AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037251.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037251.01.T01 MTR_3g099830 57.031 384 139 9 16 383 1 374 4.72e-133 386
MsG0780037251.01.T01 MTR_2g007400 50.490 408 155 10 16 382 1 402 2.25e-117 347
MsG0780037251.01.T01 MTR_7g007340 54.670 364 143 9 19 377 5 351 2.85e-114 338
MsG0780037251.01.T01 MTR_2g005990 47.870 399 164 7 24 383 2 395 1.64e-109 327
MsG0780037251.01.T01 MTR_2g007360 48.849 391 160 13 16 383 1 374 1.19e-100 303
MsG0780037251.01.T01 MTR_2g008320 44.975 398 169 11 20 382 44 426 9.04e-93 286
MsG0780037251.01.T01 MTR_2g008310 45.244 389 161 10 27 382 1 370 7.36e-90 276
MsG0780037251.01.T01 MTR_1g107385 42.365 406 170 13 28 383 32 423 1.05e-83 261
MsG0780037251.01.T01 MTR_7g007370 47.522 343 145 8 16 350 1 316 2.74e-81 253
MsG0780037251.01.T01 MTR_7g075820 41.133 406 180 14 24 383 2 394 2.78e-75 239
MsG0780037251.01.T01 MTR_5g083890 40.209 383 182 6 28 364 6 387 4.72e-73 236
MsG0780037251.01.T01 MTR_2g007450 38.353 425 187 14 21 383 9 420 1.87e-71 230
MsG0780037251.01.T01 MTR_2g007090 41.755 376 129 12 16 383 1 294 1.23e-68 219
MsG0780037251.01.T01 MTR_1g053025 36.408 412 184 14 27 383 1 389 7.91e-64 209
MsG0780037251.01.T01 MTR_6g029350 56.039 207 75 7 181 382 2 197 8.91e-64 204
MsG0780037251.01.T01 MTR_3g107100 37.653 409 179 16 28 382 11 397 1.94e-56 190
MsG0780037251.01.T01 MTR_3g107120 37.965 403 177 16 28 380 9 388 1.62e-53 182
MsG0780037251.01.T01 MTR_3g107160 35.768 397 197 15 28 386 10 386 2.91e-52 179
MsG0780037251.01.T01 MTR_7g083740 36.203 395 207 14 13 387 2 371 9.39e-52 177
MsG0780037251.01.T01 MTR_5g073420 34.925 398 203 14 18 380 1 377 4.45e-51 176
MsG0780037251.01.T01 MTR_7g098510 33.415 407 217 15 8 380 2 388 8.67e-47 164
MsG0780037251.01.T01 MTR_1g041245 33.248 391 209 13 27 381 10 384 1.32e-46 164
MsG0780037251.01.T01 MTR_7g098570 34.673 398 210 14 23 386 15 396 1.90e-46 166
MsG0780037251.01.T01 MTR_7g098480 34.398 407 217 14 8 383 2 389 2.25e-46 166
MsG0780037251.01.T01 MTR_2g007500 38.393 336 162 13 21 323 7 330 3.08e-45 159
MsG0780037251.01.T01 MTR_7g007080 36.111 396 193 16 28 383 4 379 4.93e-45 160
MsG0780037251.01.T01 MTR_2g007550 33.588 393 161 14 21 380 7 332 2.22e-44 157
MsG0780037251.01.T01 MTR_7g056433 33.827 405 205 17 17 380 4 386 5.47e-44 157
MsG0780037251.01.T01 MTR_5g045170 33.995 403 204 13 22 382 8 390 1.01e-43 157
MsG0780037251.01.T01 MTR_3g026920 32.477 428 186 16 22 382 13 404 4.28e-42 152
MsG0780037251.01.T01 MTR_3g036250 33.676 389 194 15 27 380 4 363 6.72e-42 151
MsG0780037251.01.T01 MTR_7g032380 32.216 388 189 14 26 381 9 354 1.21e-41 150
MsG0780037251.01.T01 MTR_5g058100 34.653 404 204 18 22 385 3 386 5.22e-41 149
MsG0780037251.01.T01 MTR_7g055943 31.651 436 226 15 4 385 6 423 1.70e-40 149
MsG0780037251.01.T01 MTR_4g098590 35.714 378 187 14 30 363 1 366 3.11e-40 147
MsG0780037251.01.T01 MTR_1g085120 32.412 398 213 13 28 385 92 473 8.36e-40 147
MsG0780037251.01.T01 MTR_1g085120 32.412 398 213 13 28 385 167 548 1.71e-39 148
MsG0780037251.01.T01 MTR_7g056287 34.010 394 200 16 28 385 3 372 8.06e-39 143
MsG0780037251.01.T01 MTR_6g022360 34.190 389 196 14 27 380 42 405 1.69e-38 143
MsG0780037251.01.T01 MTR_4g039440 33.250 400 208 12 27 385 33 414 3.55e-38 142
MsG0780037251.01.T01 MTR_7g056277 34.264 394 199 17 28 385 259 628 5.26e-38 145
MsG0780037251.01.T01 MTR_5g008950 30.052 386 211 14 30 380 1 362 1.23e-37 140
MsG0780037251.01.T01 MTR_1g108800 33.422 377 188 13 27 382 7 341 1.29e-37 139
MsG0780037251.01.T01 MTR_7g033915 32.368 380 206 15 27 381 10 363 3.45e-37 138
MsG0780037251.01.T01 MTR_7g033470 59.574 141 33 7 16 152 1 121 5.01e-37 131
MsG0780037251.01.T01 MTR_5g058000 33.418 395 201 16 24 381 4 373 5.03e-37 138
MsG0780037251.01.T01 MTR_7g026500 31.527 406 202 18 26 380 12 392 8.69e-37 138
MsG0780037251.01.T01 MTR_7g033990 31.738 397 212 14 16 375 1 375 9.84e-37 138
MsG0780037251.01.T01 MTR_6g011460 32.836 402 208 15 27 387 45 425 1.55e-36 138
MsG0780037251.01.T01 MTR_1g108820 31.172 401 211 15 26 382 6 385 2.06e-36 137
MsG0780037251.01.T01 MTR_0543s0010 32.500 400 215 15 10 380 74 447 3.73e-36 137
MsG0780037251.01.T01 MTR_3g105060 32.908 392 193 17 26 380 12 370 7.82e-36 135
MsG0780037251.01.T01 MTR_7g088260 32.494 397 208 18 22 380 85 459 1.03e-35 136
MsG0780037251.01.T01 MTR_6g040270 30.670 388 217 13 30 382 10 380 1.31e-35 134
MsG0780037251.01.T01 MTR_6g045333 31.860 430 207 15 6 381 47 444 2.39e-35 135
MsG0780037251.01.T01 MTR_1089s0010 30.534 393 221 13 27 385 7 381 2.55e-35 134
MsG0780037251.01.T01 MTR_7g075800 30.570 386 195 13 26 343 7 387 5.43e-35 136
MsG0780037251.01.T01 MTR_1g066830 29.383 405 214 14 25 381 5 385 6.97e-35 132
MsG0780037251.01.T01 MTR_7g034115 31.759 381 213 12 27 375 10 375 4.07e-34 130
MsG0780037251.01.T01 MTR_0492s0020 32.973 370 194 14 10 351 74 417 1.43e-33 130
MsG0780037251.01.T01 MTR_7g056020 32.095 377 203 12 28 376 16 367 1.99e-33 132
MsG0780037251.01.T01 MTR_7g032370 31.200 375 201 15 39 381 1 350 2.48e-33 127
MsG0780037251.01.T01 MTR_3g108150 31.218 394 208 16 28 380 13 384 8.05e-33 127
MsG0780037251.01.T01 MTR_7g115270 29.877 405 215 14 28 380 12 399 9.30e-33 127
MsG0780037251.01.T01 MTR_5g073370 29.825 399 226 13 28 389 5 386 1.56e-32 126
MsG0780037251.01.T01 MTR_6g022500 30.457 394 222 12 27 384 100 477 3.42e-32 127
MsG0780037251.01.T01 MTR_7g034120 37.603 242 119 12 156 384 87 309 3.95e-32 123
MsG0780037251.01.T01 MTR_3g023630 32.134 389 205 14 27 380 7 371 4.44e-32 125
