AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037688.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037688.01.T01 MTR_5g018790 61.290 217 30 3 219 385 1 213 6.22e-73 241
MsG0780037688.01.T01 MTR_2g105460 63.889 180 32 2 239 385 137 316 2.19e-63 213
MsG0780037688.01.T01 MTR_4g119600 60.894 179 22 3 198 332 138 312 2.55e-60 198
MsG0780037688.01.T01 MTR_8g103800 60.335 179 23 3 198 332 108 282 1.33e-59 195
MsG0780037688.01.T01 MTR_8g107490 61.842 152 28 2 198 319 117 268 2.86e-53 179
MsG0780037688.01.T01 MTR_1g052890 59.615 156 22 1 204 318 11 166 1.94e-52 177
MsG0780037688.01.T01 MTR_8g020433 59.091 154 25 1 204 319 98 251 3.73e-50 175
MsG0780037688.01.T01 MTR_7g007340 47.137 227 78 6 4 196 5 223 3.41e-49 170
MsG0780037688.01.T01 MTR_7g007370 49.083 218 80 7 1 196 1 209 3.78e-49 169
MsG0780037688.01.T01 MTR_3g099830 43.882 237 84 7 1 194 1 231 2.18e-43 155
MsG0780037688.01.T01 MTR_8g037210 48.101 158 49 2 210 334 1 158 3.58e-42 148
MsG0780037688.01.T01 MTR_2g096070 69.912 113 28 2 242 354 200 306 3.98e-42 157
MsG0780037688.01.T01 MTR_7g033470 80.682 88 15 1 1 86 1 88 6.86e-41 141
MsG0780037688.01.T01 MTR_2g007360 42.609 230 96 7 1 196 1 228 6.85e-39 143
MsG0780037688.01.T01 MTR_4g057300 38.000 200 82 3 193 351 34 232 5.92e-31 121
MsG0780037688.01.T01 MTR_2g007090 45.652 184 68 5 1 177 1 159 1.17e-29 116
MsG0780037688.01.T01 MTR_6g026910 58.947 95 35 1 238 332 139 229 2.86e-29 114
MsG0780037688.01.T01 MTR_2g008310 35.656 244 95 5 11 196 1 240 3.59e-29 117
MsG0780037688.01.T01 MTR_2g008320 35.857 251 99 7 6 196 46 294 2.54e-28 115
MsG0780037688.01.T01 MTR_4g132765 42.857 133 47 1 215 318 306 438 1.80e-27 115
MsG0780037688.01.T01 MTR_7g065910 41.772 158 54 4 208 332 82 234 7.32e-26 107
MsG0780037688.01.T01 MTR_4g033320 57.143 77 33 0 242 318 22 98 1.78e-25 100
MsG0780037688.01.T01 MTR_3g107160 31.405 242 107 5 12 196 10 249 1.24e-23 101
MsG0780037688.01.T01 MTR_8g028020 40.152 132 38 2 210 300 1 132 8.44e-23 93.2
MsG0780037688.01.T01 MTR_2g007400 58.824 85 34 1 1 85 1 84 1.39e-22 99.0
MsG0780037688.01.T01 MTR_2g007400 52.747 91 36 2 110 194 172 261 4.07e-16 79.7
MsG0780037688.01.T01 MTR_2g007500 35.945 217 92 7 7 177 9 224 2.13e-22 97.4
MsG0780037688.01.T01 MTR_3g107100 33.610 241 98 9 12 194 11 247 1.87e-21 95.5
MsG0780037688.01.T01 MTR_7g010970 37.681 138 64 4 208 333 50 177 3.11e-21 91.7
MsG0780037688.01.T01 MTR_5g046245 41.722 151 22 3 208 315 21 148 1.05e-20 90.5
MsG0780037688.01.T01 MTR_5g046245 69.565 46 11 1 197 239 151 196 6.36e-13 68.2
MsG0780037688.01.T01 MTR_0632s0010 39.062 128 37 2 219 305 5 132 1.46e-20 87.0
MsG0780037688.01.T01 MTR_5g032220 42.157 102 53 1 242 343 224 319 6.02e-20 91.7
MsG0780037688.01.T01 MTR_0156s0040 37.209 129 40 2 208 295 50 178 5.96e-19 84.3
MsG0780037688.01.T01 MTR_3g107120 29.644 253 114 5 8 196 5 257 8.19e-19 87.8
MsG0780037688.01.T01 MTR_2g030885 85.714 49 7 0 337 385 149 197 9.59e-19 88.2
MsG0780037688.01.T01 MTR_2g007450 41.732 127 62 3 6 122 10 134 1.31e-18 87.4
MsG0780037688.01.T01 MTR_1g041245 33.200 250 104 8 1 195 1 242 2.25e-18 86.3
MsG0780037688.01.T01 MTR_7g056020 33.333 144 55 2 213 315 460 603 2.36e-18 87.4
MsG0780037688.01.T01 MTR_5g073420 31.224 237 107 6 9 194 8 239 3.47e-18 85.9
MsG0780037688.01.T01 MTR_2g005990 55.128 78 32 2 8 84 2 77 3.69e-18 85.9
MsG0780037688.01.T01 MTR_2g005990 45.833 96 47 3 104 194 158 253 4.74e-13 70.5
MsG0780037688.01.T01 MTR_7g056277 31.405 242 98 10 12 193 259 492 7.54e-18 85.9
MsG0780037688.01.T01 MTR_7g056287 31.667 240 96 10 12 191 3 234 8.48e-18 84.3
MsG0780037688.01.T01 MTR_1g099140 27.523 218 98 5 208 370 177 389 1.30e-17 84.7
MsG0780037688.01.T01 MTR_3g015530 44.737 114 47 3 208 318 141 241 5.00e-17 80.5
MsG0780037688.01.T01 MTR_2g023130 30.065 153 66 1 204 315 71 223 6.65e-17 79.3
MsG0780037688.01.T01 MTR_1g108800 33.180 217 115 8 11 205 7 215 9.40e-17 80.9
MsG0780037688.01.T01 MTR_7g098510 31.301 246 109 8 10 202 16 254 1.29e-16 81.3
MsG0780037688.01.T01 MTR_7g098570 30.233 258 104 8 1 193 2 248 5.09e-16 79.7
MsG0780037688.01.T01 MTR_5g045170 29.572 257 126 9 2 208 4 255 8.96e-16 78.6
MsG0780037688.01.T01 MTR_4g113170 33.333 189 99 5 203 385 83 250 9.50e-16 79.3
MsG0780037688.01.T01 MTR_5g073000 27.347 245 96 7 208 370 123 367 9.86e-16 79.3
MsG0780037688.01.T01 MTR_5g046160 34.959 123 52 4 205 300 128 249 5.10e-15 74.7
MsG0780037688.01.T01 MTR_2g007460 42.574 101 39 4 1 100 1 83 5.43e-15 71.2
MsG0780037688.01.T01 MTR_5g072950 27.155 232 95 7 176 370 53 247 8.46e-15 75.1
MsG0780037688.01.T01 MTR_5g058350 33.333 168 87 5 8 152 4 169 1.25e-14 72.0
MsG0780037688.01.T01 MTR_1g071020 35.036 137 57 3 219 328 1 132 1.50e-14 71.6
MsG0780037688.01.T01 MTR_5g413325 73.469 49 13 0 337 385 31 79 4.99e-14 73.9
MsG0780037688.01.T01 MTR_1g098990 96.970 33 1 0 207 239 119 151 7.59e-14 71.6
MsG0780037688.01.T01 MTR_5g083890 56.757 74 29 2 12 84 6 77 8.02e-14 73.2
MsG0780037688.01.T01 MTR_3g108150 31.557 244 105 10 4 194 5 239 8.64e-14 72.8
MsG0780037688.01.T01 MTR_3g467720 93.939 33 2 0 207 239 70 102 1.19e-13 68.2
MsG0780037688.01.T01 MTR_5g031650 77.778 45 7 1 198 239 160 204 1.47e-13 70.1
MsG0780037688.01.T01 MTR_3g067290 77.778 45 7 1 198 239 140 184 1.75e-13 69.7
MsG0780037688.01.T01 MTR_2g007100 66.667 45 15 0 11 55 1 45 2.02e-13 65.5
MsG0780037688.01.T01 MTR_6g042630 58.929 56 22 1 264 318 21 76 2.85e-13 65.1
