5:83962429-83962448 None:intergenic 30.0%
! TTGTTATTGTTATTGTCTGG+TGG + Chr5:83963019-83963038 MsG0580028638.01.T01:intron 30.0%
! TTTTGTTACCTGTAGATCTA+TGG + Chr5:83964042-83964061 MsG0580028638.01.T01:intron 30.0%
!! GAGTTTATTTTTCTCGACAT+TGG + Chr5:83963751-83963770 MsG0580028638.01.T01:CDS 30.0%
!! TAAATTTGACTTGGTGTGAT+TGG + Chr5:83964573-83964592 MsG0580028638.01.T01:three_prime_UTR 30.0%
!! TTATCCACGCTTTTTGTATA+TGG + Chr5:83963443-83963462 MsG0580028638.01.T01:CDS 30.0%
!! TTTTAAAAACATCTTCGGTC+GGG - Chr5:83963338-83963357 None:intergenic 30.0%
!!! AGAAGAAGTTTTTGAAGCTT+AGG - Chr5:83964162-83964181 None:intergenic 30.0%
!!! GTTTTAAAAACATCTTCGGT+CGG - Chr5:83963339-83963358 None:intergenic 30.0%
ATCACATGTCACACTAGAAT+TGG - Chr5:83963081-83963100 None:intergenic 35.0%
ATCTGCATTCCAAAATCCAA+AGG - Chr5:83963255-83963274 None:intergenic 35.0%
CATACTCATATGTCGAGTTT+CGG - Chr5:83963842-83963861 None:intergenic 35.0%
GAACAAATCCATAGATCTAC+AGG - Chr5:83964053-83964072 None:intergenic 35.0%
GTTACTTCTCAACTATCAGA+GGG + Chr5:83962771-83962790 MsG0580028638.01.T01:intron 35.0%
GTTCTTTCTTCTTCTTCTTC+TGG + Chr5:83962465-83962484 MsG0580028638.01.T01:five_prime_UTR 35.0%
TAGAATTACCATCACATCTG+AGG - Chr5:83963521-83963540 None:intergenic 35.0%
TATCGGAAATATGAACATCG+AGG - Chr5:83963611-83963630 None:intergenic 35.0%
TGAATTCAACATCTTTACGG+AGG + Chr5:83964331-83964350 MsG0580028638.01.T01:CDS 35.0%
TTGGGAATTAAAAGTCGTAG+AGG - Chr5:83963387-83963406 None:intergenic 35.0%
TTTGTAGGAGAAACGTTAAC+TGG + Chr5:83964106-83964125 MsG0580028638.01.T01:CDS 35.0%
! AAAAGCGTGGATAAAGTTCA+CGG - Chr5:83963437-83963456 None:intergenic 35.0%
! AGCCCCTTTTTAATAACACT+TGG + Chr5:83962423-83962442 MsG0580028638.01.T01:five_prime_UTR 35.0%
! GGAGCCAAGTGTTATTAAAA+AGG - Chr5:83962430-83962449 None:intergenic 35.0%
! GTAGATCTATGGATTTGTTC+CGG + Chr5:83964053-83964072 MsG0580028638.01.T01:intron 35.0%
! GTTTTCCAATTTGACGCATT+TGG + Chr5:83964077-83964096 MsG0580028638.01.T01:CDS 35.0%
! TGTTACTTCTCAACTATCAG+AGG + Chr5:83962770-83962789 MsG0580028638.01.T01:intron 35.0%
!!! GTAAAGTTTTAAGCAAGGGA+AGG - Chr5:83963722-83963741 None:intergenic 35.0%
!!! TTTGGATTTTGGAATGCAGA+TGG + Chr5:83963254-83963273 MsG0580028638.01.T01:intron 35.0%
AAATGTGAAGAGATGCGTTC+AGG - Chr5:83964243-83964262 None:intergenic 40.0%
AAGCTCCAAATGCGTCAAAT+TGG - Chr5:83964085-83964104 None:intergenic 40.0%
ACGATCATCAAAGTCGAGAT+TGG - Chr5:83963406-83963425 None:intergenic 40.0%