MsG0780037251.01.T01 MTR_5g007410 30.612 392 217 14 30 380 28 405 1.88e-31 124
MsG0780037251.01.T01 MTR_5g045510 29.676 401 213 15 19 382 3 371 7.99e-31 121
MsG0780037251.01.T01 MTR_2g007530 33.421 380 179 16 21 382 13 336 9.51e-31 120
MsG0780037251.01.T01 MTR_3g467400 31.407 398 194 17 27 380 2 364 1.50e-30 120
MsG0780037251.01.T01 MTR_5g039450 29.820 389 206 12 24 380 2 355 1.53e-30 120
MsG0780037251.01.T01 MTR_3g108560 30.402 398 218 16 17 380 14 386 2.05e-30 120
MsG0780037251.01.T01 MTR_0009s0080 31.335 367 196 11 30 355 20 371 3.94e-30 120
MsG0780037251.01.T01 MTR_5g008920 31.186 388 215 18 26 380 10 378 5.73e-30 119
MsG0780037251.01.T01 MTR_7g114710 31.234 397 185 17 26 380 11 361 1.16e-29 118
MsG0780037251.01.T01 MTR_3g071850 29.730 407 226 14 14 375 10 401 1.31e-29 121
MsG0780037251.01.T01 MTR_5g073340 31.832 333 183 13 22 333 2 311 2.12e-29 116
MsG0780037251.01.T01 MTR_3g040700 29.915 351 186 11 27 343 42 366 5.15e-29 117
MsG0780037251.01.T01 MTR_1g085120 32.653 294 156 9 28 282 179 469 1.58e-28 116
MsG0780037251.01.T01 MTR_7g021990 29.688 384 218 13 27 373 47 415 1.64e-28 115
MsG0780037251.01.T01 MTR_6g044560 28.505 428 219 13 18 386 168 567 3.36e-28 116
MsG0780037251.01.T01 MTR_7g021950 29.688 384 218 13 27 373 47 415 5.84e-28 115
MsG0780037251.01.T01 MTR_5g061680 29.969 327 166 11 18 315 1 293 6.61e-28 112
MsG0780037251.01.T01 MTR_5g031970 28.645 391 204 13 22 382 10 355 3.94e-27 110
MsG0780037251.01.T01 MTR_7g034090 31.937 382 173 15 25 386 1 315 4.55e-27 112
MsG0780037251.01.T01 MTR_2g036470 29.899 398 220 15 28 382 14 395 4.94e-27 111
MsG0780037251.01.T01 MTR_6g044572 28.675 415 217 13 27 386 1 391 5.73e-27 111
MsG0780037251.01.T01 MTR_7g056420 30.481 374 213 15 28 377 9 359 9.42e-27 113
MsG0780037251.01.T01 MTR_7g056430 30.481 374 213 15 28 377 9 359 1.16e-26 112
MsG0780037251.01.T01 MTR_7g022105 31.856 361 201 13 27 354 48 396 3.18e-26 109
MsG0780037251.01.T01 MTR_1g108820 31.629 313 165 11 26 296 6 311 3.32e-25 105
MsG0780037251.01.T01 MTR_3g095600 33.333 234 137 7 25 247 1 226 4.93e-25 103
MsG0780037251.01.T01 MTR_5g063950 30.239 377 204 13 33 380 13 359 1.27e-24 103
MsG0780037251.01.T01 MTR_3g082890 28.643 398 224 14 1 353 74 456 1.64e-24 105
MsG0780037251.01.T01 MTR_8g085430 29.156 391 175 17 26 384 9 329 4.10e-24 102
MsG0780037251.01.T01 MTR_7g034110 30.460 348 133 14 27 329 10 293 1.02e-23 101
MsG0780037251.01.T01 MTR_7g060470 28.460 383 191 15 28 352 3 360 4.70e-23 100
MsG0780037251.01.T01 MTR_2g007610 39.877 163 85 5 223 385 4 153 7.93e-22 92.0
MsG0780037251.01.T01 MTR_5g013500 30.385 260 138 11 150 380 117 362 8.39e-22 96.3
MsG0780037251.01.T01 MTR_4g056020 26.744 430 209 15 28 364 9 425 1.12e-21 96.7
MsG0780037251.01.T01 MTR_3g087260 32.463 268 152 11 128 380 201 454 1.26e-21 96.7
MsG0780037251.01.T01 MTR_3g087260 31.047 277 160 9 28 288 12 273 7.26e-19 88.2
MsG0780037251.01.T01 MTR_5g039490 27.941 408 228 15 7 382 2 375 2.07e-21 95.1
MsG0780037251.01.T01 MTR_4g056030 26.097 433 212 15 28 366 9 427 2.07e-21 95.9
MsG0780037251.01.T01 MTR_3g108560 29.966 297 165 10 17 282 14 298 5.54e-21 92.8
MsG0780037251.01.T01 MTR_6g022520 33.571 280 151 9 126 385 51 315 5.56e-21 93.2
MsG0780037251.01.T01 MTR_1g038710 27.982 436 210 16 25 366 16 441 2.73e-20 92.4
MsG0780037251.01.T01 MTR_2g007460 49.000 100 33 3 16 113 1 84 4.55e-20 85.1
MsG0780037251.01.T01 MTR_7g056447 38.122 181 89 5 28 189 9 185 4.91e-20 89.7
MsG0780037251.01.T01 MTR_5g054920 34.536 194 98 9 177 355 2 181 1.00e-19 86.7
MsG0780037251.01.T01 MTR_5g061410 33.577 274 147 12 33 284 10 270 5.11e-19 86.7
MsG0780037251.01.T01 MTR_5g065100 29.442 394 209 15 16 384 1 350 8.98e-19 87.8
MsG0780037251.01.T01 MTR_5g012840 27.654 358 173 15 53 380 14 315 9.32e-19 86.7
MsG0780037251.01.T01 MTR_5g080710 27.913 412 203 18 20 352 25 421 5.19e-18 85.9
MsG0780037251.01.T01 MTR_8g062270 25.551 454 223 18 26 380 14 451 5.47e-18 85.9
MsG0780037251.01.T01 MTR_3g048290 30.412 194 103 5 27 193 22 210 6.31e-18 85.5
MsG0780037251.01.T01 MTR_1g077420 32.701 211 120 7 28 218 4 212 1.05e-17 82.8
MsG0780037251.01.T01 MTR_5g058350 36.310 168 98 4 27 194 7 165 1.50e-17 80.1
MsG0780037251.01.T01 MTR_4g080787 28.000 225 112 8 28 215 19 230 7.24e-17 82.4
MsG0780037251.01.T01 MTR_4g080773 28.235 255 122 10 28 245 19 249 2.65e-16 80.9
MsG0780037251.01.T01 MTR_4g080773 28.235 255 122 10 28 245 19 249 2.76e-16 80.9
MsG0780037251.01.T01 MTR_4g134150 31.197 234 122 9 28 238 14 231 3.42e-16 77.8
MsG0780037251.01.T01 MTR_8g077460 27.249 389 223 13 28 381 10 373 4.14e-16 79.7
MsG0780037251.01.T01 MTR_5g039470 28.926 242 137 6 127 347 100 327 4.38e-16 79.0
MsG0780037251.01.T01 MTR_8g469020 25.597 461 216 20 28 380 7 448 6.14e-16 79.7
MsG0780037251.01.T01 MTR_3g109982 30.182 275 157 11 128 383 220 478 7.57e-16 79.7
MsG0780037251.01.T01 MTR_4g032730 25.325 462 232 18 27 383 14 467 1.02e-15 79.0
MsG0780037251.01.T01 MTR_7g056280 28.358 268 143 10 133 380 332 570 1.13e-15 79.0
MsG0780037251.01.T01 MTR_7g056280 34.444 180 81 7 30 180 8 179 1.10e-11 66.6
MsG0780037251.01.T01 MTR_3g106960 37.195 164 83 9 218 375 41 190 1.15e-15 76.3
MsG0780037251.01.T01 MTR_8g465650 32.804 189 91 6 20 177 4 187 2.83e-15 77.0
MsG0780037251.01.T01 MTR_4g080590 31.111 180 108 4 28 191 23 202 3.54e-15 76.6
MsG0780037251.01.T01 MTR_4g080590 31.111 180 108 4 28 191 23 202 3.93e-15 77.0
MsG0780037251.01.T01 MTR_7g084080 34.118 170 91 5 28 177 17 185 5.17e-15 75.5
