Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005388.01.T01 | ACJ83856.1 | 75.796 | 157 | 25 | 3 | 1 | 157 | 1 | 144 | 2.85E-56 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005388.01.T01 | Q6NPF9 | 80.233 | 86 | 17 | 0 | 72 | 157 | 62 | 147 | 3.13E-49 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005388.01.T01 | B7FGH7 | 75.796 | 157 | 25 | 3 | 1 | 157 | 1 | 144 | 1.36e-56 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0180005388.01 | -0.814682 | 1.360327e-51 | 9.187990e-49 |
| MsG0080048150.01 | MsG0180005388.01 | -0.814639 | 1.390437e-51 | 9.380700e-49 |
| MsG0080049059.01 | MsG0180005388.01 | -0.804930 | 1.705337e-49 | 8.905774e-47 |
| MsG0180000001.01 | MsG0180005388.01 | -0.820014 | 8.576648e-53 | 6.707414e-50 |
| MsG0180000373.01 | MsG0180005388.01 | -0.823577 | 1.285094e-53 | 1.110875e-50 |
| MsG0180001006.01 | MsG0180005388.01 | -0.839800 | 1.275904e-57 | 1.781720e-54 |
| MsG0180001117.01 | MsG0180005388.01 | -0.811308 | 7.470399e-51 | 4.608117e-48 |
| MsG0180001294.01 | MsG0180005388.01 | -0.813085 | 3.059296e-51 | 1.978641e-48 |
| MsG0180003257.01 | MsG0180005388.01 | -0.802578 | 5.248202e-49 | 2.579985e-46 |
| MsG0180003337.01 | MsG0180005388.01 | -0.849047 | 4.155675e-60 | 7.779310e-57 |
| MsG0180003409.01 | MsG0180005388.01 | -0.842009 | 3.359493e-58 | 5.025040e-55 |
| MsG0180003444.01 | MsG0180005388.01 | -0.811725 | 6.064005e-51 | 3.782242e-48 |
| MsG0180003864.01 | MsG0180005388.01 | -0.812002 | 5.277492e-51 | 3.316176e-48 |
| MsG0180004320.01 | MsG0180005388.01 | -0.808466 | 3.055407e-50 | 1.748312e-47 |
| MsG0180004970.01 | MsG0180005388.01 | -0.824383 | 8.315066e-54 | 7.353297e-51 |
| MsG0180005388.01 | MsG0180005389.01 | 0.904675 | 9.573181e-80 | 1.496875e-75 |
| MsG0180005388.01 | MsG0180005614.01 | -0.816424 | 5.569820e-52 | 3.945020e-49 |
| MsG0180005388.01 | MsG0180006023.01 | -0.804884 | 1.743698e-49 | 9.095485e-47 |
| MsG0180005388.01 | MsG0180006226.01 | 0.803842 | 2.873968e-49 | 1.459366e-46 |
| MsG0180005388.01 | MsG0180006235.01 | -0.825796 | 3.856136e-54 | 3.551014e-51 |
| MsG0180005388.01 | MsG0280006420.01 | -0.823268 | 1.517787e-53 | 1.300554e-50 |
| MsG0180005388.01 | MsG0280007071.01 | -0.826725 | 2.316972e-54 | 2.190651e-51 |
| MsG0180005388.01 | MsG0280007089.01 | -0.821968 | 3.044450e-53 | 2.514132e-50 |
| MsG0180005388.01 | MsG0280007196.01 | -0.800042 | 1.734766e-48 | 7.996697e-46 |
| MsG0180005388.01 | MsG0280007321.01 | -0.801052 | 1.079807e-48 | 5.107153e-46 |
| MsG0180005388.01 | MsG0280007609.01 | -0.823058 | 1.699406e-53 | 1.447695e-50 |
| MsG0180005388.01 | MsG0280007790.01 | -0.804693 | 1.910699e-49 | 9.916882e-47 |
