AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036082.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036082.01.T01 MTR_7g007340 69.811 265 77 1 13 277 1 262 2.35e-120 352
MsG0780036082.01.T01 MTR_7g007370 59.328 268 86 3 15 277 2 251 3.60e-96 290
MsG0780036082.01.T01 MTR_2g007400 51.140 307 105 7 15 278 2 306 1.52e-83 260
MsG0780036082.01.T01 MTR_3g099830 54.745 274 113 3 15 277 2 275 3.79e-82 255
MsG0780036082.01.T01 MTR_2g007360 52.518 278 110 8 15 278 2 271 5.13e-75 237
MsG0780036082.01.T01 MTR_2g005990 47.138 297 116 6 21 277 2 297 3.18e-73 233
MsG0780036082.01.T01 MTR_2g008310 48.239 284 116 7 24 277 1 283 3.86e-70 225
MsG0780036082.01.T01 MTR_2g008320 47.458 295 116 7 19 277 46 337 2.45e-68 222
MsG0780036082.01.T01 MTR_5g083890 43.333 300 123 5 25 277 6 305 2.18e-64 213
MsG0780036082.01.T01 MTR_1g107385 40.000 305 133 7 20 277 27 328 7.61e-54 183
MsG0780036082.01.T01 MTR_7g075820 39.333 300 134 6 25 277 6 304 2.92e-53 181
MsG0780036082.01.T01 MTR_2g007450 35.860 343 150 10 4 284 2 336 5.44e-49 171
MsG0780036082.01.T01 MTR_2g007090 40.780 282 92 5 18 290 3 218 4.25e-47 162
MsG0780036082.01.T01 MTR_2g007500 38.380 284 149 7 20 277 9 292 1.00e-40 146
MsG0780036082.01.T01 MTR_3g107100 37.457 291 140 7 25 278 11 296 6.50e-40 146
MsG0780036082.01.T01 MTR_1g053025 35.644 303 142 9 24 277 1 299 1.02e-36 137
MsG0780036082.01.T01 MTR_1g041245 34.333 300 154 8 13 277 1 292 7.46e-35 132
MsG0780036082.01.T01 MTR_5g073420 38.462 286 129 11 24 273 10 284 3.30e-34 130
MsG0780036082.01.T01 MTR_3g026920 34.615 312 145 10 19 276 13 319 3.06e-33 128
MsG0780036082.01.T01 MTR_7g083740 34.657 277 167 5 7 277 4 272 8.47e-33 126
MsG0780036082.01.T01 MTR_3g107160 34.680 297 151 8 19 277 4 295 9.55e-33 126
MsG0780036082.01.T01 MTR_7g056287 33.099 284 150 9 25 275 3 279 1.59e-32 125
MsG0780036082.01.T01 MTR_3g107120 37.333 300 140 10 21 275 5 301 3.09e-32 125
MsG0780036082.01.T01 MTR_7g056277 33.688 282 147 9 25 273 259 533 5.29e-32 127
MsG0780036082.01.T01 MTR_7g033470 53.543 127 38 4 18 138 5 116 3.20e-30 113
MsG0780036082.01.T01 MTR_7g098570 36.808 307 137 13 13 273 2 297 2.45e-29 118
MsG0780036082.01.T01 MTR_1089s0010 34.602 289 140 11 21 271 4 281 5.69e-29 115
MsG0780036082.01.T01 MTR_5g045170 31.894 301 156 9 16 273 2 296 6.11e-29 116
MsG0780036082.01.T01 MTR_7g007080 34.014 294 150 10 23 278 2 289 4.03e-28 114
MsG0780036082.01.T01 MTR_6g045333 33.131 329 165 14 4 284 39 360 5.01e-28 114
MsG0780036082.01.T01 MTR_3g040700 32.595 316 156 12 1 277 18 315 1.59e-27 112
MsG0780036082.01.T01 MTR_7g056433 33.003 303 159 12 13 277 1 297 2.06e-27 111
MsG0780036082.01.T01 MTR_5g058100 31.561 301 161 10 18 279 2 296 2.14e-27 111
MsG0780036082.01.T01 MTR_4g098590 33.788 293 152 7 27 278 1 292 5.98e-27 110
MsG0780036082.01.T01 MTR_5g061680 32.982 285 128 10 24 273 10 266 6.91e-27 109
MsG0780036082.01.T01 MTR_6g040270 32.180 289 153 9 21 273 4 285 2.01e-26 108
MsG0780036082.01.T01 MTR_3g108560 33.448 290 150 11 23 278 18 298 2.27e-26 107
MsG0780036082.01.T01 MTR_3g108560 33.448 290 150 11 23 278 18 298 3.96e-26 108
MsG0780036082.01.T01 MTR_2g007530 32.509 283 138 10 19 278 13 265 4.97e-26 107
MsG0780036082.01.T01 MTR_3g108150 32.248 307 155 11 13 278 1 295 7.41e-26 107
MsG0780036082.01.T01 MTR_7g098510 32.986 288 156 9 21 275 14 297 7.87e-25 104
MsG0780036082.01.T01 MTR_3g023630 35.088 285 141 10 22 271 5 280 1.73e-24 103
MsG0780036082.01.T01 MTR_0009s0080 32.215 298 154 10 21 275 14 306 2.03e-24 103
MsG0780036082.01.T01 MTR_3g071850 31.366 322 162 12 4 275 2 314 2.83e-24 105
MsG0780036082.01.T01 MTR_2g007550 31.707 287 137 9 20 285 9 257 5.35e-24 101
MsG0780036082.01.T01 MTR_6g022360 33.922 283 142 10 24 273 42 312 5.66e-24 102
MsG0780036082.01.T01 MTR_5g058000 33.893 298 149 14 18 279 2 287 7.93e-24 101
MsG0780036082.01.T01 MTR_7g032380 30.033 303 135 10 13 277 1 264 8.53e-24 101
MsG0780036082.01.T01 MTR_6g011460 34.014 294 136 13 24 273 45 324 8.70e-24 102
MsG0780036082.01.T01 MTR_3g036250 32.069 290 143 8 25 277 5 277 2.28e-23 100
MsG0780036082.01.T01 MTR_3g095600 36.239 218 119 8 24 229 3 212 2.80e-23 98.6
MsG0780036082.01.T01 MTR_7g075800 30.938 320 160 13 18 278 2 319 4.23e-23 101
MsG0780036082.01.T01 MTR_1g085120 32.997 297 152 12 25 279 179 470 4.28e-23 100
MsG0780036082.01.T01 MTR_7g055943 33.654 312 159 13 5 273 15 321 5.09e-23 100
MsG0780036082.01.T01 MTR_5g073340 32.258 279 159 8 19 277 2 270 6.16e-23 98.2
MsG0780036082.01.T01 MTR_7g098480 34.602 289 144 11 21 273 14 293 7.84e-23 99.8
MsG0780036082.01.T01 MTR_5g073370 31.399 293 144 11 25 273 5 284 8.52e-23 99.0
MsG0780036082.01.T01 MTR_1g066830 32.423 293 149 11 22 271 5 291 8.86e-23 98.6
MsG0780036082.01.T01 MTR_4g039440 33.446 296 138 13 24 273 33 315 1.24e-22 98.6
MsG0780036082.01.T01 MTR_2g007460 51.020 98 30 2 15 109 2 84 2.05e-22 91.3
MsG0780036082.01.T01 MTR_3g105060 30.824 279 162 6 20 271 9 283 3.51e-22 97.1
MsG0780036082.01.T01 MTR_3g467400 31.984 247 127 4 25 232 3 247 4.72e-22 96.3
MsG0780036082.01.T01 MTR_6g029350 52.778 108 46 4 173 277 2 107 6.16e-22 93.6
MsG0780036082.01.T01 MTR_7g033915 28.421 285 164 8 20 278 6 276 7.64e-22 95.9
MsG0780036082.01.T01 MTR_7g034115 33.333 303 152 11 13 277 1 291 1.19e-21 95.5
MsG0780036082.01.T01 MTR_1g085120 32.765 293 150 12 25 275 167 454 1.76e-21 96.3
MsG0780036082.01.T01 MTR_1g085120 32.765 293 150 12 25 275 92 379 2.49e-21 95.5
MsG0780036082.01.T01 MTR_7g026500 32.581 310 149 12 11 273 5 301 6.04e-21 93.6
MsG0780036082.01.T01 MTR_1g108820 30.675 326 171 14 14 295 3 317 6.79e-21 92.8
MsG0780036082.01.T01 MTR_5g008950 31.475 305 159 12 27 301 1 285 6.80e-21 93.2
