AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028652.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028652.01.T01 MTR_7g056287 52.688 372 156 4 2 353 1 372 2.08e-128 373
MsG0580028652.01.T01 MTR_7g056277 53.226 372 154 4 2 353 257 628 3.48e-126 376
MsG0580028652.01.T01 MTR_7g060470 40.602 399 182 12 2 352 1 392 3.49e-76 240
MsG0580028652.01.T01 MTR_7g007080 39.433 388 185 12 1 350 1 376 1.34e-70 226
MsG0580028652.01.T01 MTR_7g032380 35.326 368 196 14 4 352 11 355 7.16e-58 191
MsG0580028652.01.T01 MTR_1g041245 35.677 384 203 14 4 352 11 385 5.08e-57 190
MsG0580028652.01.T01 MTR_7g056307 87.640 89 11 0 262 350 1 89 8.11e-51 166
MsG0580028652.01.T01 MTR_3g036250 33.967 368 213 11 4 350 5 363 8.27e-51 173
MsG0580028652.01.T01 MTR_1g085120 35.567 388 210 14 2 354 90 472 2.85e-50 175
MsG0580028652.01.T01 MTR_8g085430 33.512 373 174 13 4 355 11 330 3.39e-50 171
MsG0580028652.01.T01 MTR_1g108820 35.476 389 198 14 4 351 8 384 5.82e-50 172
MsG0580028652.01.T01 MTR_1g085120 35.567 388 210 14 2 354 165 547 9.70e-50 175
MsG0580028652.01.T01 MTR_6g022500 33.943 383 217 15 4 355 101 478 1.55e-49 173
MsG0580028652.01.T01 MTR_7g056433 32.987 385 218 11 2 352 10 388 1.58e-48 168
MsG0580028652.01.T01 MTR_7g032370 33.699 365 199 11 16 352 2 351 2.50e-48 166
MsG0580028652.01.T01 MTR_7g098510 32.718 379 219 9 4 352 18 390 4.18e-48 167
MsG0580028652.01.T01 MTR_7g033990 35.028 354 190 10 4 325 11 356 9.76e-48 167
MsG0580028652.01.T01 MTR_0543s0010 33.333 372 219 8 3 352 85 449 1.44e-47 167
MsG0580028652.01.T01 MTR_3g040700 32.938 337 195 10 4 317 43 371 1.09e-46 164
MsG0580028652.01.T01 MTR_7g115270 30.203 394 226 10 2 350 10 399 3.29e-46 162
MsG0580028652.01.T01 MTR_4g039440 33.938 386 214 12 4 354 34 413 1.84e-45 160
MsG0580028652.01.T01 MTR_3g108150 33.419 389 206 8 3 352 12 386 2.16e-45 160
MsG0580028652.01.T01 MTR_3g107100 31.514 403 219 12 3 355 10 405 1.31e-44 158
MsG0580028652.01.T01 MTR_0492s0020 33.240 358 210 8 3 338 85 435 2.12e-44 158
MsG0580028652.01.T01 MTR_7g034115 33.807 352 195 12 4 324 11 355 4.25e-44 156
MsG0580028652.01.T01 MTR_3g108560 32.368 380 217 11 3 352 19 388 6.02e-44 156
MsG0580028652.01.T01 MTR_7g033915 32.105 380 201 12 4 352 11 364 9.41e-44 155
MsG0580028652.01.T01 MTR_7g026500 33.249 397 201 17 4 352 14 394 1.03e-43 155
MsG0580028652.01.T01 MTR_7g098480 33.687 377 216 7 4 352 18 388 2.57e-43 156
MsG0580028652.01.T01 MTR_7g088260 33.333 384 212 11 3 353 90 462 3.22e-42 153
MsG0580028652.01.T01 MTR_1g066830 31.854 383 223 12 4 352 8 386 8.57e-42 150
MsG0580028652.01.T01 MTR_5g073420 31.302 361 203 10 4 333 11 357 8.58e-42 150
MsG0580028652.01.T01 MTR_3g467400 34.133 375 210 14 4 352 3 366 2.13e-41 149
MsG0580028652.01.T01 MTR_5g058100 33.420 383 217 13 4 354 9 385 1.17e-40 147
MsG0580028652.01.T01 MTR_6g011460 33.333 381 220 12 4 354 46 422 3.19e-40 147
MsG0580028652.01.T01 MTR_1089s0010 32.727 385 213 15 4 354 8 380 1.40e-39 144
MsG0580028652.01.T01 MTR_5g008920 31.551 374 222 10 6 352 14 380 2.16e-39 144
MsG0580028652.01.T01 MTR_5g058000 33.333 375 222 13 4 355 8 377 7.42e-39 142
MsG0580028652.01.T01 MTR_2g007450 31.961 413 206 16 4 351 16 418 8.70e-39 143
MsG0580028652.01.T01 MTR_7g098570 32.718 379 219 8 4 352 20 392 1.20e-38 144
MsG0580028652.01.T01 MTR_1g108800 33.690 374 181 9 4 351 8 340 1.27e-37 138
MsG0580028652.01.T01 MTR_7g034110 35.826 321 163 9 4 311 11 301 2.32e-37 137
MsG0580028652.01.T01 MTR_5g045170 30.971 381 223 12 6 352 16 390 4.05e-37 138
MsG0580028652.01.T01 MTR_3g023630 32.682 358 210 11 4 335 8 360 1.22e-36 136
MsG0580028652.01.T01 MTR_3g105060 30.667 375 218 11 4 352 14 372 1.40e-36 136
MsG0580028652.01.T01 MTR_7g021990 31.989 372 211 10 4 340 48 412 4.36e-36 136
MsG0580028652.01.T01 MTR_7g055943 30.909 385 230 11 4 354 40 422 4.62e-36 135
MsG0580028652.01.T01 MTR_6g040270 31.472 394 216 14 1 353 1 381 4.70e-36 135
MsG0580028652.01.T01 MTR_7g034120 34.740 308 164 8 77 354 9 309 1.28e-35 132
MsG0580028652.01.T01 MTR_7g021950 31.989 372 211 10 4 340 48 412 1.72e-35 135
MsG0580028652.01.T01 MTR_5g073370 30.628 382 219 11 4 349 5 376 3.55e-35 132
MsG0580028652.01.T01 MTR_2g007400 30.221 407 212 18 2 351 10 401 4.51e-35 132
MsG0580028652.01.T01 MTR_3g082890 31.688 385 208 12 4 340 97 474 6.64e-35 133
MsG0580028652.01.T01 MTR_1g085120 36.770 291 147 12 2 258 177 464 7.92e-35 133
MsG0580028652.01.T01 MTR_5g008950 31.551 374 219 14 6 352 1 364 9.52e-35 131
MsG0580028652.01.T01 MTR_7g056420 31.332 383 196 13 2 347 7 359 4.82e-34 133
MsG0580028652.01.T01 MTR_6g045333 30.357 392 223 13 4 352 61 445 5.14e-34 130
MsG0580028652.01.T01 MTR_7g056430 31.332 383 196 13 2 347 7 359 5.64e-34 133
MsG0580028652.01.T01 MTR_6g044572 31.633 392 223 13 4 354 2 389 2.03e-33 128
