AlfalfaGEDB | MsG0780036093.01

M. sativa cultivar ZhongmuNo.1 / MsG0780036093.01

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036093.01.T01	KEH21552.1	85.657	251	33	2	1	248	1	251	1.13E-152	440

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036093.01.T01	Q9FGQ3	30.435	184	82	5	15	156	16	195	5.90E-13	71.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0280011351.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780037573.01	PPI
MsG0780036093.01	MsG0780041655.01	PPI
MsG0780036093.01	MsG0380017479.01	PPI
MsG0780036093.01	MsG0280007849.01	PPI
MsG0780036093.01	MsG0180006146.01	PPI
MsG0780036093.01	MsG0780037561.01	PPI
MsG0780036093.01	MsG0580024322.01	PPI
MsG0780037590.01	MsG0780036093.01	PPI
MsG0580029020.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0580024319.01	PPI
MsG0780036093.01	MsG0780037561.01	PPI
MsG0780036093.01	MsG0480022015.01	PPI
MsG0780036093.01	MsG0780037379.01	PPI
MsG0780036093.01	MsG0780038148.01	PPI
MsG0780037380.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0080049065.01	PPI
MsG0780038504.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780037561.01	PPI
MsG0780036093.01	MsG0780041655.01	PPI
MsG0780036093.01	MsG0780038468.01	PPI
MsG0280008689.01	MsG0780036093.01	PPI
MsG0780037872.01	MsG0780036093.01	PPI
MsG0580028638.01	MsG0780036093.01	PPI
MsG0780037584.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780037556.01	PPI
MsG0480022109.01	MsG0780036093.01	PPI
MsG0780037598.01	MsG0780036093.01	PPI
MsG0780037378.01	MsG0780036093.01	PPI
MsG0780038510.01	MsG0780036093.01	PPI
MsG0580029019.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0480022017.01	PPI
MsG0180005013.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780037546.01	PPI
MsG0780036093.01	MsG0780037381.01	PPI
MsG0780036093.01	MsG0780038501.01	PPI
MsG0780036093.01	MsG0280011360.01	PPI
MsG0380017513.01	MsG0780036093.01	PPI
MsG0280008687.01	MsG0780036093.01	PPI
MsG0780037551.01	MsG0780036093.01	PPI
MsG0780037542.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780041655.01	PPI
MsG0780036093.01	MsG0780037367.01	PPI
MsG0780037584.01	MsG0780036093.01	PPI
MsG0780038510.01	MsG0780036093.01	PPI
MsG0780038510.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0080048156.01	PPI
MsG0580028297.01	MsG0780036093.01	PPI
MsG0780037375.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0580024537.01	PPI
MsG0780036093.01	MsG0780038471.01	PPI
MsG0780037385.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780038469.01	PPI
MsG0780036093.01	MsG0280011356.01	PPI
MsG0780038502.01	MsG0780036093.01	PPI
MsG0780037584.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0780037584.01	PPI
MsG0780037574.01	MsG0780036093.01	PPI
MsG0780038497.01	MsG0780036093.01	PPI
MsG0780041655.01	MsG0780036093.01	PPI
MsG0580024321.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0180005012.01	PPI
MsG0780037561.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0280007849.01	PPI
MsG0780041629.01	MsG0780036093.01	PPI
MsG0380014181.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0580028652.01	PPI
MsG0780037547.01	MsG0780036093.01	PPI
MsG0780037181.01	MsG0780036093.01	PPI
MsG0780036093.01	MsG0380012970.01	PPI