MsG0780037688.01.T01 MTR_7g032380 34.536 194 72 8 3 145 2 191 3.05e-13 70.9
MsG0780037688.01.T01 MTR_8g009330 75.556 45 8 1 198 239 159 203 3.86e-13 68.9
MsG0780037688.01.T01 MTR_7g075820 47.059 85 41 3 12 95 6 87 5.03e-13 70.5
MsG0780037688.01.T01 MTR_1g077420 39.130 115 55 3 12 115 4 114 5.69e-13 68.9
MsG0780037688.01.T01 MTR_3g026920 44.444 81 44 1 6 86 13 92 5.77e-13 70.1
MsG0780037688.01.T01 MTR_2g007530 44.444 81 44 1 6 86 13 92 8.95e-13 69.3
MsG0780037688.01.T01 MTR_6g075990 77.778 45 7 1 198 239 156 200 1.02e-12 68.2
MsG0780037688.01.T01 MTR_7g098590 50.000 74 33 1 10 83 16 85 1.53e-12 64.7
MsG0780037688.01.T01 MTR_7g034110 48.780 82 38 2 3 84 2 79 2.25e-12 68.2
MsG0780037688.01.T01 MTR_2g103680 58.182 55 20 1 1 55 1 52 2.91e-12 63.9
MsG0780037688.01.T01 MTR_7g033945 48.148 81 38 3 3 83 2 78 3.40e-12 65.1
MsG0780037688.01.T01 MTR_4g098590 45.833 72 38 1 14 85 1 71 3.85e-12 67.4
MsG0780037688.01.T01 MTR_1g492880 48.052 77 38 1 10 86 4 78 4.44e-12 62.4
MsG0780037688.01.T01 MTR_1g492880 48.052 77 38 1 10 86 4 78 4.47e-12 62.8
MsG0780037688.01.T01 MTR_1g081010 78.571 42 7 1 337 378 18 57 4.54e-12 67.0
MsG0780037688.01.T01 MTR_7g033915 31.356 236 108 10 3 194 2 227 5.23e-12 67.0
MsG0780037688.01.T01 MTR_7g007080 29.555 247 107 7 9 193 1 242 5.32e-12 67.0
MsG0780037688.01.T01 MTR_8g014180 63.636 44 16 0 5 48 10 53 5.78e-12 60.8
MsG0780037688.01.T01 MTR_2g007550 43.750 80 44 1 7 86 9 87 5.93e-12 66.6
MsG0780037688.01.T01 MTR_7g033990 49.398 83 37 3 1 83 1 78 5.93e-12 67.0
MsG0780037688.01.T01 MTR_1g107385 50.000 78 35 3 12 87 32 107 1.05e-11 66.2
MsG0780037688.01.T01 MTR_6g022390 51.562 64 31 0 11 74 4 67 1.41e-11 62.4
MsG0780037688.01.T01 MTR_5g082930 42.254 71 40 1 14 84 17 86 1.45e-11 63.9
MsG0780037688.01.T01 MTR_8g085430 55.072 69 27 2 11 79 10 74 1.52e-11 65.5
MsG0780037688.01.T01 MTR_1g053025 44.565 92 41 3 11 101 1 83 1.60e-11 65.9
MsG0780037688.01.T01 MTR_3g040700 29.016 193 88 4 2 145 33 225 1.76e-11 65.9
MsG0780037688.01.T01 MTR_3g114200 49.367 79 25 3 9 81 16 85 1.80e-11 62.4
MsG0780037688.01.T01 MTR_1g015680 74.359 39 10 0 347 385 1 39 1.83e-11 65.9
MsG0780037688.01.T01 MTR_1g038710 29.596 223 93 7 7 172 14 229 2.15e-11 65.5
MsG0780037688.01.T01 MTR_3g023470 66.667 45 15 0 12 56 15 59 2.67e-11 65.1
MsG0780037688.01.T01 MTR_0116s0050 87.879 33 4 0 207 239 97 129 2.68e-11 62.4
MsG0780037688.01.T01 MTR_3g023630 29.614 233 108 7 12 193 8 235 3.35e-11 64.7
MsG0780037688.01.T01 MTR_8g095070 84.848 33 5 0 241 273 193 225 3.94e-11 63.2
MsG0780037688.01.T01 MTR_7g056280 47.887 71 36 1 14 84 8 77 4.11e-11 65.1
MsG0780037688.01.T01 MTR_3g036330 48.000 75 38 1 12 85 11 85 4.92e-11 63.9
MsG0780037688.01.T01 MTR_1g043340 76.471 34 8 0 206 239 1 34 5.12e-11 59.7
MsG0780037688.01.T01 MTR_7g056433 29.091 220 95 7 12 174 12 227 5.50e-11 63.9
MsG0780037688.01.T01 MTR_2g082800 30.857 175 102 6 1 167 16 179 6.17e-11 63.9
MsG0780037688.01.T01 MTR_6g018560 46.667 60 32 0 12 71 34 93 6.18e-11 63.9
MsG0780037688.01.T01 MTR_7g056430 36.478 159 70 8 12 145 9 161 6.38e-11 64.7
MsG0780037688.01.T01 MTR_7g056420 35.802 162 67 8 12 145 9 161 6.54e-11 64.7
MsG0780037688.01.T01 MTR_6g018570 46.667 60 32 0 12 71 34 93 6.71e-11 63.9
MsG0780037688.01.T01 MTR_2g020170 44.872 78 40 2 10 86 20 95 7.24e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037688.01.T01 AT3G52680 30.986 213 92 6 12 174 21 228 7.85e-17 81.6
MsG0780037688.01.T01 AT3G52680 31.455 213 91 6 12 174 21 228 1.12e-16 81.6
MsG0780037688.01.T01 AT4G26340 31.390 223 94 7 11 179 1 218 7.68e-16 79.0
MsG0780037688.01.T01 AT5G60610 31.844 179 80 5 11 147 1 179 6.74e-15 75.9
MsG0780037688.01.T01 AT5G60610 31.844 179 80 5 11 147 1 179 6.74e-15 75.9
MsG0780037688.01.T01 AT2G04230 27.459 244 116 6 5 191 6 245 4.71e-14 73.9
MsG0780037688.01.T01 AT4G00315 30.319 188 80 5 11 147 1 188 1.41e-13 72.4
MsG0780037688.01.T01 AT1G16930 29.442 197 93 6 12 163 15 210 1.72e-13 72.0
MsG0780037688.01.T01 AT1G16930 29.442 197 93 6 12 163 15 210 1.72e-13 72.0
MsG0780037688.01.T01 AT1G16930 29.442 197 93 6 12 163 15 210 1.72e-13 72.0
MsG0780037688.01.T01 AT4G00160 28.169 213 100 5 12 174 16 225 3.02e-13 71.2
MsG0780037688.01.T01 AT1G19070 48.101 79 39 2 11 88 1 78 5.97e-13 64.3
MsG0780037688.01.T01 AT3G49030 45.570 79 40 1 8 86 17 92 6.89e-13 70.1
MsG0780037688.01.T01 AT3G49030 28.837 215 99 6 8 171 17 228 7.25e-13 70.1
MsG0780037688.01.T01 AT1G78750 26.667 255 123 7 10 203 16 267 1.99e-12 68.9
MsG0780037688.01.T01 AT1G78750 26.667 255 123 7 10 203 16 267 1.99e-12 68.9
MsG0780037688.01.T01 AT3G26922 28.796 191 85 6 9 151 11 198 2.68e-12 67.4
MsG0780037688.01.T01 AT3G26922 28.796 191 85 6 9 151 11 198 2.68e-12 67.4
MsG0780037688.01.T01 AT1G80470 29.319 191 88 4 10 153 13 203 4.29e-12 67.8
MsG0780037688.01.T01 AT4G14103 30.806 211 90 6 12 168 8 216 5.75e-12 67.4
MsG0780037688.01.T01 AT4G14103 30.806 211 90 6 12 168 8 216 6.00e-12 67.0
MsG0780037688.01.T01 AT4G14103 30.806 211 90 6 12 168 8 216 6.00e-12 67.0
MsG0780037688.01.T01 AT5G56420 32.418 182 77 6 12 147 6 187 9.74e-12 66.6
MsG0780037688.01.T01 AT5G56420 32.418 182 77 6 12 147 6 187 9.74e-12 66.6
MsG0780037688.01.T01 AT5G56420 32.418 182 77 6 12 147 6 187 9.74e-12 66.6
MsG0780037688.01.T01 AT3G58880 31.364 220 93 8 11 173 2 220 1.42e-11 66.2
MsG0780037688.01.T01 AT4G13985 34.921 126 75 2 3 121 10 135 1.44e-11 66.2