MsG0580028652.01.T01 MTR_7g022105 30.997 371 212 11 4 338 49 411 2.28e-33 128
MsG0580028652.01.T01 MTR_2g036470 29.948 384 228 12 4 350 14 393 2.98e-33 127
MsG0580028652.01.T01 MTR_5g007410 29.570 372 225 9 6 342 28 397 4.00e-33 128
MsG0580028652.01.T01 MTR_1g108820 35.374 294 144 10 4 258 8 294 1.09e-32 125
MsG0580028652.01.T01 MTR_3g107120 29.771 393 217 12 4 350 9 388 1.82e-32 125
MsG0580028652.01.T01 MTR_7g056020 32.143 364 204 10 3 340 15 361 1.92e-32 128
MsG0580028652.01.T01 MTR_3g082890 30.095 422 203 13 4 340 17 431 2.90e-32 125
MsG0580028652.01.T01 MTR_6g044560 31.633 392 223 13 4 354 178 565 4.74e-32 126
MsG0580028652.01.T01 MTR_7g075820 28.643 398 225 12 3 351 5 392 6.35e-32 124
MsG0580028652.01.T01 MTR_5g083890 29.676 401 213 15 3 345 5 394 7.20e-32 125
MsG0580028652.01.T01 MTR_5g045510 30.263 380 212 12 4 351 12 370 7.70e-32 123
MsG0580028652.01.T01 MTR_3g099830 30.928 388 201 15 4 351 12 372 3.77e-31 121
MsG0580028652.01.T01 MTR_3g107160 29.716 387 221 11 3 350 6 380 4.24e-31 121
MsG0580028652.01.T01 MTR_5g061680 33.942 274 154 10 1 260 8 268 6.69e-31 119
MsG0580028652.01.T01 MTR_7g083740 30.446 381 202 15 4 352 17 366 7.10e-31 120
MsG0580028652.01.T01 MTR_1g053025 30.303 396 216 18 4 350 2 386 8.18e-31 120
MsG0580028652.01.T01 MTR_7g114710 31.361 338 195 12 4 320 13 334 1.36e-30 119
MsG0580028652.01.T01 MTR_5g031970 30.812 357 218 10 4 350 16 353 5.90e-30 117
MsG0580028652.01.T01 MTR_5g063950 27.513 378 223 9 4 353 8 362 1.66e-29 117
MsG0580028652.01.T01 MTR_2g005990 29.426 401 223 14 1 351 3 393 1.88e-29 117
MsG0580028652.01.T01 MTR_5g039490 30.707 368 224 13 4 352 20 375 2.68e-29 116
MsG0580028652.01.T01 MTR_6g022360 28.912 377 228 8 4 352 43 407 4.25e-29 116
MsG0580028652.01.T01 MTR_3g109982 36.555 238 127 6 126 339 224 461 1.42e-28 117
MsG0580028652.01.T01 MTR_3g109982 37.634 186 108 3 4 186 13 193 4.08e-23 101
MsG0580028652.01.T01 MTR_5g073340 29.940 334 165 11 4 299 8 310 2.11e-28 112
MsG0580028652.01.T01 MTR_5g039450 29.014 355 189 13 4 320 6 335 2.29e-28 113
MsG0580028652.01.T01 MTR_3g026920 29.104 402 216 16 2 350 17 402 9.84e-28 112
MsG0580028652.01.T01 MTR_1g107385 28.465 404 221 15 3 351 31 421 1.06e-27 112
MsG0580028652.01.T01 MTR_7g056447 40.331 181 100 5 4 180 9 185 1.21e-27 110
MsG0580028652.01.T01 MTR_0009s0080 28.775 351 213 9 6 321 20 368 1.67e-27 112
MsG0580028652.01.T01 MTR_5g012840 29.154 319 172 9 26 326 11 293 3.37e-27 109
MsG0580028652.01.T01 MTR_2g007500 30.205 341 169 11 4 297 14 332 5.78e-27 109
MsG0580028652.01.T01 MTR_3g108560 31.597 288 158 10 3 261 19 296 1.41e-26 107
MsG0580028652.01.T01 MTR_7g007340 29.365 378 194 16 4 347 13 351 1.75e-26 108
MsG0580028652.01.T01 MTR_3g071850 29.609 358 206 12 4 320 24 376 1.78e-26 111
MsG0580028652.01.T01 MTR_3g087260 34.694 294 160 10 87 352 167 456 3.90e-26 108
MsG0580028652.01.T01 MTR_3g087260 33.088 272 144 8 4 258 12 262 1.35e-22 98.6
MsG0580028652.01.T01 MTR_5g013500 27.577 388 214 15 2 352 7 364 1.81e-25 105
MsG0580028652.01.T01 MTR_5g065100 28.291 357 228 8 6 352 10 348 3.24e-25 105
MsG0580028652.01.T01 MTR_4g134150 34.759 187 108 5 3 185 13 189 4.12e-25 102
MsG0580028652.01.T01 MTR_4g080610 28.297 364 198 9 6 339 14 344 1.77e-24 102
MsG0580028652.01.T01 MTR_2g007360 28.643 398 197 18 4 351 12 372 4.51e-24 102
MsG0580028652.01.T01 MTR_8g077460 28.723 376 232 15 3 352 9 374 2.07e-23 100
MsG0580028652.01.T01 MTR_3g110010 37.634 186 108 3 4 186 13 193 4.47e-23 100
MsG0580028652.01.T01 MTR_3g110010 37.975 158 75 5 126 260 224 381 3.39e-17 83.6
MsG0580028652.01.T01 MTR_6g022520 33.956 321 169 14 69 354 2 314 6.05e-23 97.8
MsG0580028652.01.T01 MTR_3g095600 31.056 322 150 16 1 312 1 260 8.78e-23 97.1
MsG0580028652.01.T01 MTR_7g033945 36.905 168 86 4 4 158 11 171 1.13e-22 94.0
MsG0580028652.01.T01 MTR_5g039470 28.614 332 197 9 20 316 1 327 3.41e-22 95.9
MsG0580028652.01.T01 MTR_4g098590 29.315 365 197 14 6 320 1 354 5.19e-21 93.2
MsG0580028652.01.T01 MTR_7g007370 31.250 288 112 11 4 260 17 249 9.61e-21 92.0
MsG0580028652.01.T01 MTR_2g007090 32.569 218 123 10 148 352 87 293 2.58e-20 90.1
MsG0580028652.01.T01 MTR_8g467800 25.607 453 221 17 2 354 18 454 3.23e-20 91.7
MsG0580028652.01.T01 MTR_7g034090 27.838 370 192 16 1 353 1 312 3.37e-20 91.7
MsG0580028652.01.T01 MTR_2g008320 27.595 395 216 16 4 350 52 424 4.63e-20 91.3
MsG0580028652.01.T01 MTR_2g007530 28.415 366 197 15 2 350 17 334 1.75e-19 88.6
MsG0580028652.01.T01 MTR_5g084070 26.202 416 224 14 4 345 13 419 6.47e-18 84.7
MsG0580028652.01.T01 MTR_2g008310 26.870 361 201 14 4 320 2 343 6.60e-18 84.7
MsG0580028652.01.T01 MTR_5g061410 29.329 283 150 8 6 261 7 266 2.27e-17 81.3
MsG0580028652.01.T01 MTR_3g114200 35.862 145 85 4 4 144 19 159 1.89e-16 76.3