| MsG0180005388.01 | MsG0280008280.01 | -0.857563 | 1.498782e-62 | 3.714851e-59 |
| MsG0180005388.01 | MsG0280008284.01 | -0.819679 | 1.023464e-52 | 7.928844e-50 |
| MsG0180005388.01 | MsG0280008885.01 | -0.836415 | 9.482182e-57 | 1.194168e-53 |
| MsG0180005388.01 | MsG0280009234.01 | -0.821806 | 3.318776e-53 | 2.728304e-50 |
| MsG0180005388.01 | MsG0280010002.01 | -0.818787 | 1.633646e-52 | 1.234663e-49 |
| MsG0180005388.01 | MsG0280010173.01 | -0.814380 | 1.586808e-51 | 1.063095e-48 |
| MsG0180005388.01 | MsG0280010389.01 | -0.838166 | 3.379262e-57 | 4.488399e-54 |
| MsG0180005388.01 | MsG0280010554.01 | -0.825653 | 4.167836e-54 | 3.822351e-51 |
| MsG0180005388.01 | MsG0280010633.01 | -0.809157 | 2.173786e-50 | 1.266785e-47 |
| MsG0180005388.01 | MsG0280011282.01 | -0.826871 | 2.138353e-54 | 2.030380e-51 |
| MsG0180005388.01 | MsG0380012124.01 | -0.815633 | 8.364608e-52 | 5.798311e-49 |
| MsG0180005388.01 | MsG0380012146.01 | -0.809778 | 1.599030e-50 | 9.474105e-48 |
| MsG0180005388.01 | MsG0380012471.01 | -0.852789 | 3.665186e-61 | 7.747396e-58 |
| MsG0180005388.01 | MsG0380013834.01 | -0.801798 | 7.596290e-49 | 3.660884e-46 |
| MsG0180005388.01 | MsG0380014259.01 | -0.809984 | 1.443722e-50 | 8.600141e-48 |
| MsG0180005388.01 | MsG0380015713.01 | -0.816906 | 4.342260e-52 | 3.116548e-49 |
| MsG0180005388.01 | MsG0380015731.01 | -0.806535 | 7.848271e-50 | 4.270375e-47 |
| MsG0180005388.01 | MsG0380015793.01 | 0.848535 | 5.760961e-60 | 1.060566e-56 |
| MsG0180005388.01 | MsG0380016553.01 | -0.841495 | 4.591188e-58 | 6.758322e-55 |
| MsG0180005388.01 | MsG0380016765.01 | -0.819813 | 9.536982e-53 | 7.416515e-50 |
| MsG0180005388.01 | MsG0380016971.01 | -0.816041 | 6.783245e-52 | 4.754848e-49 |
| MsG0180005388.01 | MsG0380016994.01 | -0.806457 | 8.150335e-50 | 4.426061e-47 |
| MsG0180005388.01 | MsG0380017049.01 | -0.814105 | 1.824605e-51 | 1.213260e-48 |
| MsG0180005388.01 | MsG0480018462.01 | -0.831636 | 1.492123e-55 | 1.628753e-52 |
| MsG0180005388.01 | MsG0480018641.01 | -0.815881 | 7.364400e-52 | 5.139201e-49 |
| MsG0180005388.01 | MsG0480018919.01 | -0.807653 | 4.550076e-50 | 2.548455e-47 |
| MsG0180005388.01 | MsG0480020065.01 | -0.812375 | 4.376185e-51 | 2.777716e-48 |
| MsG0180005388.01 | MsG0480020090.01 | -0.809463 | 1.868879e-50 | 1.097988e-47 |
| MsG0180005388.01 | MsG0480020263.01 | -0.803247 | 3.819118e-49 | 1.909771e-46 |
| MsG0180005388.01 | MsG0480020495.01 | -0.803206 | 3.893184e-49 | 1.944787e-46 |
| MsG0180005388.01 | MsG0480021464.01 | -0.811336 | 7.367669e-51 | 4.548090e-48 |
| MsG0180005388.01 | MsG0480021772.01 | -0.821684 | 3.543082e-53 | 2.902481e-50 |
| MsG0180005388.01 | MsG0480022167.01 | -0.843510 | 1.340533e-58 | 2.102143e-55 |