MsG0780037688.01.T01 AT4G14096 30.918 207 91 6 12 167 8 213 2.44e-11 65.5
MsG0780037688.01.T01 AT4G14096 30.918 207 91 6 12 167 8 213 2.44e-11 65.5
MsG0780037688.01.T01 AT3G59200 29.954 217 93 7 9 170 4 216 3.13e-11 64.7
MsG0780037688.01.T01 AT1G67390 40.217 92 52 1 12 103 41 129 3.29e-11 65.1
MsG0780037688.01.T01 AT4G13960 50.794 63 30 1 11 72 1 63 3.46e-11 65.1
MsG0780037688.01.T01 AT4G13960 50.794 63 30 1 11 72 1 63 3.46e-11 65.1
MsG0780037688.01.T01 AT3G59200 29.493 217 94 7 9 170 4 216 4.40e-11 64.7
MsG0780037688.01.T01 AT5G56370 35.484 124 48 2 11 134 1 92 7.04e-11 63.5
MsG0780037688.01.T01 AT1G69630 25.101 247 132 6 10 204 16 261 7.60e-11 63.9
MsG0780037688.01.T01 AT5G56370 35.484 124 48 2 11 134 1 92 9.09e-11 63.5
MsG0780037688.01.T01 AT5G56370 35.484 124 48 2 11 134 1 92 9.09e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTCCACCGTTGAAGTTTC+CGG 0.247325 7:+31019409 None:intergenic
CATTCTTGCCGGTAGATTAA+AGG 0.261935 7:-31016712 MsG0780037688.01.T01:CDS
ATGAAACTGTGATACATAAT+TGG 0.284358 7:+31019135 None:intergenic
AGTAGAAGATCTTCAAGATT+TGG 0.289503 7:+31018895 None:intergenic
CGAATTCGTTTACTCAGTTT+TGG 0.293813 7:-31019203 MsG0780037688.01.T01:CDS
CAATTCATACCATAACTTTC+GGG 0.306294 7:+31016146 None:intergenic
ATGGGATTGAACATTCTTAA+TGG 0.306492 7:-31016774 MsG0780037688.01.T01:CDS
ATACAATCGAAGATATCTTT+TGG 0.311550 7:-31016455 MsG0780037688.01.T01:CDS
GTAAACGAATTCGTCGAATA+AGG 0.319372 7:+31019213 None:intergenic
ACAATTCATACCATAACTTT+CGG 0.321959 7:+31016145 None:intergenic
CAAAGAGATGGAAGAATCTA+TGG 0.342026 7:-31019297 MsG0780037688.01.T01:CDS
TAAGGTTTCAGCACATACTA+TGG 0.348007 7:+31018843 None:intergenic
GTGAAGAGAGAATGTGAATC+AGG 0.361336 7:+31019356 None:intergenic
TTTGAGTGAGGGTAATGTTA+TGG 0.364032 7:+31018984 None:intergenic
TGCCAATGTTTGAGGTAGTT+GGG 0.380032 7:-31016347 MsG0780037688.01.T01:CDS
TGAAGTGAGAAAGGCTTGTT+TGG 0.387146 7:+31019327 None:intergenic
AAAATTGTTAAACAACTTAA+CGG 0.391044 7:+31016419 None:intergenic
GCGATGGAGCCGGCTTTAGA+AGG 0.393797 7:-31016738 MsG0780037688.01.T01:CDS
ATGCCAATGTTTGAGGTAGT+TGG 0.398658 7:-31016348 MsG0780037688.01.T01:CDS
TTAGAAGGACACATTCTTGC+CGG 0.400329 7:-31016723 MsG0780037688.01.T01:CDS
CTTCAATTCTTTCAAAGAGA+TGG 0.401205 7:-31019309 MsG0780037688.01.T01:CDS
ATGGTGTTACGTTCCAGATC+TGG 0.412116 7:-31019278 MsG0780037688.01.T01:CDS
CTTCAACGGTGGAGGTAGAT+AGG 0.415600 7:-31019402 MsG0780037688.01.T01:CDS
TGAAAGAATTGAAGTGAGAA+AGG 0.416065 7:+31019318 None:intergenic
TTAAACAACTTAACGGATGT+TGG 0.423441 7:+31016426 None:intergenic
GTTATATGCAAATGCATTAG+TGG 0.439090 7:-31015970 MsG0780037688.01.T01:CDS
GTATAAGATGCCAATGTTTG+AGG 0.439507 7:-31016355 MsG0780037688.01.T01:CDS
GCATTTGAAACTATTTCCAT+TGG 0.440172 7:+31018775 None:intergenic
CATTAAACTCCTCACCCATA+TGG 0.442964 7:+31019007 None:intergenic
GTCATCCTCCTTTAATCTAC+CGG 0.444072 7:+31016704 None:intergenic
CATGAGGGCATGGAAAGATA+TGG 0.449024 7:-31016012 MsG0780037688.01.T01:CDS
ACGAATTCTAATTCCAGATC+TGG 0.451463 7:+31019265 None:intergenic
AGCGAATGTATTTCAAATGT+AGG 0.453780 7:+31018959 None:intergenic
CATTGGCATCTTATACAAGT+TGG 0.454476 7:+31016362 None:intergenic
GCGAATGTATTTCAAATGTA+GGG 0.462171 7:+31018960 None:intergenic
GATTTGGACAATTATCTGTA+AGG 0.470965 7:+31018911 None:intergenic
GTGTTTGCCTTCTTCCGCTT+CGG 0.474276 7:+31019237 None:intergenic
ATATCTAATCTCGAAGTTGA+AGG 0.479747 7:-31016520 MsG0780037688.01.T01:CDS
AAGTACGCAAACAAAGGAAT+GGG 0.483121 7:-31016792 MsG0780037688.01.T01:CDS
TTTCAAATGCGGAGTTTCTA+CGG 0.486668 7:-31018762 MsG0780037688.01.T01:CDS
GGAAATCACTACAAGCATCT+TGG 0.507979 7:+31015943 None:intergenic
ATGGCATAGGCTAGGAAAGG+TGG 0.518084 7:+31015921 None:intergenic
AAAGTACGCAAACAAAGGAA+TGG 0.518682 7:-31016793 MsG0780037688.01.T01:CDS
AAAATATGGAAGGAAAATAG+AGG 0.528071 7:-31016561 MsG0780037688.01.T01:intron
GTGAGAAAGGCTTGTTTGGT+GGG 0.528660 7:+31019331 None:intergenic
GCGAGAAGCTGGGGTAAGAA+AGG 0.536245 7:-31019176 MsG0780037688.01.T01:CDS
GTCGACGCCGAAGCGGAAGA+AGG 0.540312 7:-31019244 MsG0780037688.01.T01:CDS
GCCGGAAACTTCAACGGTGG+AGG 0.541239 7:-31019410 MsG0780037688.01.T01:CDS
ACCCCAACTACCTCAAACAT+TGG 0.542278 7:+31016345 None:intergenic
CATTCAAGGGGTCATGGCAT+AGG 0.543369 7:+31015908 None:intergenic
TCACAACCATGCGATGGAGC+CGG 0.543669 7:-31016748 MsG0780037688.01.T01:CDS
TTCGCCGGAAACTTCAACGG+TGG 0.546369 7:-31019413 MsG0780037688.01.T01:CDS
ATGTGAATCAGGATATCGTC+TGG 0.546750 7:+31019367 None:intergenic
TTGTGATTTCTATATTCCAA+TGG 0.547496 7:-31018791 MsG0780037688.01.T01:CDS
GTGATTGTTACCGACAGAGA+TGG 0.550691 7:-31016199 MsG0780037688.01.T01:CDS
TCACTTCATTCAAGGGGTCA+TGG 0.551524 7:+31015902 None:intergenic
AGTGAGAAAGGCTTGTTTGG+TGG 0.554557 7:+31019330 None:intergenic
GCCAATGTTTGAGGTAGTTG+GGG 0.555253 7:-31016346 MsG0780037688.01.T01:intron
CTAAAGCCGGCTCCATCGCA+TGG 0.558703 7:+31016742 None:intergenic
AGAATGTGTCCTTCTAAAGC+CGG 0.567631 7:+31016729 None:intergenic
GTCTTCGCCGGAAACTTCAA+CGG 0.571155 7:-31019416 MsG0780037688.01.T01:CDS
TCTCCTTCACTTCATTCAAG+GGG 0.573655 7:+31015896 None:intergenic
TCAAGAAGATCATGAGGGCA+TGG 0.575177 7:-31016022 MsG0780037688.01.T01:CDS
GAAGCTGGGGTAAGAAAGGA+AGG 0.575435 7:-31019172 MsG0780037688.01.T01:CDS
GGGTCTTTGATGAAAGCGGT+TGG 0.575473 7:-31016178 MsG0780037688.01.T01:CDS
AAGGGGTCATGGCATAGGCT+AGG 0.587677 7:+31015913 None:intergenic
TGATTGTTACCGACAGAGAT+GGG 0.590639 7:-31016198 MsG0780037688.01.T01:CDS