MsG0780036082.01.T01 MTR_7g033990 30.033 303 166 9 13 278 1 294 9.51e-21 93.2
MsG0780036082.01.T01 MTR_7g115270 29.568 301 162 8 25 277 12 310 1.40e-20 92.4
MsG0780036082.01.T01 MTR_5g045510 28.996 269 156 7 16 253 3 267 1.65e-20 92.0
MsG0780036082.01.T01 MTR_1g108800 31.502 273 140 12 14 268 3 246 4.86e-20 90.5
MsG0780036082.01.T01 MTR_1g108820 30.519 308 160 13 14 278 3 299 2.36e-19 89.0
MsG0780036082.01.T01 MTR_8g085430 34.197 193 92 5 24 184 10 199 3.05e-19 87.8
MsG0780036082.01.T01 MTR_0492s0020 31.271 291 146 11 25 278 86 359 3.92e-19 88.6
MsG0780036082.01.T01 MTR_0543s0010 31.271 291 146 11 25 278 86 359 4.07e-19 88.6
MsG0780036082.01.T01 MTR_5g007410 29.431 299 166 9 19 275 20 315 2.19e-18 86.7
MsG0780036082.01.T01 MTR_7g088260 28.803 309 173 11 2 273 69 367 2.25e-18 86.7
MsG0780036082.01.T01 MTR_6g022500 29.655 290 161 8 24 275 100 384 4.60e-18 85.9
MsG0780036082.01.T01 MTR_7g056447 34.426 183 98 4 20 181 4 185 4.75e-18 84.0
MsG0780036082.01.T01 MTR_5g082930 47.727 88 41 2 27 109 17 104 6.14e-18 82.0
MsG0780036082.01.T01 MTR_5g008920 29.861 288 166 8 19 275 6 288 1.93e-17 83.2
MsG0780036082.01.T01 MTR_7g032370 28.520 277 146 9 36 277 1 260 2.31e-17 82.8
MsG0780036082.01.T01 MTR_6g044560 28.750 320 143 12 16 273 169 465 8.65e-17 82.0
MsG0780036082.01.T01 MTR_2g036470 27.778 342 201 12 25 326 14 349 1.36e-16 80.9
MsG0780036082.01.T01 MTR_3g087260 34.946 186 91 4 25 193 12 184 1.49e-16 81.3
MsG0780036082.01.T01 MTR_7g114710 30.847 295 138 11 13 271 1 265 2.44e-16 79.7
MsG0780036082.01.T01 MTR_7g056420 27.759 299 143 10 20 277 4 270 6.57e-16 79.7
MsG0780036082.01.T01 MTR_5g039450 26.736 288 172 8 21 278 2 280 8.15e-16 78.2
MsG0780036082.01.T01 MTR_7g056430 27.759 299 143 10 20 277 4 270 8.42e-16 79.7
MsG0780036082.01.T01 MTR_5g058350 35.028 177 89 5 21 186 4 165 1.22e-15 74.7
MsG0780036082.01.T01 MTR_7g034110 29.352 293 130 10 20 278 6 255 2.11e-15 77.0
MsG0780036082.01.T01 MTR_4g056020 32.124 193 105 5 20 186 4 196 3.18e-15 77.0
MsG0780036082.01.T01 MTR_6g044572 28.431 306 146 10 24 273 1 289 5.24e-15 76.3
MsG0780036082.01.T01 MTR_4g134150 30.047 213 110 7 14 199 3 203 1.62e-14 72.8
MsG0780036082.01.T01 MTR_5g065100 31.982 222 116 6 13 209 1 212 2.30e-14 74.3
MsG0780036082.01.T01 MTR_7g034090 31.047 277 113 13 25 277 4 226 2.81e-14 73.9
MsG0780036082.01.T01 MTR_1g077420 30.047 213 116 9 25 210 4 210 5.68e-14 71.6
MsG0780036082.01.T01 MTR_7g033945 34.706 170 79 4 20 160 6 172 6.22e-14 69.7
MsG0780036082.01.T01 MTR_8g468810 30.222 225 118 8 7 197 7 226 8.95e-14 72.0
MsG0780036082.01.T01 MTR_8g468810 30.222 225 118 8 7 197 7 226 1.03e-13 71.6
MsG0780036082.01.T01 MTR_3g082890 30.449 312 153 12 21 278 13 314 1.13e-13 72.4
MsG0780036082.01.T01 MTR_8g468810 30.222 225 118 8 7 197 7 226 1.23e-13 72.0
MsG0780036082.01.T01 MTR_8g468810 30.222 225 118 8 7 197 7 226 1.25e-13 71.6
MsG0780036082.01.T01 MTR_5g084070 29.909 331 153 17 23 278 11 337 1.58e-13 72.0
MsG0780036082.01.T01 MTR_5g039950 27.273 319 167 11 25 283 23 336 1.87e-13 71.6
MsG0780036082.01.T01 MTR_5g039970 30.374 214 110 7 25 206 19 225 1.95e-13 70.9
MsG0780036082.01.T01 MTR_8g468810 30.222 225 118 8 7 197 7 226 2.21e-13 71.6
MsG0780036082.01.T01 MTR_3g110010 34.021 194 102 4 13 184 1 190 2.49e-13 71.6
MsG0780036082.01.T01 MTR_3g109982 34.615 182 93 4 25 184 13 190 2.63e-13 71.6
MsG0780036082.01.T01 MTR_4g056030 31.250 192 106 5 20 185 4 195 2.68e-13 71.2
MsG0780036082.01.T01 MTR_2g007100 64.444 45 16 0 24 68 1 45 2.87e-13 65.1
MsG0780036082.01.T01 MTR_5g087940 29.744 195 122 5 25 218 26 206 3.01e-13 70.9
MsG0780036082.01.T01 MTR_8g465650 32.065 184 84 5 22 169 9 187 3.49e-13 70.5
MsG0780036082.01.T01 MTR_3g082890 30.990 313 148 12 21 277 93 393 3.87e-13 70.9
MsG0780036082.01.T01 MTR_3g023470 52.239 67 32 0 25 91 15 81 7.50e-13 69.7
MsG0780036082.01.T01 MTR_8g014180 60.417 48 19 0 14 61 6 53 8.82e-13 63.2
MsG0780036082.01.T01 MTR_7g022105 31.338 284 157 11 25 273 49 329 1.49e-12 68.9
MsG0780036082.01.T01 MTR_4g056040 30.493 223 97 7 20 185 4 225 1.80e-12 68.9
MsG0780036082.01.T01 MTR_2g083840 31.220 205 104 7 18 187 14 216 1.86e-12 68.6
MsG0780036082.01.T01 MTR_7g033940 52.308 65 31 0 27 91 96 160 2.02e-12 66.2
MsG0780036082.01.T01 MTR_5g061410 31.365 271 148 10 27 273 7 263 2.07e-12 67.0
MsG0780036082.01.T01 MTR_4g051510 32.984 191 114 5 25 214 35 212 2.30e-12 67.8
MsG0780036082.01.T01 MTR_8g014160 27.957 279 147 10 3 238 19 286 2.39e-12 68.2
MsG0780036082.01.T01 MTR_2g103680 57.143 56 20 1 13 68 1 52 3.75e-12 63.5
MsG0780036082.01.T01 MTR_1g492880 44.330 97 50 2 23 117 4 98 4.85e-12 62.4
MsG0780036082.01.T01 MTR_1g095750 40.000 95 57 0 8 102 29 123 5.99e-12 63.2
MsG0780036082.01.T01 MTR_7g098590 46.341 82 42 1 21 102 14 93 6.40e-12 62.8
MsG0780036082.01.T01 MTR_3g113782 61.224 49 19 0 23 71 15 63 7.09e-12 61.6
MsG0780036082.01.T01 MTR_3g023270 32.143 168 89 5 23 169 10 173 7.55e-12 66.2
MsG0780036082.01.T01 MTR_5g044800 29.362 235 114 7 7 214 11 220 7.75e-12 66.6
MsG0780036082.01.T01 MTR_8g058965 29.680 219 107 8 13 186 1 217 8.29e-12 66.6
MsG0780036082.01.T01 MTR_6g088705 30.769 208 131 6 15 214 10 212 9.44e-12 64.7
MsG0780036082.01.T01 MTR_8g465380 30.220 182 89 5 22 169 9 186 1.24e-11 65.9
MsG0780036082.01.T01 MTR_5g044860 29.362 235 114 7 7 214 11 220 1.47e-11 65.9
MsG0780036082.01.T01 MTR_8g445780 29.268 205 107 5 13 185 1 199 1.55e-11 65.5
MsG0780036082.01.T01 MTR_1g038710 32.143 196 99 6 20 183 14 207 2.04e-11 65.5
MsG0780036082.01.T01 MTR_1g492880 44.681 94 48 2 23 114 4 95 2.16e-11 60.5
MsG0780036082.01.T01 MTR_8g070950 30.198 202 105 6 14 185 4 199 2.38e-11 65.1
