AlfalfaGEDB | MsG0180005013.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005013.01

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005013.01.T01	KEH43363.1	90.132	456	44	1	1	456	1	455	0	843

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005013.01.T01	Q9FFU7	31.32	447	277	12	1	426	1	438	1.27E-60	208

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005013.01.T01	A0A072VPR4	90.132	456	44	1	1	456	1	455	0.0	843

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0180005013.01	MsG0380012970.01	PPI
MsG0380016794.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0380017043.01	PPI
MsG0180005013.01	MsG0780038508.01	PPI
MsG0780037380.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037066.01	PPI
MsG0280010541.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0580024322.01	PPI
MsG0780037487.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0180005012.01	PPI
MsG0180005013.01	MsG0780038469.01	PPI
MsG0180005013.01	MsG0080048156.01	PPI
MsG0180005013.01	MsG0780037216.01	PPI
MsG0780037487.01	MsG0180005013.01	PPI
MsG0780037375.01	MsG0180005013.01	PPI
MsG0780037584.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0680032353.01	PPI
MsG0180005013.01	MsG0780037556.01	PPI
MsG0780037688.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780038157.01	PPI
MsG0180005013.01	MsG0780038148.01	PPI
MsG0180005013.01	MsG0580028665.01	PPI
MsG0380014181.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780041655.01	PPI
MsG0180005013.01	MsG0780037381.01	PPI
MsG0680032353.01	MsG0180005013.01	PPI
MsG0780037598.01	MsG0180005013.01	PPI
MsG0780038497.01	MsG0180005013.01	PPI
MsG0680032369.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0680032353.01	PPI
MsG0680032353.01	MsG0180005013.01	PPI
MsG0580028638.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037481.01	PPI
MsG0680032369.01	MsG0180005013.01	PPI
MsG0580028665.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037379.01	PPI
MsG0680031415.01	MsG0180005013.01	PPI
MsG0380017414.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0680034526.01	PPI
MsG0180005013.01	MsG0280007849.01	PPI
MsG0580029019.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0580028665.01	PPI
MsG0780038510.01	MsG0180005013.01	PPI
MsG0680032353.01	MsG0180005013.01	PPI
MsG0780041655.01	MsG0180005013.01	PPI
MsG0780037247.01	MsG0180005013.01	PPI
MsG0780037574.01	MsG0180005013.01	PPI
MsG0680032369.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0580028652.01	PPI
MsG0280008689.01	MsG0180005013.01	PPI
MsG0780041629.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780036093.01	PPI
MsG0580024321.01	MsG0180005013.01	PPI
MsG0280008687.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0280007849.01	PPI
MsG0780036081.01	MsG0180005013.01	PPI
MsG0580028297.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0580028757.01	PPI
MsG0180005013.01	MsG0580028665.01	PPI
MsG0180005013.01	MsG0280011360.01	PPI