MsG0780037251.01.T01 MTR_8g062080 24.573 468 230 20 7 380 4 442 7.76e-15 76.3
MsG0780037251.01.T01 MTR_1g053050 46.512 86 39 3 298 383 37 115 1.14e-14 70.5
MsG0780037251.01.T01 MTR_5g087940 33.742 163 91 5 28 177 26 184 1.19e-14 75.5
MsG0780037251.01.T01 MTR_4g093690 28.685 251 154 8 28 258 18 263 1.34e-14 73.9
MsG0780037251.01.T01 MTR_8g468810 26.638 458 209 20 28 380 25 460 1.81e-14 75.1
MsG0780037251.01.T01 MTR_6g018660 30.601 183 95 4 26 177 18 199 1.96e-14 74.7
MsG0780037251.01.T01 MTR_3g023470 32.738 168 94 4 28 177 15 181 3.00e-14 73.9
MsG0780037251.01.T01 MTR_8g070950 24.208 442 229 19 24 380 11 431 5.33e-14 73.6
MsG0780037251.01.T01 MTR_3g023270 33.929 168 93 5 25 177 9 173 5.80e-14 72.8
MsG0780037251.01.T01 MTR_5g082930 42.529 87 46 2 30 112 17 103 6.23e-14 70.9
MsG0780037251.01.T01 MTR_8g465380 32.609 184 89 6 24 177 8 186 6.75e-14 72.8
MsG0780037251.01.T01 MTR_3g006580 34.337 166 90 5 30 177 35 199 1.05e-13 72.4
MsG0780037251.01.T01 MTR_5g084070 34.031 191 95 6 27 196 12 192 1.15e-13 72.4
MsG0780037251.01.T01 MTR_4g130200 25.916 382 209 14 28 364 20 372 1.43e-13 72.0
MsG0780037251.01.T01 MTR_7g098590 42.500 120 51 5 27 137 17 127 2.41e-13 67.0
MsG0780037251.01.T01 MTR_3g107140 33.728 169 69 5 59 192 23 183 5.06e-13 67.8
MsG0780037251.01.T01 MTR_3g019240 34.911 169 90 4 28 177 26 193 6.24e-13 70.1
MsG0780037251.01.T01 MTR_3g036320 31.937 191 105 7 7 177 2 187 7.38e-13 69.7
MsG0780037251.01.T01 MTR_5g060570 32.143 168 94 6 28 177 17 182 7.50e-13 68.6
MsG0780037251.01.T01 MTR_1g014450 31.731 208 99 8 23 196 11 209 9.00e-13 69.7
MsG0780037251.01.T01 MTR_6g009020 29.730 185 86 7 27 172 15 194 1.09e-12 69.3
MsG0780037251.01.T01 MTR_7g023310 28.426 197 123 5 14 193 12 207 1.10e-12 69.7
MsG0780037251.01.T01 MTR_2g007100 62.500 48 18 0 27 74 1 48 1.25e-12 63.5
MsG0780037251.01.T01 MTR_7g021630 30.556 216 102 8 28 206 17 221 1.26e-12 68.9
MsG0780037251.01.T01 MTR_7g021630 30.556 216 102 8 28 206 17 221 1.43e-12 68.9
MsG0780037251.01.T01 MTR_5g039970 27.895 190 117 4 28 197 19 208 1.82e-12 68.2
MsG0780037251.01.T01 MTR_8g467800 26.244 442 226 17 28 380 20 450 1.92e-12 68.9
MsG0780037251.01.T01 MTR_2g103680 55.000 60 23 1 16 75 1 56 2.80e-12 63.9
MsG0780037251.01.T01 MTR_4g050930 34.706 170 88 7 28 176 29 196 2.83e-12 68.6
MsG0780037251.01.T01 MTR_4g050930 34.706 170 88 7 28 176 29 196 3.02e-12 68.2
MsG0780037251.01.T01 MTR_8g468810 31.122 196 102 6 28 193 25 217 4.55e-12 67.0
MsG0780037251.01.T01 MTR_8g468810 31.122 196 102 6 28 193 25 217 4.85e-12 67.0
MsG0780037251.01.T01 MTR_8g066650 33.929 168 92 5 28 177 80 246 5.79e-12 67.4
MsG0780037251.01.T01 MTR_8g468810 31.122 196 102 6 28 193 25 217 6.32e-12 66.6
MsG0780037251.01.T01 MTR_3g463820 32.948 173 91 6 28 176 13 184 7.50e-12 65.9
MsG0780037251.01.T01 MTR_8g468810 31.122 196 102 6 28 193 25 217 7.80e-12 66.6
MsG0780037251.01.T01 MTR_3g023440 30.481 187 103 5 28 193 3 183 2.05e-11 65.5
MsG0780037251.01.T01 MTR_3g463830 31.395 172 92 5 28 176 63 231 3.37e-11 64.7
MsG0780037251.01.T01 MTR_8g445780 29.293 297 134 14 28 277 13 280 3.47e-11 64.7
MsG0780037251.01.T01 MTR_1g021825 26.117 291 177 8 12 279 72 347 3.49e-11 65.1
MsG0780037251.01.T01 MTR_2g094750 27.338 278 134 11 12 244 73 327 4.32e-11 64.7
MsG0780037251.01.T01 MTR_3g023330 32.558 172 88 6 28 177 15 180 5.18e-11 63.9
MsG0780037251.01.T01 MTR_1g492880 46.429 84 42 2 28 110 6 87 6.15e-11 59.3
MsG0780037251.01.T01 MTR_1g492880 46.429 84 42 2 28 110 6 87 6.24e-11 59.3
MsG0780037251.01.T01 MTR_3g036240 31.609 174 94 4 28 179 15 185 8.86e-11 63.5
MsG0780037251.01.T01 MTR_1g090900 32.759 174 97 4 28 182 11 183 9.65e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037251.01.T01 AT4G00160 29.638 442 222 16 23 384 11 443 4.84e-28 115
MsG0780037251.01.T01 AT3G52680 29.932 441 220 16 23 384 16 446 1.77e-24 104
MsG0780037251.01.T01 AT3G50710 28.406 433 222 15 27 380 1 424 3.24e-23 100
MsG0780037251.01.T01 AT5G44940 29.008 393 220 18 28 382 5 376 6.39e-23 99.4
MsG0780037251.01.T01 AT5G56370 27.945 433 218 16 27 380 1 418 1.44e-22 99.0
MsG0780037251.01.T01 AT5G56370 27.945 433 218 16 27 380 1 418 1.44e-22 99.0
MsG0780037251.01.T01 AT5G56420 27.972 429 218 14 28 380 6 419 1.45e-22 99.0
MsG0780037251.01.T01 AT5G56420 27.972 429 218 14 28 380 6 419 1.45e-22 99.0
MsG0780037251.01.T01 AT5G56420 27.972 429 218 14 28 380 6 419 1.45e-22 99.0
MsG0780037251.01.T01 AT5G56820 27.934 426 217 15 28 380 15 423 5.23e-22 97.4
MsG0780037251.01.T01 AT4G10400 28.235 425 217 16 27 381 1 407 7.45e-22 96.7
MsG0780037251.01.T01 AT4G10400 28.235 425 217 16 27 381 1 407 7.45e-22 96.7
MsG0780037251.01.T01 AT4G10400 28.235 425 217 16 27 381 1 407 7.45e-22 96.7
MsG0780037251.01.T01 AT1G16930 36.066 183 94 4 28 191 15 193 2.14e-21 95.9
MsG0780037251.01.T01 AT1G16930 36.066 183 94 4 28 191 15 193 2.14e-21 95.9
MsG0780037251.01.T01 AT1G16930 36.066 183 94 4 28 191 15 193 2.14e-21 95.9
MsG0780037251.01.T01 AT4G13965 27.635 427 229 15 25 382 7 422 4.92e-20 91.7
MsG0780037251.01.T01 AT5G56370 28.173 323 160 9 27 282 1 318 7.27e-20 90.1
MsG0780037251.01.T01 AT5G60610 28.674 279 144 9 27 280 1 249 1.24e-19 90.1
MsG0780037251.01.T01 AT5G60610 28.674 279 144 9 27 280 1 249 1.24e-19 90.1
MsG0780037251.01.T01 AT4G00315 34.043 188 99 5 27 191 1 186 2.02e-19 90.1
MsG0780037251.01.T01 AT5G22670 36.066 183 96 5 28 193 11 189 5.04e-19 89.0
MsG0780037251.01.T01 AT4G09920 34.392 189 99 5 27 194 1 185 5.11e-19 87.0
MsG0780037251.01.T01 AT4G09920 34.392 189 99 5 27 194 1 185 5.11e-19 87.0