| MsG0180005388.01 | MsG0480022325.01 | -0.829278 | 5.629005e-55 | 5.735197e-52 |
| MsG0180005388.01 | MsG0480022481.01 | -0.846326 | 2.330035e-59 | 3.995595e-56 |
| MsG0180005388.01 | MsG0480022971.01 | -0.812024 | 5.221092e-51 | 3.282569e-48 |
| MsG0180005388.01 | MsG0480023596.01 | -0.840248 | 9.747496e-58 | 1.380358e-54 |
| MsG0180005388.01 | MsG0480023707.01 | -0.813151 | 2.959740e-51 | 1.917658e-48 |
| MsG0180005388.01 | MsG0480023832.01 | -0.843842 | 1.092297e-58 | 1.730920e-55 |
| MsG0180005388.01 | MsG0480023873.01 | -0.805027 | 1.627249e-49 | 8.518406e-47 |
| MsG0180005388.01 | MsG0580024035.01 | -0.849848 | 2.485238e-60 | 4.774743e-57 |
| MsG0180005388.01 | MsG0580024478.01 | -0.817075 | 3.979337e-52 | 2.869297e-49 |
| MsG0180005388.01 | MsG0580024489.01 | -0.816315 | 5.891906e-52 | 4.161108e-49 |
| MsG0180005388.01 | MsG0580024618.01 | -0.823645 | 1.239262e-53 | 1.073343e-50 |
| MsG0180005388.01 | MsG0580024758.01 | -0.801981 | 6.966879e-49 | 3.373039e-46 |
| MsG0180005388.01 | MsG0580025766.01 | -0.806042 | 9.967975e-50 | 5.356018e-47 |
| MsG0180005388.01 | MsG0580026157.01 | -0.838107 | 3.499937e-57 | 4.640373e-54 |
| MsG0180005388.01 | MsG0580028060.01 | -0.801816 | 7.533234e-49 | 3.632164e-46 |
| MsG0180005388.01 | MsG0680030436.01 | -0.812778 | 3.572438e-51 | 2.291725e-48 |
| MsG0180005388.01 | MsG0680031549.01 | -0.814448 | 1.532805e-51 | 1.028777e-48 |
| MsG0180005388.01 | MsG0680031651.01 | -0.806176 | 9.341436e-50 | 5.036661e-47 |
| MsG0180005388.01 | MsG0680034392.01 | -0.821748 | 3.423942e-53 | 2.809825e-50 |
| MsG0180005388.01 | MsG0680034598.01 | -0.828674 | 7.885312e-55 | 7.891458e-52 |
| MsG0180005388.01 | MsG0680035346.01 | -0.803833 | 2.886632e-49 | 1.465432e-46 |
| MsG0180005388.01 | MsG0680035777.01 | -0.805156 | 1.529591e-49 | 8.033931e-47 |
| MsG0180005388.01 | MsG0780036133.01 | -0.809599 | 1.747317e-50 | 1.030353e-47 |
| MsG0180005388.01 | MsG0780036663.01 | -0.851691 | 7.523703e-61 | 1.535203e-57 |
| MsG0180005388.01 | MsG0780038652.01 | -0.800535 | 1.377407e-48 | 6.429177e-46 |
| MsG0180005388.01 | MsG0780038837.01 | -0.855727 | 5.195552e-62 | 1.211138e-58 |
| MsG0180005388.01 | MsG0780039137.01 | -0.857469 | 1.598505e-62 | 3.949453e-59 |
| MsG0180005388.01 | MsG0780039462.01 | 0.829694 | 4.460939e-55 | 4.600257e-52 |
| MsG0180005388.01 | MsG0780040160.01 | -0.809469 | 1.863071e-50 | 1.094760e-47 |
| MsG0180005388.01 | MsG0780040482.01 | -0.813943 | 1.981475e-51 | 1.311768e-48 |
| MsG0180005388.01 | MsG0780040483.01 | -0.800716 | 1.264629e-48 | 5.930018e-46 |
| MsG0180005388.01 | MsG0780040688.01 | -0.807836 | 4.161044e-50 | 2.341737e-47 |