MsG0780036082.01.T01 MTR_7g084080 28.155 206 132 7 18 213 10 209 2.39e-11 64.3
MsG0780036082.01.T01 MTR_7g056280 43.478 92 45 3 23 110 4 92 2.51e-11 65.5
MsG0780036082.01.T01 MTR_8g066650 49.296 71 36 0 21 91 76 146 3.02e-11 65.1
MsG0780036082.01.T01 MTR_3g463830 32.584 178 89 6 25 175 63 236 3.88e-11 64.3
MsG0780036082.01.T01 MTR_8g062080 28.141 199 107 7 19 185 17 211 4.24e-11 64.3
MsG0780036082.01.T01 MTR_4g092360 31.250 176 91 6 25 173 50 222 4.82e-11 64.3
MsG0780036082.01.T01 MTR_4g092430 38.235 102 55 2 25 126 43 136 7.69e-11 63.5
MsG0780036082.01.T01 MTR_4g023670 24.571 350 192 9 23 341 120 428 7.73e-11 63.5
MsG0780036082.01.T01 MTR_4g092430 38.235 102 55 2 25 126 43 136 7.75e-11 63.5
MsG0780036082.01.T01 MTR_3g019240 32.075 212 107 8 7 181 6 217 8.46e-11 63.2
MsG0780036082.01.T01 MTR_8g468910 31.818 176 83 5 21 164 44 214 8.51e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036082.01.T01 AT5G56420 37.912 182 88 5 25 183 6 185 8.85e-22 96.3
MsG0780036082.01.T01 AT5G56420 37.912 182 88 5 25 183 6 185 8.85e-22 96.3
MsG0780036082.01.T01 AT5G56420 37.912 182 88 5 25 183 6 185 8.85e-22 96.3
MsG0780036082.01.T01 AT4G10400 37.097 186 87 5 24 183 1 182 1.78e-21 95.5
MsG0780036082.01.T01 AT4G10400 37.097 186 87 5 24 183 1 182 1.78e-21 95.5
MsG0780036082.01.T01 AT4G10400 37.097 186 87 5 24 183 1 182 1.78e-21 95.5
MsG0780036082.01.T01 AT3G58860 31.618 272 135 11 21 254 3 261 2.26e-21 95.5
MsG0780036082.01.T01 AT4G09920 36.559 186 88 5 24 183 1 182 4.82e-21 92.4
MsG0780036082.01.T01 AT4G09920 36.559 186 88 5 24 183 1 182 4.82e-21 92.4
MsG0780036082.01.T01 AT4G09920 36.559 186 88 5 24 183 1 182 4.82e-21 92.4
MsG0780036082.01.T01 AT4G09920 36.559 186 88 5 24 183 1 182 7.51e-21 92.4
MsG0780036082.01.T01 AT4G09920 36.559 186 88 5 24 183 1 182 7.51e-21 92.4
MsG0780036082.01.T01 AT4G14103 35.821 201 83 7 21 185 4 194 3.86e-20 91.7
MsG0780036082.01.T01 AT4G14103 35.821 201 83 7 21 185 4 194 5.77e-20 90.5
MsG0780036082.01.T01 AT4G14103 35.821 201 83 7 21 185 4 194 5.77e-20 90.5
MsG0780036082.01.T01 AT4G14096 36.792 212 98 8 25 206 8 213 1.07e-19 90.5
MsG0780036082.01.T01 AT4G14096 36.792 212 98 8 25 206 8 213 1.07e-19 90.5
MsG0780036082.01.T01 AT5G56370 35.165 182 90 4 24 181 1 178 1.21e-19 89.0
MsG0780036082.01.T01 AT5G56370 35.165 182 90 4 24 181 1 178 2.21e-19 89.4
MsG0780036082.01.T01 AT5G56370 35.165 182 90 4 24 181 1 178 2.21e-19 89.4
MsG0780036082.01.T01 AT3G59200 34.272 213 106 8 25 206 7 216 3.98e-19 88.2
MsG0780036082.01.T01 AT2G26860 35.602 191 93 5 24 186 1 189 1.41e-18 87.0
MsG0780036082.01.T01 AT2G26860 35.602 191 93 5 24 186 1 189 1.41e-18 87.0
MsG0780036082.01.T01 AT3G59200 34.272 213 106 8 25 206 7 216 1.76e-18 87.0
MsG0780036082.01.T01 AT3G50710 34.896 192 90 6 24 185 1 187 3.20e-18 85.9
MsG0780036082.01.T01 AT5G22720 28.807 243 140 6 19 232 17 255 4.97e-18 85.5
MsG0780036082.01.T01 AT3G58880 36.041 197 85 6 24 185 2 192 5.99e-18 85.5
MsG0780036082.01.T01 AT5G60610 35.204 196 100 7 24 198 1 190 7.08e-18 84.7
MsG0780036082.01.T01 AT5G60610 35.204 196 100 7 24 198 1 190 7.08e-18 84.7
MsG0780036082.01.T01 AT3G52680 31.551 187 100 4 25 186 21 204 7.82e-18 84.3
MsG0780036082.01.T01 AT5G38590 33.871 186 97 6 24 186 1 183 1.30e-17 82.8
MsG0780036082.01.T01 AT1G55660 32.461 191 93 4 24 183 52 237 1.42e-17 83.6
MsG0780036082.01.T01 AT5G22670 34.595 185 91 4 25 185 11 189 1.48e-17 84.0
MsG0780036082.01.T01 AT3G52680 31.551 187 100 4 25 186 21 204 1.48e-17 84.3
MsG0780036082.01.T01 AT1G55660 32.979 188 96 3 24 183 52 237 1.84e-17 84.0
MsG0780036082.01.T01 AT5G53840 32.432 222 122 5 11 211 4 218 2.97e-17 83.2
MsG0780036082.01.T01 AT5G56380 32.411 253 122 8 24 231 1 249 3.40e-17 83.2
MsG0780036082.01.T01 AT5G56380 32.411 253 122 8 24 231 1 249 3.40e-17 83.2
MsG0780036082.01.T01 AT1G69630 34.872 195 91 6 20 185 13 200 4.54e-17 82.8
MsG0780036082.01.T01 AT4G22280 35.106 188 90 5 24 185 1 182 7.59e-17 80.9
MsG0780036082.01.T01 AT1G78750 32.020 203 93 7 20 185 13 207 1.14e-16 81.6
MsG0780036082.01.T01 AT1G78750 32.020 203 93 7 20 185 13 207 1.14e-16 81.6
MsG0780036082.01.T01 AT4G22280 35.106 188 90 5 24 185 1 182 1.16e-16 81.3
MsG0780036082.01.T01 AT4G00160 33.514 185 94 5 25 183 16 197 1.19e-16 81.3
MsG0780036082.01.T01 AT2G42720 34.872 195 91 6 24 185 1 192 2.06e-16 80.5
MsG0780036082.01.T01 AT5G56820 33.333 186 94 6 25 187 15 193 5.55e-16 79.3
MsG0780036082.01.T01 AT5G25850 31.351 185 103 4 24 188 19 199 7.48e-16 79.0
MsG0780036082.01.T01 AT1G13780 32.683 205 90 9 19 183 4 200 1.02e-15 77.8
MsG0780036082.01.T01 AT1G13780 32.683 205 90 9 19 183 4 200 1.09e-15 78.6
MsG0780036082.01.T01 AT5G56440 31.557 244 126 8 24 233 1 237 1.11e-15 78.6
MsG0780036082.01.T01 AT1G16930 31.343 201 96 7 18 185 4 195 1.25e-15 78.2
MsG0780036082.01.T01 AT1G16930 31.343 201 96 7 18 185 4 195 1.25e-15 78.2
MsG0780036082.01.T01 AT1G16930 31.343 201 96 7 18 185 4 195 1.25e-15 78.2
MsG0780036082.01.T01 AT1G51370 28.774 212 123 5 23 213 17 221 1.38e-15 77.4
MsG0780036082.01.T01 AT1G51370 28.774 212 123 5 23 213 17 221 1.98e-15 77.4
MsG0780036082.01.T01 AT4G13965 29.114 237 127 7 25 231 10 235 2.05e-15 77.4
MsG0780036082.01.T01 AT1G51370 28.774 212 123 5 23 213 17 221 2.31e-15 77.4
MsG0780036082.01.T01 AT3G59230 30.769 221 110 9 25 206 12 228 5.34e-15 76.6
MsG0780036082.01.T01 AT4G00315 31.383 188 99 3 24 183 1 186 1.04e-14 75.5
MsG0780036082.01.T01 AT5G22660 31.771 192 107 4 13 183 1 189 1.18e-14 74.3
MsG0780036082.01.T01 AT3G59210 29.384 211 119 5 25 206 7 216 1.19e-14 75.5
MsG0780036082.01.T01 AT3G59210 29.384 211 119 5 25 206 7 216 1.19e-14 75.5