MsG0780036093.01	MsG0780038508.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036093.01.T01	MTR_7g007370	85.657	251	33	2	1	248	1	251	1.36e-156	440
MsG0780036093.01.T01	MTR_7g007340	57.519	266	84	5	4	248	5	262	1.22e-87	266
MsG0780036093.01.T01	MTR_3g099830	49.286	280	105	5	1	248	1	275	1.24e-69	219
MsG0780036093.01.T01	MTR_2g007400	45.545	303	99	7	16	254	11	311	1.06e-63	205
MsG0780036093.01.T01	MTR_2g005990	42.617	298	109	5	12	248	1	297	3.47e-61	198
MsG0780036093.01.T01	MTR_2g007360	43.092	304	128	10	1	269	1	294	3.88e-59	192
MsG0780036093.01.T01	MTR_2g008320	41.472	299	115	8	5	248	44	337	3.34e-54	182
MsG0780036093.01.T01	MTR_2g008310	41.958	286	110	8	16	248	1	283	1.66e-52	176
MsG0780036093.01.T01	MTR_5g083890	37.574	338	132	7	12	270	1	338	7.70e-51	174
MsG0780036093.01.T01	MTR_1g107385	33.871	310	137	6	5	248	21	328	1.45e-45	158
MsG0780036093.01.T01	MTR_2g007090	44.269	253	88	7	1	248	1	205	4.84e-42	146
MsG0780036093.01.T01	MTR_2g007450	32.622	328	139	7	3	248	2	329	4.54e-38	139
MsG0780036093.01.T01	MTR_5g073420	37.102	283	116	9	16	244	10	284	1.44e-36	134
MsG0780036093.01.T01	MTR_3g107100	35.570	298	133	9	11	252	5	299	9.87e-36	132
MsG0780036093.01.T01	MTR_7g075820	44.706	170	87	4	89	252	140	308	9.71e-32	121
MsG0780036093.01.T01	MTR_7g075820	55.556	54	24	0	12	65	1	54	2.39e-11	63.9
MsG0780036093.01.T01	MTR_2g007500	34.694	294	131	10	9	248	6	292	2.01e-30	116
MsG0780036093.01.T01	MTR_7g056277	32.526	289	128	9	13	244	255	533	1.72e-28	114
MsG0780036093.01.T01	MTR_1g053025	33.022	321	141	10	16	269	1	314	3.02e-28	112
MsG0780036093.01.T01	MTR_7g056287	32.404	287	127	9	17	246	3	279	4.28e-28	111
MsG0780036093.01.T01	MTR_3g107160	32.765	293	137	9	13	248	6	295	2.21e-27	109
MsG0780036093.01.T01	MTR_1g041245	32.881	295	142	7	16	257	10	301	4.07e-27	108
MsG0780036093.01.T01	MTR_7g098570	33.445	299	141	9	1	244	2	297	4.83e-27	109
MsG0780036093.01.T01	MTR_7g007080	33.670	297	130	12	12	249	1	289	4.88e-27	108
MsG0780036093.01.T01	MTR_3g026920	31.646	316	140	10	16	255	18	333	3.64e-26	106
MsG0780036093.01.T01	MTR_6g040270	30.449	312	159	9	19	276	10	317	5.63e-26	105
MsG0780036093.01.T01	MTR_7g033470	55.000	120	33	6	1	106	1	113	7.14e-26	99.8
MsG0780036093.01.T01	MTR_1089s0010	31.690	284	132	8	14	242	5	281	1.62e-25	104
MsG0780036093.01.T01	MTR_1g108800	35.433	254	120	10	16	239	7	246	2.62e-25	103
MsG0780036093.01.T01	MTR_4g039440	33.101	287	130	10	16	244	33	315	4.52e-25	103
MsG0780036093.01.T01	MTR_3g108560	30.282	284	144	9	11	244	14	293	8.58e-25	101
MsG0780036093.01.T01	MTR_7g083740	29.431	299	172	5	1	273	1	286	1.17e-24	101
MsG0780036093.01.T01	MTR_3g108560	30.282	284	144	9	11	244	14	293	2.00e-24	101
MsG0780036093.01.T01	MTR_6g022360	31.387	274	140	9	16	244	42	312	2.57e-24	101
MsG0780036093.01.T01	MTR_7g055943	31.507	292	128	11	16	244	39	321	1.09e-23	99.8
MsG0780036093.01.T01	MTR_3g107120	30.675	326	150	11	9	265	1	319	1.50e-23	99.0
MsG0780036093.01.T01	MTR_7g026500	30.303	297	129	10	17	244	14	301	6.31e-23	97.4
MsG0780036093.01.T01	MTR_5g073340	33.798	287	141	11	11	256	2	280	7.58e-23	95.9
MsG0780036093.01.T01	MTR_7g056433	30.592	304	145	10	13	256	8	305	7.75e-23	97.1
MsG0780036093.01.T01	MTR_5g058000	32.270	282	131	9	16	244	7	281	9.37e-23	96.7
MsG0780036093.01.T01	MTR_7g098510	31.802	283	141	7	15	246	16	297	1.13e-22	96.7