| MsG0180005388.01 | MsG0780040723.01 | -0.804111 | 2.527327e-49 | 1.292192e-46 |
| MsG0180005388.01 | MsG0780040841.01 | -0.808245 | 3.404605e-50 | 1.936943e-47 |
| MsG0180005388.01 | MsG0780040861.01 | -0.801675 | 8.052522e-49 | 3.868524e-46 |
| MsG0180005388.01 | MsG0780040896.01 | -0.827014 | 1.976213e-54 | 1.884330e-51 |
| MsG0180005388.01 | MsG0780041535.01 | -0.834813 | 2.411744e-56 | 2.894246e-53 |
| MsG0180005388.01 | MsG0780041559.01 | -0.806685 | 7.296602e-50 | 3.985303e-47 |
| MsG0180005388.01 | MsG0780041667.01 | -0.804133 | 2.500330e-49 | 1.279108e-46 |
| MsG0180005388.01 | MsG0880041860.01 | -0.824167 | 9.346828e-54 | 8.215332e-51 |
| MsG0180005388.01 | MsG0880041883.01 | -0.891813 | 2.819998e-74 | 2.510952e-70 |
| MsG0180005388.01 | MsG0880042046.01 | -0.803532 | 3.332595e-49 | 1.678838e-46 |
| MsG0180005388.01 | MsG0880042552.01 | -0.836073 | 1.158703e-56 | 1.444284e-53 |
| MsG0180005388.01 | MsG0880045118.01 | -0.806433 | 8.246617e-50 | 4.475373e-47 |
| MsG0180005388.01 | MsG0880045653.01 | -0.804695 | 1.909543e-49 | 9.911243e-47 |
| MsG0180005388.01 | MsG0880046165.01 | -0.825814 | 3.816946e-54 | 3.516758e-51 |
| MsG0180005388.01 | MsG0880046669.01 | -0.807430 | 5.073666e-50 | 2.825384e-47 |
| MsG0180005388.01 | MsG0880047012.01 | -0.857121 | 2.025188e-62 | 4.945396e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005388.01.T01 | MTR_1g098660 | 75.796 | 157 | 25 | 3 | 1 | 157 | 1 | 144 | 5.65e-60 | 184 |
| MsG0180005388.01.T01 | MTR_3g089065 | 42.308 | 78 | 45 | 0 | 79 | 156 | 74 | 151 | 5.77e-21 | 84.7 |
| MsG0180005388.01.T01 | MTR_1g114290 | 40.789 | 76 | 45 | 0 | 81 | 156 | 76 | 151 | 3.20e-20 | 82.8 |
| MsG0180005388.01.T01 | MTR_8g059015 | 35.897 | 78 | 50 | 0 | 79 | 156 | 77 | 154 | 4.87e-19 | 79.7 |
| MsG0180005388.01.T01 | MTR_2g079420 | 34.524 | 84 | 55 | 0 | 73 | 156 | 68 | 151 | 1.76e-18 | 78.2 |
| MsG0180005388.01.T01 | MTR_1g023140 | 40.000 | 70 | 41 | 1 | 89 | 158 | 26 | 94 | 3.42e-17 | 73.2 |
| MsG0180005388.01.T01 | MTR_7g009070 | 38.889 | 72 | 43 | 1 | 87 | 158 | 44 | 114 | 6.77e-17 | 72.8 |
| MsG0180005388.01.T01 | MTR_3g112410 | 38.235 | 68 | 41 | 1 | 89 | 156 | 26 | 92 | 2.28e-16 | 71.2 |
| MsG0180005388.01.T01 | MTR_5g037950 | 39.683 | 63 | 37 | 1 | 90 | 152 | 40 | 101 | 6.61e-16 | 70.1 |
| MsG0180005388.01.T01 | MTR_5g021180 | 38.750 | 80 | 45 | 2 | 82 | 158 | 18 | 96 | 2.52e-15 | 68.6 |
| MsG0180005388.01.T01 | MTR_4g085880 | 30.952 | 126 | 77 | 2 | 41 | 156 | 21 | 146 | 8.27e-15 | 68.6 |
| MsG0180005388.01.T01 | MTR_1g087520 | 35.065 | 77 | 48 | 1 | 81 | 155 | 155 | 231 | 2.96e-13 | 66.6 |
| MsG0180005388.01.T01 | MTR_5g037930 | 31.507 | 73 | 49 | 1 | 80 | 152 | 31 | 102 | 7.92e-13 | 62.0 |
