AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004050.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004050.01.T01 MTR_1g073690 97.872 470 5 2 1 466 1 469 0.0 884
MsG0180004050.01.T01 MTR_3g055990 49.839 311 115 10 1 284 1 297 5.88e-87 275
MsG0180004050.01.T01 MTR_3g055990 49.839 311 115 10 1 284 1 297 6.57e-87 274
MsG0180004050.01.T01 MTR_2g026180 62.567 187 70 0 4 190 2 188 1.01e-84 269
MsG0180004050.01.T01 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.83e-82 262
MsG0180004050.01.T01 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.87e-82 262
MsG0180004050.01.T01 MTR_3g103420 54.315 197 85 3 1 192 5 201 2.58e-66 218
MsG0180004050.01.T01 MTR_6g004810 43.750 208 97 5 6 209 45 236 2.76e-51 178
MsG0180004050.01.T01 MTR_6g004810 45.055 91 49 1 96 186 33 122 1.45e-17 84.7
MsG0180004050.01.T01 MTR_2g026180 61.207 116 45 0 75 190 3 118 4.12e-44 160
MsG0180004050.01.T01 MTR_2g026180 32.927 82 54 1 7 87 37 118 7.98e-13 70.5
MsG0180004050.01.T01 MTR_3g082650 37.912 182 98 3 6 186 18 185 5.80e-43 155
MsG0180004050.01.T01 MTR_3g082650 50.000 96 45 2 91 186 3 95 4.24e-22 97.8
MsG0180004050.01.T01 MTR_5g017280 34.387 253 141 5 4 247 2 238 2.41e-37 140
MsG0180004050.01.T01 MTR_5g017280 30.342 234 130 6 7 208 93 325 3.82e-22 98.2
MsG0180004050.01.T01 MTR_5g017280 34.387 253 141 5 4 247 2 238 3.77e-37 140
MsG0180004050.01.T01 MTR_5g017280 30.342 234 130 6 7 208 93 325 4.11e-22 98.2
MsG0180004050.01.T01 MTR_8g463890 30.108 186 114 2 2 184 69 241 1.07e-24 106
MsG0180004050.01.T01 MTR_4g088010 30.055 183 113 3 2 184 72 239 5.92e-20 91.3
MsG0180004050.01.T01 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.31e-16 80.5
MsG0180004050.01.T01 MTR_3g116130 37.037 81 51 0 103 183 24 104 8.84e-11 63.2
MsG0180004050.01.T01 MTR_5g064120 38.750 80 48 1 2 80 12 91 8.03e-16 78.2
MsG0180004050.01.T01 MTR_5g088220 24.865 185 131 2 1 184 160 337 8.87e-16 80.1
MsG0180004050.01.T01 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.06e-15 79.0
MsG0180004050.01.T01 MTR_4g035310 36.250 80 50 1 2 80 12 91 7.42e-15 75.1
MsG0180004050.01.T01 MTR_4g035310 36.250 80 50 1 2 80 12 91 8.89e-15 74.7
MsG0180004050.01.T01 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.88e-15 74.3
MsG0180004050.01.T01 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.91e-15 74.3
MsG0180004050.01.T01 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.46e-14 76.3
MsG0180004050.01.T01 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.46e-14 74.3
MsG0180004050.01.T01 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.22e-11 64.7
MsG0180004050.01.T01 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.50e-14 74.3
MsG0180004050.01.T01 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.26e-11 64.7
MsG0180004050.01.T01 MTR_4g104470 31.447 159 97 3 3 159 119 267 1.61e-14 74.3
MsG0180004050.01.T01 MTR_4g104470 43.750 80 42 2 109 186 123 201 1.04e-11 66.2
MsG0180004050.01.T01 MTR_7g013730 44.304 79 42 1 7 83 41 119 1.63e-14 73.6
MsG0180004050.01.T01 MTR_7g013730 39.773 88 51 2 105 191 37 123 1.92e-11 64.7
MsG0180004050.01.T01 MTR_3g092490 33.333 108 70 2 2 108 22 128 2.12e-14 71.6
MsG0180004050.01.T01 MTR_7g117495 37.500 80 49 1 2 80 14 93 8.54e-14 71.6
MsG0180004050.01.T01 MTR_7g117495 37.500 80 49 1 2 80 14 93 1.17e-13 71.2
MsG0180004050.01.T01 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.42e-13 73.2
MsG0180004050.01.T01 MTR_1g064230 30.808 198 117 6 7 190 85 276 2.26e-13 70.9
MsG0180004050.01.T01 MTR_4g085540 28.977 176 111 5 8 178 215 381 3.47e-13 72.4
MsG0180004050.01.T01 MTR_2g097960 30.952 168 90 4 8 166 17 167 5.31e-13 70.9
MsG0180004050.01.T01 MTR_3g065190 29.121 182 112 5 9 188 28 194 1.13e-12 69.7
MsG0180004050.01.T01 MTR_3g084040 38.961 77 47 0 104 180 32 108 1.56e-12 65.5
MsG0180004050.01.T01 MTR_3g080130 42.029 69 37 1 7 75 37 102 4.70e-12 63.9
MsG0180004050.01.T01 MTR_4g109540 42.308 78 44 1 107 183 41 118 6.54e-12 66.2
MsG0180004050.01.T01 MTR_4g109540 52.083 48 23 0 7 54 43 90 1.64e-11 65.1
MsG0180004050.01.T01 MTR_1g097440 27.778 180 109 7 8 178 211 378 9.96e-12 67.8
MsG0180004050.01.T01 MTR_3g014000 54.167 48 18 1 8 55 36 79 1.33e-11 62.4
MsG0180004050.01.T01 MTR_4g070190 34.211 76 48 1 7 80 9 84 1.71e-11 62.8
MsG0180004050.01.T01 MTR_4g070080 32.895 76 49 1 7 80 7 82 1.86e-11 62.0
MsG0180004050.01.T01 MTR_7g102730 24.419 172 125 4 2 171 185 353 2.85e-11 66.2
MsG0180004050.01.T01 MTR_4g070080 32.895 76 49 1 7 80 7 82 4.85e-11 61.6
MsG0180004050.01.T01 MTR_4g124940 25.161 310 181 12 8 294 48 329 5.96e-11 64.7
MsG0180004050.01.T01 MTR_3g101370 25.641 156 105 3 3 156 90 236 7.00e-11 64.3
MsG0180004050.01.T01 MTR_3g025880 37.349 83 49 2 108 187 44 126 7.49e-11 64.3
MsG0180004050.01.T01 MTR_4g070140 32.895 76 49 1 7 80 9 84 8.70e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004050.01.T01 AT2G33410 56.659 413 144 6 1 409 1 382 5.16e-120 357
MsG0180004050.01.T01 AT4G14300 58.807 352 121 6 1 345 1 335 7.48e-109 328
MsG0180004050.01.T01 AT4G14300 58.807 352 121 6 1 345 1 335 7.48e-109 328
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 2.22e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 2.22e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 2.22e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 2.22e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 2.22e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 3.87e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 3.87e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 3.87e-86 272
MsG0180004050.01.T01 AT5G55550 59.361 219 70 3 1 206 1 213 3.87e-86 272
MsG0180004050.01.T01 AT4G26650 62.304 191 67 1 3 188 9 199 2.54e-83 264
MsG0180004050.01.T01 AT4G26650 62.304 191 67 1 3 188 12 202 2.76e-83 264
MsG0180004050.01.T01 AT3G07810 59.500 200 81 0 1 200 1 200 3.09e-81 260
MsG0180004050.01.T01 AT3G07810 59.500 200 81 0 1 200 1 200 3.24e-81 260
MsG0180004050.01.T01 AT5G55550 48.872 266 70 4 1 206 1 260 2.03e-77 250
MsG0180004050.01.T01 AT5G55550 48.872 266 70 4 1 206 1 260 2.40e-77 250
MsG0180004050.01.T01 AT5G47620 55.080 187 82 1 1 187 1 185 3.96e-72 234
MsG0180004050.01.T01 AT5G47620 55.080 187 82 1 1 187 1 185 3.96e-72 234
MsG0180004050.01.T01 AT5G47620 55.080 187 82 1 1 187 1 185 3.96e-72 234
MsG0180004050.01.T01 AT5G47620 49.282 209 82 2 1 187 1 207 4.61e-67 222
MsG0180004050.01.T01 AT1G58470 48.744 199 90 2 1 187 1 199 1.08e-57 194
MsG0180004050.01.T01 AT1G58470 48.744 199 90 2 1 187 1 199 1.08e-57 194
MsG0180004050.01.T01 AT1G17640 44.444 207 103 2 6 211 66 261 1.18e-54 187
MsG0180004050.01.T01 AT1G17640 44.444 207 103 2 6 211 66 261 1.18e-54 187
MsG0180004050.01.T01 AT1G17640 44.444 207 103 2 6 211 66 261 1.18e-54 187
MsG0180004050.01.T01 AT3G13224 43.617 188 85 3 6 188 19 190 5.81e-51 177
MsG0180004050.01.T01 AT3G13224 49.474 95 47 1 92 186 3 96 4.37e-21 94.7
MsG0180004050.01.T01 AT3G13224 43.316 187 85 3 7 188 11 181 1.02e-49 173
MsG0180004050.01.T01 AT3G13224 50.000 82 40 1 105 186 7 87 4.79e-20 91.7
MsG0180004050.01.T01 AT3G13224 44.311 167 73 2 6 168 19 169 1.28e-44 156
MsG0180004050.01.T01 AT3G13224 49.474 95 47 1 92 186 3 96 3.12e-20 89.7
MsG0180004050.01.T01 AT5G47620 52.381 126 57 2 63 187 2 125 1.63e-37 141
