AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008687.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008687.01.T01 MTR_2g048140 92.560 457 33 1 1 457 1 456 0.0 863
MsG0280008687.01.T01 MTR_1g090907 82.276 457 79 2 1 457 1 455 0.0 750
MsG0280008687.01.T01 MTR_1g090903 60.917 458 131 5 1 457 1 411 9.54e-176 498
MsG0280008687.01.T01 MTR_3g448340 36.501 463 273 12 5 454 4 458 3.76e-79 253
MsG0280008687.01.T01 MTR_5g080150 35.961 406 220 7 5 404 3 374 8.53e-70 227
MsG0280008687.01.T01 MTR_3g049530 29.522 481 240 14 5 455 4 415 1.19e-44 161
MsG0280008687.01.T01 MTR_1g071060 73.404 94 25 0 36 129 3 96 3.67e-40 139
MsG0280008687.01.T01 MTR_7g029260 37.931 116 71 1 314 428 44 159 7.49e-18 82.8
MsG0280008687.01.T01 MTR_8g468810 24.008 479 306 18 2 457 20 463 2.51e-15 78.2
MsG0280008687.01.T01 MTR_1g021825 25.000 424 242 20 20 423 101 468 7.10e-13 70.9
MsG0280008687.01.T01 MTR_1g021825 25.000 424 242 20 20 423 30 397 7.46e-13 70.5
MsG0280008687.01.T01 MTR_8g468810 26.006 323 204 12 5 313 23 324 1.04e-12 69.7
MsG0280008687.01.T01 MTR_8g468810 26.101 318 196 12 5 301 23 322 5.36e-12 67.4
MsG0280008687.01.T01 MTR_8g468810 26.032 315 198 12 5 305 23 316 9.80e-12 66.6
MsG0280008687.01.T01 MTR_8g468810 26.316 285 178 11 5 275 23 289 1.43e-11 65.9
MsG0280008687.01.T01 MTR_2g072530 25.620 121 85 2 7 127 13 128 3.49e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008687.01.T01 AT1G56400 31.429 420 265 10 9 414 15 425 1.22e-58 200
MsG0280008687.01.T01 AT5G54820 29.638 469 294 14 9 454 9 464 3.68e-55 191
MsG0280008687.01.T01 AT3G29830 32.035 462 283 17 10 454 11 458 3.93e-54 188
MsG0280008687.01.T01 AT3G29830 31.489 470 276 17 10 454 11 459 7.39e-53 184
MsG0280008687.01.T01 AT3G62230 28.337 427 288 13 6 422 7 425 1.96e-48 172
MsG0280008687.01.T01 AT1G56400 32.378 349 213 9 80 414 45 384 5.98e-48 171
MsG0280008687.01.T01 AT2G17305 31.325 166 106 4 296 456 106 268 3.81e-20 90.5
MsG0280008687.01.T01 AT3G58860 26.287 369 230 16 1 353 1 343 1.29e-15 79.3
MsG0280008687.01.T01 AT1G61330 25.469 373 239 13 6 361 9 359 2.58e-14 75.1
MsG0280008687.01.T01 AT3G28410 23.000 400 258 14 4 392 25 385 1.47e-13 72.8
MsG0280008687.01.T01 AT5G56410 29.032 248 150 9 16 248 12 248 9.35e-12 67.4
MsG0280008687.01.T01 AT5G02920 25.225 222 138 4 10 231 31 224 1.19e-11 65.5