MsG0180005013.01	MsG0780037546.01	PPI
MsG0180005013.01	MsG0680032353.01	PPI
MsG0880047230.01	MsG0180005013.01	PPI
MsG0380017413.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037245.01	PPI
MsG0180005013.01	MsG0580029293.01	PPI
MsG0180005013.01	MsG0280011356.01	PPI
MsG0780037542.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780038501.01	PPI
MsG0180005013.01	MsG0680031413.01	PPI
MsG0180005013.01	MsG0680031419.01	PPI
MsG0780037385.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037561.01	PPI
MsG0780037590.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780038156.01	PPI
MsG0180005013.01	MsG0780036088.01	PPI
MsG0780037181.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037561.01	PPI
MsG0180005013.01	MsG0780041655.01	PPI
MsG0180005013.01	MsG0080049065.01	PPI
MsG0780038510.01	MsG0180005013.01	PPI
MsG0580029020.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0180006146.01	PPI
MsG0780038468.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037227.01	PPI
MsG0680031417.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780041655.01	PPI
MsG0580028665.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037561.01	PPI
MsG0180005013.01	MsG0680032369.01	PPI
MsG0180005013.01	MsG0780037249.01	PPI
MsG0180005013.01	MsG0780037228.01	PPI
MsG0380017513.01	MsG0180005013.01	PPI
MsG0480022109.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0380016761.01	PPI
MsG0780037872.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0680032369.01	PPI
MsG0780038510.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0280006386.01	PPI
MsG0180005013.01	MsG0780037573.01	PPI
MsG0180005013.01	MsG0780036082.01	PPI
MsG0780037584.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037367.01	PPI
MsG0180005013.01	MsG0380017479.01	PPI
MsG0180005013.01	MsG0780036083.01	PPI
MsG0280011351.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0680032369.01	PPI
MsG0180005013.01	MsG0580028757.01	PPI
MsG0180005013.01	MsG0480022017.01	PPI
MsG0180005013.01	MsG0580024537.01	PPI
MsG0580028665.01	MsG0180005013.01	PPI
MsG0780037584.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037584.01	PPI
MsG0780037179.01	MsG0180005013.01	PPI
MsG0780038502.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780038471.01	PPI
MsG0180005013.01	MsG0580024319.01	PPI
MsG0180005013.01	MsG0580029019.01	PPI
MsG0780038504.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0480022015.01	PPI
MsG0780037547.01	MsG0180005013.01	PPI
MsG0180005013.01	MsG0780037251.01	PPI
MsG0780037561.01	MsG0180005013.01	PPI
MsG0780037378.01	MsG0180005013.01	PPI
MsG0780037551.01	MsG0180005013.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005013.01.T01	MTR_1g090907	90.132	456	44	1	1	456	1	455	0.0	843
MsG0180005013.01.T01	MTR_2g048140	82.057	457	80	2	1	456	1	456	0.0	761
MsG0180005013.01.T01	MTR_1g090903	61.269	457	130	4	1	456	1	411	0.0	531
MsG0180005013.01.T01	MTR_3g448340	37.313	469	260	13	5	453	4	458	4.11e-86	271