MsG0780036093.01.T01	MTR_5g045170	30.464	302	142	10	2	244	4	296	1.59e-22	96.3
MsG0780036093.01.T01	MTR_7g098480	31.164	292	125	8	15	244	16	293	7.74e-22	94.7
MsG0780036093.01.T01	MTR_1g108820	29.836	305	139	11	16	253	7	303	2.82e-21	92.4
MsG0780036093.01.T01	MTR_6g029350	49.206	126	57	4	144	263	2	126	3.31e-21	90.1
MsG0780036093.01.T01	MTR_1g066830	31.379	290	131	11	16	242	7	291	4.18e-21	92.0
MsG0780036093.01.T01	MTR_5g073370	31.034	319	141	13	14	266	2	307	4.71e-21	92.0
MsG0780036093.01.T01	MTR_6g011460	30.986	284	137	10	16	244	45	324	5.08e-21	92.0
MsG0780036093.01.T01	MTR_1g108820	30.201	298	133	11	16	246	7	296	1.10e-20	90.5
MsG0780036093.01.T01	MTR_4g098590	32.166	314	133	11	22	261	4	311	2.18e-20	90.1
MsG0780036093.01.T01	MTR_7g075800	29.538	325	134	12	12	248	1	318	3.10e-20	90.5
MsG0780036093.01.T01	MTR_3g071850	37.572	173	83	7	93	246	148	314	7.67e-20	89.7
MsG0780036093.01.T01	MTR_5g008920	27.622	286	150	8	13	246	8	288	9.57e-20	88.2
MsG0780036093.01.T01	MTR_1g085120	31.000	300	139	13	17	253	92	386	2.33e-19	87.8
MsG0780036093.01.T01	MTR_1g085120	31.000	300	139	13	17	253	167	461	2.38e-19	87.8
MsG0780036093.01.T01	MTR_7g088260	31.228	285	131	11	17	244	91	367	2.64e-19	87.4
MsG0780036093.01.T01	MTR_0009s0080	29.430	316	143	12	1	246	1	306	1.14e-18	85.5
MsG0780036093.01.T01	MTR_1g085120	30.847	295	136	13	17	248	179	468	1.15e-18	85.5
MsG0780036093.01.T01	MTR_2g007550	30.100	299	128	9	1	255	1	262	1.16e-18	84.7
MsG0780036093.01.T01	MTR_5g008950	28.571	273	138	8	22	244	4	269	1.21e-18	85.1
MsG0780036093.01.T01	MTR_5g045510	31.418	261	123	9	16	224	11	267	2.40e-18	84.3
MsG0780036093.01.T01	MTR_5g058350	35.838	173	90	4	16	169	7	177	3.74e-18	80.5
MsG0780036093.01.T01	MTR_6g045333	37.791	172	84	8	93	246	185	351	7.11e-18	83.2
MsG0780036093.01.T01	MTR_7g032380	27.852	298	129	12	16	259	10	275	8.72e-18	82.4
MsG0780036093.01.T01	MTR_5g058100	35.758	165	87	7	94	244	131	290	1.28e-17	82.0
MsG0780036093.01.T01	MTR_5g007410	29.221	308	148	11	4	246	13	315	2.15e-17	82.0
MsG0780036093.01.T01	MTR_0492s0020	27.797	295	146	10	4	244	73	354	8.31e-17	80.1
MsG0780036093.01.T01	MTR_0543s0010	27.797	295	146	10	4	244	73	354	1.15e-16	79.7
MsG0780036093.01.T01	MTR_2g036470	30.851	282	135	10	24	246	21	301	2.35e-16	78.6
MsG0780036093.01.T01	MTR_3g108150	29.195	298	139	10	17	252	13	300	8.73e-16	77.0
MsG0780036093.01.T01	MTR_6g022500	28.720	289	144	10	16	246	100	384	5.33e-15	75.1
MsG0780036093.01.T01	MTR_7g056020	30.464	302	144	13	13	260	12	301	1.24e-14	73.9
MsG0780036093.01.T01	MTR_5g061680	35.897	156	71	6	94	244	135	266	1.94e-13	69.7
MsG0780036093.01.T01	MTR_7g034090	33.205	259	112	12	17	249	4	227	3.46e-13	69.3
MsG0780036093.01.T01	MTR_4g080610	27.206	272	167	8	12	257	7	273	5.82e-13	68.6
MsG0780036093.01.T01	MTR_5g084070	28.274	336	141	11	12	251	8	339	9.08e-13	68.2
MsG0780036093.01.T01	MTR_8g014180	50.943	53	26	0	1	53	1	53	8.85e-12	59.7
MsG0780036093.01.T01	MTR_4g024770	47.541	61	32	0	1	61	8	68	1.31e-11	59.7
MsG0780036093.01.T01	MTR_1g077420	41.758	91	43	2	17	97	4	94	1.45e-11	63.5
MsG0780036093.01.T01	MTR_7g034120	32.308	195	97	8	89	261	60	241	4.59e-11	62.8
MsG0780036093.01.T01	MTR_4g130200	30.120	166	93	4	17	164	20	180	4.76e-11	62.8
MsG0780036093.01.T01	MTR_1g095750	52.632	57	27	0	5	61	34	90	5.08e-11	60.1