TTCGAGATTAGATATTGCAA+CGG 0.592456 7:+31016528 None:intergenic
TGGCATAGGCTAGGAAAGGT+GGG 0.600860 7:+31015922 None:intergenic
AGAATTCGTCGACGCCGAAG+CGG 0.604213 7:-31019251 MsG0780037688.01.T01:CDS
TTTGGTCTCGCGAGAAGCTG+GGG 0.607446 7:-31019185 MsG0780037688.01.T01:CDS
CATCAAAGACCCATCTCTGT+CGG 0.607523 7:+31016189 None:intergenic
AGATGGGTCTTTGATGAAAG+CGG 0.608920 7:-31016182 MsG0780037688.01.T01:CDS
GTCATGGCATAGGCTAGGAA+AGG 0.611073 7:+31015918 None:intergenic
TGGAGTTCACAACCATGCGA+TGG 0.616718 7:-31016754 MsG0780037688.01.T01:CDS
CCGTAACAGAATGTCTTCGC+CGG 0.616786 7:-31019428 None:intergenic
AATGGAAATAGTTTCAAATG+CGG 0.617290 7:-31018773 MsG0780037688.01.T01:CDS
ATGTTGTCAAGAAGATCATG+AGG 0.641981 7:-31016028 MsG0780037688.01.T01:CDS
TCTTGCCGGTAGATTAAAGG+AGG 0.642088 7:-31016709 MsG0780037688.01.T01:CDS
ACTTATTACTCAAGAACACA+TGG 0.643139 7:-31016486 MsG0780037688.01.T01:CDS
GAGTCCATAACCAAAACCGT+TGG 0.646034 7:+31016396 None:intergenic
ATTTGCATATAACTCTTGAG+TGG 0.648884 7:+31015980 None:intergenic
ATATCAAAGTACGCAAACAA+AGG 0.650764 7:-31016798 MsG0780037688.01.T01:CDS
TCTACGGATAAAACTACACA+AGG 0.673067 7:-31018746 MsG0780037688.01.T01:intron
TGTTGTCAAGAAGATCATGA+GGG 0.724422 7:-31016027 MsG0780037688.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATAAATATTTTAT+CGG - Chr7:31017409-31017428 MsG0780037688.01.T01:intron 0.0%
!! GAAAAAAAAATTTGAAAAAA+TGG + Chr7:31018016-31018035 None:intergenic 10.0%
!!! TTATTTTTTTATTATGCAAT+GGG - Chr7:31017838-31017857 MsG0780037688.01.T01:intron 10.0%
!! AAAATTGTTAAACAACTTAA+CGG + Chr7:31018913-31018932 None:intergenic 15.0%
!!! GTTATTTTTTTATTATGCAA+TGG - Chr7:31017837-31017856 MsG0780037688.01.T01:intron 15.0%
!!! TTTTTTGTTTTAGTTCATTA+TGG - Chr7:31018053-31018072 MsG0780037688.01.T01:intron 15.0%
!! ATATATGATTATGTAAGTAG+TGG - Chr7:31017217-31017236 MsG0780037688.01.T01:intron 20.0%
!! ATTGAAAAAAATGTTGGATT+TGG + Chr7:31017728-31017747 None:intergenic 20.0%
!! GATTTCATTGAAAAAAATGT+TGG + Chr7:31017734-31017753 None:intergenic 20.0%
!! TTAGATTGTAAATATCCTAT+GGG - Chr7:31019246-31019265 MsG0780037688.01.T01:CDS 20.0%
!! TTGAAAAAAATGTTGGATTT+GGG + Chr7:31017727-31017746 None:intergenic 20.0%
!!! AAAATTTTGGAACGAAAAAA+TGG - Chr7:31017981-31018000 MsG0780037688.01.T01:intron 20.0%
!!! TCTCTTTTTAAATATTGTAG+TGG - Chr7:31016678-31016697 MsG0780037688.01.T01:intron 20.0%
! AAAATATGGAAGGAAAATAG+AGG - Chr7:31018768-31018787 MsG0780037688.01.T01:CDS 25.0%
! AATGGAAATAGTTTCAAATG+CGG - Chr7:31016556-31016575 MsG0780037688.01.T01:intron 25.0%
! ACAATGAACGTCAAAAAATA+TGG - Chr7:31018754-31018773 MsG0780037688.01.T01:CDS 25.0%
! ACAATTCATACCATAACTTT+CGG + Chr7:31019187-31019206 None:intergenic 25.0%
! ACATGTAAGTAAGAAAAGAA+AGG + Chr7:31016864-31016883 None:intergenic 25.0%
! ATGAAACTGTGATACATAAT+TGG + Chr7:31016197-31016216 None:intergenic 25.0%
! ATTCCATAATTTGACTCATT+TGG - Chr7:31016726-31016745 MsG0780037688.01.T01:CDS 25.0%
! CAAGTGTATCAAATATTTCT+TGG + Chr7:31018690-31018709 None:intergenic 25.0%
! CTTAGATTGTAAATATCCTA+TGG - Chr7:31019245-31019264 MsG0780037688.01.T01:CDS 25.0%
! TAAATATCCTATGGGAAAAA+AGG - Chr7:31019254-31019273 MsG0780037688.01.T01:CDS 25.0%
! TATTATTAACAGCACATAGA+AGG - Chr7:31016905-31016924 MsG0780037688.01.T01:intron 25.0%
! TTGTGATTTCTATATTCCAA+TGG - Chr7:31016538-31016557 MsG0780037688.01.T01:CDS 25.0%
!! ACTTTTGACGTAAAAAAAAC+AGG - Chr7:31017797-31017816 MsG0780037688.01.T01:intron 25.0%
!! ATACAATCGAAGATATCTTT+TGG - Chr7:31018874-31018893 MsG0780037688.01.T01:CDS 25.0%
!! GTTGTTTAACAATTTTCCAA+CGG - Chr7:31018917-31018936 MsG0780037688.01.T01:CDS 25.0%
!! TACAATCGAAGATATCTTTT+GGG - Chr7:31018875-31018894 MsG0780037688.01.T01:CDS 25.0%
!! TACTCTTTTCAACTTTGTTA+AGG + Chr7:31016507-31016526 None:intergenic 25.0%
!!! CACACATTATTGATTTTCAA+TGG + Chr7:31016640-31016659 None:intergenic 25.0%
!!! TGTTTTTTTTACGTCAAAAG+TGG + Chr7:31017798-31017817 None:intergenic 25.0%
!!! TTTTAGAAACTATGTCAATC+TGG - Chr7:31017106-31017125 MsG0780037688.01.T01:intron 25.0%
AAAAAAATGTTGGATTTGGG+TGG + Chr7:31017724-31017743 None:intergenic 30.0%
AAGATAGAGAAGAATTGCTT+GGG - Chr7:31018330-31018349 MsG0780037688.01.T01:intron 30.0%
ACTTATTACTCAAGAACACA+TGG - Chr7:31018843-31018862 MsG0780037688.01.T01:CDS 30.0%
AGATGATGAAAATAGTGTGT+AGG + Chr7:31017681-31017700 None:intergenic 30.0%
AGCGAATGTATTTCAAATGT+AGG + Chr7:31016373-31016392 None:intergenic 30.0%
AGTAGAAGATCTTCAAGATT+TGG + Chr7:31016437-31016456 None:intergenic 30.0%
ATATCAAAGTACGCAAACAA+AGG - Chr7:31018531-31018550 MsG0780037688.01.T01:intron 30.0%
ATATCTAATCTCGAAGTTGA+AGG - Chr7:31018809-31018828 MsG0780037688.01.T01:CDS 30.0%
ATGATGAAAATAGTGTGTAG+GGG + Chr7:31017679-31017698 None:intergenic 30.0%
ATGGGATTGAACATTCTTAA+TGG - Chr7:31018555-31018574 MsG0780037688.01.T01:intron 30.0%
ATTTGCATATAACTCTTGAG+TGG + Chr7:31019352-31019371 None:intergenic 30.0%
CAATTCATACCATAACTTTC+GGG + Chr7:31019186-31019205 None:intergenic 30.0%
CTTCAATTCTTTCAAAGAGA+TGG - Chr7:31016020-31016039 MsG0780037688.01.T01:CDS 30.0%
GATGATGAAAATAGTGTGTA+GGG + Chr7:31017680-31017699 None:intergenic 30.0%
GATTTGGACAATTATCTGTA+AGG + Chr7:31016421-31016440 None:intergenic 30.0%
GCGAATGTATTTCAAATGTA+GGG + Chr7:31016372-31016391 None:intergenic 30.0%
GTCAAATTATGGAATGTAGA+AGG + Chr7:31016721-31016740 None:intergenic 30.0%