AGATAGTGCACTTGTATGTG+GGG - Chr5:83962988-83963007 None:intergenic 40.0%
ATGCGTTCAGGAAAGATATC+TGG - Chr5:83964231-83964250 None:intergenic 40.0%
ATTGACGTACGTGTCACAAT+TGG + Chr5:83963154-83963173 MsG0580028638.01.T01:intron 40.0%
CAATGACATTCCCTCCTTAA+CGG + Chr5:83963189-83963208 MsG0580028638.01.T01:intron 40.0%
CGATCATCAAAGTCGAGATT+GGG - Chr5:83963405-83963424 None:intergenic 40.0%
CGTCAGTTTCTTCTCTTTCT+TGG + Chr5:83964202-83964221 MsG0580028638.01.T01:CDS 40.0%
CTGCAGATTACCGAAAATGA+TGG + Chr5:83964531-83964550 MsG0580028638.01.T01:three_prime_UTR 40.0%
CTTTCAACTTGAGAACGACA+AGG - Chr5:83963668-83963687 None:intergenic 40.0%
GAAACTGACGTTACAAGTTG+AGG - Chr5:83964192-83964211 None:intergenic 40.0%
GAGATAGTGCACTTGTATGT+GGG - Chr5:83962989-83963008 None:intergenic 40.0%
GCTTCAAAATCCTCCAGAAT+TGG - Chr5:83963804-83963823 None:intergenic 40.0%
GTTACTCACCTCAAGAGTTT+CGG - Chr5:83962495-83962514 None:intergenic 40.0%
TAGAACTTGATGTCATGACG+TGG + Chr5:83963553-83963572 MsG0580028638.01.T01:CDS 40.0%
TGAATTTCTTCGCCTAGAAG+AGG + Chr5:83963953-83963972 MsG0580028638.01.T01:CDS 40.0%
TGCGTCAAATTGGAAAACTC+CGG - Chr5:83964075-83964094 None:intergenic 40.0%
TGCGTTCAGGAAAGATATCT+GGG - Chr5:83964230-83964249 None:intergenic 40.0%
TTAATAACACTTGGCTCCAC+AGG + Chr5:83962432-83962451 MsG0580028638.01.T01:five_prime_UTR 40.0%
TTGCATTTCAAGCATCTCCT+GGG - Chr5:83964388-83964407 None:intergenic 40.0%
TTTGCATTTCAAGCATCTCC+TGG - Chr5:83964389-83964408 None:intergenic 40.0%
! CGCATTTGGAGCTTATTTGT+AGG + Chr5:83964091-83964110 MsG0580028638.01.T01:CDS 40.0%
! CTGAGGCAGAAACTTTTGAT+AGG - Chr5:83963504-83963523 None:intergenic 40.0%
! GTCATGACATCAAGTTCTAG+TGG - Chr5:83963552-83963571 None:intergenic 40.0%
! TCTTGATGGTTGTCCAATTC+TGG + Chr5:83963788-83963807 MsG0580028638.01.T01:CDS 40.0%
!! AAGGTTAACCAAGTTGGTCA+AGG + Chr5:83963875-83963894 MsG0580028638.01.T01:CDS 40.0%
!! GAATGCAGATGGTTGATGAT+CGG + Chr5:83963265-83963284 MsG0580028638.01.T01:intron 40.0%
AAGAACAAGAGTTCCTCCTG+TGG - Chr5:83962451-83962470 None:intergenic 45.0%
AATGTCTGCCTTGACCAACT+TGG - Chr5:83963886-83963905 None:intergenic 45.0%
ACAAGTGCACTATCTCGACT+TGG + Chr5:83962993-83963012 MsG0580028638.01.T01:intron 45.0%
AGTTTCTGCCTCAGATGTGA+TGG + Chr5:83963510-83963529 MsG0580028638.01.T01:CDS 45.0%
CGAGATAGTGCACTTGTATG+TGG - Chr5:83962990-83963009 None:intergenic 45.0%
CGTACGTGTCACAATTGGAT+TGG + Chr5:83963159-83963178 MsG0580028638.01.T01:intron 45.0%