MsG0780036082.01.T01 AT3G59210 29.384 211 119 5 25 206 7 216 1.19e-14 75.5
MsG0780036082.01.T01 AT3G59210 29.384 211 119 5 25 206 7 216 1.19e-14 75.5
MsG0780036082.01.T01 AT3G59210 29.384 211 119 5 25 206 7 216 1.19e-14 75.5
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 43 225 1.43e-14 75.1
MsG0780036082.01.T01 AT4G00320 32.258 217 106 6 13 190 1 215 1.75e-14 75.1
MsG0780036082.01.T01 AT2G26030 31.551 187 97 7 25 185 4 185 1.86e-14 74.7
MsG0780036082.01.T01 AT2G26030 31.551 187 97 7 25 185 4 185 1.86e-14 74.7
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 43 225 1.89e-14 74.7
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 6 188 1.92e-14 74.7
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 6 188 1.92e-14 74.7
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 6 188 1.92e-14 74.7
MsG0780036082.01.T01 AT5G22700 30.688 189 101 4 25 189 6 188 1.92e-14 74.7
MsG0780036082.01.T01 AT2G26030 31.551 187 97 7 25 185 4 185 1.96e-14 74.7
MsG0780036082.01.T01 AT5G22660 31.771 192 107 4 13 183 1 189 2.33e-14 74.3
MsG0780036082.01.T01 AT5G41840 31.739 230 106 9 25 207 14 239 2.96e-14 74.3
MsG0780036082.01.T01 AT1G58310 29.434 265 121 8 25 238 8 257 3.11e-14 74.3
MsG0780036082.01.T01 AT3G56780 31.111 180 100 3 27 185 9 185 4.09e-14 73.6
MsG0780036082.01.T01 AT3G58960 30.392 204 106 8 24 197 1 198 4.13e-14 73.9
MsG0780036082.01.T01 AT5G56560 27.986 293 162 11 26 292 6 275 5.79e-14 73.6
MsG0780036082.01.T01 AT3G56780 31.111 180 100 3 27 185 9 185 7.01e-14 72.8
MsG0780036082.01.T01 AT3G56780 31.667 180 99 3 27 185 9 185 7.04e-14 73.2
MsG0780036082.01.T01 AT4G26350 32.973 185 99 4 24 185 1 183 1.13e-13 72.4
MsG0780036082.01.T01 AT4G15060 30.729 192 102 6 20 183 167 355 1.28e-13 72.4
MsG0780036082.01.T01 AT3G51530 24.408 422 217 16 25 358 30 437 1.29e-13 72.4
MsG0780036082.01.T01 AT5G38390 33.679 193 99 8 24 194 1 186 1.36e-13 72.0
MsG0780036082.01.T01 AT5G18780 31.868 182 100 5 25 185 11 189 1.50e-13 71.6
MsG0780036082.01.T01 AT5G18780 31.868 182 100 5 25 185 11 189 1.50e-13 71.6
MsG0780036082.01.T01 AT5G41830 29.870 231 121 6 13 204 1 229 1.54e-13 72.0
MsG0780036082.01.T01 AT5G18780 31.868 182 100 5 25 185 11 189 1.56e-13 72.0
MsG0780036082.01.T01 AT5G18780 31.868 182 100 5 25 185 11 189 1.56e-13 72.0
MsG0780036082.01.T01 AT4G15060 30.688 189 100 6 23 183 24 209 1.91e-13 71.6
MsG0780036082.01.T01 AT1G48400 34.010 197 93 6 21 185 6 197 2.00e-13 71.6
MsG0780036082.01.T01 AT1G48400 34.010 197 93 6 21 185 6 197 2.77e-13 71.2
MsG0780036082.01.T01 AT1G78760 27.660 188 105 4 22 183 13 195 2.98e-13 71.2
MsG0780036082.01.T01 AT3G03040 32.161 199 92 6 24 185 1 193 3.15e-13 71.2
MsG0780036082.01.T01 AT3G26922 30.270 185 103 5 25 186 14 195 3.30e-13 70.1
MsG0780036082.01.T01 AT3G26922 30.270 185 103 5 25 186 14 195 3.30e-13 70.1
MsG0780036082.01.T01 AT5G56560 32.474 194 98 8 26 195 6 190 3.62e-13 70.9
MsG0780036082.01.T01 AT5G27750 28.426 197 99 5 25 185 5 195 6.20e-13 69.7
MsG0780036082.01.T01 AT3G58900 31.522 276 128 13 24 254 1 260 6.53e-13 69.3
MsG0780036082.01.T01 AT5G27750 28.426 197 99 5 25 185 5 195 6.92e-13 70.1
MsG0780036082.01.T01 AT3G58900 31.522 276 128 13 24 254 1 260 7.75e-13 69.3
MsG0780036082.01.T01 AT3G58900 31.522 276 128 13 24 254 1 260 7.75e-13 69.3
MsG0780036082.01.T01 AT4G13960 33.146 178 96 7 24 188 1 168 9.95e-13 69.7
MsG0780036082.01.T01 AT4G13960 33.146 178 96 7 24 188 1 168 9.95e-13 69.7
MsG0780036082.01.T01 AT3G59240 30.332 211 117 6 25 206 8 217 1.33e-12 69.3
MsG0780036082.01.T01 AT3G58900 31.522 276 128 13 24 254 1 260 1.50e-12 68.9
MsG0780036082.01.T01 AT5G44490 29.302 215 120 5 20 206 12 222 1.72e-12 68.9
MsG0780036082.01.T01 AT1G78730 29.586 169 110 4 22 185 19 183 1.80e-12 68.6
MsG0780036082.01.T01 AT5G44490 29.302 215 120 5 20 206 12 222 1.86e-12 68.6
MsG0780036082.01.T01 AT1G52650 30.415 217 108 8 24 204 1 210 2.23e-12 68.6
MsG0780036082.01.T01 AT3G44810 32.512 203 94 8 20 185 2 198 2.84e-12 68.2
MsG0780036082.01.T01 AT1G32375 28.968 252 126 10 24 235 1 239 4.52e-12 67.4
MsG0780036082.01.T01 AT1G32375 28.968 252 126 10 24 235 1 239 4.52e-12 67.4
MsG0780036082.01.T01 AT3G49040 30.729 192 90 7 25 183 17 198 4.73e-12 66.6
MsG0780036082.01.T01 AT3G58920 30.045 223 108 8 24 203 1 218 4.93e-12 67.4
MsG0780036082.01.T01 AT3G59190 28.384 229 123 8 21 215 8 229 5.03e-12 67.0
MsG0780036082.01.T01 AT5G52460 30.435 276 155 11 18 278 10 263 5.23e-12 67.0
MsG0780036082.01.T01 AT1G66320 27.273 209 118 7 4 184 6 208 5.54e-12 67.4
MsG0780036082.01.T01 AT1G66310 28.796 191 109 5 18 185 12 198 6.19e-12 67.0
MsG0780036082.01.T01 AT5G56400 31.746 189 94 6 23 183 31 212 6.79e-12 67.0
MsG0780036082.01.T01 AT1G26890 30.409 171 91 5 13 160 24 189 6.82e-12 66.2
MsG0780036082.01.T01 AT1G26890 30.409 171 91 5 13 160 24 189 6.82e-12 66.2
MsG0780036082.01.T01 AT1G66290 28.436 211 113 7 4 185 4 205 8.31e-12 66.6
MsG0780036082.01.T01 AT3G49030 31.053 190 97 6 25 186 21 204 8.39e-12 66.6
MsG0780036082.01.T01 AT1G66300 26.087 207 123 5 5 185 6 208 8.83e-12 66.6
MsG0780036082.01.T01 AT1G60410 29.167 192 106 5 19 183 4 192 1.09e-11 66.2
MsG0780036082.01.T01 AT1G26890 30.409 171 91 5 13 160 24 189 1.25e-11 65.9
MsG0780036082.01.T01 AT1G26890 30.409 171 91 5 13 160 24 189 1.25e-11 65.9
MsG0780036082.01.T01 AT3G49020 32.796 186 94 7 23 183 20 199 1.31e-11 66.2
MsG0780036082.01.T01 AT3G59250 29.016 193 108 6 25 206 7 181 1.32e-11 65.9
MsG0780036082.01.T01 AT2G04230 30.303 198 107 6 18 186 6 201 1.33e-11 66.2
MsG0780036082.01.T01 AT1G19070 45.070 71 30 2 24 88 1 68 1.39e-11 60.5
MsG0780036082.01.T01 AT3G49030 31.053 190 97 6 25 186 21 204 1.43e-11 65.9