| MsG0180005388.01.T01 | MTR_7g112040 | 36.486 | 74 | 45 | 1 | 81 | 152 | 150 | 223 | 1.39e-12 | 64.7 |
| MsG0180005388.01.T01 | MTR_1g096790 | 41.250 | 80 | 43 | 2 | 81 | 157 | 34 | 112 | 2.20e-12 | 63.9 |
| MsG0180005388.01.T01 | MTR_5g084930 | 32.911 | 79 | 53 | 0 | 79 | 157 | 34 | 112 | 8.01e-12 | 62.4 |
| MsG0180005388.01.T01 | MTR_5g037890 | 33.871 | 62 | 40 | 1 | 90 | 151 | 39 | 99 | 1.17e-11 | 58.9 |
| MsG0180005388.01.T01 | MTR_2g010750 | 37.143 | 70 | 43 | 1 | 88 | 157 | 28 | 96 | 3.60e-11 | 57.8 |
| MsG0180005388.01.T01 | MTR_1g037680 | 31.461 | 89 | 59 | 2 | 65 | 152 | 71 | 158 | 3.84e-11 | 58.9 |
| MsG0180005388.01.T01 | MTR_2g021750 | 31.579 | 76 | 52 | 0 | 82 | 157 | 37 | 112 | 6.25e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005388.01.T01 | AT1G76760 | 80.233 | 86 | 17 | 0 | 72 | 157 | 62 | 147 | 3.19e-50 | 159 |
| MsG0180005388.01.T01 | AT1G43560 | 82.927 | 82 | 14 | 0 | 75 | 156 | 60 | 141 | 6.83e-47 | 150 |
| MsG0180005388.01.T01 | AT1G50320 | 43.590 | 78 | 44 | 0 | 81 | 158 | 77 | 154 | 1.31e-19 | 81.3 |
| MsG0180005388.01.T01 | AT1G03680 | 35.526 | 76 | 49 | 0 | 81 | 156 | 82 | 157 | 2.62e-18 | 77.8 |
| MsG0180005388.01.T01 | AT3G15360 | 36.842 | 76 | 48 | 0 | 81 | 156 | 94 | 169 | 1.65e-16 | 73.6 |
| MsG0180005388.01.T01 | AT5G39950 | 37.500 | 72 | 44 | 1 | 87 | 158 | 43 | 113 | 4.94e-16 | 70.9 |
| MsG0180005388.01.T01 | AT3G51030 | 41.667 | 72 | 40 | 2 | 88 | 158 | 24 | 94 | 8.65e-15 | 67.0 |
| MsG0180005388.01.T01 | AT4G03520 | 31.579 | 76 | 52 | 0 | 81 | 156 | 88 | 163 | 1.58e-14 | 68.2 |
| MsG0180005388.01.T01 | AT2G15570 | 29.545 | 88 | 62 | 0 | 69 | 156 | 62 | 149 | 2.06e-14 | 67.4 |
| MsG0180005388.01.T01 | AT2G15570 | 30.488 | 82 | 57 | 0 | 75 | 156 | 69 | 150 | 1.86e-13 | 65.1 |
| MsG0180005388.01.T01 | AT1G59730 | 28.409 | 88 | 61 | 2 | 71 | 158 | 24 | 109 | 5.21e-13 | 62.8 |
| MsG0180005388.01.T01 | AT1G45145 | 35.821 | 67 | 42 | 1 | 89 | 155 | 25 | 90 | 7.93e-13 | 62.0 |
| MsG0180005388.01.T01 | AT1G69880 | 31.111 | 90 | 60 | 2 | 69 | 158 | 38 | 125 | 1.36e-12 | 62.0 |
| MsG0180005388.01.T01 | AT5G42980 | 35.294 | 68 | 43 | 1 | 89 | 156 | 25 | 91 | 1.77e-12 | 61.2 |
| MsG0180005388.01.T01 | AT1G35620 | 39.759 | 83 | 46 | 2 | 79 | 158 | 38 | 119 | 2.68e-12 | 63.9 |
| MsG0180005388.01.T01 | AT1G19730 | 30.556 | 72 | 50 | 0 | 85 | 156 | 22 | 93 | 4.51e-12 | 60.1 |
| MsG0180005388.01.T01 | AT1G04980 | 35.802 | 81 | 52 | 0 | 79 | 159 | 38 | 118 | 6.41e-12 | 62.8 |
| MsG0180005388.01.T01 | AT3G06730 | 36.842 | 76 | 47 | 1 | 75 | 149 | 77 | 152 | 4.54e-11 | 58.9 |
| MsG0180005388.01.T01 | AT2G47470 | 32.051 | 78 | 50 | 2 | 82 | 156 | 150 | 227 | 6.64e-11 | 59.7 |