MsG0280008687.01.T01 AT3G59240 25.068 367 233 15 7 353 8 352 3.09e-11 65.9

Find 77 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAATACTTCAAATATTC+TGG 0.116778 2:+36355378 MsG0280008687.01.T01:CDS
AAATAGTTATCTTCCCATTT+TGG 0.155222 2:-36355030 None:intergenic
TTGATTTCTCTGATCCAAAA+TGG 0.187141 2:+36355016 MsG0280008687.01.T01:CDS
ATGTAGACCTTAAGAAATTT+TGG 0.214054 2:+36356064 MsG0280008687.01.T01:CDS
TTGAAGGTGGTAGAAGTAAT+TGG 0.250226 2:+36356126 MsG0280008687.01.T01:CDS
TTTCTTAAGGTCTACATCAT+AGG 0.260201 2:-36356058 None:intergenic
TCTTGAGAAGTGTTGGAATT+TGG 0.276195 2:+36355263 MsG0280008687.01.T01:CDS
GAATTTGGCCAACTTTGATT+TGG 0.278673 2:+36355278 MsG0280008687.01.T01:CDS
TGCACTCAAAGACTTATCTT+TGG 0.307976 2:+36355170 MsG0280008687.01.T01:CDS
TTACTTCAGATATAAATGTT+AGG 0.319721 2:+36355409 MsG0280008687.01.T01:CDS
TCCCTAGCCGCGGCATTAAC+AGG 0.323207 2:+36354899 MsG0280008687.01.T01:CDS
CGGAGAAATCATGAAGGATT+TGG 0.330294 2:-36355500 None:intergenic
TATTTGAAGTATTTAAGATT+TGG 0.333013 2:-36355372 None:intergenic
CGTTTGCAGTTATCTACTTC+AGG 0.345166 2:+36355539 MsG0280008687.01.T01:CDS
TCTTATGCAAGGAAAAGTTT+TGG 0.354339 2:+36356188 MsG0280008687.01.T01:CDS
TATTCTTGTTGTGGCTTCTT+CGG 0.357257 2:-36354725 None:intergenic
CTTCAATGAAAACTTCTTTG+TGG 0.359992 2:+36354801 MsG0280008687.01.T01:CDS
TGTTGCTTTCGCGATACAAC+GGG 0.360442 2:+36354975 MsG0280008687.01.T01:CDS
TTAAATACTTCAAATATTCT+GGG 0.378687 2:+36355379 MsG0280008687.01.T01:CDS
TCATCGACTTTATTACAAAC+TGG 0.385308 2:+36354866 MsG0280008687.01.T01:CDS
ATGCATCAATATGAACTTTG+TGG 0.395344 2:+36355825 MsG0280008687.01.T01:CDS
AATTTGGCCAACTTTGATTT+GGG 0.396324 2:+36355279 MsG0280008687.01.T01:CDS
AGTCATAAGTTCTTCGTTTG+TGG 0.396856 2:-36356157 None:intergenic
GAGTTTGCCAAAATTTCTTA+AGG 0.400757 2:-36356071 None:intergenic
ATATATTAGGTCGTTCCATC+TGG 0.419959 2:+36355741 MsG0280008687.01.T01:intron
GCACTCAAAGACTTATCTTT+GGG 0.421361 2:+36355171 MsG0280008687.01.T01:CDS
ACTGCAAACGGTTAGAATCT+TGG 0.425579 2:-36355526 None:intergenic
TACTTCAGATATAAATGTTA+GGG 0.428980 2:+36355410 MsG0280008687.01.T01:CDS
TCAATGCATGTTTATCAACT+TGG 0.432769 2:+36355081 MsG0280008687.01.T01:CDS
GTTTGAATCTTGAGAAGTGT+TGG 0.441780 2:+36355256 MsG0280008687.01.T01:CDS
CTGTATTCGTGTGGTTTCGA+TGG 0.454150 2:+36355126 MsG0280008687.01.T01:CDS