MsG0780036082.01.T01 AT1G26890 30.409 171 91 5 13 160 24 189 1.45e-11 65.9
MsG0780036082.01.T01 AT3G59190 28.384 229 123 8 21 215 8 229 1.70e-11 65.9
MsG0780036082.01.T01 AT3G03030 29.851 201 95 6 24 185 1 194 2.00e-11 65.1
MsG0780036082.01.T01 AT3G59000 46.053 76 30 1 24 88 1 76 2.06e-11 65.1
MsG0780036082.01.T01 AT3G58940 28.780 205 97 9 24 185 1 199 2.10e-11 65.9
MsG0780036082.01.T01 AT3G58940 28.780 205 97 9 24 185 1 199 2.10e-11 65.9
MsG0780036082.01.T01 AT3G59000 30.857 175 86 4 24 164 1 174 2.18e-11 65.5
MsG0780036082.01.T01 AT3G42770 30.802 237 100 11 27 217 1 219 2.79e-11 65.1
MsG0780036082.01.T01 AT1G22000 29.902 204 112 5 8 186 9 206 2.82e-11 65.1
MsG0780036082.01.T01 AT3G03030 29.851 201 95 6 24 185 1 194 5.32e-11 64.3
MsG0780036082.01.T01 AT5G38386 40.217 92 41 2 24 104 1 89 6.97e-11 63.5
MsG0780036082.01.T01 AT5G38386 40.217 92 41 2 24 104 1 89 6.97e-11 63.5
MsG0780036082.01.T01 AT3G14710 30.055 183 102 6 25 184 26 205 7.09e-11 63.9

Find 73 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTCCTTTGAATTTC+TGG 0.064587 7:+2215628 None:intergenic
TTAACATACACATGCATTTA+TGG 0.111657 7:-2217464 MsG0780036082.01.T01:intron
TTTGAGTGAGGGTAATATTA+TGG 0.147248 7:+2217965 None:intergenic
TAAGCTCAGTTATCTTTATA+TGG 0.167302 7:-2218009 MsG0780036082.01.T01:CDS
TGGGTATGCTGCTCACTTCT+TGG 0.209834 7:+2215648 None:intergenic
GACATTAAGTTTGATCAATA+TGG 0.224778 7:-2217927 MsG0780036082.01.T01:CDS
ATCTCCGCCGTTGAAGTTTC+TGG 0.259926 7:+2218359 None:intergenic
GAGAAGAGAGAATGTGAATT+AGG 0.265448 7:+2218306 None:intergenic
GTTTCGGTAAAGTTAATATC+TGG 0.284124 7:+2218215 None:intergenic
TCAAACTCTTGACCTTTATC+AGG 0.293685 7:-2217516 MsG0780036082.01.T01:CDS
TTCTACACATAGAACCATTC+AGG 0.304863 7:-2217725 MsG0780036082.01.T01:CDS
ATTCAATAATTTGACTCATT+TGG 0.307731 7:-2217594 MsG0780036082.01.T01:CDS
CAAAGAGATGGAAGCATCTA+TGG 0.330199 7:-2218247 MsG0780036082.01.T01:CDS
CTTCCATCTCTTTGAAAGAA+TGG 0.335449 7:+2218256 None:intergenic
TGCTCTATTCAACTTTGTTA+AGG 0.351980 7:+2217803 None:intergenic
TTGAGTGAGGGTAATATTAT+GGG 0.358347 7:+2217966 None:intergenic
ACTTAATGTCTTTCAAATGT+AGG 0.371939 7:+2217940 None:intergenic
AGGTCAAGAGTTTGAAGCTT+GGG 0.375430 7:+2217524 None:intergenic
AAGCTCAGTTATCTTTATAT+GGG 0.385070 7:-2218008 MsG0780036082.01.T01:CDS
TAAATCTGAGTCTTCGGTTT+CGG 0.387466 7:+2218199 None:intergenic
TCAACTTCCTTTGAATTTCT+GGG 0.396447 7:+2215629 None:intergenic
GGAAGTGAGAAAGGCTTGTT+TGG 0.396517 7:+2218277 None:intergenic
CAGTTATCTTTATATGGGTC+TGG 0.405920 7:-2218003 MsG0780036082.01.T01:CDS
TTGAATACAAGAGGTATAAA+CGG 0.406914 7:-2218091 MsG0780036082.01.T01:CDS
CTTCCATTCTTTCAAAGAGA+TGG 0.410263 7:-2218259 MsG0780036082.01.T01:CDS
TGAATACAAGAGGTATAAAC+GGG 0.410906 7:-2218090 MsG0780036082.01.T01:CDS
TAAGGTTTCGTAGGGTGCTT+TGG 0.411270 7:+2217821 None:intergenic
CTTAATGTCTTTCAAATGTA+GGG 0.413224 7:+2217941 None:intergenic
TGAAAGAATGGAAGTGAGAA+AGG 0.427103 7:+2218268 None:intergenic
GAGTTTGAAGCTTGGGGCAA+TGG 0.438174 7:+2217531 None:intergenic
TTAAGAAACAAACCTGATAA+AGG 0.439287 7:+2217504 None:intergenic
TCCATCTTGTGCACGCGAAA+AGG 0.442161 7:-2218152 MsG0780036082.01.T01:CDS
AGAAACTTCAACGGCGGAGA+TGG 0.444893 7:-2218357 MsG0780036082.01.T01:CDS
AGTTGAAGATCTTCAAGAAC+TGG 0.448679 7:+2217876 None:intergenic
GGAGCAGTTGTAGATCTATA+CGG 0.455096 7:+2217555 None:intergenic
GTGAGAAAGGCTTGTTTGGT+GGG 0.465858 7:+2218281 None:intergenic
TAAGTGTAAATCTGAGTCTT+CGG 0.474692 7:+2218193 None:intergenic
TGAGTCAAATTATTGAATGT+AGG 0.480068 7:+2217599 None:intergenic
CAACTTTGTTAAGGTTTCGT+AGG 0.481755 7:+2217812 None:intergenic
GAATTGCGTACGCATTCTAA+AGG 0.484733 7:+2215813 None:intergenic
GAGTCAAATTATTGAATGTA+GGG 0.484959 7:+2217600 None:intergenic
AACTTTGTTAAGGTTTCGTA+GGG 0.488770 7:+2217813 None:intergenic
ATTGAATGTAGGGAAGTCCT+TGG 0.492431 7:+2217610 None:intergenic
CTTCAACGGCGGAGATGGAT+AGG 0.500442 7:-2218352 MsG0780036082.01.T01:CDS
TGAAATTGTGATTTCGATTG+CGG 0.503498 7:-2215905 MsG0780036082.01.T01:CDS
TTGAATGTAGGGAAGTCCTT+GGG 0.522727 7:+2217611 None:intergenic
TTGTGCACGCGAAAAGGTGC+TGG 0.528312 7:-2218146 MsG0780036082.01.T01:CDS
TTTGAAGCTTGGGGCAATGG+TGG 0.532688 7:+2217534 None:intergenic
TCCTAGACGTTGAATACAAG+AGG 0.542446 7:-2218100 MsG0780036082.01.T01:CDS
AGTGAGAAAGGCTTGTTTGG+TGG 0.543183 7:+2218280 None:intergenic
CTAGACATTTCTGTCACGGC+AGG 0.546431 7:+2218386 None:intergenic
ATGTGAATTAGGATATCGTC+TGG 0.546750 7:+2218317 None:intergenic
AATGTAGGTTTATCTGCCCA+AGG 0.547452 7:-2217627 MsG0780036082.01.T01:intron
GTCTAGGATAAAACTGTGGA+TGG 0.548208 7:+2218115 None:intergenic
ATATTGATATATACCCTGAA+TGG 0.550724 7:+2217711 None:intergenic
ATATACTGCACAGAAAATCA+TGG 0.551154 7:-2215931 MsG0780036082.01.T01:intron
GATATTATTGATTGTGATTG+CGG 0.570803 7:-2217780 MsG0780036082.01.T01:CDS
TCTACACATAGAACCATTCA+GGG 0.572373 7:-2217724 MsG0780036082.01.T01:intron
CAGCATACCCAGAAATTCAA+AGG 0.577797 7:-2215636 MsG0780036082.01.T01:CDS
AAGGTCAAGAGTTTGAAGCT+TGG 0.581524 7:+2217523 None:intergenic
AACTGAGCTTAAGAACAACT+AGG 0.584124 7:+2218021 None:intergenic
ACCTCTTGTATTCAACGTCT+AGG 0.588950 7:+2218099 None:intergenic
GGTCAAGAGTTTGAAGCTTG+GGG 0.592283 7:+2217525 None:intergenic
ACTTTCTCTTTGATGTAGAG+CGG 0.599748 7:-2215680 MsG0780036082.01.T01:CDS
ACTGAGCTTAAGAACAACTA+GGG 0.601008 7:+2218022 None:intergenic
TCCGCCGTTGAAGTTTCTGG+CGG 0.624965 7:+2218362 None:intergenic
CGGACTAGACATTTCTGTCA+CGG 0.637685 7:+2218382 None:intergenic
TCCGCCAGAAACTTCAACGG+CGG 0.647049 7:-2218363 MsG0780036082.01.T01:CDS
TAGACATTTCTGTCACGGCA+GGG 0.658562 7:+2218387 None:intergenic
TAGTCCGCCAGAAACTTCAA+CGG 0.676700 7:-2218366 MsG0780036082.01.T01:CDS