MsG0780037251.01.T01 AT4G09920 34.392 189 99 5 27 194 1 185 5.11e-19 87.0
MsG0780037251.01.T01 AT5G25850 31.313 198 117 5 11 193 3 196 6.91e-19 88.6
MsG0780037251.01.T01 AT5G38590 35.676 185 100 6 27 194 1 183 8.50e-19 86.3
MsG0780037251.01.T01 AT4G09920 34.392 189 99 5 27 194 1 185 1.15e-18 86.3
MsG0780037251.01.T01 AT4G09920 34.392 189 99 5 27 194 1 185 1.15e-18 86.3
MsG0780037251.01.T01 AT3G52680 37.500 192 97 7 23 194 16 204 1.80e-18 86.7
MsG0780037251.01.T01 AT3G59200 34.286 210 102 9 25 207 4 204 1.85e-18 86.3
MsG0780037251.01.T01 AT5G38590 35.676 185 100 6 27 194 1 183 2.74e-18 86.3
MsG0780037251.01.T01 AT2G26860 35.567 194 88 8 27 191 1 186 4.35e-18 85.9
MsG0780037251.01.T01 AT2G26860 35.567 194 88 8 27 191 1 186 4.35e-18 85.9
MsG0780037251.01.T01 AT5G38570 27.792 403 212 17 27 380 1 373 5.71e-18 85.1
MsG0780037251.01.T01 AT3G58880 36.453 203 96 8 27 201 2 199 5.95e-18 85.5
MsG0780037251.01.T01 AT3G59200 34.286 210 102 9 25 207 4 204 6.36e-18 85.9
MsG0780037251.01.T01 AT5G53840 37.173 191 92 6 21 191 11 193 1.54e-17 84.3
MsG0780037251.01.T01 AT4G15060 32.086 187 103 4 27 191 25 209 2.23e-17 84.0
MsG0780037251.01.T01 AT1G60400 32.821 195 99 6 22 191 8 195 2.74e-17 83.2
MsG0780037251.01.T01 AT4G15060 32.086 187 103 4 27 191 171 355 3.26e-17 84.0
MsG0780037251.01.T01 AT3G49030 27.313 454 201 22 24 380 17 438 3.36e-17 83.2
MsG0780037251.01.T01 AT1G69630 33.503 197 96 5 27 197 17 204 3.47e-17 83.2
MsG0780037251.01.T01 AT5G44980 34.375 192 101 6 28 197 4 192 4.69e-17 81.6
MsG0780037251.01.T01 AT5G44980 34.375 192 101 6 28 197 4 192 4.69e-17 81.6
MsG0780037251.01.T01 AT3G58860 26.462 359 159 15 27 289 6 355 8.89e-17 82.0
MsG0780037251.01.T01 AT1G80470 34.066 182 101 6 28 191 15 195 1.12e-16 82.0
MsG0780037251.01.T01 AT3G58920 30.415 217 103 8 27 206 1 206 1.13e-16 82.0
MsG0780037251.01.T01 AT3G51530 24.499 449 225 15 28 385 30 455 1.20e-16 81.6
MsG0780037251.01.T01 AT5G44980 34.375 192 101 6 28 197 4 192 1.22e-16 81.6
MsG0780037251.01.T01 AT5G44980 34.375 192 101 6 28 197 4 192 1.22e-16 81.6
MsG0780037251.01.T01 AT5G56810 31.383 188 102 5 28 193 15 197 1.22e-16 80.5
MsG0780037251.01.T01 AT1G32375 31.720 186 104 4 27 191 1 184 2.21e-16 80.9
MsG0780037251.01.T01 AT1G32375 31.720 186 104 4 27 191 1 184 2.21e-16 80.9
MsG0780037251.01.T01 AT2G26030 31.522 184 106 4 28 193 4 185 2.41e-16 80.9
MsG0780037251.01.T01 AT2G26030 31.522 184 106 4 28 193 4 185 2.54e-16 80.9
MsG0780037251.01.T01 AT2G26030 31.522 184 106 4 28 193 4 185 2.54e-16 80.9
MsG0780037251.01.T01 AT5G56810 31.383 188 102 5 28 193 15 197 2.59e-16 80.5
MsG0780037251.01.T01 AT5G56560 30.363 303 140 13 29 288 6 280 2.84e-16 80.9
MsG0780037251.01.T01 AT5G53635 29.907 214 105 6 30 215 2 198 3.37e-16 80.1
MsG0780037251.01.T01 AT4G22280 35.484 186 93 6 27 191 1 180 4.02e-16 79.3
MsG0780037251.01.T01 AT5G22720 31.696 224 120 8 22 219 17 233 4.12e-16 80.1
MsG0780037251.01.T01 AT3G62430 32.683 205 106 6 27 206 1 198 4.60e-16 79.7
MsG0780037251.01.T01 AT4G14103 32.710 214 102 9 28 211 8 209 4.64e-16 79.3
MsG0780037251.01.T01 AT4G14103 32.710 214 102 9 28 211 8 209 4.64e-16 79.3
MsG0780037251.01.T01 AT4G22280 35.484 186 93 6 27 191 1 180 4.66e-16 79.7
MsG0780037251.01.T01 AT5G27750 29.082 196 108 3 26 193 3 195 4.93e-16 79.3
MsG0780037251.01.T01 AT4G14103 32.710 214 102 9 28 211 8 209 5.87e-16 79.7
MsG0780037251.01.T01 AT5G27750 29.082 196 108 3 26 193 3 195 6.10e-16 79.7
MsG0780037251.01.T01 AT3G59190 33.824 204 91 9 28 196 12 206 6.88e-16 79.0
MsG0780037251.01.T01 AT3G59210 33.163 196 100 6 28 196 7 198 1.08e-15 79.0
MsG0780037251.01.T01 AT3G59210 33.163 196 100 6 28 196 7 198 1.08e-15 79.0
MsG0780037251.01.T01 AT3G59210 33.163 196 100 6 28 196 7 198 1.08e-15 79.0
MsG0780037251.01.T01 AT3G59210 33.163 196 100 6 28 196 7 198 1.08e-15 79.0
MsG0780037251.01.T01 AT3G59210 33.163 196 100 6 28 196 7 198 1.08e-15 79.0
MsG0780037251.01.T01 AT1G13780 31.188 202 106 7 20 191 2 200 1.27e-15 77.8
MsG0780037251.01.T01 AT4G13985 31.313 198 99 8 27 193 18 209 1.49e-15 78.6
MsG0780037251.01.T01 AT3G59190 33.824 204 91 9 28 196 12 206 1.59e-15 78.6
MsG0780037251.01.T01 AT1G51370 30.952 210 117 6 28 219 19 218 1.70e-15 78.2
MsG0780037251.01.T01 AT2G42720 31.980 197 99 4 27 193 1 192 2.07e-15 77.8
MsG0780037251.01.T01 AT1G51370 30.952 210 117 6 28 219 19 218 2.24e-15 77.8
MsG0780037251.01.T01 AT1G13780 31.188 202 106 7 20 191 2 200 2.32e-15 77.8
MsG0780037251.01.T01 AT1G51370 30.952 210 117 6 28 219 19 218 2.54e-15 77.0
MsG0780037251.01.T01 AT5G53640 32.065 184 96 5 28 191 22 196 2.92e-15 75.1
MsG0780037251.01.T01 AT1G58310 30.802 237 121 7 28 225 8 240 3.43e-15 77.4
MsG0780037251.01.T01 AT3G58980 29.851 268 132 12 27 265 1 241 3.73e-15 77.4
MsG0780037251.01.T01 AT3G59240 29.469 207 109 7 28 205 8 206 4.14e-15 77.4
MsG0780037251.01.T01 AT3G62440 31.507 219 99 8 27 207 1 206 4.21e-15 77.0
MsG0780037251.01.T01 AT4G26350 34.043 188 98 6 27 193 1 183 4.33e-15 77.0
MsG0780037251.01.T01 AT5G56560 30.729 192 89 5 29 191 6 182 4.59e-15 76.6
MsG0780037251.01.T01 AT5G38386 26.266 316 174 11 27 289 1 310 7.49e-15 75.9
MsG0780037251.01.T01 AT5G38386 26.266 316 174 11 27 289 1 310 7.49e-15 75.9
MsG0780037251.01.T01 AT3G56780 32.843 204 113 6 30 213 9 208 7.76e-15 75.9
MsG0780037251.01.T01 AT3G56780 32.843 204 113 6 30 213 9 208 9.14e-15 75.9
MsG0780037251.01.T01 AT3G56780 32.843 204 113 6 30 213 9 208 9.73e-15 75.9
MsG0780037251.01.T01 AT1G22000 24.740 481 224 20 10 387 11 456 1.19e-14 75.9