GTTATATGCAAATGCATTAG+TGG - Chr7:31019359-31019378 MsG0780037688.01.T01:CDS 30.0%
TAATTAATTCCGATACTTCG+TGG + Chr7:31017386-31017405 None:intergenic 30.0%
TGAAAGAATTGAAGTGAGAA+AGG + Chr7:31016014-31016033 None:intergenic 30.0%
TGAACGTCAAAAAATATGGA+AGG - Chr7:31018758-31018777 MsG0780037688.01.T01:CDS 30.0%
TGCAAGCAAATGTTAAACAA+AGG - Chr7:31019217-31019236 MsG0780037688.01.T01:CDS 30.0%
TTCAAAGATGAATATGCCTA+AGG - Chr7:31019108-31019127 MsG0780037688.01.T01:intron 30.0%
TTCGAGATTAGATATTGCAA+CGG + Chr7:31018804-31018823 None:intergenic 30.0%
TTGCTAAACAAACCTGAAAA+AGG + Chr7:31016818-31016837 None:intergenic 30.0%
! AATTGTTTTCCCGAAAGTTA+TGG - Chr7:31019174-31019193 MsG0780037688.01.T01:CDS 30.0%
! AGAAAGAGGAAAACTTGTTT+GGG - Chr7:31019057-31019076 MsG0780037688.01.T01:intron 30.0%
! CGTAATTTTGTCCAAATTTC+CGG - Chr7:31018175-31018194 MsG0780037688.01.T01:intron 30.0%
! GCATTTGAAACTATTTCCAT+TGG + Chr7:31016557-31016576 None:intergenic 30.0%
! GTGAACAACAATTTTCTTCT+AGG + Chr7:31017497-31017516 None:intergenic 30.0%
! TAACAATTTTCCAACGGTTT+TGG - Chr7:31018923-31018942 MsG0780037688.01.T01:CDS 30.0%
! TCAAAATCTTGACCTTTTTC+AGG - Chr7:31016803-31016822 MsG0780037688.01.T01:CDS 30.0%
! TCACATTTTCATTTGCAATG+TGG + Chr7:31018725-31018744 None:intergenic 30.0%
! TCTGATGAAACAGTTTTTCT+CGG + Chr7:31017638-31017657 None:intergenic 30.0%
! TTAAACAACTTAACGGATGT+TGG + Chr7:31018906-31018925 None:intergenic 30.0%
! TTTAGAAGCTTGTTCATGTT+TGG + Chr7:31018232-31018251 None:intergenic 30.0%
!! ACAGGTATGAGCATTTTAAT+CGG - Chr7:31017815-31017834 MsG0780037688.01.T01:intron 30.0%
!! GTGGATTGAATGAAGTTTTA+TGG + Chr7:31017705-31017724 None:intergenic 30.0%
!!! CAGTTTTAAGGTTTGATGAA+AGG + Chr7:31017006-31017025 None:intergenic 30.0%
!!! CTTATACAAGTTGGTTTTGT+AGG + Chr7:31018961-31018980 None:intergenic 30.0%
!!! GCATGCTTTGGTTTTTTTTT+AGG + Chr7:31018467-31018486 None:intergenic 30.0%
AAAGTACGCAAACAAAGGAA+TGG - Chr7:31018536-31018555 MsG0780037688.01.T01:intron 35.0%
AACTGAGCTTAAGAACAACA+AGG + Chr7:31016298-31016317 None:intergenic 35.0%
AAGTACGCAAACAAAGGAAT+GGG - Chr7:31018537-31018556 MsG0780037688.01.T01:intron 35.0%
ACAATATGACCATGAAACCT+GGG - Chr7:31016955-31016974 MsG0780037688.01.T01:intron 35.0%
ACGAATTCTAATTCCAGATC+TGG + Chr7:31016067-31016086 None:intergenic 35.0%
ACTGAGCTTAAGAACAACAA+GGG + Chr7:31016297-31016316 None:intergenic 35.0%
ATCCTATGGGAAAAAAGGAT+GGG - Chr7:31019259-31019278 MsG0780037688.01.T01:CDS 35.0%
ATGATTCAAGCATCAAGCAT+AGG - Chr7:31017764-31017783 MsG0780037688.01.T01:intron 35.0%
ATGTTGTCAAGAAGATCATG+AGG - Chr7:31019301-31019320 MsG0780037688.01.T01:CDS 35.0%
ATTCTTGATGCATGAGAAAG+AGG - Chr7:31019043-31019062 MsG0780037688.01.T01:intron 35.0%
CAAAGAGATGGAAGAATCTA+TGG - Chr7:31016032-31016051 MsG0780037688.01.T01:CDS 35.0%
CAAGATAGAGAAGAATTGCT+TGG - Chr7:31018329-31018348 MsG0780037688.01.T01:intron 35.0%
CATTGGCATCTTATACAAGT+TGG + Chr7:31018970-31018989 None:intergenic 35.0%
GCACAAGTAAGGATAGAATA+AGG + Chr7:31016272-31016291 None:intergenic 35.0%
GCACCAAATGAGTCAAATTA+TGG + Chr7:31016732-31016751 None:intergenic 35.0%
GTAAACGAATTCGTCGAATA+AGG + Chr7:31016119-31016138 None:intergenic 35.0%
GTATAAGATGCCAATGTTTG+AGG - Chr7:31018974-31018993 MsG0780037688.01.T01:CDS 35.0%
GTTTAACATTTGCTTGCACA+TGG + Chr7:31019215-31019234 None:intergenic 35.0%
TAAGGTTTCAGCACATACTA+TGG + Chr7:31016489-31016508 None:intergenic 35.0%
TATCCTATGGGAAAAAAGGA+TGG - Chr7:31019258-31019277 MsG0780037688.01.T01:CDS 35.0%
TCTACGGATAAAACTACACA+AGG - Chr7:31016583-31016602 MsG0780037688.01.T01:intron 35.0%
TGATGAAAATAGTGTGTAGG+GGG + Chr7:31017678-31017697 None:intergenic 35.0%
TGTTGTCAAGAAGATCATGA+GGG - Chr7:31019302-31019321 MsG0780037688.01.T01:CDS 35.0%
TGTTGTTCACACATTAGAGA+AGG - Chr7:31017507-31017526 MsG0780037688.01.T01:intron 35.0%
TTTCAAATGCGGAGTTTCTA+CGG - Chr7:31016567-31016586 MsG0780037688.01.T01:intron 35.0%
TTTGAGTGAGGGTAATGTTA+TGG + Chr7:31016348-31016367 None:intergenic 35.0%
! AAATTTTGCCTATGTACCCT+CGG + Chr7:31017968-31017987 None:intergenic 35.0%
! AAGCTCAGTTTTCTCCATAT+GGG - Chr7:31016308-31016327 MsG0780037688.01.T01:intron 35.0%
! AAGCTGGAACAAATTTTGGA+TGG + Chr7:31016982-31017001 None:intergenic 35.0%
! AGCTGGAACAAATTTTGGAT+GGG + Chr7:31016981-31017000 None:intergenic 35.0%
! AGGGTACATAGGCAAAATTT+TGG - Chr7:31017968-31017987 MsG0780037688.01.T01:intron 35.0%
! CGAATTCGTTTACTCAGTTT+TGG - Chr7:31016126-31016145 MsG0780037688.01.T01:intron 35.0%
! GAGAAAGAGGAAAACTTGTT+TGG - Chr7:31019056-31019075 MsG0780037688.01.T01:intron 35.0%
! TAAGCTCAGTTTTCTCCATA+TGG - Chr7:31016307-31016326 MsG0780037688.01.T01:intron 35.0%
!! ATTTGGTGCTCTGCTATAAT+TGG - Chr7:31016743-31016762 MsG0780037688.01.T01:CDS 35.0%
!! TTCGACCGATTTGACATATT+CGG - Chr7:31019010-31019029 MsG0780037688.01.T01:CDS 35.0%
!! TTTGGTGCTCTGCTATAATT+GGG - Chr7:31016744-31016763 MsG0780037688.01.T01:CDS 35.0%
!! TTTGGTTTGACTTCAACCTT+AGG + Chr7:31018214-31018233 None:intergenic 35.0%
!!! AAATGTAGGGTTTTGAGTGA+GGG + Chr7:31016359-31016378 None:intergenic 35.0%
!!! AGGTCAAGATTTTGAAGCTT+AGG + Chr7:31016798-31016817 None:intergenic 35.0%
!!! ATACAAGTTGGTTTTGTAGG+TGG + Chr7:31018958-31018977 None:intergenic 35.0%
!!! GATTTTGAAGCTTAGGACAA+AGG + Chr7:31016791-31016810 None:intergenic 35.0%
!!! TTTTCCAACGGTTTTGGTTA+TGG - Chr7:31018929-31018948 MsG0780037688.01.T01:CDS 35.0%
AAAACCAAAGCATGCGACAA+CGG - Chr7:31018472-31018491 MsG0780037688.01.T01:intron 40.0%