| MsG0180005388.01.T01 | AT2G47470 | 32.051 | 78 | 50 | 2 | 82 | 156 | 150 | 227 | 7.69e-11 | 59.7 |
| MsG0180005388.01.T01 | AT2G47470 | 31.646 | 79 | 51 | 2 | 81 | 156 | 149 | 227 | 7.73e-11 | 59.3 |
| MsG0180005388.01.T01 | AT2G47470 | 31.646 | 79 | 51 | 2 | 81 | 156 | 149 | 227 | 8.08e-11 | 58.9 |
| MsG0180005388.01.T01 | AT3G08710 | 33.721 | 86 | 53 | 2 | 79 | 161 | 30 | 114 | 9.88e-11 | 57.0 |
| MsG0180005388.01.T01 | AT3G08710 | 33.721 | 86 | 53 | 2 | 79 | 161 | 30 | 114 | 9.88e-11 | 57.0 |
| MsG0180005388.01.T01 | AT3G08710 | 33.721 | 86 | 53 | 2 | 79 | 161 | 30 | 114 | 9.88e-11 | 57.0 |
Find 47 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAACTTTCATCCTCTTTA+AGG | 0.050868 | 1:+91169991 | MsG0180005388.01.T01:CDS |
| TATCTACTTATTTATTTCTT+TGG | 0.166097 | 1:-91168098 | None:intergenic |
| TTGAGAACTGACCAGCATTT+TGG | 0.203353 | 1:+91169568 | MsG0180005388.01.T01:intron |
| ATCTACTTATTTATTTCTTT+GGG | 0.274403 | 1:-91168097 | None:intergenic |
| GTGTGGTCCTTGTCAGTTCA+TGG | 0.318473 | 1:+91169859 | MsG0180005388.01.T01:CDS |
| TGCCTCAATGTTGTATTTGT+TGG | 0.387952 | 1:-91169966 | None:intergenic |
| GAAACGAGGGCGGGAGGAAG+AGG | 0.425682 | 1:-91168329 | None:intergenic |
| CTCTTCTTCGTCCACACGTC+TGG | 0.425949 | 1:+91168224 | MsG0180005388.01.T01:CDS |
| TTTATTTCTTTGGGAATTGA+CGG | 0.439793 | 1:-91168088 | None:intergenic |
| CAAATCATCAAAAGAGGAAA+AGG | 0.443022 | 1:-91169626 | None:intergenic |
| ACTCCTCGCCTTCTTCCAAT+TGG | 0.450067 | 1:+91168292 | MsG0180005388.01.T01:CDS |
| TGCTGAGATGGAAGCGGCCA+TGG | 0.463484 | 1:-91168169 | None:intergenic |
| GGAAAACCAACTGCTCTGTA+TGG | 0.465206 | 1:-91168041 | None:intergenic |
| GCATAGAAGTCAACAAATAC+AGG | 0.470351 | 1:-91169667 | None:intergenic |
| CAAAATGAGAACGAACAGAT+TGG | 0.476905 | 1:-91168142 | None:intergenic |
| GAAAGACGGCGAGTACCAAT+TGG | 0.490211 | 1:-91168307 | None:intergenic |
| GTCAACAAATACAGGCTTGT+CGG | 0.497227 | 1:-91169659 | None:intergenic |
| AGAGGAAGACGCTGCTGAGA+TGG | 0.502504 | 1:-91168181 | None:intergenic |
| TGCAAGCAAATCATCAAAAG+AGG | 0.504002 | 1:-91169632 | None:intergenic |
| ACTTTCATCCTCTTTAAGGA+TGG | 0.506349 | 1:+91169995 | MsG0180005388.01.T01:CDS |
| GGCGAGGAGTTCGAAATTGA+AGG | 0.521846 | 1:-91168279 | None:intergenic |
| TCCTTAAAGAGGATGAAAGT+TGG | 0.524641 | 1:-91169992 | None:intergenic |
| GGCGGGAGGAAGAGGAAAGA+CGG | 0.525873 | 1:-91168321 | None:intergenic |
| CCAACTTACAAAGCGATCAA+AGG | 0.537748 | 1:-91170022 | None:intergenic |
| GAAGTAGAAACGAGGGCGGG+AGG | 0.542165 | 1:-91168335 | None:intergenic |
| AAAAGTCCATACAGAGCAGT+TGG | 0.544102 | 1:+91168035 | MsG0180005388.01.T01:five_prime_UTR |
| GTTCATGGTTCCTGTACTTG+AGG | 0.555079 | 1:+91169874 | MsG0180005388.01.T01:CDS |