MsG0780037251.01.T01 AT5G18780 32.292 192 91 6 28 193 11 189 1.47e-14 75.1
MsG0780037251.01.T01 AT5G18780 32.292 192 91 6 28 193 11 189 1.47e-14 75.1
MsG0780037251.01.T01 AT5G44960 33.508 191 104 7 28 197 5 193 1.57e-14 75.1
MsG0780037251.01.T01 AT3G59170 32.110 218 99 8 24 193 3 219 1.94e-14 75.1
MsG0780037251.01.T01 AT5G18780 32.292 192 91 6 28 193 11 189 2.41e-14 74.7
MsG0780037251.01.T01 AT5G18780 32.292 192 91 6 28 193 11 189 2.41e-14 74.7
MsG0780037251.01.T01 AT5G38392 32.353 204 101 8 27 197 1 200 2.65e-14 72.0
MsG0780037251.01.T01 AT3G44060 31.383 188 104 5 33 197 4 189 2.81e-14 74.3
MsG0780037251.01.T01 AT3G59160 27.509 269 125 8 28 250 13 257 3.81e-14 74.3
MsG0780037251.01.T01 AT1G66290 30.808 198 105 6 19 193 17 205 4.47e-14 73.9
MsG0780037251.01.T01 AT3G58940 25.176 425 195 19 27 351 1 402 4.93e-14 74.3
MsG0780037251.01.T01 AT3G58940 25.176 425 195 19 27 351 1 402 4.93e-14 74.3
MsG0780037251.01.T01 AT1G16940 25.610 328 200 13 30 335 13 318 5.09e-14 73.6
MsG0780037251.01.T01 AT3G03030 30.412 194 108 6 27 193 1 194 6.29e-14 72.8
MsG0780037251.01.T01 AT5G22700 27.070 314 155 12 28 279 43 344 8.36e-14 73.2
MsG0780037251.01.T01 AT3G26930 25.339 442 219 16 28 380 21 440 8.74e-14 73.2
MsG0780037251.01.T01 AT4G13960 34.826 201 96 9 27 199 1 194 8.82e-14 73.2
MsG0780037251.01.T01 AT4G13960 34.826 201 96 9 27 199 1 194 8.82e-14 73.2
MsG0780037251.01.T01 AT3G58820 29.781 319 154 17 27 289 1 305 8.99e-14 72.8
MsG0780037251.01.T01 AT5G41840 32.683 205 101 6 24 193 10 212 9.99e-14 73.2
MsG0780037251.01.T01 AT3G49030 24.408 422 228 15 24 380 17 412 1.05e-13 72.8
MsG0780037251.01.T01 AT3G03040 32.642 193 104 6 27 193 1 193 1.05e-13 72.8
MsG0780037251.01.T01 AT3G03030 30.412 194 108 6 27 193 1 194 1.34e-13 72.4
MsG0780037251.01.T01 AT2G04230 30.348 201 88 8 28 191 13 198 1.74e-13 72.0
MsG0780037251.01.T01 AT5G18770 30.732 205 102 6 19 193 15 209 1.76e-13 71.6
MsG0780037251.01.T01 AT5G02930 27.645 293 158 10 22 292 22 282 2.28e-13 71.6
MsG0780037251.01.T01 AT1G21990 31.100 209 111 5 25 208 6 206 2.30e-13 71.6
MsG0780037251.01.T01 AT1G66300 29.353 201 115 5 15 193 13 208 3.11e-13 71.2
MsG0780037251.01.T01 AT5G18770 30.244 205 103 6 19 193 15 209 3.18e-13 71.2
MsG0780037251.01.T01 AT1G05080 24.368 435 236 12 28 380 13 436 3.89e-13 70.9
MsG0780037251.01.T01 AT1G66310 31.016 187 103 5 27 193 18 198 4.21e-13 70.9
MsG0780037251.01.T01 AT1G78760 29.630 189 99 5 28 191 16 195 4.21e-13 70.9
MsG0780037251.01.T01 AT3G49150 30.500 200 99 7 28 196 16 206 5.14e-13 70.9
MsG0780037251.01.T01 AT3G44810 30.102 196 109 4 23 191 2 196 6.97e-13 70.1
MsG0780037251.01.T01 AT3G42770 32.292 192 99 7 33 195 4 193 9.79e-13 70.1
MsG0780037251.01.T01 AT3G58900 31.443 194 102 7 27 193 1 190 1.15e-12 68.9
MsG0780037251.01.T01 AT3G58900 31.443 194 102 7 27 193 1 190 1.15e-12 68.9
MsG0780037251.01.T01 AT1G60410 28.723 188 105 4 28 191 10 192 1.29e-12 69.3
MsG0780037251.01.T01 AT3G58900 31.443 194 102 7 27 193 1 190 1.34e-12 68.6
MsG0780037251.01.T01 AT4G27050 32.500 200 101 5 28 193 4 203 1.85e-12 68.9
MsG0780037251.01.T01 AT4G27050 32.500 200 101 5 28 193 4 203 1.85e-12 68.9
MsG0780037251.01.T01 AT4G27050 32.500 200 101 5 28 193 4 203 1.85e-12 68.9
MsG0780037251.01.T01 AT4G27050 32.500 200 101 5 28 193 4 203 1.85e-12 68.9
MsG0780037251.01.T01 AT4G27050 32.500 200 101 5 28 193 4 203 1.85e-12 68.9
MsG0780037251.01.T01 AT3G58900 31.443 194 102 7 27 193 1 190 1.99e-12 68.9
MsG0780037251.01.T01 AT5G22700 32.105 190 100 6 28 196 43 224 1.99e-12 68.9
MsG0780037251.01.T01 AT3G59250 31.351 185 99 6 28 205 7 170 2.07e-12 68.6
MsG0780037251.01.T01 AT5G22700 32.105 190 100 6 28 196 6 187 2.75e-12 68.2
MsG0780037251.01.T01 AT5G22700 32.105 190 100 6 28 196 6 187 2.75e-12 68.2
MsG0780037251.01.T01 AT5G22700 32.105 190 100 6 28 196 6 187 2.75e-12 68.2
MsG0780037251.01.T01 AT5G22700 32.105 190 100 6 28 196 6 187 2.75e-12 68.2
MsG0780037251.01.T01 AT5G38390 32.447 188 103 8 27 197 1 181 3.08e-12 68.2
MsG0780037251.01.T01 AT1G52650 33.500 200 95 9 27 196 1 192 4.70e-12 67.8
MsG0780037251.01.T01 AT1G19070 38.750 80 48 1 27 106 1 79 5.16e-12 62.0
MsG0780037251.01.T01 AT5G56430 25.215 349 206 15 30 351 4 324 6.21e-12 67.0
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 8.42e-12 66.2
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 8.42e-12 66.2
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 8.42e-12 66.2
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 8.42e-12 66.2
MsG0780037251.01.T01 AT3G44090 32.308 195 95 8 33 198 29 215 8.72e-12 67.0
MsG0780037251.01.T01 AT5G38396 30.531 226 110 9 27 211 1 220 9.23e-12 66.6
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 29 207 9.70e-12 66.2
MsG0780037251.01.T01 AT1G26890 32.000 175 101 6 17 176 26 197 9.92e-12 65.9
MsG0780037251.01.T01 AT1G26890 32.000 175 101 6 17 176 26 197 9.92e-12 65.9
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 1.00e-11 66.2
MsG0780037251.01.T01 AT2G29910 32.804 189 94 5 28 193 5 183 1.00e-11 66.2
MsG0780037251.01.T01 AT1G26890 32.044 181 93 6 17 176 26 197 1.05e-11 66.2
MsG0780037251.01.T01 AT1G26890 32.044 181 93 6 17 176 26 197 1.05e-11 66.2
MsG0780037251.01.T01 AT1G26890 32.000 175 101 6 17 176 26 197 1.16e-11 66.2
MsG0780037251.01.T01 AT3G59150 31.707 205 109 7 28 205 13 213 1.30e-11 66.2
MsG0780037251.01.T01 AT3G26920 28.114 281 163 10 123 380 34 298 1.54e-11 65.1
MsG0780037251.01.T01 AT5G41630 29.110 292 140 16 28 286 12 269 1.57e-11 66.2