MsG0180004050.01.T01 AT5G47620 30.612 98 66 2 3 99 43 139 1.04e-11 66.6
MsG0180004050.01.T01 AT5G40490 31.727 249 140 5 6 253 42 261 7.81e-31 124
MsG0180004050.01.T01 AT4G36960 33.333 198 109 4 5 196 2 182 5.33e-30 120
MsG0180004050.01.T01 AT4G36960 25.862 232 116 4 7 187 92 318 7.17e-18 85.5
MsG0180004050.01.T01 AT4G36960 33.333 198 109 4 5 196 2 182 5.33e-30 120
MsG0180004050.01.T01 AT4G36960 25.862 232 116 4 7 187 92 318 7.17e-18 85.5
MsG0180004050.01.T01 AT5G40490 33.047 233 122 4 24 253 43 244 1.47e-28 117
MsG0180004050.01.T01 AT5G40490 47.826 69 33 2 118 186 37 102 9.36e-13 70.1
MsG0180004050.01.T01 AT3G15010 30.108 186 114 2 2 184 71 243 2.47e-21 96.3
MsG0180004050.01.T01 AT3G15010 30.108 186 114 2 2 184 71 243 2.47e-21 96.3
MsG0180004050.01.T01 AT1G20880 42.500 80 45 1 2 80 20 99 1.41e-17 83.2
MsG0180004050.01.T01 AT1G20880 42.500 80 45 1 2 80 20 99 1.41e-17 83.2
MsG0180004050.01.T01 AT1G20880 42.500 80 45 1 2 80 20 99 1.41e-17 83.2
MsG0180004050.01.T01 AT1G76460 41.250 80 46 1 2 80 20 99 2.65e-17 82.4
MsG0180004050.01.T01 AT1G76460 29.707 239 129 7 103 303 19 256 2.98e-12 67.4
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G56860 28.191 188 119 4 2 177 136 319 4.08e-15 77.8
MsG0180004050.01.T01 AT3G54770 37.500 80 49 1 2 80 13 92 8.90e-15 74.7
MsG0180004050.01.T01 AT2G41060 24.832 298 193 6 2 284 124 405 8.95e-15 76.6
MsG0180004050.01.T01 AT2G41060 24.832 298 193 6 2 284 124 405 8.95e-15 76.6
MsG0180004050.01.T01 AT2G41060 24.832 298 193 6 2 284 124 405 8.95e-15 76.6
MsG0180004050.01.T01 AT4G39260 36.709 79 48 1 7 83 7 85 9.39e-15 70.1
MsG0180004050.01.T01 AT3G54770 37.500 80 49 1 2 80 13 92 9.74e-15 74.7
MsG0180004050.01.T01 AT2G23350 30.114 176 109 5 8 178 227 393 1.09e-14 77.0
MsG0180004050.01.T01 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MsG0180004050.01.T01 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MsG0180004050.01.T01 AT3G26420 41.026 78 45 1 109 185 8 85 5.02e-14 72.0
MsG0180004050.01.T01 AT1G33470 35.000 80 51 1 2 80 3 82 5.14e-14 72.0
MsG0180004050.01.T01 AT1G33470 35.000 80 51 1 2 80 3 82 5.36e-14 72.0
MsG0180004050.01.T01 AT1G33470 35.000 80 51 1 2 80 3 82 5.43e-14 72.0
MsG0180004050.01.T01 AT2G37220 31.053 190 117 5 7 183 92 280 1.32e-13 71.6
MsG0180004050.01.T01 AT3G23830 35.514 107 60 3 93 190 12 118 2.58e-13 67.4
MsG0180004050.01.T01 AT3G23830 36.145 83 51 1 7 87 36 118 3.96e-11 61.2
MsG0180004050.01.T01 AT3G23830 35.514 107 60 3 93 190 12 118 2.58e-13 67.4
MsG0180004050.01.T01 AT3G23830 36.145 83 51 1 7 87 36 118 3.96e-11 61.2
MsG0180004050.01.T01 AT5G61030 40.000 80 47 1 105 183 37 116 2.68e-13 70.9
MsG0180004050.01.T01 AT5G61030 37.975 79 47 1 7 83 41 119 1.52e-11 65.9
MsG0180004050.01.T01 AT5G61030 40.000 80 47 1 105 183 37 116 2.68e-13 70.9
MsG0180004050.01.T01 AT5G61030 37.975 79 47 1 7 83 41 119 1.52e-11 65.9
MsG0180004050.01.T01 AT1G78260 35.000 80 51 1 2 80 13 92 3.04e-13 70.5
MsG0180004050.01.T01 AT3G16380 28.485 165 108 5 2 161 198 357 3.04e-13 72.4
MsG0180004050.01.T01 AT5G04280 37.975 79 48 1 109 186 8 86 3.08e-13 70.9
MsG0180004050.01.T01 AT5G04280 35.526 76 47 1 7 80 8 83 7.24e-13 69.7
MsG0180004050.01.T01 AT1G22910 30.435 115 74 3 2 115 9 118 3.31e-13 69.7
MsG0180004050.01.T01 AT1G22330 35.000 80 51 1 2 80 13 92 3.58e-13 70.5
MsG0180004050.01.T01 AT1G22910 30.435 115 74 3 2 115 9 118 3.62e-13 69.7
MsG0180004050.01.T01 AT4G16280 28.037 214 115 9 7 204 46 236 3.80e-13 72.0
MsG0180004050.01.T01 AT4G16280 28.037 214 115 9 7 204 121 311 3.88e-13 72.4
MsG0180004050.01.T01 AT4G00830 25.000 152 90 3 7 156 117 246 4.11e-13 71.6
MsG0180004050.01.T01 AT2G36660 27.059 170 111 6 8 171 203 365 6.39e-13 71.2
MsG0180004050.01.T01 AT4G16280 28.037 214 115 9 7 204 121 311 6.80e-13 71.2
MsG0180004050.01.T01 AT4G00830 25.974 154 86 5 7 156 117 246 7.12e-13 70.9
MsG0180004050.01.T01 AT4G00830 25.974 154 86 5 7 156 117 246 7.12e-13 70.9
MsG0180004050.01.T01 AT4G00830 25.974 154 86 5 7 156 117 246 7.12e-13 70.9
MsG0180004050.01.T01 AT1G78260 35.000 80 51 1 2 80 13 92 7.21e-13 69.3
MsG0180004050.01.T01 AT2G46780 32.500 80 53 1 2 80 18 97 8.36e-13 69.7
MsG0180004050.01.T01 AT2G46780 35.714 84 54 0 101 184 15 98 2.52e-11 65.5
MsG0180004050.01.T01 AT2G46780 32.500 80 53 1 2 80 18 97 8.36e-13 69.7
MsG0180004050.01.T01 AT2G46780 35.714 84 54 0 101 184 15 98 2.52e-11 65.5
MsG0180004050.01.T01 AT4G39260 34.146 82 52 1 1 80 1 82 8.85e-13 65.5
MsG0180004050.01.T01 AT1G60650 40.659 91 52 2 97 186 2 91 1.71e-12 68.6
MsG0180004050.01.T01 AT1G60650 37.500 64 40 0 5 68 11 74 2.88e-11 64.7
MsG0180004050.01.T01 AT1G60650 40.659 91 52 2 97 186 2 91 1.71e-12 68.6
MsG0180004050.01.T01 AT1G60650 37.500 64 40 0 5 68 11 74 2.88e-11 64.7
MsG0180004050.01.T01 AT3G19130 28.251 223 132 7 4 214 106 312 1.75e-12 69.7
MsG0180004050.01.T01 AT4G39260 35.526 76 47 1 7 80 7 82 2.22e-12 65.9
MsG0180004050.01.T01 AT4G39260 36.364 66 42 0 1 66 1 66 3.16e-12 63.5
MsG0180004050.01.T01 AT4G34110 27.273 176 120 4 8 181 217 386 3.22e-12 69.3
MsG0180004050.01.T01 AT2G18510 27.869 183 115 4 8 188 27 194 3.30e-12 68.2
MsG0180004050.01.T01 AT5G50250 29.518 166 97 4 4 163 111 262 4.02e-12 67.4
MsG0180004050.01.T01 AT1G22910 30.435 115 74 3 2 115 9 118 4.84e-12 67.8
MsG0180004050.01.T01 AT1G49600 28.755 233 137 8 4 229 117 327 8.97e-12 67.4
MsG0180004050.01.T01 AT5G54900 26.768 198 117 5 3 193 57 233 9.86e-12 67.0
MsG0180004050.01.T01 AT2G21660 34.211 76 48 1 7 80 9 84 1.69e-11 62.8
MsG0180004050.01.T01 AT2G21660 34.211 76 48 1 7 80 9 84 2.38e-11 62.8
MsG0180004050.01.T01 AT4G13850 50.000 50 25 0 7 56 36 85 2.38e-11 62.0
MsG0180004050.01.T01 AT4G13850 50.000 50 25 0 7 56 36 85 2.90e-11 62.0
MsG0180004050.01.T01 AT4G13850 50.000 50 25 0 7 56 36 85 3.22e-11 62.0
MsG0180004050.01.T01 AT1G22760 27.879 165 93 5 5 161 135 281 4.07e-11 65.9
MsG0180004050.01.T01 AT1G74230 34.286 105 65 1 79 183 9 109 4.09e-11 64.3
MsG0180004050.01.T01 AT5G19350 25.654 191 119 5 8 193 26 198 7.12e-11 64.3
MsG0180004050.01.T01 AT5G19350 25.654 191 119 5 8 193 26 198 7.16e-11 64.3
MsG0180004050.01.T01 AT4G13860 41.892 74 42 1 109 181 4 77 8.15e-11 58.9

Find 214 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTGCAGCGGCTGGATA+TGG 0.199366 1:+72502306 MsG0180004050.01.T01:CDS
GCTCAAGCATCTGGTAATTA+TGG 0.207271 1:+72502573 MsG0180004050.01.T01:CDS
GAGAGAGAAGTTGAGGATTT+GGG 0.208672 1:-72500038 None:intergenic
CGTCAGTACTTTGAGGCTTA+TGG 0.215160 1:+72501649 MsG0180004050.01.T01:CDS
AACGACCATCATATGCATTT+TGG 0.220885 1:-72501930 None:intergenic
AGAGAGAGAAGTTGAGGATT+TGG 0.221002 1:-72500039 None:intergenic
TCCCTCTGGCTATGGCTCTA+TGG 0.223448 1:+72502209 MsG0180004050.01.T01:CDS
TACGGTGCTGCTGCTGGATA+TGG 0.233890 1:+72502021 MsG0180004050.01.T01:CDS
GGGGACACAAATGGAAATTC+TGG 0.245972 1:+72502519 MsG0180004050.01.T01:CDS
AAGACATTTCATGATTTAAA+TGG 0.251191 1:+72501778 MsG0180004050.01.T01:CDS
CAGATCCTTCTGTTCTTGAT+AGG 0.255513 1:+72500321 MsG0180004050.01.T01:CDS
GGTGGAAGTGATAATTCTTA+TGG 0.266263 1:+72502369 MsG0180004050.01.T01:CDS
AGAGAGTAAGAGAGAGAAAA+AGG 0.274818 1:+72500134 MsG0180004050.01.T01:five_prime_UTR
AGATCTGGAAACTCCAATTC+TGG 0.283173 1:+72501553 MsG0180004050.01.T01:CDS
GGTGCTGTTGGTGGGCGTAC+TGG 0.285659 1:+72502408 MsG0180004050.01.T01:CDS