| GCGCTCACTTCCTCAAGTAC+AGG | 0.556326 | 1:-91169884 | None:intergenic |
| AGACGCTGCTGAGATGGAAG+CGG | 0.566090 | 1:-91168175 | None:intergenic |
| ACGAAGAAGAGTTCAAAGAA+TGG | 0.574201 | 1:-91168212 | None:intergenic |
| GAGGAAGTAGAAACGAGGGC+GGG | 0.583505 | 1:-91168338 | None:intergenic |
| GGCGAGTACCAATTGGAAGA+AGG | 0.589024 | 1:-91168300 | None:intergenic |
| TTGTATTTGTTGGCAATGCT+AGG | 0.592667 | 1:-91169956 | None:intergenic |
| TTGTTGACTTCTATGCAACC+TGG | 0.598842 | 1:+91169674 | MsG0180005388.01.T01:CDS |
| AATTAATATTTAATCCCAAG+AGG | 0.613147 | 1:-91168062 | None:intergenic |
| TACTTGAGGAAGTGAGCGCT+CGG | 0.618555 | 1:+91169888 | MsG0180005388.01.T01:CDS |
| AAGAAGAGTTCAAAGAATGG+AGG | 0.632769 | 1:-91168209 | None:intergenic |
| TGATGATGAGATGATGATGA+AGG | 0.635435 | 1:-91168249 | None:intergenic |
| GTACCAATTGGAAGAAGGCG+AGG | 0.648368 | 1:-91168295 | None:intergenic |
| AGAGGAAGTAGAAACGAGGG+CGG | 0.649804 | 1:-91168339 | None:intergenic |
| TGCCAACAAATACAACATTG+AGG | 0.660640 | 1:+91169964 | MsG0180005388.01.T01:CDS |
| ATTGGATAATCAGAAAACAA+TGG | 0.661635 | 1:-91168124 | None:intergenic |
| CAAAGAATGGAGGATTACAG+AGG | 0.663758 | 1:-91168199 | None:intergenic |
| ACAGGAACCATGAACTGACA+AGG | 0.685218 | 1:-91169866 | None:intergenic |
| ACGAGAGGAAGTAGAAACGA+GGG | 0.706230 | 1:-91168342 | None:intergenic |
| TGATGAAGGTACCAGACGTG+TGG | 0.715833 | 1:-91168235 | None:intergenic |
| TACGAGAGGAAGTAGAAACG+AGG | 0.722646 | 1:-91168343 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATGGTTATTATAAAA+CGG | - | Chr1:91168409-91168428 | None:intergenic | 10.0% |
| !!! | AAATTCAAAAAGTATATATA+TGG | - | Chr1:91168895-91168914 | None:intergenic | 10.0% |
| !!! | AATTCAAAAAGTATATATAT+GGG | - | Chr1:91168894-91168913 | None:intergenic | 10.0% |
| !! | GAAGAAAGAATATATAATAA+TGG | - | Chr1:91168423-91168442 | None:intergenic | 15.0% |
| !! | TAATAAATTAGTGAATAACT+TGG | - | Chr1:91168476-91168495 | None:intergenic | 15.0% |
| !!! | ATCTACTTATTTATTTCTTT+GGG | - | Chr1:91168100-91168119 | None:intergenic | 15.0% |
| !!! | TATCTACTTATTTATTTCTT+TGG | - | Chr1:91168101-91168120 | None:intergenic | 15.0% |
| !!! | TATTTTATTATACTTGTTGT+TGG | + | Chr1:91168445-91168464 | MsG0180005388.01.T01:intron | 15.0% |
| !! | AAGGAGAAAAATAAAATAGT+TGG | - | Chr1:91168380-91168399 | None:intergenic | 20.0% |
| !! | AATTAATATTTAATCCCAAG+AGG | - | Chr1:91168065-91168084 | None:intergenic | 20.0% |
| !!! | AAAAAGTATATATATGGGTT+TGG | - | Chr1:91168889-91168908 | None:intergenic | 20.0% |
| !!! | CTAATTTTTTGGAATACAAA+AGG | + | Chr1:91169180-91169199 | MsG0180005388.01.T01:intron | 20.0% |
| !!! | TTATCCAATTTTTTCCATAT+TGG | + | Chr1:91169126-91169145 | MsG0180005388.01.T01:intron | 20.0% |