ACATTTCTGTCACGGCAGGG+CGG 0.740456 7:+2218390 None:intergenic
CAACGTCTAGGATAAAACTG+TGG 0.753425 7:+2218111 None:intergenic
GAATACAAGAGGTATAAACG+GGG 0.780231 7:-2218089 MsG0780036082.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATTATAATTTTTTTCA+AGG + Chr7:2217676-2217695 None:intergenic 10.0%
!!! TAATGCTTTTTTTTTTTTTT+GGG - Chr7:2217788-2217807 MsG0780036082.01.T01:CDS 10.0%
!! AAGTAAACTTTCAATTTATT+CGG - Chr7:2216908-2216927 MsG0780036082.01.T01:intron 15.0%
!! TAATAATAACAATGAGTTAA+GGG + Chr7:2217525-2217544 None:intergenic 15.0%
!! TTAATAATAACAATGAGTTA+AGG + Chr7:2217526-2217545 None:intergenic 15.0%
!!! AAAAAAAAAAGCATTAGTTA+TGG + Chr7:2217784-2217803 None:intergenic 15.0%
!!! CTAATGCTTTTTTTTTTTTT+TGG - Chr7:2217787-2217806 MsG0780036082.01.T01:CDS 15.0%
!!! TTAACAATATTCATTTTCAA+TGG + Chr7:2216361-2216380 None:intergenic 15.0%
!! AAAACTGAAAGTTGTTAATA+TGG + Chr7:2217847-2217866 None:intergenic 20.0%
!! AAATTTCATGATATCTAACA+AGG + Chr7:2218058-2218077 None:intergenic 20.0%
!! AACAATATACTTCTAGATTA+AGG - Chr7:2217423-2217442 MsG0780036082.01.T01:intron 20.0%
!! AATAAAGAACATGTTGAAAA+AGG - Chr7:2217556-2217575 MsG0780036082.01.T01:CDS 20.0%
!! ATTCAATAATTTGACTCATT+TGG - Chr7:2216442-2216461 MsG0780036082.01.T01:intron 20.0%
!! TATTATTAACAGAAGATACA+AGG - Chr7:2216609-2216628 MsG0780036082.01.T01:intron 20.0%
!!! AATCTAGAAGTATATTGTTA+GGG + Chr7:2217422-2217441 None:intergenic 20.0%
!!! GAATATTTTTTTCAATGTCT+TGG + Chr7:2217053-2217072 None:intergenic 20.0%
!!! TAATCATGGGTTTTAAATAT+AGG - Chr7:2218282-2218301 MsG0780036082.01.T01:CDS 20.0%
!!! TAATCTAGAAGTATATTGTT+AGG + Chr7:2217423-2217442 None:intergenic 20.0%
!!! TGAAACTGTCTAAAATTAAA+AGG - Chr7:2216853-2216872 MsG0780036082.01.T01:intron 20.0%
!!! TTTCATTGATTCTCATAATA+AGG - Chr7:2217326-2217345 MsG0780036082.01.T01:intron 20.0%
!!! TTTTATATTGTGGCAAAATT+TGG - Chr7:2218167-2218186 MsG0780036082.01.T01:CDS 20.0%
! AAAAGAAGCTGTAAATAACA+AGG + Chr7:2218314-2218333 None:intergenic 25.0%
! AAGCTCAGTTATCTTTATAT+GGG - Chr7:2216028-2216047 MsG0780036082.01.T01:intron 25.0%
! ACTTAATGTCTTTCAAATGT+AGG + Chr7:2216099-2216118 None:intergenic 25.0%
! AGAAACTAGAGATAAAAGAA+AGG - Chr7:2217289-2217308 MsG0780036082.01.T01:intron 25.0%
! ATATTGATATATACCCTGAA+TGG + Chr7:2216328-2216347 None:intergenic 25.0%
! CTTAATGTCTTTCAAATGTA+GGG + Chr7:2216098-2216117 None:intergenic 25.0%
! GACATTAAGTTTGATCAATA+TGG - Chr7:2216109-2216128 MsG0780036082.01.T01:intron 25.0%
! GAGTCAAATTATTGAATGTA+GGG + Chr7:2216439-2216458 None:intergenic 25.0%
! GGATAATATTGAGCATTTAA+GGG + Chr7:2217400-2217419 None:intergenic 25.0%
! TAAGCTCAGTTATCTTTATA+TGG - Chr7:2216027-2216046 MsG0780036082.01.T01:intron 25.0%
! TGAGTCAAATTATTGAATGT+AGG + Chr7:2216440-2216459 None:intergenic 25.0%
! TTAACATACACATGCATTTA+TGG - Chr7:2216572-2216591 MsG0780036082.01.T01:intron 25.0%
! TTAAGAAACAAACCTGATAA+AGG + Chr7:2216535-2216554 None:intergenic 25.0%
!! AAAGCATTAGTTATGGAAAA+TGG + Chr7:2217777-2217796 None:intergenic 25.0%
!! AATTTTAGACAGTTTCAACT+TGG + Chr7:2216850-2216869 None:intergenic 25.0%
!! ATCTAGAAGTATATTGTTAG+GGG + Chr7:2217421-2217440 None:intergenic 25.0%
!! CAATGCAAACTTTTATATTG+TGG - Chr7:2218157-2218176 MsG0780036082.01.T01:CDS 25.0%
!! GATATTATTGATTGTGATTG+CGG - Chr7:2216256-2216275 MsG0780036082.01.T01:intron 25.0%
!! TACATTTCTTATTTCTCAGT+TGG + Chr7:2217892-2217911 None:intergenic 25.0%
!! TTGAATACAAGAGGTATAAA+CGG - Chr7:2215945-2215964 MsG0780036082.01.T01:intron 25.0%
!! TTTTACTTGCATTATCTTTG+TGG - Chr7:2217087-2217106 MsG0780036082.01.T01:intron 25.0%
!!! TTTTAGAAACTATGTCAATC+TGG - Chr7:2216823-2216842 MsG0780036082.01.T01:intron 25.0%
AAATAAACATACTGGAGTAC+AGG + Chr7:2218014-2218033 None:intergenic 30.0%
AACTTTGTTAAGGTTTCGTA+GGG + Chr7:2216226-2216245 None:intergenic 30.0%
AAGAACATGTTGAAAAAGGT+AGG - Chr7:2217560-2217579 MsG0780036082.01.T01:CDS 30.0%
AAGTTGTAAGGCTTAATGAA+AGG + Chr7:2216722-2216741 None:intergenic 30.0%
ATATACTGCACAGAAAATCA+TGG - Chr7:2218105-2218124 MsG0780036082.01.T01:CDS 30.0%
CGGAACATATATGATTATGT+AGG - Chr7:2216928-2216947 MsG0780036082.01.T01:intron 30.0%
GCAATTATTCTCATGTTCAA+GGG - Chr7:2216875-2216894 MsG0780036082.01.T01:intron 30.0%
GGGATAATATTGAGCATTTA+AGG + Chr7:2217401-2217420 None:intergenic 30.0%
GTTTCGGTAAAGTTAATATC+TGG + Chr7:2215824-2215843 None:intergenic 30.0%
TAAGTGTAAATCTGAGTCTT+CGG + Chr7:2215846-2215865 None:intergenic 30.0%
TAGTTTCTCTCTCTAAATTC+TGG + Chr7:2217277-2217296 None:intergenic 30.0%
TCAACTTCCTTTGAATTTCT+GGG + Chr7:2218410-2218429 None:intergenic 30.0%
TGAAAACTTCGATCAAGAAT+AGG + Chr7:2216666-2216685 None:intergenic 30.0%
TGAAATTGTGATTTCGATTG+CGG - Chr7:2218131-2218150 MsG0780036082.01.T01:CDS 30.0%
TGCTCTATTCAACTTTGTTA+AGG + Chr7:2216236-2216255 None:intergenic 30.0%
TTAAGCAAGCAGACTATATA+TGG - Chr7:2217939-2217958 MsG0780036082.01.T01:CDS 30.0%
TTGAGTGAGGGTAATATTAT+GGG + Chr7:2216073-2216092 None:intergenic 30.0%
TTGCATTATCTTTGTGGATT+TGG - Chr7:2217093-2217112 MsG0780036082.01.T01:intron 30.0%
TTTGAGTGAGGGTAATATTA+TGG + Chr7:2216074-2216093 None:intergenic 30.0%
! CTGATAGGATGTTTAGAATA+AGG + Chr7:2217497-2217516 None:intergenic 30.0%
! TGAATACAAGAGGTATAAAC+GGG - Chr7:2215946-2215965 MsG0780036082.01.T01:intron 30.0%
! TTGATCGAAGTTTTCATAAC+TGG - Chr7:2216670-2216689 MsG0780036082.01.T01:intron 30.0%
!! TACCAAGACATTTTTGGATT+CGG - Chr7:2217002-2217021 MsG0780036082.01.T01:intron 30.0%
!! TAGAATAAGGAGCACTAATA+TGG + Chr7:2217484-2217503 None:intergenic 30.0%
AAAGGGTAGTGTATACTAGT+AGG - Chr7:2217165-2217184 MsG0780036082.01.T01:intron 35.0%
AACTGAGCTTAAGAACAACT+AGG + Chr7:2216018-2216037 None:intergenic 35.0%