CTTGTTGTGGCTTCTTCGGA+GGG 0.457187 2:-36354721 None:intergenic
CGTTCCATCTGGAGATGAAC+CGG 0.463128 2:+36355752 MsG0280008687.01.T01:CDS
TGATTTCTCTGATCCAAAAT+GGG 0.463607 2:+36355017 MsG0280008687.01.T01:CDS
TTCTTAAGGTCTACATCATA+GGG 0.468849 2:-36356057 None:intergenic
TTTCAAACCCTCAAACTTGT+GGG 0.469013 2:+36354935 MsG0280008687.01.T01:CDS
ACCACTTGGATTAACAAGAT+TGG 0.469749 2:+36355308 MsG0280008687.01.T01:CDS
ACCTGTTAATGCCGCGGCTA+GGG 0.471379 2:-36354900 None:intergenic
AAGGATGGATATTCTTGTTG+TGG 0.475591 2:-36354734 None:intergenic
TTGTTTCCCCACAAGTTTGA+GGG 0.476639 2:-36354942 None:intergenic
AAGTCCACAAGTTATATTTG+AGG 0.508872 2:+36355902 MsG0280008687.01.T01:CDS
TCTTGTTGTGGCTTCTTCGG+AGG 0.513062 2:-36354722 None:intergenic
ACTTGTTGCTTTCTTATGCA+AGG 0.514283 2:+36356177 MsG0280008687.01.T01:CDS
TTGTGGCTTCTTCGGAGGGT+AGG 0.530760 2:-36354717 None:intergenic
AAAGCACTTTGCATCTTCAC+CGG 0.532263 2:-36355771 None:intergenic
GTTTCAAACCCTCAAACTTG+TGG 0.534217 2:+36354934 MsG0280008687.01.T01:CDS
GTGTTGCTTTCGCGATACAA+CGG 0.535988 2:+36354974 MsG0280008687.01.T01:CDS
GAAACGATTGCAAGAAGAAG+TGG 0.539390 2:-36354691 None:intergenic
AACAAATTAATATTAAGTTG+TGG 0.540079 2:+36356211 MsG0280008687.01.T01:CDS
CTGAAGTAGATAACTGCAAA+CGG 0.540402 2:-36355538 None:intergenic
ATTGTTTCCCCACAAGTTTG+AGG 0.540471 2:-36354943 None:intergenic
AACCTGTTAATGCCGCGGCT+AGG 0.547285 2:-36354901 None:intergenic
TTCATCTCCCAAATCAAAGT+TGG 0.548164 2:-36355286 None:intergenic
TGTATTCGTGTGGTTTCGAT+GGG 0.552112 2:+36355127 MsG0280008687.01.T01:CDS
TCAAAGACTTATCTTTGGGT+CGG 0.555960 2:+36355175 MsG0280008687.01.T01:CDS
CTACATCATAGGGAAGTGTA+TGG 0.558866 2:-36356047 None:intergenic
ACTTGGATTAACAAGATTGG+TGG 0.562210 2:+36355311 MsG0280008687.01.T01:CDS
ACCAATCTTGTTAATCCAAG+TGG 0.566249 2:-36355309 None:intergenic
AACCATGGCAAAAGATAACA+TGG 0.570974 2:+36354645 None:intergenic
TAAATACTTCAAATATTCTG+GGG 0.577798 2:+36355380 MsG0280008687.01.T01:CDS
AAATGTTAGGGCTATAGAAG+AGG 0.577818 2:+36355422 MsG0280008687.01.T01:CDS
CTGACCTCAAATATAACTTG+TGG 0.595453 2:-36355906 None:intergenic
AACGGTTAGAATCTTGGCGG+CGG 0.607837 2:-36355520 None:intergenic
GATTTGGGAGATGAACCACT+TGG 0.617804 2:+36355294 MsG0280008687.01.T01:CDS
GCAAACGGTTAGAATCTTGG+CGG 0.622750 2:-36355523 None:intergenic
TCACTAAAACTGTATTCGTG+TGG 0.627895 2:+36355117 MsG0280008687.01.T01:CDS