MsG0180005013.01.T01	MTR_5g080150	35.941	409	218	9	4	404	2	374	1.15e-68	224
MsG0180005013.01.T01	MTR_3g049530	31.120	482	232	17	4	454	3	415	8.17e-52	180
MsG0180005013.01.T01	MTR_1g071060	74.444	90	23	0	40	129	7	96	5.66e-40	139
MsG0180005013.01.T01	MTR_7g029260	35.714	126	80	1	304	428	34	159	2.39e-17	81.3
MsG0180005013.01.T01	MTR_2g072720	25.714	455	277	20	7	434	39	459	1.95e-12	69.3
MsG0180005013.01.T01	MTR_8g468810	25.000	484	290	22	4	456	22	463	1.79e-11	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005013.01.T01	AT5G54820	31.320	447	277	12	1	426	1	438	1.29e-61	208
MsG0180005013.01.T01	AT1G56400	30.042	476	287	13	7	445	13	479	2.69e-59	202
MsG0180005013.01.T01	AT3G29830	30.839	441	271	14	4	424	5	431	4.73e-52	182
MsG0180005013.01.T01	AT3G29830	30.365	438	278	13	4	424	5	432	1.02e-50	179
MsG0180005013.01.T01	AT3G62230	27.549	461	314	13	6	454	7	459	5.67e-50	176
MsG0180005013.01.T01	AT1G56400	30.123	405	237	12	78	445	43	438	6.10e-48	171
MsG0180005013.01.T01	AT2G17305	31.707	164	107	3	296	455	106	268	3.77e-19	87.4
MsG0180005013.01.T01	AT3G58860	25.070	359	247	11	1	353	1	343	6.04e-14	73.9
MsG0180005013.01.T01	AT5G02920	26.957	230	138	7	3	231	24	224	1.78e-13	70.9
MsG0180005013.01.T01	AT3G28410	21.000	400	266	12	4	392	25	385	8.13e-13	70.5
MsG0180005013.01.T01	AT5G56370	24.205	409	253	17	6	403	1	363	2.06e-12	69.3
MsG0180005013.01.T01	AT5G56370	24.205	409	253	17	6	403	1	363	2.06e-12	69.3
MsG0180005013.01.T01	AT5G02930	23.656	372	228	12	5	353	26	364	2.24e-12	69.3
MsG0180005013.01.T01	AT5G56410	29.762	252	147	12	14	248	10	248	1.95e-11	66.2
MsG0180005013.01.T01	AT3G58930	23.840	474	294	21	6	438	1	448	3.67e-11	65.5
MsG0180005013.01.T01	AT3G58930	23.840	474	294	21	6	438	1	448	3.67e-11	65.5
MsG0180005013.01.T01	AT3G58930	23.840	474	294	21	6	438	1	448	3.67e-11	65.5

Find 77 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTAAATACTTCAAATATTC+TGG	0.116368	1:-85664901	MsG0180005013.01.T01:CDS
TTGATTTCTCTGATCCTAAA+TGG	0.158820	1:-85665263	MsG0180005013.01.T01:CDS
AAGTAGACCTTAAGAAATTT+TGG	0.209673	1:-85664206	MsG0180005013.01.T01:CDS
AAATTGTTATCTTCCCATTT+AGG	0.210930	1:+85665249	None:intergenic
CGCAAATTCTTTGAACGCTT+TGG	0.247622	1:+85663979	None:intergenic
TCATCGACTTCATCAGAAAT+TGG	0.258502	1:-85665413	MsG0180005013.01.T01:CDS
AAAATTTGTTATCAACTTGT+AGG	0.262526	1:-85665056	MsG0180005013.01.T01:CDS
GAATTTGGCAAACTTTGATT+TGG	0.267542	1:-85665001	MsG0180005013.01.T01:CDS
TCTTGAGAAATGTTGGAATT+TGG	0.269533	1:-85665016	MsG0180005013.01.T01:CDS
TGCACTCAAAGATTTGTCTT+TGG	0.298466	1:-85665109	MsG0180005013.01.T01:CDS
ATTGCAAGACGAAGTGATTC+TGG	0.309611	1:+85665594	None:intergenic
GCTCAAAAGCTGCCCATTGC+TGG	0.325341	1:-85664418	MsG0180005013.01.T01:CDS
CGGAGAAATCATGAAGGATT+TGG	0.330294	1:+85664779	None:intergenic
TATTTGAAGTATTTAAGATT+TGG	0.333013	1:+85664907	None:intergenic
TAAATGGGAAGATAACAATT+TGG	0.344219	1:-85665247	MsG0180005013.01.T01:CDS