MsG0580028652.01.T01 MTR_4g032730 24.454 458 231 19 4 352 15 466 5.03e-16 79.3
MsG0580028652.01.T01 MTR_7g068570 33.548 155 92 5 4 151 5 155 1.30e-15 74.7
MsG0580028652.01.T01 MTR_5g054920 31.606 193 101 6 169 333 3 192 1.92e-15 74.3
MsG0580028652.01.T01 MTR_7g033940 36.923 130 73 4 6 130 96 221 2.60e-15 74.7
MsG0580028652.01.T01 MTR_5g080710 25.408 429 232 15 4 352 33 453 3.51e-15 76.6
MsG0580028652.01.T01 MTR_8g058965 31.401 207 117 8 2 184 11 216 1.48e-14 75.1
MsG0580028652.01.T01 MTR_7g098590 41.053 95 54 1 4 98 18 110 1.57e-14 70.1
MsG0580028652.01.T01 MTR_8g062010 30.693 202 108 10 2 184 7 195 2.66e-14 73.9
MsG0580028652.01.T01 MTR_1g038710 29.146 199 127 5 4 190 19 215 2.72e-14 73.9
MsG0580028652.01.T01 MTR_5g092960 23.077 455 232 15 4 352 19 461 3.08e-14 73.9
MsG0580028652.01.T01 MTR_6g022390 34.586 133 76 4 1 124 2 132 3.54e-14 69.7
MsG0580028652.01.T01 MTR_4g093690 29.592 196 109 6 4 182 18 201 9.25e-14 71.2
MsG0580028652.01.T01 MTR_3g048290 29.000 200 119 7 4 188 23 214 1.12e-13 72.4
MsG0580028652.01.T01 MTR_8g467800 32.461 191 116 6 2 183 18 204 1.36e-13 71.2
MsG0580028652.01.T01 MTR_4g050250 30.622 209 116 8 4 184 21 228 7.86e-13 69.7
MsG0580028652.01.T01 MTR_4g080787 28.922 204 116 8 2 182 17 214 1.82e-12 68.6
MsG0580028652.01.T01 MTR_5g073400 35.156 128 72 5 78 198 7 130 2.12e-12 64.3
MsG0580028652.01.T01 MTR_7g081290 63.830 47 17 0 4 50 18 64 4.79e-12 65.9
MsG0580028652.01.T01 MTR_2g020170 43.373 83 46 1 4 85 22 104 4.81e-12 63.5
MsG0580028652.01.T01 MTR_2g100590 26.259 278 174 12 4 265 42 304 5.02e-12 67.4
MsG0580028652.01.T01 MTR_2g100590 26.259 278 174 12 4 265 42 304 5.49e-12 67.0
MsG0580028652.01.T01 MTR_2g100590 26.259 278 174 12 4 265 42 304 5.53e-12 67.0
MsG0580028652.01.T01 MTR_4g056020 32.995 197 102 8 4 182 9 193 7.35e-12 66.6
MsG0580028652.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 8.93e-12 65.9
MsG0580028652.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 9.23e-12 65.9
MsG0580028652.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 1.08e-11 65.9
MsG0580028652.01.T01 MTR_1g077420 31.977 172 97 7 1 161 1 163 1.48e-11 64.7
MsG0580028652.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 1.50e-11 65.5
MsG0580028652.01.T01 MTR_8g468810 31.443 194 117 7 4 183 25 216 1.78e-11 65.5
MsG0580028652.01.T01 MTR_6g013160 34.101 217 114 6 4 208 52 251 1.82e-11 65.5
MsG0580028652.01.T01 MTR_3g113782 57.447 47 20 0 4 50 17 63 1.91e-11 60.1
MsG0580028652.01.T01 MTR_4g056030 30.303 198 120 8 4 189 9 200 2.42e-11 65.1
MsG0580028652.01.T01 MTR_4g080773 26.108 203 123 7 2 182 17 214 4.98e-11 64.3
MsG0580028652.01.T01 MTR_4g080773 26.108 203 123 7 2 182 17 214 5.75e-11 63.9
MsG0580028652.01.T01 MTR_1g090900 30.952 168 103 5 4 164 11 172 6.87e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028652.01.T01 AT5G41840 33.333 216 114 8 4 195 14 223 4.96e-27 112
MsG0580028652.01.T01 AT4G14096 35.052 194 110 6 4 187 8 195 2.38e-24 103
MsG0580028652.01.T01 AT4G14096 35.052 194 110 6 4 187 8 195 2.38e-24 103
MsG0580028652.01.T01 AT5G41830 30.876 217 115 7 4 194 13 220 5.92e-24 103
MsG0580028652.01.T01 AT4G14103 35.204 196 109 9 4 187 8 197 9.37e-24 102
MsG0580028652.01.T01 AT4G14103 35.204 196 109 9 4 187 8 197 1.39e-23 100
MsG0580028652.01.T01 AT4G14103 35.204 196 109 9 4 187 8 197 1.39e-23 100
MsG0580028652.01.T01 AT4G00320 31.797 217 113 8 4 194 13 220 6.95e-23 100
MsG0580028652.01.T01 AT3G59200 34.500 200 115 6 4 191 7 202 6.21e-21 93.2
MsG0580028652.01.T01 AT3G59200 34.500 200 115 6 4 191 7 202 2.44e-20 92.4
MsG0580028652.01.T01 AT3G59240 32.828 198 115 6 4 188 8 200 2.77e-20 92.4
MsG0580028652.01.T01 AT3G59190 32.828 198 106 8 4 182 12 201 3.68e-20 91.3
MsG0580028652.01.T01 AT1G69630 25.618 445 219 16 4 350 18 448 4.10e-20 91.7
MsG0580028652.01.T01 AT3G59190 33.333 198 105 8 4 182 12 201 5.32e-20 91.7
MsG0580028652.01.T01 AT4G10400 26.087 368 224 13 4 341 2 351 6.11e-20 90.9
MsG0580028652.01.T01 AT4G10400 26.087 368 224 13 4 341 2 351 6.11e-20 90.9
MsG0580028652.01.T01 AT4G10400 26.087 368 224 13 4 341 2 351 6.11e-20 90.9
MsG0580028652.01.T01 AT5G56370 26.450 431 223 14 4 352 2 420 1.69e-19 89.4
MsG0580028652.01.T01 AT5G56370 26.450 431 223 14 4 352 2 420 1.69e-19 89.4
MsG0580028652.01.T01 AT3G59210 34.010 197 112 7 4 187 7 198 1.01e-18 87.4
MsG0580028652.01.T01 AT3G59210 34.010 197 112 7 4 187 7 198 1.01e-18 87.4
MsG0580028652.01.T01 AT3G59210 34.010 197 112 7 4 187 7 198 1.01e-18 87.4
MsG0580028652.01.T01 AT3G59210 34.010 197 112 7 4 187 7 198 1.01e-18 87.4
MsG0580028652.01.T01 AT3G59210 34.010 197 112 7 4 187 7 198 1.01e-18 87.4
MsG0580028652.01.T01 AT1G32375 25.408 429 231 13 4 352 2 421 1.22e-18 87.0
MsG0580028652.01.T01 AT1G32375 25.408 429 231 13 4 352 2 421 1.22e-18 87.0