AGATGGGTCTTTGATGAAAG+CGG - Chr7:31019147-31019166 MsG0780037688.01.T01:CDS 40.0%
AGGATAGAATAAGGCAGATG+AGG + Chr7:31016263-31016282 None:intergenic 40.0%
AGTTACGTAGAACCCTGTTA+TGG - Chr7:31017871-31017890 MsG0780037688.01.T01:intron 40.0%
ATAGAGAAGAATTGCTTGGG+TGG - Chr7:31018333-31018352 MsG0780037688.01.T01:intron 40.0%
ATGTGAATCAGGATATCGTC+TGG + Chr7:31015965-31015984 None:intergenic 40.0%
CATTAAACTCCTCACCCATA+TGG + Chr7:31016325-31016344 None:intergenic 40.0%
CATTCTTGCCGGTAGATTAA+AGG - Chr7:31018617-31018636 MsG0780037688.01.T01:intron 40.0%
CCCAACCGAATATGTCAAAT+CGG + Chr7:31019018-31019037 None:intergenic 40.0%
GACAATATGACCATGAAACC+TGG - Chr7:31016954-31016973 MsG0780037688.01.T01:intron 40.0%
GATACGTATCCACGAAGTAT+CGG - Chr7:31017374-31017393 MsG0780037688.01.T01:intron 40.0%
GCTTCTAAATATGTTAGCCC+CGG - Chr7:31018243-31018262 MsG0780037688.01.T01:intron 40.0%
GGAAATCACTACAAGCATCT+TGG + Chr7:31019389-31019408 None:intergenic 40.0%
GGATAGAATAAGGCAGATGA+GGG + Chr7:31016262-31016281 None:intergenic 40.0%
GGGAAAAAAGGATGGGAAAT+AGG - Chr7:31019266-31019285 MsG0780037688.01.T01:CDS 40.0%
GTCATCCTCCTTTAATCTAC+CGG + Chr7:31018628-31018647 None:intergenic 40.0%
GTGAAGAGAGAATGTGAATC+AGG + Chr7:31015976-31015995 None:intergenic 40.0%
GTTACGTAGAACCCTGTTAT+GGG - Chr7:31017872-31017891 MsG0780037688.01.T01:intron 40.0%
TAGAGAAGAATTGCTTGGGT+GGG - Chr7:31018334-31018353 MsG0780037688.01.T01:intron 40.0%
TATAGTAATGACCGAGAACG+CGG - Chr7:31018129-31018148 MsG0780037688.01.T01:intron 40.0%
TGAACACAGGATGCATCATT+GGG - Chr7:31016226-31016245 MsG0780037688.01.T01:intron 40.0%
TGATTGTTACCGACAGAGAT+GGG - Chr7:31019131-31019150 MsG0780037688.01.T01:intron 40.0%
TTAACTACCGAGGAATTCCT+CGG + Chr7:31017612-31017631 None:intergenic 40.0%
TTAGAAGGACACATTCTTGC+CGG - Chr7:31018606-31018625 MsG0780037688.01.T01:intron 40.0%
TTCACACATTAGAGAAGGCT+GGG - Chr7:31017512-31017531 MsG0780037688.01.T01:intron 40.0%
TTGAACACAGGATGCATCAT+TGG - Chr7:31016225-31016244 MsG0780037688.01.T01:intron 40.0%
TTGACATATTCGGTTGGGTT+TGG - Chr7:31019020-31019039 MsG0780037688.01.T01:intron 40.0%
! ACAACGGACTCAAGAAAATG+CGG - Chr7:31018488-31018507 MsG0780037688.01.T01:intron 40.0%
! ACTGCCGAGGAATTTGAAAT+CGG - Chr7:31017573-31017592 MsG0780037688.01.T01:intron 40.0%
! AGCACATAGAAGGCAGTTTT+TGG - Chr7:31016915-31016934 MsG0780037688.01.T01:intron 40.0%
! AGGCAAGCTGGAACAAATTT+TGG + Chr7:31016986-31017005 None:intergenic 40.0%
! ATGCCAATGTTTGAGGTAGT+TGG - Chr7:31018981-31019000 MsG0780037688.01.T01:CDS 40.0%
! CACATAGAAGGCAGTTTTTG+GGG - Chr7:31016917-31016936 MsG0780037688.01.T01:intron 40.0%
! CCGATTTGACATATTCGGTT+GGG - Chr7:31019015-31019034 MsG0780037688.01.T01:CDS 40.0%
! GCACATAGAAGGCAGTTTTT+GGG - Chr7:31016916-31016935 MsG0780037688.01.T01:intron 40.0%
! TAAACTACCGAGGTTTTCCT+CGG + Chr7:31017916-31017935 None:intergenic 40.0%
! TCACGCATGGTACAGTTTTA+AGG + Chr7:31017018-31017037 None:intergenic 40.0%
! TGAAGTGAGAAAGGCTTGTT+TGG + Chr7:31016005-31016024 None:intergenic 40.0%
! TGCCAATGTTTGAGGTAGTT+GGG - Chr7:31018982-31019001 MsG0780037688.01.T01:CDS 40.0%
! TTAACTACCGAGGTTTTCCT+CGG + Chr7:31017942-31017961 None:intergenic 40.0%
! TTTAGTACCGAGGAAAACCT+CGG - Chr7:31017932-31017951 MsG0780037688.01.T01:intron 40.0%
!! ACCGATTTGACATATTCGGT+TGG - Chr7:31019014-31019033 MsG0780037688.01.T01:CDS 40.0%
!! AGAATGTGTCCTTCTAAAGC+CGG + Chr7:31018603-31018622 None:intergenic 40.0%
!!! CAAATGTAGGGTTTTGAGTG+AGG + Chr7:31016360-31016379 None:intergenic 40.0%
!!! TTCCCATCCTTTTTTCCCAT+AGG + Chr7:31019264-31019283 None:intergenic 40.0%
AAGAATTGCTTGGGTGGGTA+CGG - Chr7:31018339-31018358 MsG0780037688.01.T01:intron 45.0%
ACACTAGGCGCAATATTGGA+TGG + Chr7:31018418-31018437 None:intergenic 45.0%
ACCATGCGTGACTTTGCATT+TGG - Chr7:31017027-31017046 MsG0780037688.01.T01:intron 45.0%
ACCCCAACTACCTCAAACAT+TGG + Chr7:31018987-31019006 None:intergenic 45.0%
AGGTTTGATGAAAGGCAAGC+TGG + Chr7:31016998-31017017 None:intergenic 45.0%
ATCGGTATCCGATACGTATC+CGG + Chr7:31017336-31017355 None:intergenic 45.0%
ATGCGTGACTTTGCATTTGG+AGG - Chr7:31017030-31017049 MsG0780037688.01.T01:intron 45.0%
CAACAAGGGTTGCACAAGTA+AGG + Chr7:31016283-31016302 None:intergenic 45.0%
CAATCTGGTGCTTCAGGAAA+CGG - Chr7:31017121-31017140 MsG0780037688.01.T01:intron 45.0%
CATCAAAGACCCATCTCTGT+CGG + Chr7:31019143-31019162 None:intergenic 45.0%
CTACCGAGATTCCCATAACA+GGG + Chr7:31017886-31017905 None:intergenic 45.0%
CTATGTCAATCTGGTGCTTC+AGG - Chr7:31017115-31017134 MsG0780037688.01.T01:intron 45.0%
CTGTCGGTAACAATCACCTT+AGG + Chr7:31019127-31019146 None:intergenic 45.0%
CTTATTGCCGAGGAAAACCT+CGG - Chr7:31017906-31017925 MsG0780037688.01.T01:intron 45.0%
GAACACAGGATGCATCATTG+GGG - Chr7:31016227-31016246 MsG0780037688.01.T01:intron 45.0%
GAACCCTGTTATGGGAATCT+CGG - Chr7:31017880-31017899 MsG0780037688.01.T01:intron 45.0%
GAGTCCATAACCAAAACCGT+TGG + Chr7:31018936-31018955 None:intergenic 45.0%
GCTTGACATCTCCGGAAATT+TGG + Chr7:31018189-31018208 None:intergenic 45.0%
GTGATTGTTACCGACAGAGA+TGG - Chr7:31019130-31019149 MsG0780037688.01.T01:intron 45.0%
GTTCACACATTAGAGAAGGC+TGG - Chr7:31017511-31017530 MsG0780037688.01.T01:intron 45.0%
TAAAATACGCTTTGCCCCCT+CGG - Chr7:31017544-31017563 MsG0780037688.01.T01:intron 45.0%
TAGTTGCTACCTATGAAGCC+CGG - Chr7:31017283-31017302 MsG0780037688.01.T01:intron 45.0%