ATTTCTTAAGGTCTACTTGA+TGG	0.344830	1:+85664211	None:intergenic
GCACTCAAAGATTTGTCTTT+GGG	0.346946	1:-85665108	MsG0180005013.01.T01:CDS
TCTTATGCAAGGAAAAGTTT+TGG	0.354339	1:-85664082	MsG0180005013.01.T01:CDS
GATAAACCTGCGTTGGCAAT+TGG	0.365643	1:+85665205	None:intergenic
AGTCATAAGTTCTTCATTTG+TGG	0.376656	1:+85664113	None:intergenic
AATTTGGCAAACTTTGATTT+GGG	0.381661	1:-85665000	MsG0180005013.01.T01:CDS
CTGTGCTTCTTTGATTTCAT+CGG	0.388843	1:+85665446	None:intergenic
TTAAATACTTCAAATATTCT+GGG	0.391463	1:-85664900	MsG0180005013.01.T01:CDS
TGTTCTCCTTGCGGCTTCTT+CGG	0.394545	1:+85665554	None:intergenic
TTGAAGGTGGTAGAAGTAAT+CGG	0.408674	1:-85664144	MsG0180005013.01.T01:CDS
GAGTTTGCCAAAATTTCTTA+AGG	0.408773	1:+85664199	None:intergenic
ATTGAAATTGATGTGGTCTT+CGG	0.409367	1:+85665494	None:intergenic
ATCCATGTTATTTCTTTCCA+TGG	0.412734	1:+85665632	None:intergenic
TTCAAATCCACAAAGCTCAT+AGG	0.414020	1:+85664446	None:intergenic
ATGCATCCCTATGAGCTTTG+TGG	0.415004	1:-85664453	MsG0180005013.01.T01:CDS
ACTGCAAACTGTTAGAATCT+TGG	0.420814	1:+85664753	None:intergenic
TTTCTTAAGGTCTACTTGAT+GGG	0.428036	1:+85664212	None:intergenic
CTCCTTGCGGCTTCTTCGGA+AGG	0.435231	1:+85665558	None:intergenic
GTTTGAGTCTTGAGAAATGT+TGG	0.437980	1:-85665023	MsG0180005013.01.T01:CDS
AGAGTTCATTGCCACGTTCA+TGG	0.438275	1:+85664803	None:intergenic
TTACTTCAGATGTAAATGTA+AGG	0.442543	1:-85664870	MsG0180005013.01.T01:CDS
TGATTTCTCTGATCCTAAAT+GGG	0.458338	1:-85665262	MsG0180005013.01.T01:CDS
TCAAAGATTTGTCTTTGGGT+TGG	0.475817	1:-85665104	MsG0180005013.01.T01:CDS
TTGTTTCCCCACAAGTTTGA+GGG	0.476639	1:+85665337	None:intergenic
AGCACTTGGATTAACAAGAT+TGG	0.479484	1:-85664971	MsG0180005013.01.T01:CDS
TTTCGAACCCTCAAACTTGT+GGG	0.484700	1:-85665344	MsG0180005013.01.T01:CDS
TGTTCCATCCGGAGATGAAT+CGG	0.486372	1:-85664526	MsG0180005013.01.T01:CDS
ATTAAGTTGTCGAATGAAGA+TGG	0.494144	1:-85664048	MsG0180005013.01.T01:CDS
CATCCGCTCCGATTCATCTC+CGG	0.508668	1:+85664518	None:intergenic
AAGTCCACAAGTTATATTTG+AGG	0.508872	1:-85664376	MsG0180005013.01.T01:intron
TCAAATCCACAAAGCTCATA+GGG	0.508994	1:+85664447	None:intergenic
GGATTGCGCACTTCACTAGC+CGG	0.514204	1:-85665392	MsG0180005013.01.T01:CDS
ACTTGTTGCTTTCTTATGCA+AGG	0.514283	1:-85664093	MsG0180005013.01.T01:CDS
TTCTTAAGGTCTACTTGATG+GGG	0.518779	1:+85664213	None:intergenic
GTTTCGAACCCTCAAACTTG+TGG	0.531195	1:-85665345	MsG0180005013.01.T01:CDS
CCAACGCAGGTTTATCAACT+CGG	0.534120	1:-85665198	MsG0180005013.01.T01:CDS
AGTTTGCAGTTATTTACTCC+AGG	0.537677	1:-85664740	MsG0180005013.01.T01:intron
ATTGTTTCCCCACAAGTTTG+AGG	0.540471	1:+85665336	None:intergenic
ACTTGGATTAACAAGATTGG+TGG	0.553442	1:-85664968	MsG0180005013.01.T01:CDS
GTTGTCGAATGAAGATGGTA+AGG	0.554984	1:-85664043	MsG0180005013.01.T01:CDS
TACTTCAGATGTAAATGTAA+GGG	0.557142	1:-85664869	MsG0180005013.01.T01:CDS
TTGCGGCTTCTTCGGAAGGT+AGG	0.559549	1:+85665562	None:intergenic
GCAAACTGTTAGAATCTTGG+CGG	0.561620	1:+85664756	None:intergenic
AAGGATACTTGTTCTCCTTG+CGG	0.568084	1:+85665545	None:intergenic