MsG0580028652.01.T01 AT3G42770 34.555 191 109 7 6 182 1 189 1.27e-18 87.4
MsG0580028652.01.T01 AT5G53640 29.891 184 115 5 3 181 21 195 1.56e-18 84.0
MsG0580028652.01.T01 AT4G26340 24.471 425 237 15 4 352 2 418 1.75e-18 86.7
MsG0580028652.01.T01 AT5G38392 32.701 211 112 8 4 192 2 204 3.18e-18 82.8
MsG0580028652.01.T01 AT4G09920 31.892 185 116 5 4 182 2 182 1.07e-17 82.8
MsG0580028652.01.T01 AT4G09920 31.892 185 116 5 4 182 2 182 1.07e-17 82.8
MsG0580028652.01.T01 AT4G09920 31.892 185 116 5 4 182 2 182 1.07e-17 82.8
MsG0580028652.01.T01 AT4G09920 31.892 185 116 5 4 182 2 182 1.39e-17 82.8
MsG0580028652.01.T01 AT4G09920 31.892 185 116 5 4 182 2 182 1.39e-17 82.8
MsG0580028652.01.T01 AT3G58880 31.401 207 105 7 4 187 3 195 2.09e-17 83.6
MsG0580028652.01.T01 AT1G66290 27.928 222 136 5 4 221 29 230 2.42e-17 83.2
MsG0580028652.01.T01 AT5G56380 31.795 195 109 4 4 182 2 188 2.70e-17 83.2
MsG0580028652.01.T01 AT5G56380 31.795 195 109 4 4 182 2 188 2.70e-17 83.2
MsG0580028652.01.T01 AT5G56370 33.511 188 109 4 4 183 2 181 4.43e-17 81.3
MsG0580028652.01.T01 AT5G44950 32.850 207 110 8 1 194 1 191 7.55e-17 81.6
MsG0580028652.01.T01 AT2G42730 30.208 192 120 6 4 182 5 195 1.01e-16 81.6
MsG0580028652.01.T01 AT1G58310 30.986 213 112 8 4 187 8 214 1.16e-16 81.6
MsG0580028652.01.T01 AT3G58860 26.354 277 165 10 4 252 7 272 2.15e-16 80.5
MsG0580028652.01.T01 AT1G78750 29.744 195 126 4 4 188 18 211 2.37e-16 80.5
MsG0580028652.01.T01 AT1G78750 29.744 195 126 4 4 188 18 211 2.37e-16 80.5
MsG0580028652.01.T01 AT2G26030 31.746 189 110 6 4 182 4 183 2.48e-16 80.1
MsG0580028652.01.T01 AT2G26030 31.746 189 110 6 4 182 4 183 2.48e-16 80.1
MsG0580028652.01.T01 AT2G26030 31.746 189 110 6 4 182 4 183 2.82e-16 80.1
MsG0580028652.01.T01 AT5G38390 35.751 193 103 8 4 188 2 181 5.24e-16 79.3
MsG0580028652.01.T01 AT5G53840 31.000 200 115 6 3 194 17 201 5.64e-16 79.3
MsG0580028652.01.T01 AT3G03030 36.735 147 76 6 4 138 2 143 6.14e-16 78.2
MsG0580028652.01.T01 AT3G59230 29.648 199 115 7 4 182 12 205 7.23e-16 79.0
MsG0580028652.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 7.91e-16 79.0
MsG0580028652.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 7.91e-16 79.0
MsG0580028652.01.T01 AT1G16930 32.447 188 109 6 4 182 15 193 7.91e-16 79.0
MsG0580028652.01.T01 AT4G13960 32.948 173 95 7 4 161 2 168 8.12e-16 79.0
MsG0580028652.01.T01 AT4G13960 32.948 173 95 7 4 161 2 168 8.12e-16 79.0
MsG0580028652.01.T01 AT4G00315 31.579 190 114 7 4 182 2 186 2.24e-15 77.4
MsG0580028652.01.T01 AT3G49030 23.741 417 229 15 3 352 20 414 2.31e-15 77.4
MsG0580028652.01.T01 AT3G03030 36.735 147 76 6 4 138 2 143 2.35e-15 77.4
MsG0580028652.01.T01 AT3G59000 32.584 178 97 7 4 163 2 174 4.00e-15 76.6
MsG0580028652.01.T01 AT1G51370 29.319 191 107 4 3 182 18 191 8.90e-15 75.1
MsG0580028652.01.T01 AT1G51370 29.319 191 107 4 3 182 18 191 9.59e-15 75.5
MsG0580028652.01.T01 AT1G78760 29.612 206 122 6 3 198 15 207 1.00e-14 75.5
MsG0580028652.01.T01 AT3G52680 24.888 446 226 19 1 354 18 446 1.01e-14 75.5
MsG0580028652.01.T01 AT1G51370 29.319 191 107 4 3 182 18 191 1.07e-14 75.5
MsG0580028652.01.T01 AT3G49030 27.737 274 151 12 3 255 20 267 1.51e-14 74.7
MsG0580028652.01.T01 AT1G55660 32.161 199 101 7 4 182 53 237 1.64e-14 74.3
MsG0580028652.01.T01 AT3G03040 31.000 200 117 7 4 187 2 196 1.67e-14 74.7
MsG0580028652.01.T01 AT1G55660 32.161 199 101 7 4 182 53 237 2.19e-14 74.7
MsG0580028652.01.T01 AT3G59170 29.707 239 126 11 4 204 7 241 2.43e-14 74.3
MsG0580028652.01.T01 AT4G00160 30.890 191 117 7 1 182 13 197 2.49e-14 74.3
MsG0580028652.01.T01 AT5G56420 33.690 187 109 5 4 182 6 185 3.86e-14 73.6
MsG0580028652.01.T01 AT5G56420 33.690 187 109 5 4 182 6 185 3.86e-14 73.6
MsG0580028652.01.T01 AT5G56420 33.690 187 109 5 4 182 6 185 3.86e-14 73.6
MsG0580028652.01.T01 AT4G22280 32.632 190 106 7 4 182 2 180 5.38e-14 73.2
MsG0580028652.01.T01 AT2G26860 32.812 192 109 6 4 182 2 186 5.48e-14 73.2
MsG0580028652.01.T01 AT2G26860 32.812 192 109 6 4 182 2 186 5.48e-14 73.2
MsG0580028652.01.T01 AT4G22280 32.632 190 106 7 4 182 2 180 5.51e-14 72.4
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 29 209 5.74e-14 72.8
MsG0580028652.01.T01 AT5G22670 29.032 186 116 5 4 182 11 187 6.10e-14 73.2
MsG0580028652.01.T01 AT1G64540 32.796 186 106 8 6 186 7 178 6.11e-14 73.2
MsG0580028652.01.T01 AT1G64540 32.796 186 106 8 6 186 7 178 6.11e-14 73.2
MsG0580028652.01.T01 AT2G42720 33.679 193 110 9 4 182 2 190 6.80e-14 72.8
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 7.27e-14 72.4
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 7.27e-14 72.4
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 7.27e-14 72.4
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 7.27e-14 72.4