ACTGGACGACCACGAGGATT+TGG 0.286841 1:+72501709 MsG0180004050.01.T01:CDS
AAGGAGCATTTCAGCAATTA+TGG 0.288185 1:+72500224 MsG0180004050.01.T01:CDS
TGACCACTAGCATTACTATT+TGG 0.290071 1:-72502438 None:intergenic
TTACGGTAACGCTGCTCCTT+GGG 0.294029 1:+72502233 MsG0180004050.01.T01:CDS
CCAAGTGGTGGTGCTGGATC+TGG 0.298460 1:+72502261 MsG0180004050.01.T01:CDS
GCTGTTGGGCTTGTCGAGAC+TGG 0.303409 1:-72502650 None:intergenic
GCTAGCAATGGCCTTGGTTA+TGG 0.305001 1:+72502054 MsG0180004050.01.T01:CDS
ATTTCCACCATTCCCAGAAT+TGG 0.306814 1:-72501566 None:intergenic
CTAGTTTATAATAAGTAGTA+TGG 0.308053 1:+72502849 MsG0180004050.01.T01:three_prime_UTR
TGGTGGCAGTGGCAGCTATA+TGG 0.319199 1:+72502485 MsG0180004050.01.T01:CDS
TAAGCAGCATTAGGGACATT+TGG 0.319444 1:-72502147 None:intergenic
CACCAGGATTGGCATCCTTT+GGG 0.321613 1:-72501828 None:intergenic
TATCAAGGGTATGGAGCTTC+TGG 0.321667 1:+72501901 MsG0180004050.01.T01:CDS
GGGAATCAAGGTTACGGATA+TGG 0.322347 1:+72502327 MsG0180004050.01.T01:CDS
TTGATAGTTAAATCTCTTGC+TGG 0.325345 1:+72502680 MsG0180004050.01.T01:three_prime_UTR
GCTCATGTTGTAAGATTAAC+AGG 0.339096 1:-72502725 None:intergenic
CCACCAGCATAAGCAGCATT+AGG 0.341386 1:-72502156 None:intergenic
GTGGTGGCCCAAGGAGTTCA+TGG 0.341617 1:+72502175 MsG0180004050.01.T01:CDS
GCACCAGGATTGGCATCCTT+TGG 0.343147 1:-72501829 None:intergenic
GCAGGTGGATTCCCACCTTA+TGG 0.345772 1:+72501988 MsG0180004050.01.T01:CDS
AGCTATATGGGCAGTGGCTA+TGG 0.349286 1:+72502498 MsG0180004050.01.T01:CDS
GAAGACAAACATGTTATTGA+TGG 0.351272 1:+72500350 MsG0180004050.01.T01:CDS
ATTTCTGTCTCTTCGAGATC+TGG 0.352182 1:+72501538 MsG0180004050.01.T01:CDS
GGTGCTCCAAGTGGTGGTGC+TGG 0.352327 1:+72502255 MsG0180004050.01.T01:CDS
TATGGGAATCCAGGTGTATA+TGG 0.357794 1:+72502387 MsG0180004050.01.T01:CDS
GTGCTGTTGGTGGGCGTACT+GGG 0.358635 1:+72502409 MsG0180004050.01.T01:CDS
AAGCAGCATTAGGGACATTT+GGG 0.361470 1:-72502146 None:intergenic
GGACCTGCTGCTGCAACATA+TGG 0.365215 1:+72502120 MsG0180004050.01.T01:CDS
TATGGGACTCCTCAGGGAAA+TGG 0.366806 1:+72502591 MsG0180004050.01.T01:CDS
CTGCATCAAACCATCATATA+AGG 0.371800 1:-72503005 None:intergenic
CTGGACGACCACGAGGATTT+GGG 0.374739 1:+72501710 MsG0180004050.01.T01:CDS
GGTGGTGCCGCTGCTGGTTA+TGG 0.375834 1:+72502096 MsG0180004050.01.T01:CDS
CCCTCTGGCTATGGCTCTAT+GGG 0.377410 1:+72502210 MsG0180004050.01.T01:CDS
CTCTCTTGAGAAAGCCCTCT+TGG 0.380820 1:-72501506 None:intergenic
ACTATCAAAATTACTGCTGT+TGG 0.386629 1:-72502665 None:intergenic
ACCTAGAGGCTTTGGTTTCG+TGG 0.390416 1:+72500292 MsG0180004050.01.T01:CDS
ATGGGACTCCTCAGGGAAAT+GGG 0.391721 1:+72502592 MsG0180004050.01.T01:CDS
GGAGGTGGTAGTGGCGGAAT+GGG 0.393257 1:+72501874 MsG0180004050.01.T01:CDS
GCTCAGGCTCCCTCTGGCTA+TGG 0.395122 1:+72502201 MsG0180004050.01.T01:CDS
TGAGCAGGCCATGAACTCCT+TGG 0.399463 1:-72502183 None:intergenic
TCTGCTTACGGTGCTGCTGC+TGG 0.402283 1:+72502015 MsG0180004050.01.T01:CDS
CTATCAAAATTACTGCTGTT+GGG 0.403143 1:-72502664 None:intergenic
GCTGGTTATGGTGGTGGCTA+TGG 0.403993 1:+72502621 MsG0180004050.01.T01:CDS
GGGCAAGCTGGTTATGGTGG+TGG 0.405622 1:+72502615 MsG0180004050.01.T01:CDS
GGTGGTTATGGCGGCGGGTA+TGG 0.406263 1:+72502348 MsG0180004050.01.T01:CDS
CTCGTGGTCGTCCAGTATTT+TGG 0.406861 1:-72501702 None:intergenic
AAGGAGTTCATGGCCTGCTC+AGG 0.407314 1:+72502185 MsG0180004050.01.T01:CDS
ACTGGTAAACCTAGAGGCTT+TGG 0.407636 1:+72500284 MsG0180004050.01.T01:CDS
CCCATATCCAGCCGCTGCAC+TGG 0.408284 1:-72502307 None:intergenic
CTCAAGCATCTGGTAATTAT+GGG 0.410457 1:+72502574 MsG0180004050.01.T01:CDS
ATACCGAGGAGGCAGTTGAT+AGG 0.410687 1:+72501746 MsG0180004050.01.T01:CDS
AAAATTCCGTCAGTACTTTG+AGG 0.411179 1:+72501642 MsG0180004050.01.T01:CDS
GTTACGGTAACGCTGCTCCT+TGG 0.411640 1:+72502232 MsG0180004050.01.T01:CDS
GGTTACGGATATGGTGGTTA+TGG 0.414630 1:+72502336 MsG0180004050.01.T01:CDS
TAGCCAGAGGGAGCCTGAGC+AGG 0.416103 1:-72502198 None:intergenic
AAATAGTAATGCTAGTGGTC+AGG 0.416638 1:+72502440 MsG0180004050.01.T01:CDS
AGATCCTTCTGTTCTTGATA+GGG 0.422703 1:+72500322 MsG0180004050.01.T01:CDS
TGGAGGGTTGCCTCCCACTC+TGG 0.424326 1:+72501612 MsG0180004050.01.T01:CDS
GTCATGTATGACCAAAATAC+TGG 0.425122 1:+72501691 MsG0180004050.01.T01:CDS
TGGAGGTGGTAGTGGCGGAA+TGG 0.426792 1:+72501873 MsG0180004050.01.T01:CDS
CACCAGCATAAGCAGCATTA+GGG 0.428191 1:-72502155 None:intergenic
GTGGAAGTGATAATTCTTAT+GGG 0.428912 1:+72502370 MsG0180004050.01.T01:CDS
TTCCCATATGTTGCAGCAGC+AGG 0.429236 1:-72502123 None:intergenic
GGTGGTGCTGGAGGTGGTAG+TGG 0.429702 1:+72501865 MsG0180004050.01.T01:CDS
TAAAGAGGAAGAGGGTTTCG+AGG 0.430381 1:-72499982 None:intergenic
GAAGAAGAATAAAGAGGAAG+AGG 0.430436 1:-72499991 None:intergenic
GAGCAGGCCATGAACTCCTT+GGG 0.431541 1:-72502182 None:intergenic
TGGCCTGCTCAGGCTCCCTC+TGG 0.433036 1:+72502195 MsG0180004050.01.T01:CDS
TCTGAACAGGCTCAAGCATC+TGG 0.438324 1:+72502564 MsG0180004050.01.T01:CDS
AATCCACCTGCAGCACTTTG+AGG 0.446480 1:-72501976 None:intergenic
TGCAGCTTGGAGATCTGAAC+AGG 0.449022 1:+72502551 MsG0180004050.01.T01:CDS
CTGTTGGGCTTGTCGAGACT+GGG 0.450476 1:-72502649 None:intergenic
GGCGGAATGGGTGGTTATCA+AGG 0.451686 1:+72501886 MsG0180004050.01.T01:CDS
GGCTATGGCTCTATGGGTTA+CGG 0.452769 1:+72502216 MsG0180004050.01.T01:CDS
GCTATATGGGCAGTGGCTAT+GGG 0.453617 1:+72502499 MsG0180004050.01.T01:CDS
CTCCCAAAGGATGCCAATCC+TGG 0.453968 1:+72501826 MsG0180004050.01.T01:CDS
TTATATTTCACCTTATATGA+TGG 0.456373 1:+72502995 MsG0180004050.01.T01:three_prime_UTR
CCAGTGCAGCGGCTGGATAT+GGG 0.457614 1:+72502307 MsG0180004050.01.T01:CDS
TGGTAATTATGGGACTCCTC+AGG 0.457704 1:+72502584 MsG0180004050.01.T01:CDS
CTTATGCTGGTGGTGGCCCA+AGG 0.460869 1:+72502166 MsG0180004050.01.T01:CDS
CATACTACTTATTATAAACT+AGG 0.461228 1:-72502848 None:intergenic
CTTGGTTATGGTGCAGCATA+TGG 0.461527 1:+72502066 MsG0180004050.01.T01:CDS
GGTGGCAGTGGCAGCTATAT+GGG 0.464849 1:+72502486 MsG0180004050.01.T01:CDS
GGGACTCCTCAGGGAAATGG+GGG 0.464934 1:+72502594 MsG0180004050.01.T01:CDS
AAAGGAATGGATTCGGATCA+AGG 0.465987 1:+72500152 MsG0180004050.01.T01:exon
GATCTGGAAACTCCAATTCT+GGG 0.470761 1:+72501554 MsG0180004050.01.T01:CDS
GATAATTCTTATGGGAATCC+AGG 0.473239 1:+72502378 MsG0180004050.01.T01:CDS
TGGGACTCCTCAGGGAAATG+GGG 0.473876 1:+72502593 MsG0180004050.01.T01:CDS
AGAGAGAAGTTGAGGATTTG+GGG 0.479079 1:-72500037 None:intergenic
CCTTATGGATCCTCTGCTTA+CGG 0.480491 1:+72502003 MsG0180004050.01.T01:CDS
ACAAATGGAAATTCTGGGTA+TGG 0.484706 1:+72502525 MsG0180004050.01.T01:CDS
GAAGAGGGTTTCGAGGGTTG+TGG 0.485333 1:-72499975 None:intergenic
ACGGCTATTTGCACCAGGAT+TGG 0.486166 1:-72501839 None:intergenic
GTCCCTAATGCTGCTTATGC+TGG 0.490213 1:+72502153 MsG0180004050.01.T01:CDS
GGTTCGGCTAGCAATGGCCT+TGG 0.491314 1:+72502048 MsG0180004050.01.T01:CDS
CAATCTCCCAGTGCAGCGGC+TGG 0.493261 1:+72502300 MsG0180004050.01.T01:CDS
AACCCTATCAACTGCCTCCT+CGG 0.494485 1:-72501749 None:intergenic
ATGCAGCCTCAAAGTGCTGC+AGG 0.496615 1:+72501970 MsG0180004050.01.T01:CDS
ACGGTGCTGCTGCTGGATAT+GGG 0.503532 1:+72502022 MsG0180004050.01.T01:CDS
AGTTATGGTGGTGCCGCTGC+TGG 0.506490 1:+72502090 MsG0180004050.01.T01:CDS
GGGACACAAATGGAAATTCT+GGG 0.506783 1:+72502520 MsG0180004050.01.T01:CDS
AGTGGCTATGGGGACACAAA+TGG 0.508337 1:+72502510 MsG0180004050.01.T01:CDS
CCAGATCCAGCACCACCACT+TGG 0.509006 1:-72502261 None:intergenic
TCCTGGTGCAAATAGCCGTA+TGG 0.510146 1:+72501843 MsG0180004050.01.T01:CDS