TTCAAACCCTCAAACTTGTG+GGG 0.628166 2:+36354936 MsG0280008687.01.T01:CDS
CTTGTGGGGAAACAATTGAA+CGG 0.638699 2:+36354950 MsG0280008687.01.T01:CDS
ATCGCGCACTTCCCTAGCCG+CGG 0.657020 2:+36354889 MsG0280008687.01.T01:CDS
AAGCATTGAGGAAACACTCG+AGG 0.661638 2:-36356093 None:intergenic
TTCACCGGTTCATCTCCAGA+TGG 0.661858 2:-36355756 None:intergenic
GAGAAAACCTGTTAATGCCG+CGG 0.665328 2:-36354906 None:intergenic
GAATCAGAATTCAATGAACG+TGG 0.677780 2:+36355465 MsG0280008687.01.T01:CDS
TGGCGGCGGAGAAATCATGA+AGG 0.685071 2:-36355506 None:intergenic
AAGTTGTGGAATGAAGATGA+CGG 0.698822 2:+36356225 MsG0280008687.01.T01:CDS
GTTGCTTTCGCGATACAACG+GGG 0.735844 2:+36354976 MsG0280008687.01.T01:CDS
GGTAAAGAAGAATTTCGACG+TGG 0.795687 2:+36356246 MsG0280008687.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAGTTATAGTTATA+TGG + Chr2:36355978-36355997 MsG0280008687.01.T01:intron 10.0%
!! TTAAATACTTCAAATATTCT+GGG + Chr2:36355379-36355398 MsG0280008687.01.T01:CDS 15.0%
!!! AACAAATTAATATTAAGTTG+TGG + Chr2:36356211-36356230 MsG0280008687.01.T01:CDS 15.0%
!!! ATGTTGATAACAATTTTTTT+AGG - Chr2:36355221-36355240 None:intergenic 15.0%
!!! TATTTGAAGTATTTAAGATT+TGG - Chr2:36355375-36355394 None:intergenic 15.0%
!!! TGTTGATAACAATTTTTTTA+GGG - Chr2:36355220-36355239 None:intergenic 15.0%
!! AAAAATTGTTATCAACATGT+AGG + Chr2:36355223-36355242 MsG0280008687.01.T01:CDS 20.0%
!! AAGAAAAATGGTTAAAGATA+TGG + Chr2:36354758-36354777 MsG0280008687.01.T01:CDS 20.0%
!! ATTTGCATTGTACATATATT+AGG + Chr2:36355728-36355747 MsG0280008687.01.T01:intron 20.0%
!! CTTAAATACTTCAAATATTC+TGG + Chr2:36355378-36355397 MsG0280008687.01.T01:CDS 20.0%
!! TAAATACTTCAAATATTCTG+GGG + Chr2:36355380-36355399 MsG0280008687.01.T01:CDS 20.0%
!! TACTTCAGATATAAATGTTA+GGG + Chr2:36355410-36355429 MsG0280008687.01.T01:CDS 20.0%
!! TCTCGTTAATGATTAAATAT+GGG + Chr2:36355579-36355598 MsG0280008687.01.T01:intron 20.0%
!! TTACTTCAGATATAAATGTT+AGG + Chr2:36355409-36355428 MsG0280008687.01.T01:CDS 20.0%
!! TTCTCGTTAATGATTAAATA+TGG + Chr2:36355578-36355597 MsG0280008687.01.T01:intron 20.0%
!!! TCTTTAACCATTTTTCTTTA+AGG - Chr2:36354756-36354775 None:intergenic 20.0%
! ATGCTTGAAAAATACTTTGA+AGG + Chr2:36356110-36356129 MsG0280008687.01.T01:CDS 25.0%
! TATCCATCCTTAAAGAAAAA+TGG + Chr2:36354746-36354765 MsG0280008687.01.T01:CDS 25.0%