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 9.59e-14 71.6
MsG0580028652.01.T01 AT2G29910 30.729 192 113 4 4 186 5 185 9.59e-14 71.6
MsG0580028652.01.T01 AT5G44940 24.359 390 232 15 4 350 5 374 1.24e-13 71.6
MsG0580028652.01.T01 AT3G50710 29.319 191 116 6 4 182 2 185 1.44e-13 72.0
MsG0580028652.01.T01 AT5G53635 30.108 186 115 5 6 183 2 180 1.69e-13 71.6
MsG0580028652.01.T01 AT2G29930 30.270 185 115 4 4 182 12 188 1.73e-13 71.6
MsG0580028652.01.T01 AT2G29930 30.270 185 115 4 4 182 12 188 1.73e-13 71.6
MsG0580028652.01.T01 AT3G59160 29.915 234 130 9 4 204 13 245 1.75e-13 71.6
MsG0580028652.01.T01 AT2G04230 27.170 265 169 7 1 250 10 265 1.89e-13 71.6
MsG0580028652.01.T01 AT3G49150 33.663 202 105 9 4 187 16 206 2.25e-13 71.2
MsG0580028652.01.T01 AT5G60610 33.690 187 105 6 4 182 2 177 2.46e-13 70.9
MsG0580028652.01.T01 AT5G60610 33.690 187 105 6 4 182 2 177 2.46e-13 70.9
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 3.26e-13 70.1
MsG0580028652.01.T01 AT1G19070 43.902 82 46 0 4 85 2 83 3.65e-13 64.7
MsG0580028652.01.T01 AT5G44980 31.443 194 115 8 1 183 1 187 4.19e-13 70.5
MsG0580028652.01.T01 AT5G44980 31.443 194 115 8 1 183 1 187 4.19e-13 70.5
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.52e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.52e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.60e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.60e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.60e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 4.60e-13 70.1
MsG0580028652.01.T01 AT5G44980 31.443 194 115 8 1 183 1 187 5.04e-13 69.3
MsG0580028652.01.T01 AT5G44980 31.443 194 115 8 1 183 1 187 5.04e-13 69.3
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 21 209 5.05e-13 70.1
MsG0580028652.01.T01 AT1G06630 30.159 189 120 5 4 180 12 200 6.63e-13 70.1
MsG0580028652.01.T01 AT5G44960 22.449 392 218 13 4 320 5 385 7.23e-13 69.7
MsG0580028652.01.T01 AT2G27505 31.980 197 96 8 13 180 1 188 7.52e-13 68.9
MsG0580028652.01.T01 AT3G59250 31.606 193 90 7 4 188 7 165 7.57e-13 69.7
MsG0580028652.01.T01 AT5G44490 28.426 197 109 5 3 181 16 198 9.29e-13 69.3
MsG0580028652.01.T01 AT3G44810 32.308 195 107 7 6 182 9 196 9.72e-13 69.3
MsG0580028652.01.T01 AT5G44490 28.283 198 110 5 3 182 16 199 1.14e-12 69.3
MsG0580028652.01.T01 AT4G26350 31.443 194 106 8 4 183 2 182 1.19e-12 68.9
MsG0580028652.01.T01 AT5G38396 32.195 205 101 8 4 182 2 194 1.39e-12 68.9
MsG0580028652.01.T01 AT5G02930 32.258 186 111 8 4 185 28 202 1.45e-12 68.9
MsG0580028652.01.T01 AT5G22610 31.959 194 112 8 2 182 16 202 1.61e-12 68.9
MsG0580028652.01.T01 AT5G22610 31.959 194 112 8 2 182 16 202 1.67e-12 68.9
MsG0580028652.01.T01 AT5G38386 30.714 140 82 3 4 132 2 137 2.74e-12 67.8
MsG0580028652.01.T01 AT5G38386 30.714 140 82 3 4 132 2 137 2.74e-12 67.8
MsG0580028652.01.T01 AT4G13985 28.500 200 121 7 4 187 19 212 2.82e-12 68.2
MsG0580028652.01.T01 AT5G22660 28.365 208 130 7 3 204 12 206 3.46e-12 67.0
MsG0580028652.01.T01 AT5G22660 28.365 208 130 7 3 204 12 206 3.50e-12 67.8
MsG0580028652.01.T01 AT3G59000 32.520 123 69 3 4 117 2 119 3.51e-12 67.4
MsG0580028652.01.T01 AT5G22730 28.866 194 129 4 3 191 27 216 3.53e-12 67.8
MsG0580028652.01.T01 AT5G22730 28.866 194 129 4 3 191 27 216 3.53e-12 67.8
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 43 224 3.89e-12 67.4
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 6 187 3.93e-12 67.4
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 6 187 3.93e-12 67.4
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 6 187 3.93e-12 67.4
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 6 187 3.93e-12 67.4
MsG0580028652.01.T01 AT5G22730 28.866 194 129 4 3 191 27 216 4.23e-12 67.4
MsG0580028652.01.T01 AT5G22720 29.150 247 136 10 3 235 22 243 4.32e-12 67.4
MsG0580028652.01.T01 AT3G60040 28.643 199 122 4 4 182 13 211 4.35e-12 67.8
MsG0580028652.01.T01 AT5G22700 30.366 191 117 5 4 187 43 224 4.91e-12 67.4
MsG0580028652.01.T01 AT5G25860 28.261 230 135 8 4 207 12 237 5.06e-12 67.4
MsG0580028652.01.T01 AT1G48400 29.412 238 132 10 4 224 10 228 5.43e-12 67.4
MsG0580028652.01.T01 AT3G60040 28.500 200 123 4 4 183 230 429 5.46e-12 67.4
MsG0580028652.01.T01 AT3G60040 28.643 199 122 4 4 182 232 430 5.55e-12 67.4
MsG0580028652.01.T01 AT3G60040 28.500 200 123 4 4 183 232 431 5.72e-12 67.4
MsG0580028652.01.T01 AT4G27050 27.686 242 137 6 1 209 1 237 5.91e-12 67.0
MsG0580028652.01.T01 AT4G27050 27.686 242 137 6 1 209 1 237 5.91e-12 67.0
MsG0580028652.01.T01 AT4G27050 27.686 242 137 6 1 209 1 237 5.91e-12 67.0
MsG0580028652.01.T01 AT4G27050 27.686 242 137 6 1 209 1 237 5.91e-12 67.0
MsG0580028652.01.T01 AT4G27050 27.686 242 137 6 1 209 1 237 5.91e-12 67.0