AACTGTTAGAATCTTGGCGG+CGG	0.578443	1:+85664759	None:intergenic
GATTTGGGAGATGAAGCACT+TGG	0.579721	1:-85664985	MsG0180005013.01.T01:CDS
GAGAAAACTTGTTAATGTCC+CGG	0.581682	1:+85665373	None:intergenic
CCGAGTTGATAAACCTGCGT+TGG	0.582629	1:+85665198	None:intergenic
AAATGTAAGGGCTATAGAAG+AGG	0.584772	1:-85664857	MsG0180005013.01.T01:CDS
CTGACCTCAAATATAACTTG+TGG	0.595453	1:+85664372	None:intergenic
CTAAAAGTTGTGCACATCCA+CGG	0.603973	1:+85664010	None:intergenic
AACCATGGAAAGAAATAACA+TGG	0.604311	1:-85665634	None:intergenic
TAAATACTTCAAATATTCTG+GGG	0.604843	1:-85664899	MsG0180005013.01.T01:CDS
GATTGCGCACTTCACTAGCC+GGG	0.605774	1:-85665391	MsG0180005013.01.T01:CDS
CGCTCCGATTCATCTCCGGA+TGG	0.616905	1:+85664522	None:intergenic
TACCTTCCGAAGAAGCCGCA+AGG	0.619142	1:-85665560	MsG0180005013.01.T01:CDS
TTCGAACCCTCAAACTTGTG+GGG	0.628166	1:-85665343	MsG0180005013.01.T01:CDS
GTTGTTCCAATTGCCAACGC+AGG	0.640937	1:-85665211	MsG0180005013.01.T01:CDS
TGGCGGCGGAGAAATCATGA+AGG	0.685071	1:+85664773	None:intergenic
GAATCAGATTTCCATGAACG+TGG	0.696307	1:-85664814	MsG0180005013.01.T01:CDS
GGTAAGGTCGAATTTCGCCG+TGG	0.737861	1:-85664027	MsG0180005013.01.T01:CDS
CATCCGGAGATGAATCGGAG+CGG	0.748262	1:-85664521	MsG0180005013.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCTAAACATTGTTATAAAAA+AGG	-	Chr1:85665043-85665062	MsG0180005013.01.T01:CDS	15.0%
!!	TTAAATACTTCAAATATTCT+GGG	-	Chr1:85664693-85664712	MsG0180005013.01.T01:intron	15.0%
!!!	TATTTGAAGTATTTAAGATT+TGG	+	Chr1:85664689-85664708	None:intergenic	15.0%
!!!	TTTTTTATAACAATGTTTAG+AGG	+	Chr1:85665044-85665063	None:intergenic	15.0%
!!	CTTAAATACTTCAAATATTC+TGG	-	Chr1:85664692-85664711	MsG0180005013.01.T01:intron	20.0%
!!	GTCATTGATATATAGTTATA+TGG	-	Chr1:85665298-85665317	MsG0180005013.01.T01:CDS	20.0%
!!	TAAATACTTCAAATATTCTG+GGG	-	Chr1:85664694-85664713	MsG0180005013.01.T01:intron	20.0%
!!!	AAAATTTGTTATCAACTTGT+AGG	-	Chr1:85664537-85664556	MsG0180005013.01.T01:intron	20.0%
!!!	TCACTTAAATTTTATTCATG+TGG	-	Chr1:85664431-85664450	MsG0180005013.01.T01:CDS	20.0%
!	AAATTGTTATCTTCCCATTT+AGG	+	Chr1:85664347-85664366	None:intergenic	25.0%
!	ACAAAAACTGGTTAAAGATA+TGG	-	Chr1:85664072-85664091	MsG0180005013.01.T01:CDS	25.0%
!	ATGCTTGAAAAATACTTTGA+AGG	-	Chr1:85665433-85665452	MsG0180005013.01.T01:CDS	25.0%
!	TAAATGGGAAGATAACAATT+TGG	-	Chr1:85664346-85664365	MsG0180005013.01.T01:intron	25.0%
!	TACTTCAGATGTAAATGTAA+GGG	-	Chr1:85664724-85664743	MsG0180005013.01.T01:intron	25.0%
!	TTACTTCAGATGTAAATGTA+AGG	-	Chr1:85664723-85664742	MsG0180005013.01.T01:intron	25.0%
!!	AAGTAGACCTTAAGAAATTT+TGG	-	Chr1:85665387-85665406	MsG0180005013.01.T01:CDS	25.0%
!!	AATTTGGCAAACTTTGATTT+GGG	-	Chr1:85664593-85664612	MsG0180005013.01.T01:intron	25.0%
!!	AGTTTTCATTGAAATTGATG+TGG	+	Chr1:85664109-85664128	None:intergenic	25.0%
!!	TCTTTAACCAGTTTTTGTTA+AGG	+	Chr1:85664070-85664089	None:intergenic	25.0%
!!!	AAAGTATTTTTCAAGCATTG+AGG	+	Chr1:85665431-85665450	None:intergenic	25.0%