GGTTATGGCGGCGGGTATGG+TGG 0.511710 1:+72502351 MsG0180004050.01.T01:CDS
GGATCTGGTGCAGCAACTGC+AGG 0.512933 1:+72502276 MsG0180004050.01.T01:CDS
CGTATGGGTGGTGCTGGAGG+TGG 0.515469 1:+72501859 MsG0180004050.01.T01:CDS
TACCGAGGAGGCAGTTGATA+GGG 0.519939 1:+72501747 MsG0180004050.01.T01:CDS
GGTGTATATGGTGCTGTTGG+TGG 0.522591 1:+72502399 MsG0180004050.01.T01:CDS
GGTGGTAGTGGCGGAATGGG+TGG 0.522676 1:+72501877 MsG0180004050.01.T01:CDS
GATCTCGAAGAGACAGAAAT+CGG 0.523559 1:-72501535 None:intergenic
GGATATGGGAATCAAGGTTA+CGG 0.523834 1:+72502321 MsG0180004050.01.T01:CDS
CCATATCCAGCCGCTGCACT+GGG 0.523919 1:-72502306 None:intergenic
GTTCGATCTTCATACACAAT+GGG 0.524290 1:+72502780 MsG0180004050.01.T01:three_prime_UTR
GCTGCTGCTGGATATGGGTA+TGG 0.524368 1:+72502027 MsG0180004050.01.T01:CDS
GGAAACTCCAATTCTGGGAA+TGG 0.526118 1:+72501559 MsG0180004050.01.T01:CDS
GGTGCAGCATATGGAAGTTA+TGG 0.528477 1:+72502075 MsG0180004050.01.T01:CDS
TGCTGGATATGGGTATGGTT+CGG 0.529889 1:+72502032 MsG0180004050.01.T01:CDS
AATAGCCGTATGGGTGGTGC+TGG 0.531723 1:+72501853 MsG0180004050.01.T01:CDS
ATGTTGTAAGATTAACAGGC+AGG 0.532298 1:-72502721 None:intergenic
GGTAGTGAACTGCAAGGTAG+TGG 0.533329 1:+72502465 MsG0180004050.01.T01:CDS
CCCATACGGCTATTTGCACC+AGG 0.534366 1:-72501844 None:intergenic
AAAGAGGAAGAGGGTTTCGA+GGG 0.534370 1:-72499981 None:intergenic
GACCTGCTGCTGCAACATAT+GGG 0.536151 1:+72502121 MsG0180004050.01.T01:CDS
ATGGGTGGTTATCAAGGGTA+TGG 0.538262 1:+72501892 MsG0180004050.01.T01:CDS
AAGAAGAATAAAGAGGAAGA+GGG 0.539559 1:-72499990 None:intergenic
CCTTGGGGTGCTCCAAGTGG+TGG 0.539752 1:+72502249 MsG0180004050.01.T01:CDS
GGTGCTGGAGGTGGTAGTGG+CGG 0.542113 1:+72501868 MsG0180004050.01.T01:CDS
TTTCATCGGTGGGATTTCAT+GGG 0.547867 1:+72500181 MsG0180004050.01.T01:CDS
GGTTATGGTGGTGGCTATGG+TGG 0.548099 1:+72502624 MsG0180004050.01.T01:CDS
GGTAATTATGGGACTCCTCA+GGG 0.549138 1:+72502585 MsG0180004050.01.T01:CDS
GGATATGGTGGTTATGGCGG+CGG 0.549502 1:+72502342 MsG0180004050.01.T01:CDS
CCAGGTGTATATGGTGCTGT+TGG 0.550786 1:+72502396 MsG0180004050.01.T01:CDS
GCGGCTGGATATGGGAATCA+AGG 0.551018 1:+72502315 MsG0180004050.01.T01:CDS
AATGCTGCTTATGCTGGTGG+TGG 0.553175 1:+72502159 MsG0180004050.01.T01:CDS
AACTCCAATTCTGGGAATGG+TGG 0.554277 1:+72501562 MsG0180004050.01.T01:CDS
AATAGTAATGCTAGTGGTCA+GGG 0.554643 1:+72502441 MsG0180004050.01.T01:CDS
GAGAGAAGTTGAGGATTTGG+GGG 0.555399 1:-72500036 None:intergenic
ATCTTCATACACAATGGGAC+TGG 0.556448 1:+72502785 MsG0180004050.01.T01:three_prime_UTR
GTGTATATGGTGCTGTTGGT+GGG 0.561548 1:+72502400 MsG0180004050.01.T01:CDS
CCTGGTGCAAATAGCCGTAT+GGG 0.563282 1:+72501844 MsG0180004050.01.T01:CDS
CTGGGTATGGAAATGCAGCT+TGG 0.563448 1:+72502538 MsG0180004050.01.T01:CDS
AGCAGCAGCACCGTAAGCAG+AGG 0.566324 1:-72502013 None:intergenic
GGACTCCTCAGGGAAATGGG+GGG 0.568599 1:+72502595 MsG0180004050.01.T01:CDS
AGCCGTATGGGTGGTGCTGG+AGG 0.570725 1:+72501856 MsG0180004050.01.T01:CDS
CCTAATGCTGCTTATGCTGG+TGG 0.574642 1:+72502156 MsG0180004050.01.T01:CDS
TACGGTAACGCTGCTCCTTG+GGG 0.578018 1:+72502234 MsG0180004050.01.T01:CDS
CAAGGGTATGGAGCTTCTGG+TGG 0.579903 1:+72501904 MsG0180004050.01.T01:CDS
CCGTAAGCAGAGGATCCATA+AGG 0.580853 1:-72502003 None:intergenic
CTCTGTATATGAGAGAGAAG+AGG 0.586076 1:-72499952 None:intergenic
ATGGTCGTTCAGATTCTAGT+AGG 0.588507 1:+72501944 MsG0180004050.01.T01:CDS
GCGGAATGGGTGGTTATCAA+GGG 0.588939 1:+72501887 MsG0180004050.01.T01:CDS
TTTAAATGGTAAACAAGTAG+AGG 0.589277 1:+72501792 MsG0180004050.01.T01:CDS
TATTCAGGTTGATGCCAAGA+GGG 0.591422 1:+72501492 MsG0180004050.01.T01:intron
CGTTCGATCTTCATACACAA+TGG 0.595847 1:+72502779 MsG0180004050.01.T01:three_prime_UTR
TCGAAGAGACAGAAATCGGT+TGG 0.596694 1:-72501531 None:intergenic
CATAAGCCTCAAAGTACTGA+CGG 0.596705 1:-72501648 None:intergenic
AGTGGCAGCTATATGGGCAG+TGG 0.597675 1:+72502492 MsG0180004050.01.T01:CDS
AGAACCCTATCAAGAACAGA+AGG 0.599565 1:-72500326 None:intergenic
GATTTCATGGGATACGAATG+AGG 0.601256 1:+72500193 MsG0180004050.01.T01:CDS
CTGCAAGGTAGTGGTGGCAG+TGG 0.601333 1:+72502474 MsG0180004050.01.T01:CDS
CCCATAGAGCCATAGCCAGA+GGG 0.602657 1:-72502210 None:intergenic
CCAACAGCACCATATACACC+TGG 0.603562 1:-72502396 None:intergenic
GGAAACCAAAATGCATATGA+TGG 0.603835 1:+72501925 MsG0180004050.01.T01:CDS
GGGTATGGTTCGGCTAGCAA+TGG 0.604135 1:+72502042 MsG0180004050.01.T01:CDS
AGGTCCGCCATAACCAGCAG+CGG 0.609069 1:-72502103 None:intergenic
TAAGCAGAGGATCCATAAGG+TGG 0.611830 1:-72502000 None:intergenic
CCACCACTTGGAGCACCCCA+AGG 0.612791 1:-72502249 None:intergenic
CACCTCCAGCACCACCCATA+CGG 0.615756 1:-72501858 None:intergenic
TACGGATATGGTGGTTATGG+CGG 0.616171 1:+72502339 MsG0180004050.01.T01:CDS
ACCACGAAACCAAAGCCTCT+AGG 0.617911 1:-72500293 None:intergenic
GATATGGTGGTTATGGCGGC+GGG 0.619574 1:+72502343 MsG0180004050.01.T01:CDS
CAGCCTCAAAGTGCTGCAGG+TGG 0.620843 1:+72501973 MsG0180004050.01.T01:CDS
TGTTGTAAGATTAACAGGCA+GGG 0.621951 1:-72502720 None:intergenic
CAAGAGGGCTTTCTCAAGAG+AGG 0.622387 1:+72501507 MsG0180004050.01.T01:CDS
GCTCCTTGGGGTGCTCCAAG+TGG 0.623958 1:+72502246 MsG0180004050.01.T01:CDS
GGTAAAGCGTGCACTCCCAA+AGG 0.624619 1:+72501813 MsG0180004050.01.T01:CDS
ACCCATAGAGCCATAGCCAG+AGG 0.625073 1:-72502211 None:intergenic
GGTGCCGCTGCTGGTTATGG+CGG 0.629283 1:+72502099 MsG0180004050.01.T01:CDS
CTTACAATGATTTCTTTCAG+CGG 0.634196 1:+72502747 MsG0180004050.01.T01:three_prime_UTR
GTTATGAGAGAGAAGAACAC+TGG 0.642068 1:+72500266 MsG0180004050.01.T01:CDS
TTATTCAGGTTGATGCCAAG+AGG 0.644453 1:+72501491 MsG0180004050.01.T01:intron
ACATGTTATTGATGGCAGAA+CGG 0.646515 1:+72500358 MsG0180004050.01.T01:CDS
AATCAAGGTTACGGATATGG+TGG 0.649710 1:+72502330 MsG0180004050.01.T01:CDS
TACGAATGAGGAGAAGCTGA+AGG 0.650828 1:+72500205 MsG0180004050.01.T01:CDS
AGGTCAATCTCCCAGTGCAG+CGG 0.652350 1:+72502296 MsG0180004050.01.T01:CDS
CTATATGGGCAGTGGCTATG+GGG 0.656547 1:+72502500 MsG0180004050.01.T01:CDS
GCTCCAAATAGTAATGCTAG+TGG 0.658443 1:+72502435 MsG0180004050.01.T01:CDS
AAGCAGAGGATCCATAAGGT+GGG 0.660176 1:-72501999 None:intergenic
CATATGCTGCACCATAACCA+AGG 0.663627 1:-72502065 None:intergenic
AGTGAACTGCAAGGTAGTGG+TGG 0.666951 1:+72502468 MsG0180004050.01.T01:CDS
CAAAATACTGGACGACCACG+AGG 0.670177 1:+72501703 MsG0180004050.01.T01:CDS
GCAGCATATGGAAGTTATGG+TGG 0.673073 1:+72502078 MsG0180004050.01.T01:CDS
GTTCTTCTCTCTCATAACAG+AGG 0.676722 1:-72500261 None:intergenic
CAGGGTGGTAGTGAACTGCA+AGG 0.689901 1:+72502459 MsG0180004050.01.T01:CDS
GGTGCAAATAGCCGTATGGG+TGG 0.691605 1:+72501847 MsG0180004050.01.T01:CDS
AGTAATGCTAGTGGTCAGGG+TGG 0.707479 1:+72502444 MsG0180004050.01.T01:CDS
AAGAACACTGGTAAACCTAG+AGG 0.711338 1:+72500278 MsG0180004050.01.T01:CDS
GTAATAAACCCAAATCCTCG+TGG 0.717165 1:-72501718 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTTGTTTAAAAATT+TGG + Chr1:72500464-72500483 MsG0180004050.01.T01:intron 10.0%
!!! TATAAAAATTGGGTTTTTAA+TGG - Chr1:72500075-72500094 None:intergenic 15.0%
!!! TCTGTTTCATTTAATATTTT+CGG - Chr1:72501173-72501192 None:intergenic 15.0%
!! AAAGTATAATGTTTCACTTT+GGG + Chr1:72501062-72501081 MsG0180004050.01.T01:intron 20.0%
!! AAGACATTTCATGATTTAAA+TGG + Chr1:72501778-72501797 MsG0180004050.01.T01:CDS 20.0%
!! AGGATTTAAATAGATTGTAT+CGG + Chr1:72501031-72501050 MsG0180004050.01.T01:intron 20.0%
!! CATACTACTTATTATAAACT+AGG - Chr1:72502851-72502870 None:intergenic 20.0%