TATCCGATACGTATCCGGTA+CGG + Chr7:31017331-31017350 None:intergenic 45.0%
TATCGGATACCGATACTCCA+CGG - Chr7:31017342-31017361 MsG0780037688.01.T01:intron 45.0%
TATTGCGCCTAGTGTGTGAA+AGG - Chr7:31018423-31018442 MsG0780037688.01.T01:intron 45.0%
TCAAGAAGATCATGAGGGCA+TGG - Chr7:31019307-31019326 MsG0780037688.01.T01:CDS 45.0%
TCACACACTAGGCGCAATAT+TGG + Chr7:31018422-31018441 None:intergenic 45.0%
TCATCCTGCTCATTGAACAC+AGG - Chr7:31016213-31016232 MsG0780037688.01.T01:intron 45.0%
TCCAAATGCAAAGTCACGCA+TGG + Chr7:31017031-31017050 None:intergenic 45.0%
TCTTGCCGGTAGATTAAAGG+AGG - Chr7:31018620-31018639 MsG0780037688.01.T01:intron 45.0%
TGATACTCCACAGATACACG+AGG - Chr7:31017441-31017460 MsG0780037688.01.T01:intron 45.0%
TGCAGAAGCTCTTGAACATG+AGG + Chr7:31017169-31017188 None:intergenic 45.0%
TTAACTGCCGAGGAATTCCT+CGG - Chr7:31017602-31017621 MsG0780037688.01.T01:intron 45.0%
! AACAAATTTTGGATGGGCCC+AGG + Chr7:31016975-31016994 None:intergenic 45.0%
! ACGGTGTCAAGCAAATAAGG+CGG - Chr7:31018358-31018377 MsG0780037688.01.T01:intron 45.0%
! AGTGAGAAAGGCTTGTTTGG+TGG + Chr7:31016002-31016021 None:intergenic 45.0%
! CAACGGACTCAAGAAAATGC+GGG - Chr7:31018489-31018508 MsG0780037688.01.T01:intron 45.0%
! CAGTTTTCTCCATATGGGTG+AGG - Chr7:31016313-31016332 MsG0780037688.01.T01:intron 45.0%
! CATGAGGGCATGGAAAGATA+TGG - Chr7:31019317-31019336 MsG0780037688.01.T01:CDS 45.0%
! GAAGTATCCTCGTGTATCTG+TGG + Chr7:31017451-31017470 None:intergenic 45.0%
! GCAGCCGATTTCAAATTCCT+CGG + Chr7:31017580-31017599 None:intergenic 45.0%
! GCCAATGTTTGAGGTAGTTG+GGG - Chr7:31018983-31019002 MsG0780037688.01.T01:CDS 45.0%
! GGTACGGTGTCAAGCAAATA+AGG - Chr7:31018355-31018374 MsG0780037688.01.T01:intron 45.0%
! GGTTTGACTTCAACCTTAGG+CGG + Chr7:31018211-31018230 None:intergenic 45.0%
! GTGAGAAAGGCTTGTTTGGT+GGG + Chr7:31016001-31016020 None:intergenic 45.0%
!! ATGGTGTTACGTTCCAGATC+TGG - Chr7:31016051-31016070 MsG0780037688.01.T01:intron 45.0%
!! GTTAAGTACCGAGGGTACAT+AGG - Chr7:31017957-31017976 MsG0780037688.01.T01:intron 45.0%
!! TCTTGGAAGCATCTTGCTCT+TGG + Chr7:31018673-31018692 None:intergenic 45.0%
!!! TTTTGGGGCGATGGATACTT+TGG - Chr7:31016932-31016951 MsG0780037688.01.T01:intron 45.0%
ACCTCCACCGTTGAAGTTTC+CGG + Chr7:31015923-31015942 None:intergenic 50.0%
ACCTCGGTAGTTTAGTACCG+AGG - Chr7:31017922-31017941 MsG0780037688.01.T01:intron 50.0%
ATCCGATACGTATCCGGTAC+GGG + Chr7:31017330-31017349 None:intergenic 50.0%
ATCTCGGTAGCTTATTGCCG+AGG - Chr7:31017896-31017915 MsG0780037688.01.T01:intron 50.0%
ATGGCATAGGCTAGGAAAGG+TGG + Chr7:31019411-31019430 None:intergenic 50.0%
CGAAACATCTTCCGCGTTCT+CGG + Chr7:31018143-31018162 None:intergenic 50.0%
CGAGAACGCGGAAGATGTTT+CGG - Chr7:31018141-31018160 MsG0780037688.01.T01:intron 50.0%
CTCCACTCCTTTCACACACT+AGG + Chr7:31018433-31018452 None:intergenic 50.0%
CTTCAACGGTGGAGGTAGAT+AGG - Chr7:31015927-31015946 MsG0780037688.01.T01:CDS 50.0%
GAAGCCCGGATACTCCAAAA+CGG - Chr7:31017297-31017316 MsG0780037688.01.T01:intron 50.0%
GAAGCTGGGGTAAGAAAGGA+AGG - Chr7:31016157-31016176 MsG0780037688.01.T01:CDS 50.0%
GAGAACGCGGAAGATGTTTC+GGG - Chr7:31018142-31018161 MsG0780037688.01.T01:intron 50.0%
GCATCCTGTGTTCAATGAGC+AGG + Chr7:31016220-31016239 None:intergenic 50.0%
GCTACCGAGATTCCCATAAC+AGG + Chr7:31017887-31017906 None:intergenic 50.0%
GGGTCTTTGATGAAAGCGGT+TGG - Chr7:31019151-31019170 MsG0780037688.01.T01:CDS 50.0%
GTCATGGCATAGGCTAGGAA+AGG + Chr7:31019414-31019433 None:intergenic 50.0%
GTCTTCGCCGGAAACTTCAA+CGG - Chr7:31015913-31015932 MsG0780037688.01.T01:CDS 50.0%
GTGTTTGCCTTCTTCCGCTT+CGG + Chr7:31016095-31016114 None:intergenic 50.0%
TACCCGTACCGGATACGTAT+CGG - Chr7:31017325-31017344 MsG0780037688.01.T01:intron 50.0%
TCCTCGGTACTAAACTACCG+AGG + Chr7:31017926-31017945 None:intergenic 50.0%
TGGAGTTCACAACCATGCGA+TGG - Chr7:31018575-31018594 MsG0780037688.01.T01:intron 50.0%
TGGCATAGGCTAGGAAAGGT+GGG + Chr7:31019410-31019429 None:intergenic 50.0%
TTCTCGGCAGTTAACTACCG+AGG + Chr7:31017622-31017641 None:intergenic 50.0%
! ACCTCGGTAGTTAAGTACCG+AGG - Chr7:31017948-31017967 MsG0780037688.01.T01:intron 50.0%
! CGGTGTCAAGCAAATAAGGC+GGG - Chr7:31018359-31018378 MsG0780037688.01.T01:intron 50.0%
! TTGGAGTATCCGGGCTTCAT+AGG + Chr7:31017295-31017314 None:intergenic 50.0%
! TTTTGGTCTCGCGAGAAGCT+GGG - Chr7:31016143-31016162 MsG0780037688.01.T01:intron 50.0%
!! CCTCGGTAGTTAAGTACCGA+GGG - Chr7:31017949-31017968 MsG0780037688.01.T01:intron 50.0%
!! CGGGTGCTGTTCATGATTAG+TGG - Chr7:31018508-31018527 MsG0780037688.01.T01:intron 50.0%
!!! CGTCTCCGTTTTGGAGTATC+CGG + Chr7:31017305-31017324 None:intergenic 50.0%
!!! GTCTCCGTTTTGGAGTATCC+GGG + Chr7:31017304-31017323 None:intergenic 50.0%
AAACGGAGACGTACCCGTAC+CGG - Chr7:31017314-31017333 MsG0780037688.01.T01:intron 55.0%
AAGGGGTCATGGCATAGGCT+AGG + Chr7:31019419-31019438 None:intergenic 55.0%
ACCACTTCAAGCCCACGAAG+TGG - Chr7:31018272-31018291 MsG0780037688.01.T01:intron 55.0%
AGAATTCGTCGACGCCGAAG+CGG - Chr7:31016078-31016097 MsG0780037688.01.T01:intron 55.0%
CCCTCGGTACTTAACTACCG+AGG + Chr7:31017952-31017971 None:intergenic 55.0%
CGATACTCCACGGATACTCG+CGG - Chr7:31017352-31017371 MsG0780037688.01.T01:intron 55.0%
CGCCTAGTGTGTGAAAGGAG+TGG - Chr7:31018428-31018447 MsG0780037688.01.T01:intron 55.0%
CGCGAGTATCCGTGGAGTAT+CGG + Chr7:31017354-31017373 None:intergenic 55.0%
CTTAGGCGGCTTGACATCTC+CGG + Chr7:31018197-31018216 None:intergenic 55.0%