AAGATACAAGGCAGAATTTG+GGG - Chr7:2216621-2216640 MsG0780036082.01.T01:intron 35.0%
ACTGAGCTTAAGAACAACTA+GGG + Chr7:2216017-2216036 None:intergenic 35.0%
ACTTTCTCTTTGATGTAGAG+CGG - Chr7:2218356-2218375 MsG0780036082.01.T01:CDS 35.0%
AGAAGATACAAGGCAGAATT+TGG - Chr7:2216619-2216638 MsG0780036082.01.T01:intron 35.0%
AGTTGAAGATCTTCAAGAAC+TGG + Chr7:2216163-2216182 None:intergenic 35.0%
ATGTGAATTAGGATATCGTC+TGG + Chr7:2215722-2215741 None:intergenic 35.0%
ATTGTGCATGTTCAGATTAG+CGG - Chr7:2217588-2217607 MsG0780036082.01.T01:CDS 35.0%
CAACTTTGTTAAGGTTTCGT+AGG + Chr7:2216227-2216246 None:intergenic 35.0%
CAGTTATCTTTATATGGGTC+TGG - Chr7:2216033-2216052 MsG0780036082.01.T01:intron 35.0%
CTAATCTGAACATGCACAAT+TGG + Chr7:2217588-2217607 None:intergenic 35.0%
CTTCCATTCTTTCAAAGAGA+TGG - Chr7:2215777-2215796 MsG0780036082.01.T01:intron 35.0%
GAAGATACAAGGCAGAATTT+GGG - Chr7:2216620-2216639 MsG0780036082.01.T01:intron 35.0%
GAGAAGAGAGAATGTGAATT+AGG + Chr7:2215733-2215752 None:intergenic 35.0%
GATCGGCAAAATAAACATAC+TGG + Chr7:2218022-2218041 None:intergenic 35.0%
GGCAATTATTCTCATGTTCA+AGG - Chr7:2216874-2216893 MsG0780036082.01.T01:intron 35.0%
TAAATCTGAGTCTTCGGTTT+CGG + Chr7:2215840-2215859 None:intergenic 35.0%
TAACGATTGTGTCAGAGATA+TGG - Chr7:2217704-2217723 MsG0780036082.01.T01:intron 35.0%
TAGTGTATACTAGTAGGCAT+AGG - Chr7:2217171-2217190 MsG0780036082.01.T01:intron 35.0%
TCAAACTCTTGACCTTTATC+AGG - Chr7:2216520-2216539 MsG0780036082.01.T01:intron 35.0%
TCGAATTGGGTCATATCATT+TGG + Chr7:2217240-2217259 None:intergenic 35.0%
TCTACACATAGAACCATTCA+GGG - Chr7:2216312-2216331 MsG0780036082.01.T01:intron 35.0%
TGAAAGAATGGAAGTGAGAA+AGG + Chr7:2215771-2215790 None:intergenic 35.0%
TGCATTGTGCTTGTAATCAT+GGG - Chr7:2218269-2218288 MsG0780036082.01.T01:CDS 35.0%
TTCATGATATCTAACAAGGC+AGG + Chr7:2218054-2218073 None:intergenic 35.0%
TTCTACACATAGAACCATTC+AGG - Chr7:2216311-2216330 MsG0780036082.01.T01:intron 35.0%
TTGCATTGTGCTTGTAATCA+TGG - Chr7:2218268-2218287 MsG0780036082.01.T01:CDS 35.0%
! AAGAAGGAACAGATTTTGGA+AGG + Chr7:2216698-2216717 None:intergenic 35.0%
! CTTCCATCTCTTTGAAAGAA+TGG + Chr7:2215783-2215802 None:intergenic 35.0%
! GAATACAAGAGGTATAAACG+GGG - Chr7:2215947-2215966 MsG0780036082.01.T01:intron 35.0%
! TACAGCTTCTTTTGTGTTAC+TGG - Chr7:2218321-2218340 MsG0780036082.01.T01:CDS 35.0%
!! AGAAGGAACAGATTTTGGAA+GGG + Chr7:2216697-2216716 None:intergenic 35.0%
!! GGATTTTGATGTTTGTGCAA+CGG + Chr7:2218205-2218224 None:intergenic 35.0%
!!! AAATGTAGGGTTTTGAGTGA+GGG + Chr7:2216085-2216104 None:intergenic 35.0%
!!! ATGTTTATTTTGCCGATCCA+GGG - Chr7:2218024-2218043 MsG0780036082.01.T01:CDS 35.0%
!!! TATGTTTATTTTGCCGATCC+AGG - Chr7:2218023-2218042 MsG0780036082.01.T01:CDS 35.0%
!!! TGCAATAGACTTTTTCAGCA+TGG + Chr7:2218253-2218272 None:intergenic 35.0%
AAAGCTAACAACAGCTAGCT+AGG + Chr7:2217971-2217990 None:intergenic 40.0%
AAGGCCACTTAGTACATGTT+TGG + Chr7:2217657-2217676 None:intergenic 40.0%
AATGTAGGTTTATCTGCCCA+AGG - Chr7:2216409-2216428 MsG0780036082.01.T01:intron 40.0%
ACCTCTTGTATTCAACGTCT+AGG + Chr7:2215940-2215959 None:intergenic 40.0%
AGATACAAGGCAGAATTTGG+GGG - Chr7:2216622-2216641 MsG0780036082.01.T01:intron 40.0%
AGGCCACTTAGTACATGTTT+GGG + Chr7:2217656-2217675 None:intergenic 40.0%
AGGCTTAATGAAAGGCAAGA+AGG + Chr7:2216714-2216733 None:intergenic 40.0%
ATCTCTGACACAATCGTTAG+CGG + Chr7:2217703-2217722 None:intergenic 40.0%
ATTGAATGTAGGGAAGTCCT+TGG + Chr7:2216429-2216448 None:intergenic 40.0%
CAACCCAAACATGTACTAAG+TGG - Chr7:2217650-2217669 MsG0780036082.01.T01:intron 40.0%
CACCGAATCCAAAAATGTCT+TGG + Chr7:2217007-2217026 None:intergenic 40.0%
CACTAATATGGTAACTCAGC+TGG + Chr7:2217472-2217491 None:intergenic 40.0%
CACTTAGTACATGTTTGGGT+TGG + Chr7:2217652-2217671 None:intergenic 40.0%
CAGCATACCCAGAAATTCAA+AGG - Chr7:2218400-2218419 MsG0780036082.01.T01:CDS 40.0%
GAATTGCGTACGCATTCTAA+AGG + Chr7:2218226-2218245 None:intergenic 40.0%
GAGAACAACAAAGCATGACA+TGG + Chr7:2217733-2217752 None:intergenic 40.0%
GAGTTAAGGGTCTTTCTGAT+AGG + Chr7:2217512-2217531 None:intergenic 40.0%
GATATGACCCAATTCGAGTA+GGG - Chr7:2217243-2217262 MsG0780036082.01.T01:intron 40.0%
GGAGCAGTTGTAGATCTATA+CGG + Chr7:2216484-2216503 None:intergenic 40.0%
TCCTAGACGTTGAATACAAG+AGG - Chr7:2215936-2215955 MsG0780036082.01.T01:intron 40.0%
TGATATGACCCAATTCGAGT+AGG - Chr7:2217242-2217261 MsG0780036082.01.T01:intron 40.0%
TTGAATGTAGGGAAGTCCTT+GGG + Chr7:2216428-2216447 None:intergenic 40.0%
! AAGGTCAAGAGTTTGAAGCT+TGG + Chr7:2216516-2216535 None:intergenic 40.0%
! AGGCAAGAAGGAACAGATTT+TGG + Chr7:2216702-2216721 None:intergenic 40.0%
! AGGTCAAGAGTTTGAAGCTT+GGG + Chr7:2216515-2216534 None:intergenic 40.0%
! CAACGTCTAGGATAAAACTG+TGG + Chr7:2215928-2215947 None:intergenic 40.0%
! GTCTAGGATAAAACTGTGGA+TGG + Chr7:2215924-2215943 None:intergenic 40.0%
! GTCTGCTACCAAGACATTTT+TGG - Chr7:2216996-2217015 MsG0780036082.01.T01:intron 40.0%
!! CAAAGAGATGGAAGCATCTA+TGG - Chr7:2215789-2215808 MsG0780036082.01.T01:intron 40.0%
!! CAAGACATTTTTGGATTCGG+TGG - Chr7:2217005-2217024 MsG0780036082.01.T01:intron 40.0%
!! TTAGTACATGTTTGGGTTGG+TGG + Chr7:2217649-2217668 None:intergenic 40.0%
!!! AGCTAGCTGTTGTTAGCTTT+TGG - Chr7:2217971-2217990 MsG0780036082.01.T01:CDS 40.0%
!!! CAAATGTAGGGTTTTGAGTG+AGG + Chr7:2216086-2216105 None:intergenic 40.0%
!!! GCTAGCTGTTGTTAGCTTTT+GGG - Chr7:2217972-2217991 MsG0780036082.01.T01:CDS 40.0%
!!! TGCTTTGGAATTTTGACGAG+TGG + Chr7:2216203-2216222 None:intergenic 40.0%
AACAACAGCTAGCTAGGCAT+AGG + Chr7:2217965-2217984 None:intergenic 45.0%
ACTATGCGGGACTTTGGATT+TGG - Chr7:2216744-2216763 MsG0780036082.01.T01:intron 45.0%