!! CTAGTTTATAATAAGTAGTA+TGG + Chr1:72502849-72502868 MsG0180004050.01.T01:three_prime_UTR 20.0%
!! TAAAGTATAATGTTTCACTT+TGG + Chr1:72501061-72501080 MsG0180004050.01.T01:intron 20.0%
!! TTATATTTCACCTTATATGA+TGG + Chr1:72502995-72503014 MsG0180004050.01.T01:three_prime_UTR 20.0%
!!! ATGTTGTAATTTTGTTATTC+AGG + Chr1:72501477-72501496 MsG0180004050.01.T01:intron 20.0%
!!! GTTTTCATTGTAATTTTTGT+GGG + Chr1:72500605-72500624 MsG0180004050.01.T01:intron 20.0%
!!! TTTGTTTTGTTCAATTGTAA+AGG + Chr1:72500633-72500652 MsG0180004050.01.T01:intron 20.0%
!!! TTTGTTTTGTTTAAAGATCA+AGG + Chr1:72500542-72500561 MsG0180004050.01.T01:intron 20.0%
! AAATTACAACATTGCTAGTT+AGG - Chr1:72501469-72501488 None:intergenic 25.0%
! AAGATTAAATGTTGCATCAT+TGG + Chr1:72500910-72500929 MsG0180004050.01.T01:intron 25.0%
! AGAACCAAAAAGATATTTGT+TGG + Chr1:72501592-72501611 MsG0180004050.01.T01:CDS 25.0%
! GCTTTATATATGCAATAAGA+AGG - Chr1:72501151-72501170 None:intergenic 25.0%
! TATTGTGTAATAGAATTGAG+CGG + Chr1:72500831-72500850 MsG0180004050.01.T01:intron 25.0%
! TTTAAATGGTAAACAAGTAG+AGG + Chr1:72501792-72501811 MsG0180004050.01.T01:CDS 25.0%
!! AAGTTTTTACAGCAAACAAA+AGG - Chr1:72500877-72500896 None:intergenic 25.0%
!! AGATTGTTTATTCCTGTTTT+TGG + Chr1:72500500-72500519 MsG0180004050.01.T01:intron 25.0%
!! ATATTTTTCCATTGTGGAAT+AGG + Chr1:72500978-72500997 MsG0180004050.01.T01:intron 25.0%
!! ATGCAACATTTAATCTTTTC+AGG - Chr1:72500907-72500926 None:intergenic 25.0%
!! GGTTTTCATTGTAATTTTTG+TGG + Chr1:72500604-72500623 MsG0180004050.01.T01:intron 25.0%
!!! AAAGATCAAGGCTTTAATTT+TGG + Chr1:72500554-72500573 MsG0180004050.01.T01:intron 25.0%
!!! AAGATCAAGGCTTTAATTTT+GGG + Chr1:72500555-72500574 MsG0180004050.01.T01:intron 25.0%
!!! AGTTTTAAATTGCGTGTTTA+TGG + Chr1:72502923-72502942 MsG0180004050.01.T01:three_prime_UTR 25.0%
!!! GAGACTAATTAATTTGTTCA+TGG + Chr1:72500757-72500776 MsG0180004050.01.T01:intron 25.0%
!!! TAATGGATATTTTTCCATTG+TGG + Chr1:72500972-72500991 MsG0180004050.01.T01:intron 25.0%
!!! TTATTTTTCCATTGTGGAAT+AGG + Chr1:72500944-72500963 MsG0180004050.01.T01:intron 25.0%
AAGAAGAATAAAGAGGAAGA+GGG - Chr1:72499993-72500012 None:intergenic 30.0%
AAGCTACATATGTTTATGAC+AGG + Chr1:72501327-72501346 MsG0180004050.01.T01:intron 30.0%
ACTATCAAAATTACTGCTGT+TGG - Chr1:72502668-72502687 None:intergenic 30.0%
ATAACCCTAACATAGGTAAA+AGG - Chr1:72500431-72500450 None:intergenic 30.0%
CTATCAAAATTACTGCTGTT+GGG - Chr1:72502667-72502686 None:intergenic 30.0%
CTTACAATGATTTCTTTCAG+CGG + Chr1:72502747-72502766 MsG0180004050.01.T01:three_prime_UTR 30.0%
GAAGAAGAAGAAGAATAAAG+AGG - Chr1:72500000-72500019 None:intergenic 30.0%
GAAGACAAACATGTTATTGA+TGG + Chr1:72500350-72500369 MsG0180004050.01.T01:CDS 30.0%
GTGGAAGTGATAATTCTTAT+GGG + Chr1:72502370-72502389 MsG0180004050.01.T01:CDS 30.0%
TAACCCTAACATAGGTAAAA+GGG - Chr1:72500430-72500449 None:intergenic 30.0%
TATGCAATAAGAAGGATTTC+AGG - Chr1:72501143-72501162 None:intergenic 30.0%
TTAGGCTTATAATCGATAGT+GGG - Chr1:72501451-72501470 None:intergenic 30.0%
TTAGTATACCTATTCCACAA+TGG - Chr1:72500955-72500974 None:intergenic 30.0%
TTGTGGAATAGGTATACTAA+TGG + Chr1:72500955-72500974 MsG0180004050.01.T01:intron 30.0%
! ACCAAAAAGATATTTGTTGG+AGG + Chr1:72501595-72501614 MsG0180004050.01.T01:CDS 30.0%
! ATACCCTTTTACCTATGTTA+GGG + Chr1:72500424-72500443 MsG0180004050.01.T01:intron 30.0%
! CCAAAAAGATATTTGTTGGA+GGG + Chr1:72501596-72501615 MsG0180004050.01.T01:CDS 30.0%
! TATACCCTTTTACCTATGTT+AGG + Chr1:72500423-72500442 MsG0180004050.01.T01:intron 30.0%
! TCATTGTAATTTTTGTGGGT+GGG + Chr1:72500609-72500628 MsG0180004050.01.T01:intron 30.0%
! TTCATTGTAATTTTTGTGGG+TGG + Chr1:72500608-72500627 MsG0180004050.01.T01:intron 30.0%
! TTGATAGTTAAATCTCTTGC+TGG + Chr1:72502680-72502699 MsG0180004050.01.T01:three_prime_UTR 30.0%
! TTTTATGAGCTGTTTATCGA+TGG + Chr1:72500697-72500716 MsG0180004050.01.T01:intron 30.0%
!! AGATCAAGGCTTTAATTTTG+GGG + Chr1:72500556-72500575 MsG0180004050.01.T01:intron 30.0%
!! GGTACATTATTTTTCCATTG+TGG + Chr1:72500938-72500957 MsG0180004050.01.T01:intron 30.0%
!! GTTTATTACTTTTGATACCG+AGG + Chr1:72501732-72501751 MsG0180004050.01.T01:CDS 30.0%
!!! GTTTATGGTTTTAGTTGATC+TGG + Chr1:72502938-72502957 MsG0180004050.01.T01:three_prime_UTR 30.0%
AAAATTCCGTCAGTACTTTG+AGG + Chr1:72501642-72501661 MsG0180004050.01.T01:CDS 35.0%
AAATAGTAATGCTAGTGGTC+AGG + Chr1:72502440-72502459 MsG0180004050.01.T01:CDS 35.0%
AATAGTAATGCTAGTGGTCA+GGG + Chr1:72502441-72502460 MsG0180004050.01.T01:CDS 35.0%
ACAAATGGAAATTCTGGGTA+TGG + Chr1:72502525-72502544 MsG0180004050.01.T01:CDS 35.0%
AGAAGGATTTCAGGAAAACA+AGG - Chr1:72501134-72501153 None:intergenic 35.0%
AGAGAGTAAGAGAGAGAAAA+AGG + Chr1:72500134-72500153 MsG0180004050.01.T01:five_prime_UTR 35.0%
AGATCCTTCTGTTCTTGATA+GGG + Chr1:72500322-72500341 MsG0180004050.01.T01:CDS 35.0%
ATGTTGTAAGATTAACAGGC+AGG - Chr1:72502724-72502743 None:intergenic 35.0%
CATTCACATAACCCTAACAT+AGG - Chr1:72500438-72500457 None:intergenic 35.0%
CTCAAGCATCTGGTAATTAT+GGG + Chr1:72502574-72502593 MsG0180004050.01.T01:CDS 35.0%
CTGCATCAAACCATCATATA+AGG - Chr1:72503008-72503027 None:intergenic 35.0%
GAAGAAGAATAAAGAGGAAG+AGG - Chr1:72499994-72500013 None:intergenic 35.0%
GATAATTCTTATGGGAATCC+AGG + Chr1:72502378-72502397 MsG0180004050.01.T01:CDS 35.0%
GCTCATGTTGTAAGATTAAC+AGG - Chr1:72502728-72502747 None:intergenic 35.0%
GGAAACCAAAATGCATATGA+TGG + Chr1:72501925-72501944 MsG0180004050.01.T01:CDS 35.0%
GGTGGAAGTGATAATTCTTA+TGG + Chr1:72502369-72502388 MsG0180004050.01.T01:CDS 35.0%
GTAAGAGAGAGAAAAAGGAA+TGG + Chr1:72500139-72500158 MsG0180004050.01.T01:exon 35.0%
GTCATGTATGACCAAAATAC+TGG + Chr1:72501691-72501710 MsG0180004050.01.T01:CDS 35.0%
GTTAGGCTTATAATCGATAG+TGG - Chr1:72501452-72501471 None:intergenic 35.0%
GTTCGATCTTCATACACAAT+GGG + Chr1:72502780-72502799 MsG0180004050.01.T01:three_prime_UTR 35.0%
TCCAATTCACAACCAAAAAC+AGG - Chr1:72500515-72500534 None:intergenic 35.0%
TGACCACTAGCATTACTATT+TGG - Chr1:72502441-72502460 None:intergenic 35.0%
TGTTGTAAGATTAACAGGCA+GGG - Chr1:72502723-72502742 None:intergenic 35.0%
TTTACAGCAAACAAAAGGCA+GGG - Chr1:72500872-72500891 None:intergenic 35.0%
! AACGACCATCATATGCATTT+TGG - Chr1:72501933-72501952 None:intergenic 35.0%
! AATGTTGCATCATTGGTTGT+AGG + Chr1:72500917-72500936 MsG0180004050.01.T01:intron 35.0%
! AATTTTTCTTCAGCCAGAGT+GGG - Chr1:72501628-72501647 None:intergenic 35.0%
! ACATGTTATTGATGGCAGAA+CGG + Chr1:72500358-72500377 MsG0180004050.01.T01:CDS 35.0%
! CATTGTAATTTTTGTGGGTG+GGG + Chr1:72500610-72500629 MsG0180004050.01.T01:intron 35.0%
! CCCTCCAACAAATATCTTTT+TGG - Chr1:72501599-72501618 None:intergenic 35.0%
! GAGAGAAAAAGGAATGGATT+CGG + Chr1:72500145-72500164 MsG0180004050.01.T01:exon 35.0%
! GATCAAGGAAAGCTTTTCAT+CGG + Chr1:72500167-72500186 MsG0180004050.01.T01:CDS 35.0%
! TTTTACAGCAAACAAAAGGC+AGG - Chr1:72500873-72500892 None:intergenic 35.0%
!! AAGGAGCATTTCAGCAATTA+TGG + Chr1:72500224-72500243 MsG0180004050.01.T01:CDS 35.0%
!! ATCAAGGCTTTAATTTTGGG+GGG + Chr1:72500558-72500577 MsG0180004050.01.T01:intron 35.0%
!! GATCAAGGCTTTAATTTTGG+GGG + Chr1:72500557-72500576 MsG0180004050.01.T01:intron 35.0%
!! TATTACTTTTGATACCGAGG+AGG + Chr1:72501735-72501754 MsG0180004050.01.T01:CDS 35.0%
!! TTATAATCGATAGTGGGAAC+TGG - Chr1:72501445-72501464 None:intergenic 35.0%