!!!	AATTCAATTAAAAGAGTACC+TGG	+	Chr1:85664874-85664893	None:intergenic	25.0%
	AAGTCCACAAGTTATATTTG+AGG	-	Chr1:85665217-85665236	MsG0180005013.01.T01:CDS	30.0%
	AGTCATAAGTTCTTCATTTG+TGG	+	Chr1:85665483-85665502	None:intergenic	30.0%
	ATAAAAAAGGTTGTTCCATC+CGG	-	Chr1:85665056-85665075	MsG0180005013.01.T01:CDS	30.0%
	ATTGAAATTGATGTGGTCTT+CGG	+	Chr1:85664102-85664121	None:intergenic	30.0%
	ATTTCTTAAGGTCTACTTGA+TGG	+	Chr1:85665385-85665404	None:intergenic	30.0%
	CAAGTATCCTTAACAAAAAC+TGG	-	Chr1:85664060-85664079	MsG0180005013.01.T01:CDS	30.0%
	GAATTTGGCAAACTTTGATT+TGG	-	Chr1:85664592-85664611	MsG0180005013.01.T01:intron	30.0%
	GAGTTTGCCAAAATTTCTTA+AGG	+	Chr1:85665397-85665416	None:intergenic	30.0%
	TCTTGAGAAATGTTGGAATT+TGG	-	Chr1:85664577-85664596	MsG0180005013.01.T01:intron	30.0%
	TGATTTCTCTGATCCTAAAT+GGG	-	Chr1:85664331-85664350	MsG0180005013.01.T01:intron	30.0%
	TGCTTGTGTTTAGAAATTGT+AGG	-	Chr1:85664931-85664950	MsG0180005013.01.T01:CDS	30.0%
	TGTTTGCTCGTTTATATTAC+AGG	-	Chr1:85665346-85665365	MsG0180005013.01.T01:CDS	30.0%
	TTGATTTCTCTGATCCTAAA+TGG	-	Chr1:85664330-85664349	MsG0180005013.01.T01:intron	30.0%
	TTTCTTAAGGTCTACTTGAT+GGG	+	Chr1:85665384-85665403	None:intergenic	30.0%
!	ATTAAGTTGTCGAATGAAGA+TGG	-	Chr1:85665545-85665564	MsG0180005013.01.T01:CDS	30.0%
!	CATTAACAAGTTTTCTCTCA+CGG	-	Chr1:85664226-85664245	MsG0180005013.01.T01:CDS	30.0%
!	CTTGAAAAATACTTTGAAGG+TGG	-	Chr1:85665436-85665455	MsG0180005013.01.T01:CDS	30.0%
!	TCTTATGCAAGGAAAAGTTT+TGG	-	Chr1:85665511-85665530	MsG0180005013.01.T01:CDS	30.0%
	AAATGTAAGGGCTATAGAAG+AGG	-	Chr1:85664736-85664755	MsG0180005013.01.T01:intron	35.0%
	ACTGCAAACTGTTAGAATCT+TGG	+	Chr1:85664843-85664862	None:intergenic	35.0%
	ACTTGGATTAACAAGATTGG+TGG	-	Chr1:85664625-85664644	MsG0180005013.01.T01:intron	35.0%
	AGCACTTGGATTAACAAGAT+TGG	-	Chr1:85664622-85664641	MsG0180005013.01.T01:intron	35.0%
	AGTTTGCAGTTATTTACTCC+AGG	-	Chr1:85664853-85664872	MsG0180005013.01.T01:CDS	35.0%
	ATTGCTGGAAAAACTCACAT+TGG	-	Chr1:85665190-85665209	MsG0180005013.01.T01:CDS	35.0%
	CTGACCTCAAATATAACTTG+TGG	+	Chr1:85665224-85665243	None:intergenic	35.0%
	GCACTCAAAGATTTGTCTTT+GGG	-	Chr1:85664485-85664504	MsG0180005013.01.T01:CDS	35.0%
	GTTTGAGTCTTGAGAAATGT+TGG	-	Chr1:85664570-85664589	MsG0180005013.01.T01:intron	35.0%
	TCAAAGATTTGTCTTTGGGT+TGG	-	Chr1:85664489-85664508	MsG0180005013.01.T01:CDS	35.0%
	TCAAATCCACAAAGCTCATA+GGG	+	Chr1:85665149-85665168	None:intergenic	35.0%
	TGCACTCAAAGATTTGTCTT+TGG	-	Chr1:85664484-85664503	MsG0180005013.01.T01:CDS	35.0%
	TTCAAATCCACAAAGCTCAT+AGG	+	Chr1:85665150-85665169	None:intergenic	35.0%
	TTCTTAAGGTCTACTTGATG+GGG	+	Chr1:85665383-85665402	None:intergenic	35.0%
	TTGAAGGTGGTAGAAGTAAT+CGG	-	Chr1:85665449-85665468	MsG0180005013.01.T01:CDS	35.0%
!	AATGTGAGTTTTTCCAGCAA+TGG	+	Chr1:85665191-85665210	None:intergenic	35.0%
!	ATGTGAGTTTTTCCAGCAAT+GGG	+	Chr1:85665190-85665209	None:intergenic	35.0%