MsG0580028652.01.T01 AT3G60040 28.643 199 122 4 4 182 233 431 5.91e-12 67.4
MsG0580028652.01.T01 AT1G48400 29.412 238 132 10 4 224 10 228 6.24e-12 67.0
MsG0580028652.01.T01 AT3G58950 40.476 84 47 2 4 85 2 84 6.85e-12 66.6
MsG0580028652.01.T01 AT3G52680 27.869 244 126 11 1 230 18 225 7.25e-12 66.2
MsG0580028652.01.T01 AT1G66310 27.222 180 128 2 4 182 19 196 9.31e-12 66.2
MsG0580028652.01.T01 AT3G58920 29.949 197 112 7 4 180 2 192 9.60e-12 66.2
MsG0580028652.01.T01 AT3G51530 23.129 441 239 15 1 354 27 454 9.75e-12 66.2
MsG0580028652.01.T01 AT5G56560 22.983 409 232 14 5 338 6 406 1.34e-11 65.9
MsG0580028652.01.T01 AT1G66300 28.177 181 125 3 4 182 29 206 1.53e-11 65.9
MsG0580028652.01.T01 AT5G38570 22.464 414 216 14 4 352 2 375 1.66e-11 65.5
MsG0580028652.01.T01 AT3G44090 21.308 413 236 10 9 346 29 427 2.09e-11 65.5
MsG0580028652.01.T01 AT3G58820 34.146 123 67 3 4 117 2 119 2.18e-11 65.1
MsG0580028652.01.T01 AT5G41630 28.922 204 110 7 4 182 12 205 2.20e-11 65.1
MsG0580028652.01.T01 AT5G56440 27.092 251 145 9 4 235 2 233 2.54e-11 65.1
MsG0580028652.01.T01 AT3G58900 26.570 207 124 6 4 192 2 198 2.80e-11 64.3
MsG0580028652.01.T01 AT3G58900 26.570 207 124 6 4 192 2 198 3.68e-11 63.9
MsG0580028652.01.T01 AT3G58900 26.570 207 124 6 4 192 2 198 3.68e-11 63.9
MsG0580028652.01.T01 AT5G56690 29.101 189 113 7 6 180 4 185 3.73e-11 64.3
MsG0580028652.01.T01 AT1G66320 24.186 215 146 5 9 221 35 234 4.03e-11 64.3
MsG0580028652.01.T01 AT3G58900 26.570 207 124 6 4 192 2 198 5.41e-11 63.9
MsG0580028652.01.T01 AT3G58960 30.151 199 113 8 4 187 2 189 6.03e-11 63.9
MsG0580028652.01.T01 AT5G56400 25.754 431 229 18 4 352 33 454 7.82e-11 63.5
MsG0580028652.01.T01 AT3G58940 27.358 212 121 8 4 190 2 205 8.87e-11 63.5
MsG0580028652.01.T01 AT3G58940 27.358 212 121 8 4 190 2 205 8.87e-11 63.5
MsG0580028652.01.T01 AT1G52650 32.386 176 93 8 4 161 2 169 9.12e-11 63.5

Find 57 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCAGTTTCTTCTCTTTCT+TGG 0.152095 5:-84390582 MsG0580028652.01.T01:CDS
TCTTGATGGTTGTCCAATTC+TGG 0.223628 5:-84390993 MsG0580028652.01.T01:CDS
AAACTAATATTCTTTCAAAA+AGG 0.269088 5:-84391426 MsG0580028652.01.T01:CDS
AGTATGATGCAGAGTTTAAA+AGG 0.282133 5:-84390925 MsG0580028652.01.T01:CDS
ATGCGTTCAGGAAAGATATC+TGG 0.303500 5:+84390556 None:intergenic
AAGCTCCAAATGCGTCAAAT+TGG 0.310602 5:+84390702 None:intergenic
TGTTGAATTCAACATCTTTA+CGG 0.316450 5:-84390456 MsG0580028652.01.T01:CDS
GCTTCAAAATCCTCCAGAAT+TGG 0.334575 5:+84390980 None:intergenic
TCTGCATTTCAAGCATCTCC+TGG 0.335813 5:+84390398 None:intergenic
AAGCATCTCCTGGGGATTCA+TGG 0.342810 5:+84390408 None:intergenic
TAAATTTGACTTGGTGTGAT+TGG 0.346933 5:-84390211 MsG0580028652.01.T01:three_prime_UTR
CTTAAAACTTTACATTTGAA+TGG 0.351562 5:-84391052 MsG0580028652.01.T01:CDS
AAATGTGAAGAGATGCGTTC+AGG 0.386690 5:+84390544 None:intergenic
TTTGTAGGAGAAACGTTAAC+TGG 0.395085 5:-84390678 MsG0580028652.01.T01:CDS
CGCATTTGGAGCTTATTTGT+AGG 0.403379 5:-84390693 MsG0580028652.01.T01:CDS
CTGCATTTCAAGCATCTCCT+GGG 0.406138 5:+84390399 None:intergenic
TTGCAGACTTCGTGCGGAAA+TGG 0.407014 5:+84391306 None:intergenic
TTACTATTGCAAATTCTTGA+TGG 0.408785 5:-84391007 MsG0580028652.01.T01:CDS
ACGATCATCAAAGTCGAGAT+TGG 0.415862 5:+84391378 None:intergenic
GTAGATCTATGGATTTGTTC+CGG 0.424665 5:-84390731 MsG0580028652.01.T01:intron
CATACTCATCTGTCGAGTTT+CGG 0.433854 5:+84390942 None:intergenic
AACATTGAAAACAGACAGAT+TGG 0.435616 5:+84390874 None:intergenic
ATGTGACAAATGATTTCATC+TGG 0.439083 5:+84391481 None:intergenic
CACATGTTGCTGAGCTCACT+GGG 0.460990 5:+84390359 None:intergenic
TCACATGTTGCTGAGCTCAC+TGG 0.463393 5:+84390358 None:intergenic
GTTTAAAAGGTTAACCAAGT+TGG 0.466768 5:-84390912 MsG0580028652.01.T01:CDS
CGATCATCAAAGTCGAGATT+GGG 0.483870 5:+84391379 None:intergenic
TGCACTATTGCAAATTATAG+AGG 0.485783 5:-84390514 MsG0580028652.01.T01:CDS
GTCTGCAAAATCCTATCAAA+AGG 0.485884 5:-84391291 MsG0580028652.01.T01:CDS
TCCTGGGGATTCATGGATGG+TGG 0.519792 5:+84390415 None:intergenic
TAGAATTATTAAATTTGACT+TGG 0.522633 5:-84390220 MsG0580028652.01.T01:three_prime_UTR
ACAATTAAAATTATGTCTAT+CGG 0.529749 5:+84391156 None:intergenic
TGCCGCTGCAGAACACGGAA+TGG 0.538475 5:-84391200 MsG0580028652.01.T01:CDS
TGATGGTTGTCCAATTCTGG+AGG 0.538761 5:-84390990 MsG0580028652.01.T01:CDS
AATGTCTGCCTTGACCAACT+TGG 0.542462 5:+84390898 None:intergenic
AAGGTTAACCAAGTTGGTCA+AGG 0.544767 5:-84390906 MsG0580028652.01.T01:CDS
CTGCAGATTACCGAAAATGA+TGG 0.547127 5:-84390253 MsG0580028652.01.T01:three_prime_UTR
TTCCATTCCGTGTTCTGCAG+CGG 0.552205 5:+84391198 None:intergenic
TGCGTTCAGGAAAGATATCT+GGG 0.552690 5:+84390557 None:intergenic
TGCATTTCAAGCATCTCCTG+GGG 0.556505 5:+84390400 None:intergenic
GTGTTTGATATATGATGTGT+TGG 0.570723 5:-84390656 MsG0580028652.01.T01:CDS