MsG0780037251.01.T01 AT1G48400 30.688 189 107 5 28 193 10 197 1.62e-11 66.2
MsG0780037251.01.T01 AT1G48400 30.688 189 107 5 28 193 10 197 2.06e-11 65.9
MsG0780037251.01.T01 AT5G22660 29.891 184 102 6 28 191 13 189 2.43e-11 64.7
MsG0780037251.01.T01 AT5G22660 29.891 184 102 6 28 191 13 189 2.73e-11 65.5
MsG0780037251.01.T01 AT3G58930 30.978 184 90 7 27 193 1 164 3.13e-11 65.1
MsG0780037251.01.T01 AT3G58930 30.978 184 90 7 27 193 1 164 3.13e-11 65.1
MsG0780037251.01.T01 AT1G78840 32.796 186 104 7 28 197 5 185 3.15e-11 65.1
MsG0780037251.01.T01 AT1G78840 32.796 186 104 7 28 197 5 185 3.15e-11 65.1
MsG0780037251.01.T01 AT5G44850 30.072 276 155 14 123 380 73 328 3.21e-11 64.3
MsG0780037251.01.T01 AT3G59230 27.064 218 105 8 28 206 12 214 3.80e-11 65.1
MsG0780037251.01.T01 AT5G52460 27.273 352 212 12 28 364 17 339 5.85e-11 63.9
MsG0780037251.01.T01 AT3G60040 33.495 206 98 11 23 191 8 211 5.99e-11 64.7
MsG0780037251.01.T01 AT3G60040 33.495 206 98 11 23 191 228 431 6.42e-11 64.7
MsG0780037251.01.T01 AT3G60040 33.495 206 98 11 23 191 227 430 6.47e-11 64.7
MsG0780037251.01.T01 AT2G29930 29.891 184 106 7 28 193 12 190 6.50e-11 64.3
MsG0780037251.01.T01 AT2G29930 29.891 184 106 7 28 193 12 190 6.50e-11 64.3
MsG0780037251.01.T01 AT3G60040 32.057 209 97 9 23 191 227 430 6.88e-11 64.3
MsG0780037251.01.T01 AT3G60040 32.057 209 97 9 23 191 225 428 6.99e-11 64.3
MsG0780037251.01.T01 AT3G44080 27.852 298 156 14 33 281 12 299 7.12e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGCTCAATTCTATTGATA+TGG 0.178231 7:-22459712 MsG0780037251.01.T01:CDS
AGGCAGCCTAGAACAAATTT+TGG 0.189199 7:+22459060 None:intergenic
GTCTTTGGATCTAGAGTCTT+TGG 0.222041 7:+22459911 None:intergenic
GCACCAAATGAGTTAAATTA+TGG 0.234517 7:+22459307 None:intergenic
TTCCATCCGCAGTTTCATTC+TGG 0.245539 7:-22459832 MsG0780037251.01.T01:CDS
TCAAAATCTTGACCTTTATC+AGG 0.270976 7:-22459232 MsG0780037251.01.T01:intron
CACGCATAGTACAAGTTATT+AGG 0.278383 7:+22459028 None:intergenic
GAATTCGTCGAAGCTGTCTT+TGG 0.282437 7:+22459896 None:intergenic
GCCCACCCAAAATTTGTTCT+AGG 0.295568 7:-22459066 MsG0780037251.01.T01:CDS
CGACTTTATGATATCGTTGT+TGG 0.317685 7:-22459789 MsG0780037251.01.T01:CDS
GTTCCATAATTTAACTCATT+TGG 0.321848 7:-22459310 MsG0780037251.01.T01:CDS
GAGAAGAGAGAATATGAATT+AGG 0.322185 7:+22460024 None:intergenic
GCCACCGCCGTTGAAGTTTC+CGG 0.329816 7:+22460080 None:intergenic
CAAAGAGATGGAAGAATCTA+TGG 0.342026 7:-22459965 MsG0780037251.01.T01:CDS
TGCCTTTGAATACTTCAAAT+AGG 0.357365 7:+22459559 None:intergenic
TGCTCTGTTCAACATTGTTA+AGG 0.365985 7:+22459512 None:intergenic
TTGGGTGGGCCCAGGTTTCA+TGG 0.368811 7:+22459079 None:intergenic
GCACTTATGCAGGCTGGAAC+TGG 0.379144 7:-22459539 MsG0780037251.01.T01:CDS
TGAAGTGAGAAAGGCTTGTT+TGG 0.387146 7:+22459995 None:intergenic
ATTTGGTGCTGAACTATGAT+TGG 0.389609 7:-22459293 MsG0780037251.01.T01:CDS
AGGTGAAGATCTTCAAGAAT+TGG 0.390384 7:+22459579 None:intergenic
GTACAGGTAAGGATAGAATA+AGG 0.399371 7:+22459750 None:intergenic
CTTCAATTCTTTCAAAGAGA+TGG 0.401205 7:-22459977 MsG0780037251.01.T01:CDS
AAGCTCAATTCTATTGATAT+GGG 0.412327 7:-22459711 MsG0780037251.01.T01:CDS
CAACGGCGGTGGCCGTAGAT+AGG 0.415438 7:-22460070 MsG0780037251.01.T01:CDS
TGAAAGAATTGAAGTGAGAA+AGG 0.416065 7:+22459986 None:intergenic
ATCTAGAGTCTTTGGCTTCG+AGG 0.425290 7:+22459919 None:intergenic
GATCTCATGAATCTTATAGA+AGG 0.426483 7:-22459606 MsG0780037251.01.T01:CDS
ACTATGCGTGACTTTGCATT+TGG 0.429624 7:-22459015 MsG0780037251.01.T01:CDS
TCGTAACAGAATGTCTTTGC+CGG 0.436570 7:-22460099 MsG0780037251.01.T01:CDS
TTAAGAAACAAACCTGATAA+AGG 0.439287 7:+22459220 None:intergenic
GCTTCGAGGAATTCGACATC+TGG 0.440348 7:+22459933 None:intergenic
AGATAGGATCAGCAATTTAC+CGG 0.443432 7:-22460054 MsG0780037251.01.T01:CDS
GGATAGAATAAGGCAATTCA+TGG 0.446386 7:+22459760 None:intergenic
ATGCGTGACTTTGCATTTGG+AGG 0.448414 7:-22459012 MsG0780037251.01.T01:CDS
ACGTAATGTTAGTCAAATGT+AGG 0.456146 7:+22459643 None:intergenic
GAGGGTAATGTTACTTGAAA+AGG 0.456308 7:+22459675 None:intergenic
CTATGACAATCTGGTGCTCC+AGG 0.456895 7:-22458927 MsG0780037251.01.T01:CDS
ACTTGTGGGCATGACTACTT+TGG 0.458157 7:-22459111 MsG0780037251.01.T01:CDS
GCCGGAAACTTCAACGGCGG+TGG 0.459422 7:-22460081 MsG0780037251.01.T01:CDS
GAATTGAGCTTAAGAACAAC+AGG 0.485538 7:+22459723 None:intergenic
TCATGCCCACAAGTCTTGTC+TGG 0.487339 7:+22459120 None:intergenic
TTGCAACGATATATAACATT+CGG 0.488841 7:+22459482 None:intergenic
GATAGAATAAGGCAATTCAT+GGG 0.498576 7:+22459761 None:intergenic
TTTGGTGCTGAACTATGATT+GGG 0.504033 7:-22459292 MsG0780037251.01.T01:CDS
CACCTATTTGAAGTATTCAA+AGG 0.508948 7:-22459561 MsG0780037251.01.T01:CDS
CGTAATGTTAGTCAAATGTA+GGG 0.511881 7:+22459644 None:intergenic
CAATCTGGTGCTCCAGGAAA+CGG 0.513028 7:-22458921 MsG0780037251.01.T01:CDS
AAGAACAACAGGTGTTGTAC+AGG 0.513751 7:+22459734 None:intergenic
ATTGTCATAGTATCTAAAAC+CGG 0.515720 7:+22458940 None:intergenic
GTATTCAAAGGCACTTATGC+AGG 0.516387 7:-22459549 MsG0780037251.01.T01:CDS
GTGAGAAAGGCTTGTTTGGT+GGG 0.528660 7:+22459999 None:intergenic
CAACAGGTGTTGTACAGGTA+AGG 0.532771 7:+22459739 None:intergenic
TTCTACGCATAAGACTATCC+AGG 0.534923 7:-22459440 MsG0780037251.01.T01:CDS
GACAATATATCCATGAAACC+TGG 0.540479 7:-22459089 MsG0780037251.01.T01:CDS
TCAAAGGCACTTATGCAGGC+TGG 0.542665 7:-22459545 MsG0780037251.01.T01:CDS
ACATAATGTGATAGCTCTGT+AGG 0.546243 7:+22458989 None:intergenic
TAATACCAGACAAGACTTGT+GGG 0.546827 7:-22459125 MsG0780037251.01.T01:CDS
GTCTTTGCCGGAAACTTCAA+CGG 0.550415 7:-22460087 MsG0780037251.01.T01:CDS
TAAATTGCTGATCCTATCTA+CGG 0.551868 7:+22460058 None:intergenic