!	CTGTGCTTCTTTGATTTCAT+CGG	+	Chr1:85664150-85664169	None:intergenic	35.0%
!!	ACTTGTTGCTTTCTTATGCA+AGG	-	Chr1:85665500-85665519	MsG0180005013.01.T01:CDS	35.0%
!!	GAGAAAACTTGTTAATGTCC+CGG	+	Chr1:85664223-85664242	None:intergenic	35.0%
!!	TCATCGACTTCATCAGAAAT+TGG	-	Chr1:85664180-85664199	MsG0180005013.01.T01:CDS	35.0%
	AAGGATACTTGTTCTCCTTG+CGG	+	Chr1:85664051-85664070	None:intergenic	40.0%
	ATTGCAAGACGAAGTGATTC+TGG	+	Chr1:85664002-85664021	None:intergenic	40.0%
	ATTGTTTCCCCACAAGTTTG+AGG	+	Chr1:85664260-85664279	None:intergenic	40.0%
	CGCAAATTCTTTGAACGCTT+TGG	+	Chr1:85665617-85665636	None:intergenic	40.0%
	CGGAGAAATCATGAAGGATT+TGG	+	Chr1:85664817-85664836	None:intergenic	40.0%
	CTAAAAGTTGTGCACATCCA+CGG	+	Chr1:85665586-85665605	None:intergenic	40.0%
	GAATCAGATTTCCATGAACG+TGG	-	Chr1:85664779-85664798	MsG0180005013.01.T01:CDS	40.0%
	GCAAACTGTTAGAATCTTGG+CGG	+	Chr1:85664840-85664859	None:intergenic	40.0%
	GTTGTCGAATGAAGATGGTA+AGG	-	Chr1:85665550-85665569	MsG0180005013.01.T01:CDS	40.0%
	TTGTTTCCCCACAAGTTTGA+GGG	+	Chr1:85664259-85664278	None:intergenic	40.0%
	TTTCGAACCCTCAAACTTGT+GGG	-	Chr1:85664249-85664268	MsG0180005013.01.T01:intron	40.0%
	AACTGTTAGAATCTTGGCGG+CGG	+	Chr1:85664837-85664856	None:intergenic	45.0%
	AGAGTTCATTGCCACGTTCA+TGG	+	Chr1:85664793-85664812	None:intergenic	45.0%
	ATGCATCCCTATGAGCTTTG+TGG	-	Chr1:85665140-85665159	MsG0180005013.01.T01:CDS	45.0%
	CCAACGCAGGTTTATCAACT+CGG	-	Chr1:85664395-85664414	MsG0180005013.01.T01:CDS	45.0%
	GTTTCGAACCCTCAAACTTG+TGG	-	Chr1:85664248-85664267	MsG0180005013.01.T01:intron	45.0%
	TGTTCCATCCGGAGATGAAT+CGG	-	Chr1:85665067-85665086	MsG0180005013.01.T01:CDS	45.0%
	TTCGAACCCTCAAACTTGTG+GGG	-	Chr1:85664250-85664269	MsG0180005013.01.T01:intron	45.0%
!	GATAAACCTGCGTTGGCAAT+TGG	+	Chr1:85664391-85664410	None:intergenic	45.0%
!	GATTTGGGAGATGAAGCACT+TGG	-	Chr1:85664608-85664627	MsG0180005013.01.T01:intron	45.0%
!!!	GTTGCTTTTGCGACACAACA+AGG	-	Chr1:85664290-85664309	MsG0180005013.01.T01:intron	45.0%
	GTTGTTCCAATTGCCAACGC+AGG	-	Chr1:85664382-85664401	MsG0180005013.01.T01:CDS	50.0%
	TGTTCTCCTTGCGGCTTCTT+CGG	+	Chr1:85664042-85664061	None:intergenic	50.0%
!!	CCGAGTTGATAAACCTGCGT+TGG	+	Chr1:85664398-85664417	None:intergenic	50.0%
	CATCCGCTCCGATTCATCTC+CGG	+	Chr1:85665078-85665097	None:intergenic	55.0%
	CATCCGGAGATGAATCGGAG+CGG	-	Chr1:85665072-85665091	MsG0180005013.01.T01:CDS	55.0%
	GATTGCGCACTTCACTAGCC+GGG	-	Chr1:85664202-85664221	MsG0180005013.01.T01:CDS	55.0%
	GCTCAAAAGCTGCCCATTGC+TGG	-	Chr1:85665175-85665194	MsG0180005013.01.T01:CDS	55.0%
	GGATTGCGCACTTCACTAGC+CGG	-	Chr1:85664201-85664220	MsG0180005013.01.T01:CDS	55.0%
	GGTAAGGTCGAATTTCGCCG+TGG	-	Chr1:85665566-85665585	MsG0180005013.01.T01:CDS	55.0%
	TACCTTCCGAAGAAGCCGCA+AGG	-	Chr1:85664033-85664052	MsG0180005013.01.T01:CDS	55.0%
	TGGCGGCGGAGAAATCATGA+AGG	+	Chr1:85664823-85664842	None:intergenic	55.0%
	TTGCGGCTTCTTCGGAAGGT+AGG	+	Chr1:85664034-85664053	None:intergenic	55.0%