CCTTACAACTTGCACTATGC+GGG - Chr7:2216731-2216750 MsG0780036082.01.T01:intron 45.0%
GCCTTACAACTTGCACTATG+CGG - Chr7:2216730-2216749 MsG0780036082.01.T01:intron 45.0%
GGCATAGGCAAATAAGCTTG+TGG - Chr7:2217186-2217205 MsG0780036082.01.T01:intron 45.0%
GTTCAGATTAGCGGTGAGTT+GGG - Chr7:2217597-2217616 MsG0780036082.01.T01:CDS 45.0%
TAGACATTTCTGTCACGGCA+GGG + Chr7:2215652-2215671 None:intergenic 45.0%
TAGTCCGCCAGAAACTTCAA+CGG - Chr7:2215670-2215689 MsG0780036082.01.T01:CDS 45.0%
TGTTCAGATTAGCGGTGAGT+TGG - Chr7:2217596-2217615 MsG0780036082.01.T01:CDS 45.0%
! AGTGAGAAAGGCTTGTTTGG+TGG + Chr7:2215759-2215778 None:intergenic 45.0%
! CGGACTAGACATTTCTGTCA+CGG + Chr7:2215657-2215676 None:intergenic 45.0%
! GGAAGTGAGAAAGGCTTGTT+TGG + Chr7:2215762-2215781 None:intergenic 45.0%
! GGTCAAGAGTTTGAAGCTTG+GGG + Chr7:2216514-2216533 None:intergenic 45.0%
! GTGAGAAAGGCTTGTTTGGT+GGG + Chr7:2215758-2215777 None:intergenic 45.0%
! TAAGGTTTCGTAGGGTGCTT+TGG + Chr7:2216218-2216237 None:intergenic 45.0%
!! GTAACTCAGCTGGTTCTAGA+AGG + Chr7:2217462-2217481 None:intergenic 45.0%
!! GTTTGGGTTGGTGGTGAATT+TGG + Chr7:2217640-2217659 None:intergenic 45.0%
!!! AGCTGTTGTTAGCTTTTGGG+CGG - Chr7:2217975-2217994 MsG0780036082.01.T01:CDS 45.0%
!!! AATAATCAATTAATTTTAAA+AGG - Chr7:2217147-2217166 MsG0780036082.01.T01:intron 5.0%
!!! ATAATCAATTAATTTTAAAA+GGG - Chr7:2217148-2217167 MsG0780036082.01.T01:intron 5.0%
!!! ATTTTTTTTTTTTTTAATGT+AGG - Chr7:2216394-2216413 MsG0780036082.01.T01:intron 5.0%
ACTTGCACTATGCGGGACTT+TGG - Chr7:2216738-2216757 MsG0780036082.01.T01:intron 50.0%
AGAAACTTCAACGGCGGAGA+TGG - Chr7:2215679-2215698 MsG0780036082.01.T01:CDS 50.0%
AGCGTGATCCCTACTCGAAT+TGG + Chr7:2217254-2217273 None:intergenic 50.0%
ATCTCCGCCGTTGAAGTTTC+TGG + Chr7:2215680-2215699 None:intergenic 50.0%
CCCGCATAGTGCAAGTTGTA+AGG + Chr7:2216734-2216753 None:intergenic 50.0%
CTAGACATTTCTGTCACGGC+AGG + Chr7:2215653-2215672 None:intergenic 50.0%
GCGTGATCCCTACTCGAATT+GGG + Chr7:2217253-2217272 None:intergenic 50.0%
TCCATCTTGTGCACGCGAAA+AGG - Chr7:2215884-2215903 MsG0780036082.01.T01:CDS 50.0%
TGGGTATGCTGCTCACTTCT+TGG + Chr7:2218391-2218410 None:intergenic 50.0%
! ACCTTTTCGCGTGCACAAGA+TGG + Chr7:2215888-2215907 None:intergenic 50.0%
! GAGTTTGAAGCTTGGGGCAA+TGG + Chr7:2216508-2216527 None:intergenic 50.0%
! TTTGAAGCTTGGGGCAATGG+TGG + Chr7:2216505-2216524 None:intergenic 50.0%
!!! GCTGTTGTTAGCTTTTGGGC+GGG - Chr7:2217976-2217995 MsG0780036082.01.T01:CDS 50.0%
ACATTTCTGTCACGGCAGGG+CGG + Chr7:2215649-2215668 None:intergenic 55.0%
CTTCAACGGCGGAGATGGAT+AGG - Chr7:2215684-2215703 MsG0780036082.01.T01:CDS 55.0%
TCCGCCAGAAACTTCAACGG+CGG - Chr7:2215673-2215692 MsG0780036082.01.T01:CDS 55.0%
! TCCGCCGTTGAAGTTTCTGG+CGG + Chr7:2215677-2215696 None:intergenic 55.0%
! TTGTGCACGCGAAAAGGTGC+TGG - Chr7:2215890-2215909 MsG0780036082.01.T01:CDS 55.0%
!!! GTTGTTAGCTTTTGGGCGGG+TGG - Chr7:2217979-2217998 MsG0780036082.01.T01:CDS 55.0%
AAGGCAGGCGTTCCCTGGAT+CGG + Chr7:2218039-2218058 None:intergenic 60.0%
CTAACAAGGCAGGCGTTCCC+TGG + Chr7:2218044-2218063 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 2215629 2218429 2215629 ID=MsG0780036082.01;Name=MsG0780036082.01
Chr7 mRNA 2215629 2218429 2215629 ID=MsG0780036082.01.T01;Parent=MsG0780036082.01;Name=MsG0780036082.01.T01;_AED=0.23;_eAED=0.27;_QI=0|0|0|0.75|0.33|0.25|4|0|367
Chr7 exon 2217725 2218429 2217725 ID=MsG0780036082.01.T01:exon:2316;Parent=MsG0780036082.01.T01
Chr7 exon 2217465 2217642 2217465 ID=MsG0780036082.01.T01:exon:2315;Parent=MsG0780036082.01.T01
Chr7 exon 2215824 2215940 2215824 ID=MsG0780036082.01.T01:exon:2314;Parent=MsG0780036082.01.T01
Chr7 exon 2215629 2215732 2215629 ID=MsG0780036082.01.T01:exon:2313;Parent=MsG0780036082.01.T01
Chr7 CDS 2217725 2218429 2217725 ID=MsG0780036082.01.T01:cds;Parent=MsG0780036082.01.T01
Chr7 CDS 2217465 2217642 2217465 ID=MsG0780036082.01.T01:cds;Parent=MsG0780036082.01.T01
Chr7 CDS 2215824 2215940 2215824 ID=MsG0780036082.01.T01:cds;Parent=MsG0780036082.01.T01
Chr7 CDS 2215629 2215732 2215629 ID=MsG0780036082.01.T01:cds;Parent=MsG0780036082.01.T01
Gene Sequence

>MsG0780036082.01.T01

TTGGCATGTGAAGAACACCGCCCTGCCGTGACAGAAATGTCTAGTCCGCCAGAAACTTCAACGGCGGAGATGGATAGGATAAGCAGTTTACCAGACGATATCCTAATTCACATTCTCTCTTCTCTTCCCACCAAACAAGCCTTTCTCACTTCCATTCTTTCAAAGAGATGGAAGCATCTATGGTGTTTTGTTCCAGATATTAACTTTACCGAAACCGAAGACTCAGATTTACACTTATTCTACAAATTTGTTGACTCCATCTTGTGCACGCGAAAAGGTGCTGGTAATCATTCCATCCACAGTTTTATCCTAGACGTTGAATACAAGAGGTATAAACGGGGAAGAATAACACGTAAATTGTCTAATACTATTCTTACTTGTACAACCCTAGTTGTTCTTAAGCTCAGTTATCTTTATATGGGTCTGGAGTTTTGCTATTATCCCATAATATTACCCTCACTCAAAACCCTACATTTGAAAGACATTAAGTTTGATCAATATGGAGATCTTAAGCGTCTTCTAGAGTATTGTCCAGTTCTTGAAGATCTTCAACTATATGTTATAATCTTTTCCACTCGTCAAAATTCCAAAGCACCCTACGAAACCTTAACAAAGTTGAATAGAGCAGATATTATTGATTGTGATTGCGGTGTTCTGATGAAAGCACTTTCAAATTTGATGTTTCTACACATAGAACCATTCAGGGTTTATCTGCCCAAGGACTTCCCTACATTCAATAATTTGACTCATTTGGTGATCAACTATCATTACCGTATAGATCTACAACTGCTCCACCATTGCCCCAAGCTTCAAACTCTTGACCTTTATCAGGTTTGTTTCTTAAATTTAACAATCATATTCTTAACATACACATGCATTTATGAAAATCATGGCTTTGAAATTGTGATTTCGATTGCGGTTACAATGCAAACTTTTATATTGTGGCAAAATTTGGAAATTGCGTTTGCCGTTGCACAAACATCAAAATCCTTTAGAATGCCTTCTTTTGTGTTACTGGTATTGTCGTCTAACTTTCTCTTTGATGTAGAGCGGCGAAGAAAACCAAGAAGTGAGCAGCATACCCAGAAATTCAAAGGAAGTTGA

Protein sequence

>MsG0780036082.01.T01

LACEEHRPAVTEMSSPPETSTAEMDRISSLPDDILIHILSSLPTKQAFLTSILSKRWKHLWCFVPDINFTETEDSDLHLFYKFVDSILCTRKGAGNHSIHSFILDVEYKRYKRGRITRKLSNTILTCTTLVVLKLSYLYMGLEFCYYPIILPSLKTLHLKDIKFDQYGDLKRLLEYCPVLEDLQLYVIIFSTRQNSKAPYETLTKLNRADIIDCDCGVLMKALSNLMFLHIEPFRVYLPKDFPTFNNLTHLVINYHYRIDLQLLHHCPKLQTLDLYQVCFLNLTIIFLTYTCIYENHGFEIVISIAVTMQTFILWQNLEIAFAVAQTSKSFRMPSFVLLVLSSNFLFDVERRRKPRSEQHTQKFKGS*