GCTTATGCACAACATCATCG+AGG - Chr5:83962804-83962823 None:intergenic 45.0%
TAATCCCAGGTTTACAAGGG+TGG + Chr5:83962396-83962415 MsG0580028638.01.T01:five_prime_UTR 45.0%
TATGCACAACATCATCGAGG+AGG - Chr5:83962801-83962820 None:intergenic 45.0%
TGATGGTTGTCCAATTCTGG+AGG + Chr5:83963791-83963810 MsG0580028638.01.T01:CDS 45.0%
TGCATTTCAAGCATCTCCTG+GGG - Chr5:83964387-83964406 None:intergenic 45.0%
! AGGATTTTGCAGACTTCGTG+CGG - Chr5:83963484-83963503 None:intergenic 45.0%
! TCGACTTTGATGATCGTCGA+TGG + Chr5:83963409-83963428 MsG0580028638.01.T01:CDS 45.0%
AAGCATCTCCTGGGGATTCA+TGG - Chr5:83964379-83964398 None:intergenic 50.0%
ACAGAAGAGGGATGCATGCA+AGG - Chr5:83962624-83962643 None:intergenic 50.0%
ACTCCACTTGTGCACCGTTA+AGG - Chr5:83963206-83963225 None:intergenic 50.0%
AGTGCACTTGTATGTGGGGT+CGG - Chr5:83962984-83963003 None:intergenic 50.0%
ATAACACTTGGCTCCACAGG+AGG + Chr5:83962435-83962454 MsG0580028638.01.T01:five_prime_UTR 50.0%
ATCTCCTGGGGATTCATGGA+TGG - Chr5:83964375-83964394 None:intergenic 50.0%
CACATGTTGCTGAGCTCACT+GGG - Chr5:83964428-83964447 None:intergenic 50.0%
CACTTGTGCACCGTTAAGGA+GGG - Chr5:83963202-83963221 None:intergenic 50.0%
CAGAAGAGGGATGCATGCAA+GGG - Chr5:83962623-83962642 None:intergenic 50.0%
TCACATGTTGCTGAGCTCAC+TGG - Chr5:83964429-83964448 None:intergenic 50.0%
TTGCAGACTTCGTGCGGAAA+TGG - Chr5:83963478-83963497 None:intergenic 50.0%
ACCGCCACCCTTGTAAACCT+GGG - Chr5:83962403-83962422 None:intergenic 55.0%
CCACTTGTGCACCGTTAAGG+AGG - Chr5:83963203-83963222 None:intergenic 55.0%
CCTCCTTAACGGTGCACAAG+TGG + Chr5:83963200-83963219 MsG0580028638.01.T01:intron 55.0%
CTGGCTGACCGAAACTCTTG+AGG + Chr5:83962484-83962503 MsG0580028638.01.T01:five_prime_UTR 55.0%
TACCGCCACCCTTGTAAACC+TGG - Chr5:83962404-83962423 None:intergenic 55.0%
TCCACCATCCATGAATCCCC+AGG + Chr5:83964368-83964387 MsG0580028638.01.T01:CDS 55.0%
TCCCAGGTTTACAAGGGTGG+CGG + Chr5:83962399-83962418 MsG0580028638.01.T01:five_prime_UTR 55.0%
TCCTGGGGATTCATGGATGG+TGG - Chr5:83964372-83964391 None:intergenic 55.0%
TGTATGTGGGGTCGGCTACA+TGG - Chr5:83962976-83962995 None:intergenic 55.0%
TTAACTGCCGCTGCAGAACG+CGG + Chr5:83963576-83963595 MsG0580028638.01.T01:CDS 55.0%
TTCCATTCCGCGTTCTGCAG+CGG - Chr5:83963586-83963605 None:intergenic 55.0%
TGCCGCTGCAGAACGCGGAA+TGG + Chr5:83963581-83963600 MsG0580028638.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 83962376 83964595 83962376 ID=MsG0580028638.01;Name=MsG0580028638.01