AGTGAGAAAGGCTTGTTTGG+TGG 0.554557 7:+22459998 None:intergenic
TTTCCTTGTTGGTTTCTGGT+CGG 0.556433 7:-22460149 None:intergenic
ATTTATTCTGAAGAATTCAC+CGG 0.562563 7:-22458959 MsG0780037251.01.T01:CDS
GCAAAGACATTCTGTTACGA+TGG 0.581012 7:+22460102 None:intergenic
TTTGCCGGAAACTTCAACGG+CGG 0.581546 7:-22460084 MsG0780037251.01.T01:CDS
ATATGAATTAGGATATCGTC+CGG 0.587342 7:+22460035 None:intergenic
AAGTTATTAGGTTTGATGAA+AGG 0.587470 7:+22459040 None:intergenic
TTGCGCTCGCGAGAAACCGC+AGG 0.604772 7:-22459861 MsG0780037251.01.T01:CDS
TGCAGAAGCTCTCGAACATG+AGG 0.608674 7:+22458864 None:intergenic
TGAGTTAAATTATGGAACGT+AGG 0.615219 7:+22459315 None:intergenic
ACAATATATCCATGAAACCT+GGG 0.619743 7:-22459088 MsG0780037251.01.T01:CDS
TCTACGCATAAGACTATCCA+GGG 0.638723 7:-22459439 MsG0780037251.01.T01:intron
ATAATACCAGACAAGACTTG+TGG 0.648931 7:-22459126 MsG0780037251.01.T01:CDS
GTCCAGAATGAAACTGCGGA+TGG 0.661750 7:+22459830 None:intergenic
GCGGATGGAATGATTACCTG+CGG 0.667272 7:+22459845 None:intergenic
ATAGAATAAGGCAATTCATG+GGG 0.677310 7:+22459762 None:intergenic
TAACGTCCAGAATGAAACTG+CGG 0.731878 7:+22459826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTCAATTTATTTTAAA+AGG - Chr7:22460116-22460135 MsG0780037251.01.T01:CDS 10.0%
!!! ACTTTCAATTTATTTTAAAA+GGG - Chr7:22460117-22460136 MsG0780037251.01.T01:CDS 10.0%
!!! AATCTGTTTTTAAATAATGC+AGG - Chr7:22459592-22459611 MsG0780037251.01.T01:CDS 20.0%
!!! ATGACATTATTCATTTTACA+TGG + Chr7:22459545-22459564 None:intergenic 20.0%
! AAGCTCAATTCTATTGATAT+GGG - Chr7:22459239-22459258 MsG0780037251.01.T01:CDS 25.0%
! AAGTTATTAGGTTTGATGAA+AGG + Chr7:22459913-22459932 None:intergenic 25.0%
! GTTCCATAATTTAACTCATT+TGG - Chr7:22459640-22459659 MsG0780037251.01.T01:CDS 25.0%
! TAAGCTCAATTCTATTGATA+TGG - Chr7:22459238-22459257 MsG0780037251.01.T01:CDS 25.0%
! TTAAGAAACAAACCTGATAA+AGG + Chr7:22459733-22459752 None:intergenic 25.0%
! TTGCAACGATATATAACATT+CGG + Chr7:22459471-22459490 None:intergenic 25.0%
!! ATTGTCATAGTATCTAAAAC+CGG + Chr7:22460013-22460032 None:intergenic 25.0%
!! ATTTATTCTGAAGAATTCAC+CGG - Chr7:22459991-22460010 MsG0780037251.01.T01:CDS 25.0%
!! TTTTAGATACTATGACAATC+TGG - Chr7:22460014-22460033 MsG0780037251.01.T01:CDS 25.0%
ACAATATATCCATGAAACCT+GGG - Chr7:22459862-22459881 MsG0780037251.01.T01:CDS 30.0%
ACGTAATGTTAGTCAAATGT+AGG + Chr7:22459310-22459329 None:intergenic 30.0%
ATAGAATAAGGCAATTCATG+GGG + Chr7:22459191-22459210 None:intergenic 30.0%
ATATGAATTAGGATATCGTC+CGG + Chr7:22458918-22458937 None:intergenic 30.0%
CGTAATGTTAGTCAAATGTA+GGG + Chr7:22459309-22459328 None:intergenic 30.0%
CTTCAATTCTTTCAAAGAGA+TGG - Chr7:22458973-22458992 MsG0780037251.01.T01:CDS 30.0%
GAGAAGAGAGAATATGAATT+AGG + Chr7:22458929-22458948 None:intergenic 30.0%
GATAGAATAAGGCAATTCAT+GGG + Chr7:22459192-22459211 None:intergenic 30.0%
GATCTCATGAATCTTATAGA+AGG - Chr7:22459344-22459363 MsG0780037251.01.T01:intron 30.0%
GCACCAAATGAGTTAAATTA+TGG + Chr7:22459646-22459665 None:intergenic 30.0%
TAAATTGCTGATCCTATCTA+CGG + Chr7:22458895-22458914 None:intergenic 30.0%
TCAAAATCTTGACCTTTATC+AGG - Chr7:22459718-22459737 MsG0780037251.01.T01:CDS 30.0%
TGAAAGAATTGAAGTGAGAA+AGG + Chr7:22458967-22458986 None:intergenic 30.0%
TGAGTTAAATTATGGAACGT+AGG + Chr7:22459638-22459657 None:intergenic 30.0%
TGCCTTTGAATACTTCAAAT+AGG + Chr7:22459394-22459413 None:intergenic 30.0%
! CACCTATTTGAAGTATTCAA+AGG - Chr7:22459389-22459408 MsG0780037251.01.T01:intron 30.0%
AGATAGGATCAGCAATTTAC+CGG - Chr7:22458896-22458915 MsG0780037251.01.T01:CDS 35.0%
AGGTGAAGATCTTCAAGAAT+TGG + Chr7:22459374-22459393 None:intergenic 35.0%
ATAATACCAGACAAGACTTG+TGG - Chr7:22459824-22459843 MsG0780037251.01.T01:CDS 35.0%
CAAAGAGATGGAAGAATCTA+TGG - Chr7:22458985-22459004 MsG0780037251.01.T01:CDS 35.0%
CACGCATAGTACAAGTTATT+AGG + Chr7:22459925-22459944 None:intergenic 35.0%
CGACTTTATGATATCGTTGT+TGG - Chr7:22459161-22459180 MsG0780037251.01.T01:intron 35.0%
GAATTGAGCTTAAGAACAAC+AGG + Chr7:22459230-22459249 None:intergenic 35.0%
GACAATATATCCATGAAACC+TGG - Chr7:22459861-22459880 MsG0780037251.01.T01:CDS 35.0%
GGATAGAATAAGGCAATTCA+TGG + Chr7:22459193-22459212 None:intergenic 35.0%
GTACAGGTAAGGATAGAATA+AGG + Chr7:22459203-22459222 None:intergenic 35.0%
TAATACCAGACAAGACTTGT+GGG - Chr7:22459825-22459844 MsG0780037251.01.T01:CDS 35.0%
TGCTCTGTTCAACATTGTTA+AGG + Chr7:22459441-22459460 None:intergenic 35.0%
! ACATAATGTGATAGCTCTGT+AGG + Chr7:22459964-22459983 None:intergenic 35.0%
! GAGGGTAATGTTACTTGAAA+AGG + Chr7:22459278-22459297 None:intergenic 35.0%
!! ATTTGGTGCTGAACTATGAT+TGG - Chr7:22459657-22459676 MsG0780037251.01.T01:CDS 35.0%
!! TTCTATTTTAGACCGTTTCC+TGG + Chr7:22460044-22460063 None:intergenic 35.0%
!! TTTGGTGCTGAACTATGATT+GGG - Chr7:22459658-22459677 MsG0780037251.01.T01:CDS 35.0%
!! TTTTAAAAGGGTAGTGTTGC+AGG - Chr7:22460129-22460148 MsG0780037251.01.T01:CDS 35.0%
!!! AAATGTAGGGTTTTGAGTGA+GGG + Chr7:22459296-22459315 None:intergenic 35.0%
!!! AGGTCAAGATTTTGAAGCTT+AGG + Chr7:22459713-22459732 None:intergenic 35.0%
!!! GATTTTGAAGCTTAGGACAA+TGG + Chr7:22459706-22459725 None:intergenic 35.0%
ACTATGCGTGACTTTGCATT+TGG - Chr7:22459935-22459954 MsG0780037251.01.T01:CDS 40.0%
GCAAAGACATTCTGTTACGA+TGG + Chr7:22458851-22458870 None:intergenic 40.0%
TAACGTCCAGAATGAAACTG+CGG + Chr7:22459127-22459146 None:intergenic 40.0%
TCGTAACAGAATGTCTTTGC+CGG - Chr7:22458851-22458870 MsG0780037251.01.T01:CDS 40.0%
TCTACGCATAAGACTATCCA+GGG - Chr7:22459511-22459530 MsG0780037251.01.T01:CDS 40.0%