AAAAGCGTGGATAAAGTTCA+CGG 0.574246 5:+84391347 None:intergenic
GAATGCAGATGGTTGATGAT+CGG 0.577535 5:-84391516 None:intergenic
AGGTTCTGCCTCAGATGTGA+TGG 0.579009 5:-84391271 MsG0580028652.01.T01:CDS
TCCACCATCCATGAATCCCC+AGG 0.584757 5:-84390416 MsG0580028652.01.T01:CDS
ATCTCCTGGGGATTCATGGA+TGG 0.586261 5:+84390412 None:intergenic
TCGACTTTGATGATCGTCGA+TGG 0.587885 5:-84391372 MsG0580028652.01.T01:CDS
GAAACTGACGTTACAAGTTG+AGG 0.593130 5:+84390595 None:intergenic
CTTTCAACTTGAGAACGACA+AGG 0.596636 5:+84391116 None:intergenic
TGCGTCAAATTGGAAAACTC+CGG 0.598611 5:+84390712 None:intergenic
TAGAATTACCATCACATCTG+AGG 0.607202 5:+84391263 None:intergenic
TTAACTGCCGCTGCAGAACA+CGG 0.613007 5:-84391205 MsG0580028652.01.T01:CDS
GTCATGACATCAAGTTCTAG+TGG 0.642494 5:+84391232 None:intergenic
TTGGGAATTAAAAGTCGTAG+AGG 0.661173 5:+84391397 None:intergenic
TGAATTCAACATCTTTACGG+AGG 0.662411 5:-84390453 MsG0580028652.01.T01:CDS
TAGAACTTGATGTCATGACG+TGG 0.743686 5:-84391228 MsG0580028652.01.T01:CDS
TATCGGAAATATGAACATCG+AGG 0.748982 5:+84391173 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAATATTCTTTCAAAA+AGG - Chr5:84390293-84390312 MsG0580028652.01.T01:three_prime_UTR 15.0%
!! ACAATTAAAATTATGTCTAT+CGG + Chr5:84390566-84390585 None:intergenic 15.0%
!! TAGAATTATTAAATTTGACT+TGG - Chr5:84391499-84391518 MsG0580028652.01.T01:CDS 15.0%
!!! ATTAGTTTTAAAAACATCTT+CGG + Chr5:84390281-84390300 None:intergenic 15.0%
!! AAGAAATTCAACATTAGAAA+AGG + Chr5:84390880-84390899 None:intergenic 20.0%
!! CTTAAAACTTTACATTTGAA+TGG - Chr5:84390667-84390686 MsG0580028652.01.T01:CDS 20.0%
!! TTTCTAATGTTGAATTTCTT+CGG - Chr5:84390880-84390899 MsG0580028652.01.T01:CDS 20.0%
!!! AAAATATACACCATCATTTT+CGG + Chr5:84391479-84391498 None:intergenic 20.0%
!!! AAATGTAAAGTTTTAAGCAA+GGG + Chr5:84390664-84390683 None:intergenic 20.0%
! CTAATATTCTTTCAAAAAGG+TGG - Chr5:84390296-84390315 MsG0580028652.01.T01:three_prime_UTR 25.0%
! TGTTGAATTCAACATCTTTA+CGG - Chr5:84391263-84391282 MsG0580028652.01.T01:CDS 25.0%
! TTACTATTGCAAATTCTTGA+TGG - Chr5:84390712-84390731 MsG0580028652.01.T01:CDS 25.0%
!!! CAAATGTAAAGTTTTAAGCA+AGG + Chr5:84390665-84390684 None:intergenic 25.0%
AACATTAGAAAAGGCTTCAA+AGG + Chr5:84390871-84390890 None:intergenic 30.0%
AACATTGAAAACAGACAGAT+TGG + Chr5:84390848-84390867 None:intergenic 30.0%
ACTAAGCAAATTAGCGAAAT+TGG + Chr5:84390949-84390968 None:intergenic 30.0%
AGTATGATGCAGAGTTTAAA+AGG - Chr5:84390794-84390813 MsG0580028652.01.T01:intron 30.0%
ATGTGACAAATGATTTCATC+TGG + Chr5:84390241-84390260 None:intergenic 30.0%
GTGTTTGATATATGATGTGT+TGG - Chr5:84391063-84391082 MsG0580028652.01.T01:CDS 30.0%
GTTTAAAAGGTTAACCAAGT+TGG - Chr5:84390807-84390826 MsG0580028652.01.T01:intron 30.0%
TATACCATATACAAAAAGCG+TGG + Chr5:84390388-84390407 None:intergenic 30.0%
TGCACTATTGCAAATTATAG+AGG - Chr5:84391205-84391224 MsG0580028652.01.T01:CDS 30.0%
! TTTTGTTACCTGTAGATCTA+TGG - Chr5:84390977-84390996 MsG0580028652.01.T01:CDS 30.0%
!! GAGTTTATTTTTCTCGACAT+TGG - Chr5:84390689-84390708 MsG0580028652.01.T01:CDS 30.0%
!! TAAATTTGACTTGGTGTGAT+TGG - Chr5:84391508-84391527 MsG0580028652.01.T01:CDS 30.0%
!! TTATCCACGCTTTTTGTATA+TGG - Chr5:84390381-84390400 MsG0580028652.01.T01:CDS 30.0%
!! TTTTAAAAACATCTTCGGTC+GGG + Chr5:84390276-84390295 None:intergenic 30.0%
!!! AGAAGAAGTTTTTGAAGCTT+AGG + Chr5:84391097-84391116 None:intergenic 30.0%
!!! GTTTTAAAAACATCTTCGGT+CGG + Chr5:84390277-84390296 None:intergenic 30.0%
GAACAAATCCATAGATCTAC+AGG + Chr5:84390988-84391007 None:intergenic 35.0%
GTCTGCAAAATCCTATCAAA+AGG - Chr5:84390428-84390447 MsG0580028652.01.T01:CDS 35.0%
TAGAATTACCATCACATCTG+AGG + Chr5:84390459-84390478 None:intergenic 35.0%
TATCGGAAATATGAACATCG+AGG + Chr5:84390549-84390568 None:intergenic 35.0%
TGAATTCAACATCTTTACGG+AGG - Chr5:84391266-84391285 MsG0580028652.01.T01:CDS 35.0%
TTGGGAATTAAAAGTCGTAG+AGG + Chr5:84390325-84390344 None:intergenic 35.0%
TTTGTAGGAGAAACGTTAAC+TGG - Chr5:84391041-84391060 MsG0580028652.01.T01:CDS 35.0%
! AAAAGCGTGGATAAAGTTCA+CGG + Chr5:84390375-84390394 None:intergenic 35.0%
! GTAGATCTATGGATTTGTTC+CGG - Chr5:84390988-84391007 MsG0580028652.01.T01:CDS 35.0%
! GTTTTCCAATTTGACGCATT+TGG - Chr5:84391012-84391031 MsG0580028652.01.T01:CDS 35.0%
!!! GTAAAGTTTTAAGCAAGGGA+AGG + Chr5:84390660-84390679 None:intergenic 35.0%
AAATGTGAAGAGATGCGTTC+AGG + Chr5:84391178-84391197 None:intergenic 40.0%
AAGCTCCAAATGCGTCAAAT+TGG + Chr5:84391020-84391039 None:intergenic 40.0%
ACGATCATCAAAGTCGAGAT+TGG + Chr5:84390344-84390363 None:intergenic 40.0%
ATGCGTTCAGGAAAGATATC+TGG + Chr5:84391166-84391185 None:intergenic 40.0%
CATACTCATCTGTCGAGTTT+CGG + Chr5:84390780-84390799 None:intergenic 40.0%
CGATCATCAAAGTCGAGATT+GGG + Chr5:84390343-84390362 None:intergenic 40.0%
CGTCAGTTTCTTCTCTTTCT+TGG - Chr5:84391137-84391156 MsG0580028652.01.T01:CDS 40.0%