MsG0780036093.01.T01	MTR_7g098590	59.184	49	20	0	13	61	14	62	6.35e-11	59.3
MsG0780036093.01.T01	MTR_5g080710	51.852	54	26	0	8	61	24	77	7.49e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780036093.01.T01	AT3G52680	30.693	202	92	5	1	157	6	204	6.49e-16	77.0
MsG0780036093.01.T01	AT3G52680	30.693	202	92	5	1	157	6	204	1.41e-15	76.6
MsG0780036093.01.T01	AT5G53840	30.435	184	82	5	15	156	16	195	6.01e-14	71.6
MsG0780036093.01.T01	AT3G26922	33.333	162	82	5	17	157	14	170	5.61e-12	65.1
MsG0780036093.01.T01	AT5G56430	31.250	160	86	2	19	178	4	139	6.44e-11	62.4
MsG0780036093.01.T01	AT2G04230	60.000	45	18	0	17	61	13	57	7.30e-11	62.4
MsG0780036093.01.T01	AT3G59250	33.962	159	82	6	17	156	7	161	8.16e-11	62.4

Find 60 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAGAGATGGAAGAATTTA+TGG	0.129058	7:-2385321	MsG0780036093.01.T01:CDS
GCCTTCACCGTTGAAGTTTC+TGG	0.132839	7:+2385448	None:intergenic
TTCTCCCGAAACAAGGTATT+TGG	0.204992	7:+2385255	None:intergenic
AAGATAGTATTAGGAAATTC+TGG	0.206492	7:+2385193	None:intergenic
GACATTGAGTTTCAACAATA+TGG	0.218981	7:-2385064	MsG0780036093.01.T01:CDS
TGGGTATGCTGCTCAGTTCT+TGG	0.235980	7:+2383900	None:intergenic
TCACTAGTAAAGATAGTATT+AGG	0.252859	7:+2385184	None:intergenic
GTAATCATTACATGGATAAT+TGG	0.265223	7:-2385225	MsG0780036093.01.T01:CDS
GTAACCAAATACCTTGTTTC+GGG	0.281231	7:-2385259	MsG0780036093.01.T01:CDS
TCAAACTCTTGACCTTTATC+AGG	0.293685	7:-2384658	MsG0780036093.01.T01:intron
AAGGTATTTGGTTACCGATT+TGG	0.304905	7:+2385267	None:intergenic
CTTCCATCTCTTTGAAAGAA+TGG	0.322981	7:+2385330	None:intergenic
ATTCAATAATTTGACCCATT+TGG	0.345786	7:-2384736	MsG0780036093.01.T01:CDS
AGGTCAAGAGTTTGAAGCTT+GGG	0.375430	7:+2384666	None:intergenic
GGTAACCAAATACCTTGTTT+CGG	0.396105	7:-2385260	MsG0780036093.01.T01:CDS
TAATCATTACATGGATAATT+GGG	0.413409	7:-2385224	MsG0780036093.01.T01:CDS
GGAAGTCACAAAGGCTTGAT+TGG	0.414727	7:+2385351	None:intergenic
CTCAATGTCTTTCAGATGTA+GGG	0.418649	7:+2385078	None:intergenic
ACTCAATGTCTTTCAGATGT+AGG	0.422872	7:+2385077	None:intergenic
CTATGGAGGAGGAGGTAGAT+AGG	0.429012	7:-2385426	MsG0780036093.01.T01:CDS
CTTCCATTCTTTCAAAGAGA+TGG	0.429124	7:-2385333	MsG0780036093.01.T01:CDS
CGAATTCGTCGGAACCAAAT+CGG	0.432737	7:-2385281	MsG0780036093.01.T01:CDS
CAAGGTTTCACAGCATGCCT+TGG	0.437303	7:+2384958	None:intergenic
GAGTTTGAAGCTTGGGGCAA+TGG	0.438174	7:+2384673	None:intergenic
TTAAGAAACAAACCTGATAA+AGG	0.439287	7:+2384646	None:intergenic
AGTTGAAGATCTTCAAGAAC+TGG	0.448679	7:+2385013	None:intergenic
GACGATAGTTGAGCACCAAA+TGG	0.453476	7:+2384721	None:intergenic
GAGAAGAGAGAATGTGAACT+AGG	0.453837	7:+2385380	None:intergenic
GGGTCAAATTATTGAATGTA+GGG	0.484959	7:+2384742	None:intergenic
TGGGTCAAATTATTGAATGT+AGG	0.488788	7:+2384741	None:intergenic
AGATAGTATTAGGAAATTCT+GGG	0.490626	7:+2385194	None:intergenic
AACTTCAACGGTGAAGGCTA+TGG	0.505115	7:-2385443	MsG0780036093.01.T01:CDS
TGTCACTCTTCTTTATTCCA+AGG	0.506719	7:-2384975	MsG0780036093.01.T01:CDS
ATGTGAACTAGGATATCATT+TGG	0.508108	7:+2385391	None:intergenic
GTCACAAAGGCTTGATTGGT+GGG	0.510125	7:+2385355	None:intergenic
TGCTCTATTCAACTTTGTCA+AGG	0.515376	7:+2384940	None:intergenic
GATGAAAGCACTTTCAAATG+TGG	0.527964	7:-2384888	MsG0780036093.01.T01:CDS
ACGATAGTTGAGCACCAAAT+GGG	0.529891	7:+2384722	None:intergenic