	CGCTCCGATTCATCTCCGGA+TGG	+	Chr1:85665074-85665093	None:intergenic	60.0%
	CTCCTTGCGGCTTCTTCGGA+AGG	+	Chr1:85664038-85664057	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	85663963	85665652	85663963	ID=MsG0180005013.01;Name=MsG0180005013.01
Chr1	mRNA	85663963	85665652	85663963	ID=MsG0180005013.01.T01;Parent=MsG0180005013.01;Name=MsG0180005013.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|0\|0\|1\|1\|1\|3\|0\|456
Chr1	exon	85664741	85665652	85664741	ID=MsG0180005013.01.T01:exon:9710;Parent=MsG0180005013.01.T01
Chr1	exon	85664377	85664550	85664377	ID=MsG0180005013.01.T01:exon:9709;Parent=MsG0180005013.01.T01
Chr1	exon	85663963	85664247	85663963	ID=MsG0180005013.01.T01:exon:9708;Parent=MsG0180005013.01.T01
Chr1	CDS	85664741	85665652	85664741	ID=MsG0180005013.01.T01:cds;Parent=MsG0180005013.01.T01
Chr1	CDS	85664377	85664550	85664377	ID=MsG0180005013.01.T01:cds;Parent=MsG0180005013.01.T01
Chr1	CDS	85663963	85664247	85663963	ID=MsG0180005013.01.T01:cds;Parent=MsG0180005013.01.T01

Gene Sequence

>MsG0180005013.01.T01

ATGGAAAGAAATAACATGGATATGTTTTCTTTGATTCCAGAATCACTTCGTCTTGCAATCGTTTCTTTCCTACCTTCCGAAGAAGCCGCAAGGAGAACAAGTATCCTTAACAAAAACTGGTTAAAGATATGGCAGTCCGAAGACCACATCAATTTCAATGAAAACTTCTTTGTCGATTCAAGTTCCGATGAAATCAAAGAAGCACAGAGAAAATTTTTCATCGACTTCATCAGAAATTGGATTGCGCACTTCACTAGCCGGGACATTAACAAGTTTTCTCTCACGGTTTCGAACCCTCAAACTTGTGGGGAAACAATTGAACGTTGTGTTGCTTTTGCGACACAACAAGGCGTGAAAGATTTAACATTTGATTTCTCTGATCCTAAATGGGAAGATAACAATTTGGATGATAAACATGCGTTGTTCCAATTGCCAACGCAGGTTTATCAACTCGGATCATCACTTGAATCACTTAAATTTTATTCATGTGGTTTTGATATGCAAAATCTTCATAACTTTGTTGCACTCAAAGATTTGTCTTTGGGTTGGATTGAAGTTAAAATCAAAACTCTCAAAAATTTGTTATCAACTTGTAGGTCGATTCAAAGTTTGAGTCTTGAGAAATGTTGGAATTTGGCAAACTTTGATTTGGGAGATGAAGCACTTGGATTAACAAGATTGGTGGTAAACAAGTGTGATTCTGAGTATTTCATATTTAATGCACCAAATCTTAAATACTTCAAATATTCTGGGGCTGTGTTTACTTCAGATGTAAATGTAAGGGCTATAGAAGAGGTAGACATTGATTTTTCTCAAGAATCAGATTTCCATGAACGTGGCAATGAACTCTGCCAAATCCTTCATGATTTCTCCGCCGCCAAGATTCTAACAGTTTGCAGTTATTTACTCCAGGTTGTTCCATCCGGAGATGAATCGGAGCGGATGCAAAGTGCTTTGAATGTAAAACATTTGATTCTAAAGACTCAAATGCATCCCTATGAGCTTTGTGGATTTGAATTCATGCTCAAAAGCTGCCCATTGCTGGAAAAACTCACATTGGACATAAGTCCACAAGTTATATTTGAGGACTATACATTTCCCCATCAAGTAGACCTTAAGAAATTTTGGCAAACTCGTCGAGTGTTTCCTCAATGCTTGAAAAATACTTTGAAGGTGGTAGAAGTAATCGGATTGAGAGCCACAAATGAAGAACTTATGACTTGTTGCTTTCTTATGCAAGGAAAAGTTTTGGAACAGATTAATATTAAGTTGTCGAATGAAGATGGTAAGGTCGAATTTCGCCGTGGATGTGCACAACTTTTAGTCAATGCTCCAAAGCGTTCAAAGAATTTGCGAATATCAATTGATTGA

Protein sequence

>MsG0180005013.01.T01

MERNNMDMFSLIPESLRLAIVSFLPSEEAARRTSILNKNWLKIWQSEDHINFNENFFVDSSSDEIKEAQRKFFIDFIRNWIAHFTSRDINKFSLTVSNPQTCGETIERCVAFATQQGVKDLTFDFSDPKWEDNNLDDKHALFQLPTQVYQLGSSLESLKFYSCGFDMQNLHNFVALKDLSLGWIEVKIKTLKNLLSTCRSIQSLSLEKCWNLANFDLGDEALGLTRLVVNKCDSEYFIFNAPNLKYFKYSGAVFTSDVNVRAIEEVDIDFSQESDFHERGNELCQILHDFSAAKILTVCSYLLQVVPSGDESERMQSALNVKHLILKTQMHPYELCGFEFMLKSCPLLEKLTLDISPQVIFEDYTFPHQVDLKKFWQTRRVFPQCLKNTLKVVEVIGLRATNEELMTCCFLMQGKVLEQINIKLSNEDGKVEFRRGCAQLLVNAPKRSKNLRISID*