!!! GGTTTTAGTTGATCTGGATT+TGG + Chr1:72502944-72502963 MsG0180004050.01.T01:three_prime_UTR 35.0%
!!! TCCTGTTTTTGGTTGTGAAT+TGG + Chr1:72500511-72500530 MsG0180004050.01.T01:intron 35.0%
!!! TGTTTTTGGTTGTGAATTGG+AGG + Chr1:72500514-72500533 MsG0180004050.01.T01:intron 35.0%
AAGAACACTGGTAAACCTAG+AGG + Chr1:72500278-72500297 MsG0180004050.01.T01:CDS 40.0%
AAGCAGCATTAGGGACATTT+GGG - Chr1:72502149-72502168 None:intergenic 40.0%
AATCAAGGTTACGGATATGG+TGG + Chr1:72502330-72502349 MsG0180004050.01.T01:CDS 40.0%
ACTGGAAGTAAAGCAAACAC+AGG - Chr1:72501427-72501446 None:intergenic 40.0%
AGAACCCTATCAAGAACAGA+AGG - Chr1:72500329-72500348 None:intergenic 40.0%
AGAGAGAAGTTGAGGATTTG+GGG - Chr1:72500040-72500059 None:intergenic 40.0%
AGAGAGAGAAGTTGAGGATT+TGG - Chr1:72500042-72500061 None:intergenic 40.0%
AGATCTGGAAACTCCAATTC+TGG + Chr1:72501553-72501572 MsG0180004050.01.T01:CDS 40.0%
AGGAGATACCTATTCCACAA+TGG - Chr1:72500989-72501008 None:intergenic 40.0%
ATAGGTATCTCCTTGGTTGT+AGG + Chr1:72500996-72501015 MsG0180004050.01.T01:intron 40.0%
ATCTTCATACACAATGGGAC+TGG + Chr1:72502785-72502804 MsG0180004050.01.T01:three_prime_UTR 40.0%
ATGGTCGTTCAGATTCTAGT+AGG + Chr1:72501944-72501963 MsG0180004050.01.T01:CDS 40.0%
ATTTCCACCATTCCCAGAAT+TGG - Chr1:72501569-72501588 None:intergenic 40.0%
ATTTCTGTCTCTTCGAGATC+TGG + Chr1:72501538-72501557 MsG0180004050.01.T01:CDS 40.0%
CACTAATGTACCTACAACCA+AGG - Chr1:72501009-72501028 None:intergenic 40.0%
CAGATCCTTCTGTTCTTGAT+AGG + Chr1:72500321-72500340 MsG0180004050.01.T01:CDS 40.0%
CGTTCGATCTTCATACACAA+TGG + Chr1:72502779-72502798 MsG0180004050.01.T01:three_prime_UTR 40.0%
CTCTGTATATGAGAGAGAAG+AGG - Chr1:72499955-72499974 None:intergenic 40.0%
CTGGAAGTAAAGCAAACACA+GGG - Chr1:72501426-72501445 None:intergenic 40.0%
GAGAGAGAAGTTGAGGATTT+GGG - Chr1:72500041-72500060 None:intergenic 40.0%
GATCTCGAAGAGACAGAAAT+CGG - Chr1:72501538-72501557 None:intergenic 40.0%
GATCTGGAAACTCCAATTCT+GGG + Chr1:72501554-72501573 MsG0180004050.01.T01:CDS 40.0%
GATTTCATGGGATACGAATG+AGG + Chr1:72500193-72500212 MsG0180004050.01.T01:CDS 40.0%
GCTCAAGCATCTGGTAATTA+TGG + Chr1:72502573-72502592 MsG0180004050.01.T01:CDS 40.0%
GCTCCAAATAGTAATGCTAG+TGG + Chr1:72502435-72502454 MsG0180004050.01.T01:CDS 40.0%
GGATATGGGAATCAAGGTTA+CGG + Chr1:72502321-72502340 MsG0180004050.01.T01:CDS 40.0%
GGGACACAAATGGAAATTCT+GGG + Chr1:72502520-72502539 MsG0180004050.01.T01:CDS 40.0%
GTAATAAACCCAAATCCTCG+TGG - Chr1:72501721-72501740 None:intergenic 40.0%
GTTATGAGAGAGAAGAACAC+TGG + Chr1:72500266-72500285 MsG0180004050.01.T01:CDS 40.0%
GTTCTTCTCTCTCATAACAG+AGG - Chr1:72500264-72500283 None:intergenic 40.0%
GTTGTAGGTACATTAGTGAC+AGG + Chr1:72501011-72501030 MsG0180004050.01.T01:intron 40.0%
TAAGCAGCATTAGGGACATT+TGG - Chr1:72502150-72502169 None:intergenic 40.0%
TATGGGAATCCAGGTGTATA+TGG + Chr1:72502387-72502406 MsG0180004050.01.T01:CDS 40.0%
TGTAATAGAATTGAGCGGTG+CGG + Chr1:72500836-72500855 MsG0180004050.01.T01:intron 40.0%
TTACAGCAAACAAAAGGCAG+GGG - Chr1:72500871-72500890 None:intergenic 40.0%
TTGTGGAATAGGTATCTCCT+TGG + Chr1:72500989-72501008 MsG0180004050.01.T01:intron 40.0%
TTTCATCGGTGGGATTTCAT+GGG + Chr1:72500181-72500200 MsG0180004050.01.T01:CDS 40.0%
TTTGGTTGTGAATTGGAGGT+GGG + Chr1:72500518-72500537 MsG0180004050.01.T01:intron 40.0%
! AAAGGAATGGATTCGGATCA+AGG + Chr1:72500152-72500171 MsG0180004050.01.T01:exon 40.0%
! AAGGAAAGCTTTTCATCGGT+GGG + Chr1:72500171-72500190 MsG0180004050.01.T01:CDS 40.0%
! ACACAACAGATCTAGCTTCA+AGG - Chr1:72501266-72501285 None:intergenic 40.0%
! CACTTTGGGAGAAGATACAT+TGG + Chr1:72501076-72501095 MsG0180004050.01.T01:intron 40.0%
! GAATTTTTCTTCAGCCAGAG+TGG - Chr1:72501629-72501648 None:intergenic 40.0%
! TTTTCATCGGTGGGATTTCA+TGG + Chr1:72500180-72500199 MsG0180004050.01.T01:CDS 40.0%
!! CATAAGCCTCAAAGTACTGA+CGG - Chr1:72501651-72501670 None:intergenic 40.0%
!! TATTCAGGTTGATGCCAAGA+GGG + Chr1:72501492-72501511 MsG0180004050.01.T01:intron 40.0%
!! TCAAGGCTTTAATTTTGGGG+GGG + Chr1:72500559-72500578 MsG0180004050.01.T01:intron 40.0%
!! TTATTCAGGTTGATGCCAAG+AGG + Chr1:72501491-72501510 MsG0180004050.01.T01:intron 40.0%
!! TTTTGGTTGTGAATTGGAGG+TGG + Chr1:72500517-72500536 MsG0180004050.01.T01:intron 40.0%
!!! GATTGCGTGTTTGGTTTTCT+AGG + Chr1:72500723-72500742 MsG0180004050.01.T01:intron 40.0%
AAAGAGGAAGAGGGTTTCGA+GGG - Chr1:72499984-72500003 None:intergenic 45.0%
AAGCAGAGGATCCATAAGGT+GGG - Chr1:72502002-72502021 None:intergenic 45.0%
ACTGGTAAACCTAGAGGCTT+TGG + Chr1:72500284-72500303 MsG0180004050.01.T01:CDS 45.0%
AGGATTTGGGGGTAGAAGAA+GGG - Chr1:72500028-72500047 None:intergenic 45.0%
AGTAAAGCAAACACAGGGTC+TGG - Chr1:72501421-72501440 None:intergenic 45.0%
ATGGGTGGTTATCAAGGGTA+TGG + Chr1:72501892-72501911 MsG0180004050.01.T01:CDS 45.0%
CACCAGCATAAGCAGCATTA+GGG - Chr1:72502158-72502177 None:intergenic 45.0%
CATATGCTGCACCATAACCA+AGG - Chr1:72502068-72502087 None:intergenic 45.0%
CCTTATGGATCCTCTGCTTA+CGG + Chr1:72502003-72502022 MsG0180004050.01.T01:CDS 45.0%
CTTGGTTATGGTGCAGCATA+TGG + Chr1:72502066-72502085 MsG0180004050.01.T01:CDS 45.0%
GAGAGAAGTTGAGGATTTGG+GGG - Chr1:72500039-72500058 None:intergenic 45.0%
GCAGCATATGGAAGTTATGG+TGG + Chr1:72502078-72502097 MsG0180004050.01.T01:CDS 45.0%
GGGAATCAAGGTTACGGATA+TGG + Chr1:72502327-72502346 MsG0180004050.01.T01:CDS 45.0%
GGGGACACAAATGGAAATTC+TGG + Chr1:72502519-72502538 MsG0180004050.01.T01:CDS 45.0%
GGTAATTATGGGACTCCTCA+GGG + Chr1:72502585-72502604 MsG0180004050.01.T01:CDS 45.0%
GGTGCAGCATATGGAAGTTA+TGG + Chr1:72502075-72502094 MsG0180004050.01.T01:CDS 45.0%
GGTTACGGATATGGTGGTTA+TGG + Chr1:72502336-72502355 MsG0180004050.01.T01:CDS 45.0%
GTAAAGCAAACACAGGGTCT+GGG - Chr1:72501420-72501439 None:intergenic 45.0%
TAAAGAGGAAGAGGGTTTCG+AGG - Chr1:72499985-72500004 None:intergenic 45.0%
TAAGCAGAGGATCCATAAGG+TGG - Chr1:72502003-72502022 None:intergenic 45.0%
TACGAATGAGGAGAAGCTGA+AGG + Chr1:72500205-72500224 MsG0180004050.01.T01:CDS 45.0%
TACGGATATGGTGGTTATGG+CGG + Chr1:72502339-72502358 MsG0180004050.01.T01:CDS 45.0%
TCGAAGAGACAGAAATCGGT+TGG - Chr1:72501534-72501553 None:intergenic 45.0%
TGCTGGATATGGGTATGGTT+CGG + Chr1:72502032-72502051 MsG0180004050.01.T01:CDS 45.0%
TGGTAATTATGGGACTCCTC+AGG + Chr1:72502584-72502603 MsG0180004050.01.T01:CDS 45.0%
! AACTCCAATTCTGGGAATGG+TGG + Chr1:72501562-72501581 MsG0180004050.01.T01:CDS 45.0%
! CAAGGAAAGCTTTTCATCGG+TGG + Chr1:72500170-72500189 MsG0180004050.01.T01:CDS 45.0%
! GGAAACTCCAATTCTGGGAA+TGG + Chr1:72501559-72501578 MsG0180004050.01.T01:CDS 45.0%
! GTTATTGATGGCAGAACGGT+CGG + Chr1:72500362-72500381 MsG0180004050.01.T01:intron 45.0%
! TATCAAGGGTATGGAGCTTC+TGG + Chr1:72501901-72501920 MsG0180004050.01.T01:CDS 45.0%
!! AAGGCTTTAATTTTGGGGGG+GGG + Chr1:72500561-72500580 MsG0180004050.01.T01:intron 45.0%
!! CAAGGCTTTAATTTTGGGGG+GGG + Chr1:72500560-72500579 MsG0180004050.01.T01:intron 45.0%
!! CGATGGATTGATTGCGTGTT+TGG + Chr1:72500714-72500733 MsG0180004050.01.T01:intron 45.0%
!! CGTCAGTACTTTGAGGCTTA+TGG + Chr1:72501649-72501668 MsG0180004050.01.T01:CDS 45.0%
!! GTGTATATGGTGCTGTTGGT+GGG + Chr1:72502400-72502419 MsG0180004050.01.T01:CDS 45.0%
!! ATATATAGATATATAAAAAT+TGG - Chr1:72500086-72500105 None:intergenic 5.0%