Chr5 mRNA 83962376 83964595 83962376 ID=MsG0580028638.01.T01;Parent=MsG0580028638.01;Name=MsG0580028638.01.T01;_AED=0.39;_eAED=0.39;_QI=130|1|1|1|0.5|0.66|3|125|371
Chr5 exon 83964057 83964595 83964057 ID=MsG0580028638.01.T01:exon:7;Parent=MsG0580028638.01.T01
Chr5 exon 83963273 83963974 83963273 ID=MsG0580028638.01.T01:exon:6;Parent=MsG0580028638.01.T01
Chr5 exon 83962376 83962505 83962376 ID=MsG0580028638.01.T01:exon:5;Parent=MsG0580028638.01.T01
Chr5 five_prime_UTR 83962376 83962505 83962376 ID=MsG0580028638.01.T01:five_prime_utr;Parent=MsG0580028638.01.T01
Chr5 CDS 83963273 83963974 83963273 ID=MsG0580028638.01.T01:cds;Parent=MsG0580028638.01.T01
Chr5 CDS 83964057 83964470 83964057 ID=MsG0580028638.01.T01:cds;Parent=MsG0580028638.01.T01
Chr5 three_prime_UTR 83964471 83964595 83964471 ID=MsG0580028638.01.T01:three_prime_utr;Parent=MsG0580028638.01.T01
Gene Sequence

>MsG0580028638.01.T01

ATGGTTGATGATCGGATTAGTGCATTGCCAGATGAAATCATTTGTCACATTCTCTCTTTTGTCCCGACCGAAGATGTTTTTAAAACTAATATTCTTTCAAAAAGGTGGAGACCTCTACGACTTTTAATTCCCAATCTCGACTTTGATGATCGTCGATGGAGCCGTGAACTTTATCCACGCTTTTTGTATATGGTATATGCTACCATTTCCGCACGAAGTCTGCAAAATCCTATCAAAAGTTTCTGCCTCAGATGTGATGGTAATTCTATTTACGAGCCACTAGAACTTGATGTCATGACGTGGTTAACTGCCGCTGCAGAACGCGGAATGGAACACCTCGATGTTCATATTTCCGATAGACATAATTTTAATTGTGTTTTTAGCTTCAAAAACCTTGTCGTTCTCAAGTTGAAAGTGATACACATTACAACTACTTTATCAGTTGACCTTCCCTTGCTTAAAACTTTACATTTGAATGGAGTTTATTTTTCTCGACATTGGTTACTATTGCAAATTCTTGATGGTTGTCCAATTCTGGAGGATTTTGAAGCAAAAAATATATTTGTCCGAAACTCGACATATGAGTATGATGCAGAGTTTAAAAGGTTAACCAAGTTGGTCAAGGCAGACATTTCCAATCTGTCTGTTTTCAATGTTCCTTTAGAAGCCTTTTCTAATGTTGAATTTCTTCGCCTAGAAGAGATCTATGGATTTGTTCCGGAGTTTTCCAATTTGACGCATTTGGAGCTTATTTGTAGGAGAAACGTTAACTGGTGTTTGATATATGATGTGTTGGAGAAATGTCCTAAGCTTCAAAAACTTCTTCTTGATATGCCTCAACTTGTAACGTCAGTTTCTTCTCTTTCTTGGTTCCCAGATATCTTTCCTGAACGCATCTCTTCACATTTCAAAGAGTGCACTATTGCAAATTATAGAGGACAACATCATGAGTTGCAATTTGTACAATATATTATGTTGAATTCAACATCTTTACGGAGGATAACAATATGCAGTCCACCATCCATGAATCCCCAGGAGATGCTTGAAATGCAAAAAGAGTTATCGTTCTTCCCAGTGAGCTCAGCAACATGTGAAGTTAATTTTAAATTTGTTTGA

Protein sequence

>MsG0580028638.01.T01

MVDDRISALPDEIICHILSFVPTEDVFKTNILSKRWRPLRLLIPNLDFDDRRWSRELYPRFLYMVYATISARSLQNPIKSFCLRCDGNSIYEPLELDVMTWLTAAAERGMEHLDVHISDRHNFNCVFSFKNLVVLKLKVIHITTTLSVDLPLLKTLHLNGVYFSRHWLLLQILDGCPILEDFEAKNIFVRNSTYEYDAEFKRLTKLVKADISNLSVFNVPLEAFSNVEFLRLEEIYGFVPEFSNLTHLELICRRNVNWCLIYDVLEKCPKLQKLLLDMPQLVTSVSSLSWFPDIFPERISSHFKECTIANYRGQHHELQFVQYIMLNSTSLRRITICSPPSMNPQEMLEMQKELSFFPVSSATCEVNFKFV*