! TGTTTGCTTGTATATATTAC+AGG + Chr2:36356023-36356042 MsG0280008687.01.T01:intron 25.0%
! TTCAAGATGTGATTATTTGT+TGG + Chr2:36355696-36355715 MsG0280008687.01.T01:intron 25.0%
!! AAATAGTTATCTTCCCATTT+TGG - Chr2:36355033-36355052 None:intergenic 25.0%
!! ATGTAGACCTTAAGAAATTT+TGG + Chr2:36356064-36356083 MsG0280008687.01.T01:CDS 25.0%
!!! AAAGTATTTTTCAAGCATTG+AGG - Chr2:36356108-36356127 None:intergenic 25.0%
!!! TAACCATTTTTCTTTAAGGA+TGG - Chr2:36354752-36354771 None:intergenic 25.0%
AAGTCCACAAGTTATATTTG+AGG + Chr2:36355902-36355921 MsG0280008687.01.T01:CDS 30.0%
ATGCATCAATATGAACTTTG+TGG + Chr2:36355825-36355844 MsG0280008687.01.T01:CDS 30.0%
ATTGCTTGAAAAACTCACAT+TGG + Chr2:36355875-36355894 MsG0280008687.01.T01:CDS 30.0%
CTTCAATGAAAACTTCTTTG+TGG + Chr2:36354801-36354820 MsG0280008687.01.T01:CDS 30.0%
GAGTTTGCCAAAATTTCTTA+AGG - Chr2:36356074-36356093 None:intergenic 30.0%
TCAATGCATGTTTATCAACT+TGG + Chr2:36355081-36355100 MsG0280008687.01.T01:CDS 30.0%
TGATTTCTCTGATCCAAAAT+GGG + Chr2:36355017-36355036 MsG0280008687.01.T01:CDS 30.0%
TTCTTAAGGTCTACATCATA+GGG - Chr2:36356060-36356079 None:intergenic 30.0%
TTGATTTCTCTGATCCAAAA+TGG + Chr2:36355016-36355035 MsG0280008687.01.T01:CDS 30.0%
TTTCTTAAGGTCTACATCAT+AGG - Chr2:36356061-36356080 None:intergenic 30.0%
! AATTTGGCCAACTTTGATTT+GGG + Chr2:36355279-36355298 MsG0280008687.01.T01:CDS 30.0%
! ACTTTTAGTCAAAGCTCAAA+AGG + Chr2:36356278-36356297 MsG0280008687.01.T01:CDS 30.0%
! CTTGAAAAATACTTTGAAGG+TGG + Chr2:36356113-36356132 MsG0280008687.01.T01:CDS 30.0%
! CTTTTAGTCAAAGCTCAAAA+GGG + Chr2:36356279-36356298 MsG0280008687.01.T01:CDS 30.0%
! TCTTATGCAAGGAAAAGTTT+TGG + Chr2:36356188-36356207 MsG0280008687.01.T01:CDS 30.0%
!! TCATCGACTTTATTACAAAC+TGG + Chr2:36354866-36354885 MsG0280008687.01.T01:CDS 30.0%
!! TGGGAAGATAACTATTTTGA+TGG + Chr2:36355036-36355055 MsG0280008687.01.T01:CDS 30.0%
!!! AATGTGAGTTTTTCAAGCAA+TGG - Chr2:36355876-36355895 None:intergenic 30.0%
!!! ATGTGAGTTTTTCAAGCAAT+GGG - Chr2:36355875-36355894 None:intergenic 30.0%
AAATGTTAGGGCTATAGAAG+AGG + Chr2:36355422-36355441 MsG0280008687.01.T01:CDS 35.0%
AAGGATGGATATTCTTGTTG+TGG - Chr2:36354737-36354756 None:intergenic 35.0%
AAGTTGTGGAATGAAGATGA+CGG + Chr2:36356225-36356244 MsG0280008687.01.T01:CDS 35.0%
ACCAATCTTGTTAATCCAAG+TGG - Chr2:36355312-36355331 None:intergenic 35.0%