TTCTACGCATAAGACTATCC+AGG - Chr7:22459510-22459529 MsG0780037251.01.T01:CDS 40.0%
TTTACATGGCATACATACCC+TGG + Chr7:22459531-22459550 None:intergenic 40.0%
! AAGAACAACAGGTGTTGTAC+AGG + Chr7:22459219-22459238 None:intergenic 40.0%
! AGCCTAGAACAAATTTTGGG+TGG + Chr7:22459889-22459908 None:intergenic 40.0%
! AGGCAGCCTAGAACAAATTT+TGG + Chr7:22459893-22459912 None:intergenic 40.0%
! GGCAGCCTAGAACAAATTTT+GGG + Chr7:22459892-22459911 None:intergenic 40.0%
! GTCTTTGGATCTAGAGTCTT+TGG + Chr7:22459042-22459061 None:intergenic 40.0%
! TGAAGTGAGAAAGGCTTGTT+TGG + Chr7:22458958-22458977 None:intergenic 40.0%
!! GCCTAGAACAAATTTTGGGT+GGG + Chr7:22459888-22459907 None:intergenic 40.0%
!! GTATTCAAAGGCACTTATGC+AGG - Chr7:22459401-22459420 MsG0780037251.01.T01:intron 40.0%
!!! CAAATGTAGGGTTTTGAGTG+AGG + Chr7:22459297-22459316 None:intergenic 40.0%
ACTTGTGGGCATGACTACTT+TGG - Chr7:22459839-22459858 MsG0780037251.01.T01:CDS 45.0%
ATGCGTGACTTTGCATTTGG+AGG - Chr7:22459938-22459957 MsG0780037251.01.T01:CDS 45.0%
GAATTCGTCGAAGCTGTCTT+TGG + Chr7:22459057-22459076 None:intergenic 45.0%
GTCTTTGCCGGAAACTTCAA+CGG - Chr7:22458863-22458882 MsG0780037251.01.T01:CDS 45.0%
TTCCATCCGCAGTTTCATTC+TGG - Chr7:22459118-22459137 MsG0780037251.01.T01:CDS 45.0%
! AGTGAGAAAGGCTTGTTTGG+TGG + Chr7:22458955-22458974 None:intergenic 45.0%
! ATCTAGAGTCTTTGGCTTCG+AGG + Chr7:22459034-22459053 None:intergenic 45.0%
! CAACAGGTGTTGTACAGGTA+AGG + Chr7:22459214-22459233 None:intergenic 45.0%
! GCCCACCCAAAATTTGTTCT+AGG - Chr7:22459884-22459903 MsG0780037251.01.T01:CDS 45.0%
! GGACAATGGAGCAGCATTTT+TGG + Chr7:22459692-22459711 None:intergenic 45.0%
! GTGAGAAAGGCTTGTTTGGT+GGG + Chr7:22458954-22458973 None:intergenic 45.0%
CAATCTGGTGCTCCAGGAAA+CGG - Chr7:22460029-22460048 MsG0780037251.01.T01:CDS 50.0%
CTATGACAATCTGGTGCTCC+AGG - Chr7:22460023-22460042 MsG0780037251.01.T01:CDS 50.0%
GCGGATGGAATGATTACCTG+CGG + Chr7:22459108-22459127 None:intergenic 50.0%
GCTTCGAGGAATTCGACATC+TGG + Chr7:22459020-22459039 None:intergenic 50.0%
GTCCAGAATGAAACTGCGGA+TGG + Chr7:22459123-22459142 None:intergenic 50.0%
TGCAGAAGCTCTCGAACATG+AGG + Chr7:22460089-22460108 None:intergenic 50.0%
TTTGCCGGAAACTTCAACGG+CGG - Chr7:22458866-22458885 MsG0780037251.01.T01:CDS 50.0%
! TCATGCCCACAAGTCTTGTC+TGG + Chr7:22459833-22459852 None:intergenic 50.0%
!! AACAAATTTTGGGTGGGCCC+AGG + Chr7:22459882-22459901 None:intergenic 50.0%
!! TCAAAGGCACTTATGCAGGC+TGG - Chr7:22459405-22459424 MsG0780037251.01.T01:intron 50.0%
GCACTTATGCAGGCTGGAAC+TGG - Chr7:22459411-22459430 MsG0780037251.01.T01:intron 55.0%
GCCACCGCCGTTGAAGTTTC+CGG + Chr7:22458873-22458892 None:intergenic 60.0%
TTGGGTGGGCCCAGGTTTCA+TGG + Chr7:22459874-22459893 None:intergenic 60.0%
CAACGGCGGTGGCCGTAGAT+AGG - Chr7:22458880-22458899 MsG0780037251.01.T01:CDS 65.0%
GCCGGAAACTTCAACGGCGG+TGG - Chr7:22458869-22458888 MsG0780037251.01.T01:CDS 65.0%
TTGCGCTCGCGAGAAACCGC+AGG - Chr7:22459089-22459108 MsG0780037251.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 22458816 22460156 22458816 ID=MsG0780037251.01;Name=MsG0780037251.01
Chr7 mRNA 22458816 22460156 22458816 ID=MsG0780037251.01.T01;Parent=MsG0780037251.01;Name=MsG0780037251.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|3|0|391
Chr7 exon 22459440 22460156 22459440 ID=MsG0780037251.01.T01:exon:4873;Parent=MsG0780037251.01.T01
Chr7 exon 22459233 22459358 22459233 ID=MsG0780037251.01.T01:exon:4874;Parent=MsG0780037251.01.T01
Chr7 exon 22458816 22459148 22458816 ID=MsG0780037251.01.T01:exon:4875;Parent=MsG0780037251.01.T01
Chr7 CDS 22459440 22460156 22459440 ID=MsG0780037251.01.T01:cds;Parent=MsG0780037251.01.T01
Chr7 CDS 22459233 22459358 22459233 ID=MsG0780037251.01.T01:cds;Parent=MsG0780037251.01.T01
Chr7 CDS 22458816 22459148 22458816 ID=MsG0780037251.01.T01:cds;Parent=MsG0780037251.01.T01
Gene Sequence

>MsG0780037251.01.T01

CTGGTCGGAAAAAACAGAAAAACAACAGATAGCCATCGTAACAGAATGTCTTTGCCGGAAACTTCAACGGCGGTGGCCGTAGATAGGATCAGCAATTTACCGGACGATATCCTAATTCATATTCTCTCTTCTCTTCCCACCAAACAAGCCTTTCTCACTTCAATTCTTTCAAAGAGATGGAAGAATCTATGGTGTTACGTTCCAGATGTCGAATTCCTCGAAGCCAAAGACTCTAGATCCAAAGACAGCTTCGACGAATTCGTTAACTACATATTGCGCTCGCGAGAAACCGCAGGTAATCATTCCATCCGCAGTTTCATTCTGGACGTTAAACATGATTCGTCTCGACTTTATGATATCGTTGTTGGTGATCCCCATGAATTGCCTTATTCTATCCTTACCTGTACAACACCTGTTGTTCTTAAGCTCAATTCTATTGATATGGGTGACAACTTTTCTCCTTTTCAAGTAACATTACCCTCACTCAAAACCCTACATTTGACTAACATTACGTTTGAACAAGACGATGATCTCATGAATCTTATAGAAGGATGTCCAATTCTTGAAGATCTTCACCTATTTGAAGTATTCAAAGGCACTTATGCAGGCTGGAACTGGAAAACCTTAACAATGTTGAACAGAGCAGATGTTACCGAATGTTATATATCGTTGCAAGCAATTTCAAATGTCGAGTTTCTACGCATAAGACTATCCAGGGCTTGTCAAGATTGTCACTTTCCTACGTTCCATAATTTAACTCATTTGGTGCTGAACTATGATTGGGATACAGTTCCAAAAATGCTGCTCCATTGTCCTAAGCTTCAAAATCTTGACCTTTATCAGATAATACCAGACAAGACTTGTGGGCATGACTACTTTGGACAATATATCCATGAAACCTGGGCCCACCCAAAATTTGTTCTAGGCTGCCTTTCATCAAACCTAATAACTTGTACTATGCGTGACTTTGCATTTGGAGGCCTACAGAGCTATCACATTATGTTAGCAGAATTTATTCTGAAGAATTCACCGGTTTTAGATACTATGACAATCTGGTGCTCCAGGAAACGGTCTAAAATAGAAAGACGATTAATTAAGAGACTGACCTCATGTTCGAGAGCTTCTGCAACTTGTCAACTTTCAATTTATTTTAAAAGGGTAGTGTTGCAGGCATAA

Protein sequence

>MsG0780037251.01.T01

LVGKNRKTTDSHRNRMSLPETSTAVAVDRISNLPDDILIHILSSLPTKQAFLTSILSKRWKNLWCYVPDVEFLEAKDSRSKDSFDEFVNYILRSRETAGNHSIRSFILDVKHDSSRLYDIVVGDPHELPYSILTCTTPVVLKLNSIDMGDNFSPFQVTLPSLKTLHLTNITFEQDDDLMNLIEGCPILEDLHLFEVFKGTYAGWNWKTLTMLNRADVTECYISLQAISNVEFLRIRLSRACQDCHFPTFHNLTHLVLNYDWDTVPKMLLHCPKLQNLDLYQIIPDKTCGHDYFGQYIHETWAHPKFVLGCLSSNLITCTMRDFAFGGLQSYHIMLAEFILKNSPVLDTMTIWCSRKRSKIERRLIKRLTSCSRASATCQLSIYFKRVVLQA*