CTTGAAGTGGTACGACACCG+GGG + Chr7:31018263-31018282 None:intergenic 55.0%
GAGTCCGTTGTCGCATGCTT+TGG + Chr7:31018479-31018498 None:intergenic 55.0%
GCGAGAAGCTGGGGTAAGAA+AGG - Chr7:31016153-31016172 MsG0780037688.01.T01:intron 55.0%
GCTTGAAGTGGTACGACACC+GGG + Chr7:31018264-31018283 None:intergenic 55.0%
GGCTTGAAGTGGTACGACAC+CGG + Chr7:31018265-31018284 None:intergenic 55.0%
TACGTATCCGCGAGTATCCG+TGG + Chr7:31017362-31017381 None:intergenic 55.0%
TCAAGCCCACGAAGTGGACA+CGG - Chr7:31018278-31018297 MsG0780037688.01.T01:intron 55.0%
TCACAACCATGCGATGGAGC+CGG - Chr7:31018581-31018600 MsG0780037688.01.T01:intron 55.0%
TCCACTTCGTGGGCTTGAAG+TGG + Chr7:31018276-31018295 None:intergenic 55.0%
TTCGCCGGAAACTTCAACGG+TGG - Chr7:31015916-31015935 MsG0780037688.01.T01:CDS 55.0%
TTGGATGGGCCCAGGTTTCA+TGG + Chr7:31016967-31016986 None:intergenic 55.0%
TTTGGTCTCGCGAGAAGCTG+GGG - Chr7:31016144-31016163 MsG0780037688.01.T01:intron 55.0%
! GTACGGGTACGTCTCCGTTT+TGG + Chr7:31017314-31017333 None:intergenic 55.0%
!! GTTTTGGTCTCGCGAGAAGC+TGG - Chr7:31016142-31016161 MsG0780037688.01.T01:intron 55.0%
!!! GAAGGCAGTTTTTGGGGCGA+TGG - Chr7:31016923-31016942 MsG0780037688.01.T01:intron 55.0%
ACCTAGCCGTGTCCACTTCG+TGG + Chr7:31018287-31018306 None:intergenic 60.0%
CCTAGCCGTGTCCACTTCGT+GGG + Chr7:31018286-31018305 None:intergenic 60.0%
CCTCGGCAGTTAACTGCCGA+GGG + Chr7:31017580-31017561 None:intergenic 60.0%
CGGAGATGTCAAGCCGCCTA+AGG - Chr7:31018195-31018214 MsG0780037688.01.T01:intron 60.0%
CTCGGCAGTTAACTGCCGAG+GGG + Chr7:31017581-31017562 None:intergenic 60.0%
GCCGGAAACTTCAACGGTGG+AGG - Chr7:31015919-31015938 MsG0780037688.01.T01:CDS 60.0%
TCCTCGGCAGTTAACTGCCG+AGG + Chr7:31017564-31017583 None:intergenic 60.0%
TCGGCAGTTAACTGCCGAGG+GGG + Chr7:31017582-31017563 None:intergenic 60.0%
TCGGCTGCAGTTAACTGCCG+AGG - Chr7:31017592-31017611 MsG0780037688.01.T01:intron 60.0%
! CTAAAGCCGGCTCCATCGCA+TGG + Chr7:31018590-31018609 None:intergenic 60.0%
!! GCGATGGAGCCGGCTTTAGA+AGG - Chr7:31018591-31018610 MsG0780037688.01.T01:intron 60.0%
CCCACGAAGTGGACACGGCT+AGG - Chr7:31018283-31018302 MsG0780037688.01.T01:intron 65.0%
CCCTCGGCAGTTAACTGCCG+AGG - Chr7:31017560-31017579 MsG0780037688.01.T01:intron 65.0%
GTCGACGCCGAAGCGGAAGA+AGG - Chr7:31016085-31016104 MsG0780037688.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 31015911 31019440 31015911 ID=MsG0780037688.01;Name=MsG0780037688.01
Chr7 mRNA 31015911 31019440 31015911 ID=MsG0780037688.01.T01;Parent=MsG0780037688.01;Name=MsG0780037688.01.T01;_AED=0.38;_eAED=0.39;_QI=0|0|0|1|1|1|6|0|386
Chr7 exon 31019142 31019440 31019142 ID=MsG0780037688.01.T01:exon:1282;Parent=MsG0780037688.01.T01
Chr7 exon 31018747 31019035 31018747 ID=MsG0780037688.01.T01:exon:1283;Parent=MsG0780037688.01.T01
Chr7 exon 31016695 31016823 31016695 ID=MsG0780037688.01.T01:exon:1284;Parent=MsG0780037688.01.T01
Chr7 exon 31016347 31016571 31016347 ID=MsG0780037688.01.T01:exon:1285;Parent=MsG0780037688.01.T01
Chr7 exon 31016156 31016221 31016156 ID=MsG0780037688.01.T01:exon:1286;Parent=MsG0780037688.01.T01
Chr7 exon 31015911 31016063 31015911 ID=MsG0780037688.01.T01:exon:1287;Parent=MsG0780037688.01.T01
Chr7 CDS 31019142 31019440 31019142 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Chr7 CDS 31018747 31019035 31018747 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Chr7 CDS 31016695 31016823 31016695 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Chr7 CDS 31016347 31016571 31016347 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Chr7 CDS 31016156 31016221 31016156 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Chr7 CDS 31015911 31016063 31015911 ID=MsG0780037688.01.T01:cds;Parent=MsG0780037688.01.T01
Gene Sequence

>MsG0780037688.01.T01

ATGTCTTCGCCGGAAACTTCAACGGTGGAGGTAGATAGGATAAGCAATTTACCAGACGATATCCTGATTCACATTCTCTCTTCACTTCCCACCAAACAAGCCTTTCTCACTTCAATTCTTTCAAAGAGATGGAAGAATCTATGGTGTTACGTTCCAGATCTGGAATTAGAATTCGTCGACGCCGAAGCGGAAGAAGGCAAACACTCCTTATTCGACGAATTCGTTTACTCAGTTTTGGTCTCGCGAGAAGCTGGGGTAAGAAAGGAAGGCAGAGACACGTTTTCCAATTATGTATCACATTTTCTCCATATGGGTGAGGAGTTTAATGCCATAACATTACCCTCACTCAAAACCCTACATTTGAAATACATTCGCTTTCAACAAGAAGATGATCTTGTCTTCCTTACAGATAATTGTCCAAATCTTGAAGATCTTCTACTATTTGAAATTAACTATGACACTTCTTATTCCATAGTATGTGCTGAAACCTTAACAAAGTTGAAAAGAGTAGATATTACTGATTGTGATTTCTATATTCCAATGGAAATAGTTTCAAATGCGGAGTTTCTACGGATAAAACTACACAAGTGGATATCAAAGTACGCAAACAAAGGAATGGGATTGAACATTCTTAATGGAGTTCACAACCATGCGATGGAGCCGGCTTTAGAAGGACACATTCTTGCCGGTAGATTAAAGGAGGATGACAAGAAGATTGAAAATAGAGGTGACAAGAAGCCGTTGCAATATCTAATCTCGAAGTTGAAGGAGCACAACTATACTTATTACTCAAGAACACATGGTGAAAGTAATACAATCGAAGATATCTTTTGGGCTCATCCAACATCCGTTAAGTTGTTTAACAATTTTCCAACGGTTTTGGTTATGGACTCCACCTACAAAACCAACTTGTATAAGATGCCAATGTTTGAGGTAGTTGGGGTGATTGTTACCGACAGAGATGGGTCTTTGATGAAAGCGGTTGGAATTGTTTTCCCGAAAGTTATGGTGAGTAATCGCGATGTTGTCAAGAAGATCATGAGGGCATGGAAAGATATGGTTGAATCGTCCACTCAAGAGTTATATGCAAATGCATTAGTGGAGTTCCAAGATGCTTGTAGTGATTTCCCACCTTTCCTAGCCTATGCCATGACCCCTTGA
Protein sequence

>MsG0780037688.01.T01

MSSPETSTVEVDRISNLPDDILIHILSSLPTKQAFLTSILSKRWKNLWCYVPDLELEFVDAEAEEGKHSLFDEFVYSVLVSREAGVRKEGRDTFSNYVSHFLHMGEEFNAITLPSLKTLHLKYIRFQQEDDLVFLTDNCPNLEDLLLFEINYDTSYSIVCAETLTKLKRVDITDCDFYIPMEIVSNAEFLRIKLHKWISKYANKGMGLNILNGVHNHAMEPALEGHILAGRLKEDDKKIENRGDKKPLQYLISKLKEHNYTYYSRTHGESNTIEDIFWAHPTSVKLFNNFPTVLVMDSTYKTNLYKMPMFEVVGVIVTDRDGSLMKAVGIVFPKVMVSNRDVVKKIMRAWKDMVESSTQELYANALVEFQDACSDFPPFLAYAMTP*