ACCACTTGGATTAACAAGAT+TGG + Chr2:36355308-36355327 MsG0280008687.01.T01:CDS 35.0%
ACTTGGATTAACAAGATTGG+TGG + Chr2:36355311-36355330 MsG0280008687.01.T01:CDS 35.0%
AGTCATAAGTTCTTCGTTTG+TGG - Chr2:36356160-36356179 None:intergenic 35.0%
ATATATTAGGTCGTTCCATC+TGG + Chr2:36355741-36355760 MsG0280008687.01.T01:intron 35.0%
CTGAAGTAGATAACTGCAAA+CGG - Chr2:36355541-36355560 None:intergenic 35.0%
CTGACCTCAAATATAACTTG+TGG - Chr2:36355909-36355928 None:intergenic 35.0%
GAATCAGAATTCAATGAACG+TGG + Chr2:36355465-36355484 MsG0280008687.01.T01:CDS 35.0%
GAATTTGGCCAACTTTGATT+TGG + Chr2:36355278-36355297 MsG0280008687.01.T01:CDS 35.0%
GCACTCAAAGACTTATCTTT+GGG + Chr2:36355171-36355190 MsG0280008687.01.T01:CDS 35.0%
TCAAAGACTTATCTTTGGGT+CGG + Chr2:36355175-36355194 MsG0280008687.01.T01:CDS 35.0%
TCACTAAAACTGTATTCGTG+TGG + Chr2:36355117-36355136 MsG0280008687.01.T01:CDS 35.0%
TGCACTCAAAGACTTATCTT+TGG + Chr2:36355170-36355189 MsG0280008687.01.T01:CDS 35.0%
TTCATCTCCCAAATCAAAGT+TGG - Chr2:36355289-36355308 None:intergenic 35.0%
TTGAAGGTGGTAGAAGTAAT+TGG + Chr2:36356126-36356145 MsG0280008687.01.T01:CDS 35.0%
TTTCAAACCCTCAAACTTGT+GGG + Chr2:36354935-36354954 MsG0280008687.01.T01:CDS 35.0%
! CATTAACAGGTTTTCTCTCA+CGG + Chr2:36354912-36354931 MsG0280008687.01.T01:CDS 35.0%
! GGGCAAGATTTTCTTAACTT+TGG + Chr2:36355147-36355166 MsG0280008687.01.T01:CDS 35.0%
! GTTTGAATCTTGAGAAGTGT+TGG + Chr2:36355256-36355275 MsG0280008687.01.T01:CDS 35.0%
! TATTCTTGTTGTGGCTTCTT+CGG - Chr2:36354728-36354747 None:intergenic 35.0%
!! ACTTGTTGCTTTCTTATGCA+AGG + Chr2:36356177-36356196 MsG0280008687.01.T01:CDS 35.0%
!! TCTTGAGAAGTGTTGGAATT+TGG + Chr2:36355263-36355282 MsG0280008687.01.T01:CDS 35.0%
ACTGCAAACGGTTAGAATCT+TGG - Chr2:36355529-36355548 None:intergenic 40.0%
ATTGTTTCCCCACAAGTTTG+AGG - Chr2:36354946-36354965 None:intergenic 40.0%
CGGAGAAATCATGAAGGATT+TGG - Chr2:36355503-36355522 None:intergenic 40.0%
CGTTTGCAGTTATCTACTTC+AGG + Chr2:36355539-36355558 MsG0280008687.01.T01:CDS 40.0%
CTTGTGGGGAAACAATTGAA+CGG + Chr2:36354950-36354969 MsG0280008687.01.T01:CDS 40.0%
GAAACGATTGCAAGAAGAAG+TGG - Chr2:36354694-36354713 None:intergenic 40.0%
GGTAAAGAAGAATTTCGACG+TGG + Chr2:36356246-36356265 MsG0280008687.01.T01:CDS 40.0%
GTTTCAAACCCTCAAACTTG+TGG + Chr2:36354934-36354953 MsG0280008687.01.T01:CDS 40.0%