!! TATATAGATATATAAAAATT+GGG - Chr1:72500085-72500104 None:intergenic 5.0%
AACCCTATCAACTGCCTCCT+CGG - Chr1:72501752-72501771 None:intergenic 50.0%
AATCCACCTGCAGCACTTTG+AGG - Chr1:72501979-72501998 None:intergenic 50.0%
ACCACGAAACCAAAGCCTCT+AGG - Chr1:72500296-72500315 None:intergenic 50.0%
ACGGCTATTTGCACCAGGAT+TGG - Chr1:72501842-72501861 None:intergenic 50.0%
AGCTATATGGGCAGTGGCTA+TGG + Chr1:72502498-72502517 MsG0180004050.01.T01:CDS 50.0%
AGTAATGCTAGTGGTCAGGG+TGG + Chr1:72502444-72502463 MsG0180004050.01.T01:CDS 50.0%
AGTGGCTATGGGGACACAAA+TGG + Chr1:72502510-72502529 MsG0180004050.01.T01:CDS 50.0%
ATACCGAGGAGGCAGTTGAT+AGG + Chr1:72501746-72501765 MsG0180004050.01.T01:CDS 50.0%
ATGGGACTCCTCAGGGAAAT+GGG + Chr1:72502592-72502611 MsG0180004050.01.T01:CDS 50.0%
CAAAATACTGGACGACCACG+AGG + Chr1:72501703-72501722 MsG0180004050.01.T01:CDS 50.0%
CAAGAGGGCTTTCTCAAGAG+AGG + Chr1:72501507-72501526 MsG0180004050.01.T01:CDS 50.0%
CCAACAGCACCATATACACC+TGG - Chr1:72502399-72502418 None:intergenic 50.0%
CCACCAGCATAAGCAGCATT+AGG - Chr1:72502159-72502178 None:intergenic 50.0%
CCGTAAGCAGAGGATCCATA+AGG - Chr1:72502006-72502025 None:intergenic 50.0%
CCTGGTGCAAATAGCCGTAT+GGG + Chr1:72501844-72501863 MsG0180004050.01.T01:CDS 50.0%
CTATATGGGCAGTGGCTATG+GGG + Chr1:72502500-72502519 MsG0180004050.01.T01:CDS 50.0%
CTCTCTTGAGAAAGCCCTCT+TGG - Chr1:72501509-72501528 None:intergenic 50.0%
CTGGGTATGGAAATGCAGCT+TGG + Chr1:72502538-72502557 MsG0180004050.01.T01:CDS 50.0%
GACCTGCTGCTGCAACATAT+GGG + Chr1:72502121-72502140 MsG0180004050.01.T01:CDS 50.0%
GAGGATTTGGGGGTAGAAGA+AGG - Chr1:72500029-72500048 None:intergenic 50.0%
GCAGAGAGAGAGAGAAGTTG+AGG - Chr1:72500048-72500067 None:intergenic 50.0%
GCGGAATGGGTGGTTATCAA+GGG + Chr1:72501887-72501906 MsG0180004050.01.T01:CDS 50.0%
GCTATATGGGCAGTGGCTAT+GGG + Chr1:72502499-72502518 MsG0180004050.01.T01:CDS 50.0%
GGTAGTGAACTGCAAGGTAG+TGG + Chr1:72502465-72502484 MsG0180004050.01.T01:CDS 50.0%
TATGGGACTCCTCAGGGAAA+TGG + Chr1:72502591-72502610 MsG0180004050.01.T01:CDS 50.0%
TCCTGGTGCAAATAGCCGTA+TGG + Chr1:72501843-72501862 MsG0180004050.01.T01:CDS 50.0%
TCTGAACAGGCTCAAGCATC+TGG + Chr1:72502564-72502583 MsG0180004050.01.T01:CDS 50.0%
TGCAGCTTGGAGATCTGAAC+AGG + Chr1:72502551-72502570 MsG0180004050.01.T01:CDS 50.0%
TTACGGTAACGCTGCTCCTT+GGG + Chr1:72502233-72502252 MsG0180004050.01.T01:CDS 50.0%
TTCCCATATGTTGCAGCAGC+AGG - Chr1:72502126-72502145 None:intergenic 50.0%
! AATGCTGCTTATGCTGGTGG+TGG + Chr1:72502159-72502178 MsG0180004050.01.T01:CDS 50.0%
! ACCTAGAGGCTTTGGTTTCG+TGG + Chr1:72500292-72500311 MsG0180004050.01.T01:CDS 50.0%
! AGTGAACTGCAAGGTAGTGG+TGG + Chr1:72502468-72502487 MsG0180004050.01.T01:CDS 50.0%
! CACCAGGATTGGCATCCTTT+GGG - Chr1:72501831-72501850 None:intergenic 50.0%
! CCTAATGCTGCTTATGCTGG+TGG + Chr1:72502156-72502175 MsG0180004050.01.T01:CDS 50.0%
! CTCGTGGTCGTCCAGTATTT+TGG - Chr1:72501705-72501724 None:intergenic 50.0%
! GCTAGCAATGGCCTTGGTTA+TGG + Chr1:72502054-72502073 MsG0180004050.01.T01:CDS 50.0%
! GGCTATGGCTCTATGGGTTA+CGG + Chr1:72502216-72502235 MsG0180004050.01.T01:CDS 50.0%
! GTCCCTAATGCTGCTTATGC+TGG + Chr1:72502153-72502172 MsG0180004050.01.T01:CDS 50.0%
! TACCGAGGAGGCAGTTGATA+GGG + Chr1:72501747-72501766 MsG0180004050.01.T01:CDS 50.0%
! TTTTCTTCAGCCAGAGTGGG+AGG - Chr1:72501625-72501644 None:intergenic 50.0%
!! AGGCTTTAATTTTGGGGGGG+GGG + Chr1:72500562-72500581 MsG0180004050.01.T01:intron 50.0%
!! CCAGGTGTATATGGTGCTGT+TGG + Chr1:72502396-72502415 MsG0180004050.01.T01:CDS 50.0%
!! GGTGTATATGGTGCTGTTGG+TGG + Chr1:72502399-72502418 MsG0180004050.01.T01:CDS 50.0%
AAGGAGTTCATGGCCTGCTC+AGG + Chr1:72502185-72502204 MsG0180004050.01.T01:CDS 55.0%
AATAGCCGTATGGGTGGTGC+TGG + Chr1:72501853-72501872 MsG0180004050.01.T01:CDS 55.0%
AATGGGGGGCAAGCTGGTTA+TGG + Chr1:72502609-72502628 MsG0180004050.01.T01:CDS 55.0%
ACCCATAGAGCCATAGCCAG+AGG - Chr1:72502214-72502233 None:intergenic 55.0%
ACTGGACGACCACGAGGATT+TGG + Chr1:72501709-72501728 MsG0180004050.01.T01:CDS 55.0%
AGGTCAATCTCCCAGTGCAG+CGG + Chr1:72502296-72502315 MsG0180004050.01.T01:CDS 55.0%
AGTGGCAGCTATATGGGCAG+TGG + Chr1:72502492-72502511 MsG0180004050.01.T01:CDS 55.0%
CCCATACGGCTATTTGCACC+AGG - Chr1:72501847-72501866 None:intergenic 55.0%
CCCATAGAGCCATAGCCAGA+GGG - Chr1:72502213-72502232 None:intergenic 55.0%
CTCCCAAAGGATGCCAATCC+TGG + Chr1:72501826-72501845 MsG0180004050.01.T01:CDS 55.0%
CTGGACGACCACGAGGATTT+GGG + Chr1:72501710-72501729 MsG0180004050.01.T01:CDS 55.0%
CTGTTGGGCTTGTCGAGACT+GGG - Chr1:72502652-72502671 None:intergenic 55.0%
GAAGAGGGTTTCGAGGGTTG+TGG - Chr1:72499978-72499997 None:intergenic 55.0%
GAGCAGGCCATGAACTCCTT+GGG - Chr1:72502185-72502204 None:intergenic 55.0%
GATATGGTGGTTATGGCGGC+GGG + Chr1:72502343-72502362 MsG0180004050.01.T01:CDS 55.0%
GCGGCTGGATATGGGAATCA+AGG + Chr1:72502315-72502334 MsG0180004050.01.T01:CDS 55.0%
GCTGCTGCTGGATATGGGTA+TGG + Chr1:72502027-72502046 MsG0180004050.01.T01:CDS 55.0%
GGACCTGCTGCTGCAACATA+TGG + Chr1:72502120-72502139 MsG0180004050.01.T01:CDS 55.0%
GGATATGGTGGTTATGGCGG+CGG + Chr1:72502342-72502361 MsG0180004050.01.T01:CDS 55.0%
GGCGGAATGGGTGGTTATCA+AGG + Chr1:72501886-72501905 MsG0180004050.01.T01:CDS 55.0%
GGTAAAGCGTGCACTCCCAA+AGG + Chr1:72501813-72501832 MsG0180004050.01.T01:CDS 55.0%
GGTGCAAATAGCCGTATGGG+TGG + Chr1:72501847-72501866 MsG0180004050.01.T01:CDS 55.0%
GGTGGCAGTGGCAGCTATAT+GGG + Chr1:72502486-72502505 MsG0180004050.01.T01:CDS 55.0%
GTTACGGTAACGCTGCTCCT+TGG + Chr1:72502232-72502251 MsG0180004050.01.T01:CDS 55.0%
TACGGTAACGCTGCTCCTTG+GGG + Chr1:72502234-72502253 MsG0180004050.01.T01:CDS 55.0%
TGAGCAGGCCATGAACTCCT+TGG - Chr1:72502186-72502205 None:intergenic 55.0%
TGGGACTCCTCAGGGAAATG+GGG + Chr1:72502593-72502612 MsG0180004050.01.T01:CDS 55.0%
TGGTGGCAGTGGCAGCTATA+TGG + Chr1:72502485-72502504 MsG0180004050.01.T01:CDS 55.0%
! CAAGGGTATGGAGCTTCTGG+TGG + Chr1:72501904-72501923 MsG0180004050.01.T01:CDS 55.0%
! CAGGGTGGTAGTGAACTGCA+AGG + Chr1:72502459-72502478 MsG0180004050.01.T01:CDS 55.0%
! CCCTCTGGCTATGGCTCTAT+GGG + Chr1:72502210-72502229 MsG0180004050.01.T01:CDS 55.0%
! GCACCAGGATTGGCATCCTT+TGG - Chr1:72501832-72501851 None:intergenic 55.0%
! GCAGGTGGATTCCCACCTTA+TGG + Chr1:72501988-72502007 MsG0180004050.01.T01:CDS 55.0%
! GGGTATGGTTCGGCTAGCAA+TGG + Chr1:72502042-72502061 MsG0180004050.01.T01:CDS 55.0%
! TCCCTCTGGCTATGGCTCTA+TGG + Chr1:72502209-72502228 MsG0180004050.01.T01:CDS 55.0%
!! ACGGTGCTGCTGCTGGATAT+GGG + Chr1:72502022-72502041 MsG0180004050.01.T01:CDS 55.0%
!! ATGCAGCCTCAAAGTGCTGC+AGG + Chr1:72501970-72501989 MsG0180004050.01.T01:CDS 55.0%
!! CTTTAATTTTGGGGGGGGGG+GGG + Chr1:72500565-72500584 MsG0180004050.01.T01:intron 55.0%
!! GCTGGTTATGGTGGTGGCTA+TGG + Chr1:72502621-72502640 MsG0180004050.01.T01:CDS 55.0%
!! GCTTTAATTTTGGGGGGGGG+GGG + Chr1:72500564-72500583 MsG0180004050.01.T01:intron 55.0%
!! GGCTTTAATTTTGGGGGGGG+GGG + Chr1:72500563-72500582 MsG0180004050.01.T01:intron 55.0%
!! GGTTATGGTGGTGGCTATGG+TGG + Chr1:72502624-72502643 MsG0180004050.01.T01:CDS 55.0%
!! TACGGTGCTGCTGCTGGATA+TGG + Chr1:72502021-72502040 MsG0180004050.01.T01:CDS 55.0%
!! TTTAATTTTGGGGGGGGGGG+GGG + Chr1:72500566-72500585 MsG0180004050.01.T01:intron 55.0%
AGCAGCAGCACCGTAAGCAG+AGG - Chr1:72502016-72502035 None:intergenic 60.0%