TTTGAAGCTTGGGGCAATGG+TGG	0.532688	7:+2384676	None:intergenic
GTTCCGACGAATTCGAGAGC+TGG	0.533412	7:+2385289	None:intergenic
GCCAGAAACTTCAACGGTGA+AGG	0.541308	7:-2385449	MsG0780036093.01.T01:CDS
GGAATAAAGAAGAGTGACAT+AGG	0.547358	7:+2384979	None:intergenic
AACGGTGAAGGCTATGGAGG+AGG	0.549192	7:-2385437	MsG0780036093.01.T01:CDS
AGTCACAAAGGCTTGATTGG+TGG	0.559712	7:+2385354	None:intergenic
GGTGAAGGCTATGGAGGAGG+AGG	0.577137	7:-2385434	MsG0780036093.01.T01:CDS
TCTACACATAAAACTATCCA+TGG	0.580390	7:-2384861	MsG0780036093.01.T01:intron
AAGGTCAAGAGTTTGAAGCT+TGG	0.581524	7:+2384665	None:intergenic
AGCTGTAGGTAATCATTACA+TGG	0.589897	7:-2385233	MsG0780036093.01.T01:CDS
GGTCAAGAGTTTGAAGCTTG+GGG	0.592283	7:+2384667	None:intergenic
CTTGTTTCGGGAGAAGCTGT+AGG	0.594186	7:-2385247	MsG0780036093.01.T01:CDS
ACTGAGCTTAAGAATAACAA+GGG	0.598793	7:+2385159	None:intergenic
TGAAAGAATGGAAGTCACAA+AGG	0.599495	7:+2385342	None:intergenic
CTACAGCTTCTCCCGAAACA+AGG	0.602241	7:+2385248	None:intergenic
TACTGAGCTTAAGAATAACA+AGG	0.608401	7:+2385158	None:intergenic
TTCAACGGTGAAGGCTATGG+AGG	0.617971	7:-2385440	MsG0780036093.01.T01:CDS
AGATCTTGATAGTCTTCTAG+AGG	0.622641	7:-2385041	MsG0780036093.01.T01:CDS
GTTCCAGCTCTCGAATTCGT+CGG	0.629571	7:-2385292	MsG0780036093.01.T01:CDS
GTCTCAGCCAGAAACTTCAA+CGG	0.654654	7:-2385455	MsG0780036093.01.T01:CDS
TTGGTGCTCAACTATCGTCA+CGG	0.660191	7:-2384717	MsG0780036093.01.T01:CDS
GATCTTGATAGTCTTCTAGA+GGG	0.669364	7:-2385040	MsG0780036093.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AACTGATTTTTTTTTAATAT+AGG	-	Chr7:2384523-2384542	MsG0780036093.01.T01:intron	10.0%
!!!	ACTGATTTTTTTTTAATATA+GGG	-	Chr7:2384524-2384543	MsG0780036093.01.T01:intron	10.0%
!!	ATTAATGAGTATTTCAATAT+AGG	-	Chr7:2385288-2385307	MsG0780036093.01.T01:CDS	15.0%
!!	AAAATTATTCTCAAGTTCAA+GGG	-	Chr7:2385003-2385022	MsG0780036093.01.T01:CDS	20.0%
!!	AATATAAAATTAGTGCCTAT+TGG	+	Chr7:2385235-2385254	None:intergenic	20.0%
!!	ATGTAAACTTTCAGTTTATT+CGG	-	Chr7:2385036-2385055	MsG0780036093.01.T01:CDS	20.0%
!!	TAATCATTACATGGATAATT+GGG	-	Chr7:2384083-2384102	MsG0780036093.01.T01:intron	20.0%
!!!	AAGCTCAGTAATATTTTTAT+GGG	-	Chr7:2384162-2384181	MsG0780036093.01.T01:intron	20.0%
!!!	ATAGGCACTAATTTTATATT+TGG	-	Chr7:2385235-2385254	MsG0780036093.01.T01:CDS	20.0%
!!!	TAAGCTCAGTAATATTTTTA+TGG	-	Chr7:2384161-2384180	MsG0780036093.01.T01:intron	20.0%
!	AAGATAGTATTAGGAAATTC+TGG	+	Chr7:2384117-2384136	None:intergenic	25.0%
!	AAGTTGTAAGGTTTAATACA+AGG	+	Chr7:2384850-2384869	None:intergenic	25.0%
!	AGATAGTATTAGGAAATTCT+GGG	+	Chr7:2384116-2384135	None:intergenic	25.0%
!	ATTCAATAATTTGACCCATT+TGG	-	Chr7:2384571-2384590	MsG0780036093.01.T01:intron	25.0%
!	CAAAATAAAACGATACATAG+AGG	+	Chr7:2384734-2384753	None:intergenic	25.0%
!	CAAATTTATGTTAAGCCAAT+AGG	-	Chr7:2385217-2385236	MsG0780036093.01.T01:CDS	25.0%
!	GAAAATTATTCTCAAGTTCA+AGG	-	Chr7:2385002-2385021	MsG0780036093.01.T01:CDS	25.0%
!	GTAATCATTACATGGATAAT+TGG	-	Chr7:2384082-2384101	MsG0780036093.01.T01:intron	25.0%
!	TCACTAGTAAAGATAGTATT+AGG	+	Chr7:2384126-2384145	None:intergenic	25.0%
!	TTAAGAAACAAACCTGATAA+AGG	+	Chr7:2384664-2384683	None:intergenic	25.0%
!	TTTCAATATAGGCACAATAT+AGG	-	Chr7:2385299-2385318	MsG0780036093.01.T01:CDS	25.0%