CTGCAGATTACCGAAAATGA+TGG - Chr5:84391466-84391485 MsG0580028652.01.T01:CDS 40.0%
CTTTCAACTTGAGAACGACA+AGG + Chr5:84390606-84390625 None:intergenic 40.0%
GAAACTGACGTTACAAGTTG+AGG + Chr5:84391127-84391146 None:intergenic 40.0%
GCTTCAAAATCCTCCAGAAT+TGG + Chr5:84390742-84390761 None:intergenic 40.0%
TAGAACTTGATGTCATGACG+TGG - Chr5:84390491-84390510 MsG0580028652.01.T01:CDS 40.0%
TGAATTTCTTCGGCTAGAAG+AGG - Chr5:84390890-84390909 MsG0580028652.01.T01:CDS 40.0%
TGCGTCAAATTGGAAAACTC+CGG + Chr5:84391010-84391029 None:intergenic 40.0%
TGCGTTCAGGAAAGATATCT+GGG + Chr5:84391165-84391184 None:intergenic 40.0%
! CGCATTTGGAGCTTATTTGT+AGG - Chr5:84391026-84391045 MsG0580028652.01.T01:CDS 40.0%
! GTCATGACATCAAGTTCTAG+TGG + Chr5:84390490-84390509 None:intergenic 40.0%
! TCTTGATGGTTGTCCAATTC+TGG - Chr5:84390726-84390745 MsG0580028652.01.T01:CDS 40.0%
!! AAGGTTAACCAAGTTGGTCA+AGG - Chr5:84390813-84390832 MsG0580028652.01.T01:intron 40.0%
AATGTCTGCCTTGACCAACT+TGG + Chr5:84390824-84390843 None:intergenic 45.0%
CTGCATTTCAAGCATCTCCT+GGG + Chr5:84391323-84391342 None:intergenic 45.0%
TCTGCATTTCAAGCATCTCC+TGG + Chr5:84391324-84391343 None:intergenic 45.0%
TGATGGTTGTCCAATTCTGG+AGG - Chr5:84390729-84390748 MsG0580028652.01.T01:CDS 45.0%
TGCATTTCAAGCATCTCCTG+GGG + Chr5:84391322-84391341 None:intergenic 45.0%
! AGGATTTTGCAGACTTCGTG+CGG + Chr5:84390422-84390441 None:intergenic 45.0%
! CTGAGGCAGAACCTTTTGAT+AGG + Chr5:84390442-84390461 None:intergenic 45.0%
! TCGACTTTGATGATCGTCGA+TGG - Chr5:84390347-84390366 MsG0580028652.01.T01:CDS 45.0%
AAGCATCTCCTGGGGATTCA+TGG + Chr5:84391314-84391333 None:intergenic 50.0%
AGGTTCTGCCTCAGATGTGA+TGG - Chr5:84390448-84390467 MsG0580028652.01.T01:CDS 50.0%
ATCTCCTGGGGATTCATGGA+TGG + Chr5:84391310-84391329 None:intergenic 50.0%
CACATGTTGCTGAGCTCACT+GGG + Chr5:84391363-84391382 None:intergenic 50.0%
TCACATGTTGCTGAGCTCAC+TGG + Chr5:84391364-84391383 None:intergenic 50.0%
TTAACTGCCGCTGCAGAACA+CGG - Chr5:84390514-84390533 MsG0580028652.01.T01:CDS 50.0%
TTCCATTCCGTGTTCTGCAG+CGG + Chr5:84390524-84390543 None:intergenic 50.0%
TTGCAGACTTCGTGCGGAAA+TGG + Chr5:84390416-84390435 None:intergenic 50.0%
TCCACCATCCATGAATCCCC+AGG - Chr5:84391303-84391322 MsG0580028652.01.T01:CDS 55.0%
TCCTGGGGATTCATGGATGG+TGG + Chr5:84391307-84391326 None:intergenic 55.0%
TGCCGCTGCAGAACACGGAA+TGG - Chr5:84390519-84390538 MsG0580028652.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 84390211 84391530 84390211 ID=MsG0580028652.01;Name=MsG0580028652.01
Chr5 mRNA 84390211 84391530 84390211 ID=MsG0580028652.01.T01;Parent=MsG0580028652.01;Name=MsG0580028652.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0.5|1|1|1|2|125|355
Chr5 exon 84390211 84390749 84390211 ID=MsG0580028652.01.T01:exon:717;Parent=MsG0580028652.01.T01
Chr5 exon 84390877 84391530 84390877 ID=MsG0580028652.01.T01:exon:716;Parent=MsG0580028652.01.T01
Chr5 CDS 84390877 84391530 84390877 ID=MsG0580028652.01.T01:cds;Parent=MsG0580028652.01.T01
Chr5 CDS 84390336 84390749 84390336 ID=MsG0580028652.01.T01:cds;Parent=MsG0580028652.01.T01
Chr5 three_prime_UTR 84390211 84390335 84390211 ID=MsG0580028652.01.T01:three_prime_utr;Parent=MsG0580028652.01.T01
Gene Sequence

>MsG0580028652.01.T01

ATGGTTGATGATCGGATTAGTGCATTGCCAGATGAAATCATTTGTCACATTCTCTCTTTTGTCCCGACCGAAGATGTTTTTAAAACTAATATTCTTTCAAAAAGGTGGAGACCTCTACGACTTTTAATTCCCAATCTCGACTTTGATGATCGTCGATGGAGCCGTGAACTTTATCCACGCTTTTTGTATATGGTATATGCTACCATTTCCGCACGAAGTCTGCAAAATCCTATCAAAAGGTTCTGCCTCAGATGTGATGGTAATTCTATTTACGAGCCACTAGAACTTGATGTCATGACGTGGTTAACTGCCGCTGCAGAACACGGAATGGAACACCTCGATGTTCATATTTCCGATAGACATAATTTTAATTGTGTTTTTAGCTTCAAAAACCTTGTCGTTCTCAAGTTGAAAGTGATACACATTACAACTACTTTATCAGTTGACCTTCCCTTGCTTAAAACTTTACATTTGAATGGAGTTTATTTTTCTCGACATTGGTTACTATTGCAAATTCTTGATGGTTGTCCAATTCTGGAGGATTTTGAAGCAAAAAATATATTTGTCCGAAACTCGACAGATGAGTATGATGCAGAGTTTAAAAGGTTAACCAAGTTGGTCAAGGCAGACATTTCCAATCTGTCTGTTTTCAATATCTATGGATTTGTTCCGGAGTTTTCCAATTTGACGCATTTGGAGCTTATTTGTAGGAGAAACGTTAACTGGTGTTTGATATATGATGTGTTGGAGAAATGTCCTAAGCTTCAAAAACTTCTTCTTGATATGCCTCAACTTGTAACGTCAGTTTCTTCTCTTTCTTGGTTCCCAGATATCTTTCCTGAACGCATCTCTTCACATTTCAAAGAGTGCACTATTGCAAATTATAGAGGACAACATCATGAGTTGCAATTTGTACAATATATTATGTTGAATTCAACATCTTTACGGAGGATAACAATATGCAGTCCACCATCCATGAATCCCCAGGAGATGCTTGAAATGCAGAAAGAGTTATCGTTCTTCCCAGTGAGCTCAGCAACATGTGAAGTTAATTTTAAATTTGTTTGA

Protein sequence

>MsG0580028652.01.T01

MVDDRISALPDEIICHILSFVPTEDVFKTNILSKRWRPLRLLIPNLDFDDRRWSRELYPRFLYMVYATISARSLQNPIKRFCLRCDGNSIYEPLELDVMTWLTAAAEHGMEHLDVHISDRHNFNCVFSFKNLVVLKLKVIHITTTLSVDLPLLKTLHLNGVYFSRHWLLLQILDGCPILEDFEAKNIFVRNSTDEYDAEFKRLTKLVKADISNLSVFNIYGFVPEFSNLTHLELICRRNVNWCLIYDVLEKCPKLQKLLLDMPQLVTSVSSLSWFPDIFPERISSHFKECTIANYRGQHHELQFVQYIMLNSTSLRRITICSPPSMNPQEMLEMQKELSFFPVSSATCEVNFKFV*