TGTATTCGTGTGGTTTCGAT+GGG + Chr2:36355127-36355146 MsG0280008687.01.T01:CDS 40.0%
TTCAAACCCTCAAACTTGTG+GGG + Chr2:36354936-36354955 MsG0280008687.01.T01:CDS 40.0%
TTGTTTCCCCACAAGTTTGA+GGG - Chr2:36354945-36354964 None:intergenic 40.0%
! AAAGCACTTTGCATCTTCAC+CGG - Chr2:36355774-36355793 None:intergenic 40.0%
! CTACATCATAGGGAAGTGTA+TGG - Chr2:36356050-36356069 None:intergenic 40.0%
CTGTATTCGTGTGGTTTCGA+TGG + Chr2:36355126-36355145 MsG0280008687.01.T01:CDS 45.0%
GAGAAAACCTGTTAATGCCG+CGG - Chr2:36354909-36354928 None:intergenic 45.0%
GATTTGGGAGATGAACCACT+TGG + Chr2:36355294-36355313 MsG0280008687.01.T01:CDS 45.0%
GCAAACGGTTAGAATCTTGG+CGG - Chr2:36355526-36355545 None:intergenic 45.0%
!! AAGCATTGAGGAAACACTCG+AGG - Chr2:36356096-36356115 None:intergenic 45.0%
!! GTGTTGCTTTCGCGATACAA+CGG + Chr2:36354974-36354993 MsG0280008687.01.T01:CDS 45.0%
!! TGTTGCTTTCGCGATACAAC+GGG + Chr2:36354975-36354994 MsG0280008687.01.T01:CDS 45.0%
AACGGTTAGAATCTTGGCGG+CGG - Chr2:36355523-36355542 None:intergenic 50.0%
CGTTCCATCTGGAGATGAAC+CGG + Chr2:36355752-36355771 MsG0280008687.01.T01:CDS 50.0%
! CTTGTTGTGGCTTCTTCGGA+GGG - Chr2:36354724-36354743 None:intergenic 50.0%
! GTTGCTTTCGCGATACAACG+GGG + Chr2:36354976-36354995 MsG0280008687.01.T01:CDS 50.0%
! TCTTGTTGTGGCTTCTTCGG+AGG - Chr2:36354725-36354744 None:intergenic 50.0%
!! TTCACCGGTTCATCTCCAGA+TGG - Chr2:36355759-36355778 None:intergenic 50.0%
AACCTGTTAATGCCGCGGCT+AGG - Chr2:36354904-36354923 None:intergenic 55.0%
ACCTGTTAATGCCGCGGCTA+GGG - Chr2:36354903-36354922 None:intergenic 55.0%
TGGCGGCGGAGAAATCATGA+AGG - Chr2:36355509-36355528 None:intergenic 55.0%
TTGTGGCTTCTTCGGAGGGT+AGG - Chr2:36354720-36354739 None:intergenic 55.0%
TCCCTAGCCGCGGCATTAAC+AGG + Chr2:36354899-36354918 MsG0280008687.01.T01:CDS 60.0%
ATCGCGCACTTCCCTAGCCG+CGG + Chr2:36354889-36354908 MsG0280008687.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 36354649 36356332 36354649 ID=MsG0280008687.01;Name=MsG0280008687.01
Chr2 mRNA 36354649 36356332 36354649 ID=MsG0280008687.01.T01;Parent=MsG0280008687.01;Name=MsG0280008687.01.T01;_AED=0.23;_eAED=0.24;_QI=0|0|0|1|1|1|3|0|457
Chr2 exon 36354649 36355560 36354649 ID=MsG0280008687.01.T01:exon:15468;Parent=MsG0280008687.01.T01
Chr2 exon 36355750 36355923 36355750 ID=MsG0280008687.01.T01:exon:15469;Parent=MsG0280008687.01.T01