AGGTCCGCCATAACCAGCAG+CGG - Chr1:72502106-72502125 None:intergenic 60.0%
CACCTCCAGCACCACCCATA+CGG - Chr1:72501861-72501880 None:intergenic 60.0%
CCAGATCCAGCACCACCACT+TGG - Chr1:72502264-72502283 None:intergenic 60.0%
CCAGTGCAGCGGCTGGATAT+GGG + Chr1:72502307-72502326 MsG0180004050.01.T01:CDS 60.0%
CCATATCCAGCCGCTGCACT+GGG - Chr1:72502309-72502328 None:intergenic 60.0%
GCTGTTGGGCTTGTCGAGAC+TGG - Chr1:72502653-72502672 None:intergenic 60.0%
GGACTCCTCAGGGAAATGGG+GGG + Chr1:72502595-72502614 MsG0180004050.01.T01:CDS 60.0%
GGATCTGGTGCAGCAACTGC+AGG + Chr1:72502276-72502295 MsG0180004050.01.T01:CDS 60.0%
GGGACTCCTCAGGGAAATGG+GGG + Chr1:72502594-72502613 MsG0180004050.01.T01:CDS 60.0%
GGGCAAGCTGGTTATGGTGG+TGG + Chr1:72502615-72502634 MsG0180004050.01.T01:CDS 60.0%
GGTTCGGCTAGCAATGGCCT+TGG + Chr1:72502048-72502067 MsG0180004050.01.T01:CDS 60.0%
GTGGTGGCCCAAGGAGTTCA+TGG + Chr1:72502175-72502194 MsG0180004050.01.T01:CDS 60.0%
! CCAAGTGGTGGTGCTGGATC+TGG + Chr1:72502261-72502280 MsG0180004050.01.T01:CDS 60.0%
! CTGCAAGGTAGTGGTGGCAG+TGG + Chr1:72502474-72502493 MsG0180004050.01.T01:CDS 60.0%
! GTGCTGTTGGTGGGCGTACT+GGG + Chr1:72502409-72502428 MsG0180004050.01.T01:CDS 60.0%
!! AGTTATGGTGGTGCCGCTGC+TGG + Chr1:72502090-72502109 MsG0180004050.01.T01:CDS 60.0%
!! CAGCCTCAAAGTGCTGCAGG+TGG + Chr1:72501973-72501992 MsG0180004050.01.T01:CDS 60.0%
!! CTTATGCTGGTGGTGGCCCA+AGG + Chr1:72502166-72502185 MsG0180004050.01.T01:CDS 60.0%
!! GGAGGTGGTAGTGGCGGAAT+GGG + Chr1:72501874-72501893 MsG0180004050.01.T01:CDS 60.0%
!! TCTGCTTACGGTGCTGCTGC+TGG + Chr1:72502015-72502034 MsG0180004050.01.T01:CDS 60.0%
!! TGGAGGTGGTAGTGGCGGAA+TGG + Chr1:72501873-72501892 MsG0180004050.01.T01:CDS 60.0%
!! TTAATTTTGGGGGGGGGGGG+GGG + Chr1:72500567-72500586 MsG0180004050.01.T01:intron 60.0%
CAATCTCCCAGTGCAGCGGC+TGG + Chr1:72502300-72502319 MsG0180004050.01.T01:CDS 65.0%
CAGGGAAATGGGGGGCAAGC+TGG + Chr1:72502603-72502622 MsG0180004050.01.T01:CDS 65.0%
CCCAGTGCAGCGGCTGGATA+TGG + Chr1:72502306-72502325 MsG0180004050.01.T01:CDS 65.0%
CCCATATCCAGCCGCTGCAC+TGG - Chr1:72502310-72502329 None:intergenic 65.0%
GCTCAGGCTCCCTCTGGCTA+TGG + Chr1:72502201-72502220 MsG0180004050.01.T01:CDS 65.0%
GCTTGCCCCCCATTTCCCTG+AGG - Chr1:72502603-72502622 None:intergenic 65.0%
GGGGGGCAAGCTGGTTATGG+TGG + Chr1:72502612-72502631 MsG0180004050.01.T01:CDS 65.0%
GGTGGTTATGGCGGCGGGTA+TGG + Chr1:72502348-72502367 MsG0180004050.01.T01:CDS 65.0%
GGTTATGGCGGCGGGTATGG+TGG + Chr1:72502351-72502370 MsG0180004050.01.T01:CDS 65.0%
TAGCCAGAGGGAGCCTGAGC+AGG - Chr1:72502201-72502220 None:intergenic 65.0%
TGGAGGGTTGCCTCCCACTC+TGG + Chr1:72501612-72501631 MsG0180004050.01.T01:CDS 65.0%
! AGCCGTATGGGTGGTGCTGG+AGG + Chr1:72501856-72501875 MsG0180004050.01.T01:CDS 65.0%
! CCACCACTTGGAGCACCCCA+AGG - Chr1:72502252-72502271 None:intergenic 65.0%
! CCTTGGGGTGCTCCAAGTGG+TGG + Chr1:72502249-72502268 MsG0180004050.01.T01:CDS 65.0%
! CGTATGGGTGGTGCTGGAGG+TGG + Chr1:72501859-72501878 MsG0180004050.01.T01:CDS 65.0%
! GCTCCTTGGGGTGCTCCAAG+TGG + Chr1:72502246-72502265 MsG0180004050.01.T01:CDS 65.0%
! GGTGCTCCAAGTGGTGGTGC+TGG + Chr1:72502255-72502274 MsG0180004050.01.T01:CDS 65.0%
! GGTGGTGCTGGAGGTGGTAG+TGG + Chr1:72501865-72501884 MsG0180004050.01.T01:CDS 65.0%
!! GGTGCCGCTGCTGGTTATGG+CGG + Chr1:72502099-72502118 MsG0180004050.01.T01:CDS 65.0%
!! GGTGCTGGAGGTGGTAGTGG+CGG + Chr1:72501868-72501887 MsG0180004050.01.T01:CDS 65.0%
!! GGTGCTGTTGGTGGGCGTAC+TGG + Chr1:72502408-72502427 MsG0180004050.01.T01:CDS 65.0%
!! GGTGGTAGTGGCGGAATGGG+TGG + Chr1:72501877-72501896 MsG0180004050.01.T01:CDS 65.0%
!! GGTGGTGCCGCTGCTGGTTA+TGG + Chr1:72502096-72502115 MsG0180004050.01.T01:CDS 65.0%
!! TAATTTTGGGGGGGGGGGGG+GGG + Chr1:72500568-72500587 MsG0180004050.01.T01:intron 65.0%
TGGCCTGCTCAGGCTCCCTC+TGG + Chr1:72502195-72502214 MsG0180004050.01.T01:CDS 70.0%
!! AATTTTGGGGGGGGGGGGGG+GGG + Chr1:72500569-72500588 MsG0180004050.01.T01:intron 70.0%
!! ATTTTGGGGGGGGGGGGGGG+GGG + Chr1:72500570-72500589 MsG0180004050.01.T01:intron 75.0%
!! GGGGGGGGGGGGGTGTTTAG+TGG + Chr1:72500583-72500602 MsG0180004050.01.T01:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG + Chr1:72500571-72500590 MsG0180004050.01.T01:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG + Chr1:72500572-72500591 MsG0180004050.01.T01:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + Chr1:72500573-72500592 MsG0180004050.01.T01:intron 90.0%
Chromosome Type Strat End Strand Name
Chr1 gene 72499934 72503027 72499934 ID=MsG0180004050.01;Name=MsG0180004050.01
Chr1 mRNA 72499934 72503027 72499934 ID=MsG0180004050.01.T01;Parent=MsG0180004050.01;Name=MsG0180004050.01.T01;_AED=0.49;_eAED=0.49;_QI=224|1|1|1|1|1|2|350|466
Chr1 exon 72499934 72500379 72499934 ID=MsG0180004050.01.T01:exon:31139;Parent=MsG0180004050.01.T01
Chr1 exon 72501499 72503027 72501499 ID=MsG0180004050.01.T01:exon:31140;Parent=MsG0180004050.01.T01
Chr1 five_prime_UTR 72499934 72500157 72499934 ID=MsG0180004050.01.T01:five_prime_utr;Parent=MsG0180004050.01.T01
Chr1 CDS 72500158 72500379 72500158 ID=MsG0180004050.01.T01:cds;Parent=MsG0180004050.01.T01
Chr1 CDS 72501499 72502677 72501499 ID=MsG0180004050.01.T01:cds;Parent=MsG0180004050.01.T01
Chr1 three_prime_UTR 72502678 72503027 72502678 ID=MsG0180004050.01.T01:three_prime_utr;Parent=MsG0180004050.01.T01
Gene Sequence

>MsG0180004050.01.T01

ATGGATTCGGATCAAGGAAAGCTTTTCATCGGTGGGATTTCATGGGATACGAATGAGGAGAAGCTGAAGGAGCATTTCAGCAATTATGGTGATGTATTGAACACCTCTGTTATGAGAGAGAAGAACACTGGTAAACCTAGAGGCTTTGGTTTCGTGGTTTTCTCAGATCCTTCTGTTCTTGATAGGGTTCTTGAAGACAAACATGTTATTGATGGCAGAACGGTTGATGCCAAGAGGGCTTTCTCAAGAGAGGACCAACCGATTTCTGTCTCTTCGAGATCTGGAAACTCCAATTCTGGGAATGGTGGAAATATGAGAACCAAAAAGATATTTGTTGGAGGGTTGCCTCCCACTCTGGCTGAAGAAAAATTCCGTCAGTACTTTGAGGCTTATGGACATGTAACTGATGTCGTAGTCATGTATGACCAAAATACTGGACGACCACGAGGATTTGGGTTTATTACTTTTGATACCGAGGAGGCAGTTGATAGGGTTTTGCACAAGACATTTCATGATTTAAATGGTAAACAAGTAGAGGTAAAGCGTGCACTCCCAAAGGATGCCAATCCTGGTGCAAATAGCCGTATGGGTGGTGCTGGAGGTGGTAGTGGCGGAATGGGTGGTTATCAAGGGTATGGAGCTTCTGGTGGAAACCAAAATGCATATGATGGTCGTTCAGATTCTAGTAGGTATATGCAGCCTCAAAGTGCTGCAGGTGGATTCCCACCTTATGGATCCTCTGCTTACGGTGCTGCTGCTGGATATGGGTATGGTTCGGCTAGCAATGGCCTTGGTTATGGTGCAGCATATGGAAGTTATGGTGGTGCCGCTGCTGGTTATGGCGGACCTGCTGCTGCAACATATGGGAACCCAAATGTCCCTAATGCTGCTTATGCTGGTGGTGGCCCAAGGAGTTCATGGCCTGCTCAGGCTCCCTCTGGCTATGGCTCTATGGGTTACGGTAACGCTGCTCCTTGGGGTGCTCCAAGTGGTGGTGCTGGATCTGGTGCAGCAACTGCAGGTCAATCTCCCAGTGCAGCGGCTGGATATGGGAATCAAGGTTACGGATATGGTGGTTATGGCGGCGGGTATGGTGGAAGTGATAATTCTTATGGGAATCCAGGTGTATATGGTGCTGTTGGTGGGCGTACTGGGAGTGCTCCAAATAGTAATGCTAGTGGTCAGGGTGGTAGTGAACTGCAAGGTAGTGGTGGCAGTGGCAGCTATATGGGCAGTGGCTATGGGGACACAAATGGAAATTCTGGGTATGGAAATGCAGCTTGGAGATCTGAACAGGCTCAAGCATCTGGTAATTATGGGACTCCTCAGGGAAATGGGGGGCAAGCTGGTTATGGTGGTGGCTATGGTGGCGCCCAGTCTCGACAAGCCCAACAGCAGTAA

Protein sequence

>MsG0180004050.01.T01

MDSDQGKLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRVLEDKHVIDGRTVDAKRAFSREDQPISVSSRSGNSNSGNGGNMRTKKIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGANSRMGGAGGGSGGMGGYQGYGASGGNQNAYDGRSDSSRYMQPQSAAGGFPPYGSSAYGAAAGYGYGSASNGLGYGAAYGSYGGAAAGYGGPAAATYGNPNVPNAAYAGGGPRSSWPAQAPSGYGSMGYGNAAPWGAPSGGAGSGAATAGQSPSAAAGYGNQGYGYGGYGGGYGGSDNSYGNPGVYGAVGGRTGSAPNSNASGQGGSELQGSGGSGSYMGSGYGDTNGNSGYGNAAWRSEQAQASGNYGTPQGNGGQAGYGGGYGGAQSRQAQQQ*