!!	AAGGAAGTTGAATCTTTTTA+TGG	-	Chr7:2385438-2385457	MsG0780036093.01.T01:CDS	25.0%
	AAATCCAACAATTTCATGGT+TGG	+	Chr7:2385122-2385141	None:intergenic	30.0%
	AACCAAATCCAACAATTTCA+TGG	+	Chr7:2385126-2385145	None:intergenic	30.0%
	AACCATGAAATTGTTGGATT+TGG	-	Chr7:2385121-2385140	MsG0780036093.01.T01:CDS	30.0%
	ACTGAGCTTAAGAATAACAA+GGG	+	Chr7:2384151-2384170	None:intergenic	30.0%
	ATGTGAACTAGGATATCATT+TGG	+	Chr7:2383919-2383938	None:intergenic	30.0%
	CAAAGAGATGGAAGAATTTA+TGG	-	Chr7:2383986-2384005	MsG0780036093.01.T01:intron	30.0%
	GACATTGAGTTTCAACAATA+TGG	-	Chr7:2384243-2384262	MsG0780036093.01.T01:intron	30.0%
	GGGTCAAATTATTGAATGTA+GGG	+	Chr7:2384568-2384587	None:intergenic	30.0%
	TACTGAGCTTAAGAATAACA+AGG	+	Chr7:2384152-2384171	None:intergenic	30.0%
	TATTATTAACAGAAGAACCG+AGG	-	Chr7:2384758-2384777	MsG0780036093.01.T01:CDS	30.0%
	TCATATGGTGATATATACCA+TGG	+	Chr7:2384466-2384485	None:intergenic	30.0%
	TCTACACATAAAACTATCCA+TGG	-	Chr7:2384446-2384465	MsG0780036093.01.T01:intron	30.0%
	TGGGTCAAATTATTGAATGT+AGG	+	Chr7:2384569-2384588	None:intergenic	30.0%
	TTTCAATAGCATGCATCATA+TGG	+	Chr7:2384481-2384500	None:intergenic	30.0%
!	CATAGAGGTATGTTAAGAAA+AGG	+	Chr7:2384719-2384738	None:intergenic	30.0%
!	TCAACTTCCTTCGTATTTTT+GGG	+	Chr7:2385429-2385448	None:intergenic	30.0%
!	TTCAACTTCCTTCGTATTTT+TGG	+	Chr7:2385430-2385449	None:intergenic	30.0%
!!	AGTAATATTTTTATGGGTGC+TGG	-	Chr7:2384168-2384187	MsG0780036093.01.T01:intron	30.0%
!!	GTAATATTTTTATGGGTGCT+GGG	-	Chr7:2384169-2384188	MsG0780036093.01.T01:intron	30.0%
!!	TTTTAGAAACTATGTCAGTC+GGG	-	Chr7:2384951-2384970	MsG0780036093.01.T01:CDS	30.0%
!!!	GTTTTAGAAACTATGTCAGT+CGG	-	Chr7:2384950-2384969	MsG0780036093.01.T01:CDS	30.0%
	AAGGTTTAATACAAGGCAAG+AGG	+	Chr7:2384843-2384862	None:intergenic	35.0%
	ACCTTACAACTTGCATTATG+CGG	-	Chr7:2384858-2384877	MsG0780036093.01.T01:intron	35.0%
	ACTCAATGTCTTTCAGATGT+AGG	+	Chr7:2384233-2384252	None:intergenic	35.0%
	AGCTGTAGGTAATCATTACA+TGG	-	Chr7:2384074-2384093	MsG0780036093.01.T01:intron	35.0%
	AGGTTTAATACAAGGCAAGA+GGG	+	Chr7:2384842-2384861	None:intergenic	35.0%
	AGTTGAAGATCTTCAAGAAC+TGG	+	Chr7:2384297-2384316	None:intergenic	35.0%
	CTCAATGTCTTTCAGATGTA+GGG	+	Chr7:2384232-2384251	None:intergenic	35.0%
	CTTCCATTCTTTCAAAGAGA+TGG	-	Chr7:2383974-2383993	MsG0780036093.01.T01:intron	35.0%
	GAAGTTATGGTCAAAAAGAC+TGG	-	Chr7:2384798-2384817	MsG0780036093.01.T01:intron	35.0%
	GAGGTATGTTAAGAAAAGGA+AGG	+	Chr7:2384715-2384734	None:intergenic	35.0%
	GGAATAAAGAAGAGTGACAT+AGG	+	Chr7:2384331-2384350	None:intergenic	35.0%
	TCAAACTCTTGACCTTTATC+AGG	-	Chr7:2384649-2384668	MsG0780036093.01.T01:intron	35.0%
	TGAAAGAATGGAAGTCACAA+AGG	+	Chr7:2383968-2383987	None:intergenic	35.0%
	TGAAAGTTTACATGTTGCAG+AGG	+	Chr7:2385029-2385048	None:intergenic	35.0%
	TGCTCTATTCAACTTTGTCA+AGG	+	Chr7:2384370-2384389	None:intergenic	35.0%
	TGTCACTCTTCTTTATTCCA+AGG	-	Chr7:2384332-2384351	MsG0780036093.01.T01:intron	35.0%
	TTGCTAACAAAATGTGCTCA+CGG	+	Chr7:2384907-2384926	None:intergenic	35.0%
!	AAGGTATTTGGTTACCGATT+TGG	+	Chr7:2384043-2384062	None:intergenic	35.0%
!	AGATCTTGATAGTCTTCTAG+AGG	-	Chr7:2384266-2384285	MsG0780036093.01.T01:intron	35.0%
!	CTTCCATCTCTTTGAAAGAA+TGG	+	Chr7:2383980-2383999	None:intergenic	35.0%
!	GATCTTGATAGTCTTCTAGA+GGG	-	Chr7:2384267-2384286	MsG0780036093.01.T01:intron	35.0%