Chr2 exon 36356045 36356332 36356045 ID=MsG0280008687.01.T01:exon:15470;Parent=MsG0280008687.01.T01
Chr2 CDS 36354649 36355560 36354649 ID=MsG0280008687.01.T01:cds;Parent=MsG0280008687.01.T01
Chr2 CDS 36355750 36355923 36355750 ID=MsG0280008687.01.T01:cds;Parent=MsG0280008687.01.T01
Chr2 CDS 36356045 36356332 36356045 ID=MsG0280008687.01.T01:cds;Parent=MsG0280008687.01.T01
Gene Sequence

>MsG0280008687.01.T01

ATGGCAAAAGATAACATGGAATTGTTTTCTTCGATACTAGAACCACTTCTTCTTGCAATCGTTTCTTTCCTACCCTCCGAAGAAGCCACAACAAGAATATCCATCCTTAAAGAAAAATGGTTAAAGATATGGCAGTTCGAAGAAAACATCGACTTCAATGAAAACTTCTTTGTGGATTCAACTTCTGATGAAAACAAACAAGAACAAAGAAAAATTTTCATCGACTTTATTACAAACTGGATCGCGCACTTCCCTAGCCGCGGCATTAACAGGTTTTCTCTCACGGTTTCAAACCCTCAAACTTGTGGGGAAACAATTGAACGGTGTGTTGCTTTCGCGATACAACGGGGCGTGAAAGAGTTAATTCTTGATTTCTCTGATCCAAAATGGGAAGATAACTATTTTGATGGTAAACATGCGTTGTTTCAATTGTCAATGCATGTTTATCAACTTGGATTGTCGCTTGAATCACTAAAACTGTATTCGTGTGGTTTCGATGGGCAAGATTTTCTTAACTTTGGTGCACTCAAAGACTTATCTTTGGGTCGGATTGAAGTTAAAATCAAAACCCTAAAAAAATTGTTATCAACATGTAGGACGATTGAAAGTTTGAATCTTGAGAAGTGTTGGAATTTGGCCAACTTTGATTTGGGAGATGAACCACTTGGATTAACAAGATTGGTGGTAAACAAGTGTGATTCTGAGTATTTCATATTTAATGCACCAAATCTTAAATACTTCAAATATTCTGGGGTTGTGTTTACTTCAGATATAAATGTTAGGGCTATAGAAGAGGTAGACATTGATTTTTCTCAAGAATCAGAATTCAATGAACGTGGCAATGAACTCTGCCAAATCCTTCATGATTTCTCCGCCGCCAAGATTCTAACCGTTTGCAGTTATCTACTTCAGGTCGTTCCATCTGGAGATGAACCGGTGAAGATGCAAAGTGCTTTGAATGTAAAACATTTGACTCTAAAGACTCAAATGCATCAATATGAACTTTGTGGATTTGAATTCATGCTCAACAGTTGCCCATTGCTTGAAAAACTCACATTGGACATAAGTCCACAAGTTATATTTGAGGACCATACACTTCCCTATGATGTAGACCTTAAGAAATTTTGGCAAACTCCTCGAGTGTTTCCTCAATGCTTGAAAAATACTTTGAAGGTGGTAGAAGTAATTGGATTGAGAGCCACAAACGAAGAACTTATGACTTGTTGCTTTCTTATGCAAGGAAAAGTTTTGGAACAAATTAATATTAAGTTGTGGAATGAAGATGACGGTAAAGAAGAATTTCGACGTGGATGTGCACAACTTTTAGTCAAAGCTCAAAAGGGTTCAAAGAATTTGCAAATATCAATTGATTGA
Protein sequence

>MsG0280008687.01.T01

MAKDNMELFSSILEPLLLAIVSFLPSEEATTRISILKEKWLKIWQFEENIDFNENFFVDSTSDENKQEQRKIFIDFITNWIAHFPSRGINRFSLTVSNPQTCGETIERCVAFAIQRGVKELILDFSDPKWEDNYFDGKHALFQLSMHVYQLGLSLESLKLYSCGFDGQDFLNFGALKDLSLGRIEVKIKTLKKLLSTCRTIESLNLEKCWNLANFDLGDEPLGLTRLVVNKCDSEYFIFNAPNLKYFKYSGVVFTSDINVRAIEEVDIDFSQESEFNERGNELCQILHDFSAAKILTVCSYLLQVVPSGDEPVKMQSALNVKHLTLKTQMHQYELCGFEFMLNSCPLLEKLTLDISPQVIFEDHTLPYDVDLKKFWQTPRVFPQCLKNTLKVVEVIGLRATNEELMTCCFLMQGKVLEQINIKLWNEDDGKEEFRRGCAQLLVKAQKGSKNLQISID*