!	GGTAACCAAATACCTTGTTT+CGG	-	Chr7:2384047-2384066	MsG0780036093.01.T01:intron	35.0%
!	GTAACCAAATACCTTGTTTC+GGG	-	Chr7:2384048-2384067	MsG0780036093.01.T01:intron	35.0%
!	GTTGAATCTTTTTATGGCAC+TGG	-	Chr7:2385444-2385463	MsG0780036093.01.T01:CDS	35.0%
!	TAATGATTAAAGTGCCTGCT+TGG	+	Chr7:2385272-2385291	None:intergenic	35.0%
!!	GATGAAAGCACTTTCAAATG+TGG	-	Chr7:2384419-2384438	MsG0780036093.01.T01:intron	35.0%
!!	TACACCTTTTGTTGTGTTAC+TGG	-	Chr7:2385338-2385357	MsG0780036093.01.T01:CDS	35.0%
!!	TTTTAAGTACTGTGTGCTGA+TGG	-	Chr7:2385147-2385166	MsG0780036093.01.T01:CDS	35.0%
	AACGCCAGTAACACAACAAA+AGG	+	Chr7:2385345-2385364	None:intergenic	40.0%
	ACGATAGTTGAGCACCAAAT+GGG	+	Chr7:2384588-2384607	None:intergenic	40.0%
	AGCTCCAACCATGAAATTGT+TGG	-	Chr7:2385115-2385134	MsG0780036093.01.T01:CDS	40.0%
	ATTAGGGAGGATCGAAGTTA+TGG	-	Chr7:2384785-2384804	MsG0780036093.01.T01:intron	40.0%
	CAGCATACCCAAAAATACGA+AGG	-	Chr7:2385419-2385438	MsG0780036093.01.T01:CDS	40.0%
	CCTTACAACTTGCATTATGC+GGG	-	Chr7:2384859-2384878	MsG0780036093.01.T01:intron	40.0%
	GAGAAGAGAGAATGTGAACT+AGG	+	Chr7:2383930-2383949	None:intergenic	40.0%
!	AAGAGGGAACAGATTTTGGA+AGG	+	Chr7:2384826-2384845	None:intergenic	40.0%
!	AAGGTCAAGAGTTTGAAGCT+TGG	+	Chr7:2384645-2384664	None:intergenic	40.0%
!	AGGTCAAGAGTTTGAAGCTT+GGG	+	Chr7:2384644-2384663	None:intergenic	40.0%
!	TTCTCCCGAAACAAGGTATT+TGG	+	Chr7:2384055-2384074	None:intergenic	40.0%
!!	AGAGGGAACAGATTTTGGAA+GGG	+	Chr7:2384825-2384844	None:intergenic	40.0%
!!	CTCAGTTCTTGGTTTTCTTC+GGG	+	Chr7:2385399-2385418	None:intergenic	40.0%
!!	GCTCAGTTCTTGGTTTTCTT+CGG	+	Chr7:2385400-2385419	None:intergenic	40.0%
!!	TCAGTTCTTGGTTTTCTTCG+GGG	+	Chr7:2385398-2385417	None:intergenic	40.0%
!!!	AGATGTAGGGTTTTGAGTGA+GGG	+	Chr7:2384219-2384238	None:intergenic	40.0%
	AACTTCAACGGTGAAGGCTA+TGG	-	Chr7:2383864-2383883	MsG0780036093.01.T01:CDS	45.0%
	AGTCACAAAGGCTTGATTGG+TGG	+	Chr7:2383956-2383975	None:intergenic	45.0%
	CCCGCATAATGCAAGTTGTA+AGG	+	Chr7:2384862-2384881	None:intergenic	45.0%
	CGAATTCGTCGGAACCAAAT+CGG	-	Chr7:2384026-2384045	MsG0780036093.01.T01:intron	45.0%
	GACGATAGTTGAGCACCAAA+TGG	+	Chr7:2384589-2384608	None:intergenic	45.0%
	GGAAGTCACAAAGGCTTGAT+TGG	+	Chr7:2383959-2383978	None:intergenic	45.0%
	GTCACAAAGGCTTGATTGGT+GGG	+	Chr7:2383955-2383974	None:intergenic	45.0%
	GTCTCAGCCAGAAACTTCAA+CGG	-	Chr7:2383852-2383871	MsG0780036093.01.T01:CDS	45.0%
	TGGATTACTAGACACCAAGC+AGG	-	Chr7:2385255-2385274	MsG0780036093.01.T01:CDS	45.0%
!	AGGCAAGAGGGAACAGATTT+TGG	+	Chr7:2384830-2384849	None:intergenic	45.0%
!	GGTCAAGAGTTTGAAGCTTG+GGG	+	Chr7:2384643-2384662	None:intergenic	45.0%
!	TTGGTGCTCAACTATCGTCA+CGG	-	Chr7:2384590-2384609	MsG0780036093.01.T01:intron	45.0%
!!	CAGTTCTTGGTTTTCTTCGG+GGG	+	Chr7:2385397-2385416	None:intergenic	45.0%
!!!	CAGATGTAGGGTTTTGAGTG+AGG	+	Chr7:2384220-2384239	None:intergenic	45.0%
	ACTTGCATTATGCGGGACGT+TGG	-	Chr7:2384866-2384885	MsG0780036093.01.T01:CDS	50.0%
	AGAAGAACCGAGGCAGCATT+AGG	-	Chr7:2384768-2384787	MsG0780036093.01.T01:intron	50.0%
	CAAGGTTTCACAGCATGCCT+TGG	+	Chr7:2384352-2384371	None:intergenic	50.0%
	CTACAGCTTCTCCCGAAACA+AGG	+	Chr7:2384062-2384081	None:intergenic	50.0%
	CTATGGAGGAGGAGGTAGAT+AGG	-	Chr7:2383881-2383900	MsG0780036093.01.T01:CDS	50.0%
	CTTGTTTCGGGAGAAGCTGT+AGG	-	Chr7:2384060-2384079	MsG0780036093.01.T01:intron	50.0%
	GAAGAACCGAGGCAGCATTA+GGG	-	Chr7:2384769-2384788	MsG0780036093.01.T01:intron	50.0%
	GCCAGAAACTTCAACGGTGA+AGG	-	Chr7:2383858-2383877	MsG0780036093.01.T01:CDS	50.0%
	GCCTTCACCGTTGAAGTTTC+TGG	+	Chr7:2383862-2383881	None:intergenic	50.0%
	GTTCCAGCTCTCGAATTCGT+CGG	-	Chr7:2384015-2384034	MsG0780036093.01.T01:intron	50.0%
	TGGGTATGCTGCTCAGTTCT+TGG	+	Chr7:2385410-2385429	None:intergenic	50.0%
	TTCAACGGTGAAGGCTATGG+AGG	-	Chr7:2383867-2383886	MsG0780036093.01.T01:CDS	50.0%
!	GAGTTTGAAGCTTGGGGCAA+TGG	+	Chr7:2384637-2384656	None:intergenic	50.0%
!	TTTGAAGCTTGGGGCAATGG+TGG	+	Chr7:2384634-2384653	None:intergenic	50.0%
	AACGGTGAAGGCTATGGAGG+AGG	-	Chr7:2383870-2383889	MsG0780036093.01.T01:CDS	55.0%
	GATCCTCCCTAATGCTGCCT+CGG	+	Chr7:2384778-2384797	None:intergenic	55.0%
	GTTCCGACGAATTCGAGAGC+TGG	+	Chr7:2384021-2384040	None:intergenic	55.0%
	GAACCGAGGCAGCATTAGGG+AGG	-	Chr7:2384772-2384791	MsG0780036093.01.T01:intron	60.0%
	GGTGAAGGCTATGGAGGAGG+AGG	-	Chr7:2383873-2383892	MsG0780036093.01.T01:CDS	60.0%
!	CTATGTCAGTCGGGTGCTGC+TGG	-	Chr7:2384960-2384979	MsG0780036093.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	2383850	2385479	2383850	ID=MsG0780036093.01;Name=MsG0780036093.01
Chr7	mRNA	2383850	2385479	2383850	ID=MsG0780036093.01.T01;Parent=MsG0780036093.01;Name=MsG0780036093.01.T01;_AED=0.21;_eAED=0.21;_QI=0\|0\|0\|1\|0.5\|0.66\|3\|0\|276
Chr7	exon	2384862	2385479	2384862	ID=MsG0780036093.01.T01:exon:15675;Parent=MsG0780036093.01.T01
Chr7	exon	2384659	2384784	2384659	ID=MsG0780036093.01.T01:exon:15674;Parent=MsG0780036093.01.T01
Chr7	exon	2383850	2383936	2383850	ID=MsG0780036093.01.T01:exon:15673;Parent=MsG0780036093.01.T01
Chr7	CDS	2384862	2385479	2384862	ID=MsG0780036093.01.T01:cds;Parent=MsG0780036093.01.T01
Chr7	CDS	2384659	2384784	2384659	ID=MsG0780036093.01.T01:cds;Parent=MsG0780036093.01.T01
Chr7	CDS	2383850	2383936	2383850	ID=MsG0780036093.01.T01:cds;Parent=MsG0780036093.01.T01

Gene Sequence

>MsG0780036093.01.T01

ATGTCTCAGCCAGAAACTTCAACGGTGAAGGCTATGGAGGAGGAGGTAGATAGGATCAGCATTTTACCAAATGATATCCTAGTTCACATTCTCTCTTCTCTTCCCACCAATCAAGCCTTTGTGACTTCCATTCTTTCAAAGAGATGGAAGAATTTATGGTGTCTCGTTCCAGCTCTCGAATTCGTCGGAACCAAATCGGTAACCAAATACCTTGTTTCGGGAGAAGCTGTAGGTAATCATTACATGGATAATTGGGAAAGATACCCAGAATTTCCTAATACTATCTTTACTAGTGAAACCCTTGTTATTCTTAAGCTCAGTAATATTTTTATGGGTGCTGGGTTTTGTAATTATCTCATAAGATTACCCTCACTCAAAACCCTACATCTGAAAGACATTGAGTTTCAACAATATGGAGATCTTGATAGTCTTCTAGAGGGATGTCCAGTTCTTGAAGATCTTCAACTATATGTTATATCCTATGTCACTCTTCTTTATTCCAAGGCATGCTGTGAAACCTTGACAAAGTTGAATAGAGCAGATATTATTCAATGTGAATGTTGTGTTCTGATGAAAGCACTTTCAAATGTGGAGTTTCTACACATAAAACTATCCATGGGTTATCTTTATTACGTCTTCCCTACATTCAATAATTTGACCCATTTGGTGCTCAACTATCGTCACGGTATAGATCTACAGATGCTCCACCATTGCCCCAAGCTTCAAACTCTTGACCTTTATCAGACCCCCGAAGAAAACCAAGAACTGAGCAGCATACCCAAAAATACGAAGGAAGTTGAATCTTTTTATGGCACTGGCATAACCCTGTAG

Protein sequence

>MsG0780036093.01.T01

MSQPETSTVKAMEEEVDRISILPNDILVHILSSLPTNQAFVTSILSKRWKNLWCLVPALEFVGTKSVTKYLVSGEAVGNHYMDNWERYPEFPNTIFTSETLVILKLSNIFMGAGFCNYLIRLPSLKTLHLKDIEFQQYGDLDSLLEGCPVLEDLQLYVISYVTLLYSKACCETLTKLNRADIIQCECCVLMKALSNVEFLHIKLSMGYLYYVFPTFNNLTHLVLNYRHGIDLQMLHHCPKLQTLDLYQTPEENQELSSIPKNTKEVESFYGTGITL*