| ! | AACTACAAATTTACTAAACG+CGG | + | Chr1:91169206-91169225 | MsG0180005388.01.T01:intron | 25.0% |
| ! | AATCAAAAGGACTAAGTTTA+GGG | - | Chr1:91168733-91168752 | None:intergenic | 25.0% |
| ! | AATTTAAGCACTTATAAGCA+GGG | + | Chr1:91168910-91168929 | MsG0180005388.01.T01:intron | 25.0% |
| ! | ACTGTTAAACTGTTAAACTA+TGG | + | Chr1:91169464-91169483 | MsG0180005388.01.T01:intron | 25.0% |
| ! | ATGGTTATTATAAAACGGAA+AGG | - | Chr1:91168404-91168423 | None:intergenic | 25.0% |
| ! | ATTGGATAATCAGAAAACAA+TGG | - | Chr1:91168127-91168146 | None:intergenic | 25.0% |
| ! | CAAAAAATTAGCGTAAATTC+TGG | - | Chr1:91169171-91169190 | None:intergenic | 25.0% |
| ! | CAATCCAATATGGAAAAAAT+TGG | - | Chr1:91169133-91169152 | None:intergenic | 25.0% |
| ! | TATTATAAAACGGAAAGGAA+AGG | - | Chr1:91168399-91168418 | None:intergenic | 25.0% |
| ! | TTCCAACACTATATATTTCA+CGG | + | Chr1:91168655-91168674 | MsG0180005388.01.T01:intron | 25.0% |
| !! | TGAAATATATAGTGTTGGAA+GGG | - | Chr1:91168655-91168674 | None:intergenic | 25.0% |
| !! | TTTATTTCTTTGGGAATTGA+CGG | - | Chr1:91168091-91168110 | None:intergenic | 25.0% |
| !!! | CAGAATTTACGCTAATTTTT+TGG | + | Chr1:91169169-91169188 | MsG0180005388.01.T01:intron | 25.0% |
| ATTATGTCGTGTCAAAATTG+CGG | + | Chr1:91169029-91169048 | MsG0180005388.01.T01:intron | 30.0% | |
| CAAATCATCAAAAGAGGAAA+AGG | - | Chr1:91169629-91169648 | None:intergenic | 30.0% | |
| CAATCAAAAGGACTAAGTTT+AGG | - | Chr1:91168734-91168753 | None:intergenic | 30.0% | |
| CATGAAATATAACCAGCTAA+AGG | - | Chr1:91169766-91169785 | None:intergenic | 30.0% | |
| GAAAACAATATCCAAAATGC+TGG | - | Chr1:91169582-91169601 | None:intergenic | 30.0% | |
| GAATTTAAGCACTTATAAGC+AGG | + | Chr1:91168909-91168928 | MsG0180005388.01.T01:intron | 30.0% | |
| GGTAATATGATTCAGAAATG+AGG | - | Chr1:91168634-91168653 | None:intergenic | 30.0% | |
| ! | ACTGTTAAACTATGGCTTTA+AGG | + | Chr1:91169472-91169491 | MsG0180005388.01.T01:intron | 30.0% |
| ! | GAAAAACCATTTTCCTTTCA+CGG | - | Chr1:91168855-91168874 | None:intergenic | 30.0% |
| ! | GTGAAATATATAGTGTTGGA+AGG | - | Chr1:91168656-91168675 | None:intergenic | 30.0% |
| ! | TTTTGGATATTGTTTTCTGC+AGG | + | Chr1:91169585-91169604 | MsG0180005388.01.T01:CDS | 30.0% |
| !! | GTGTAAGCAGGTTTTAATAA+AGG | - | Chr1:91169062-91169081 | None:intergenic | 30.0% |
| AAGAAGAGTTCAAAGAATGG+AGG | - | Chr1:91168212-91168231 | None:intergenic | 35.0% | |
| ACGAAGAAGAGTTCAAAGAA+TGG | - | Chr1:91168215-91168234 | None:intergenic | 35.0% | |
| AGAAGAAAATGGAAAACGCA+CGG | - | Chr1:91169711-91169730 | None:intergenic | 35.0% | |
| AGAATTTATGACGTGTAAGC+AGG | - | Chr1:91169074-91169093 | None:intergenic | 35.0% | |
| AGTGCACTTTCTAGATGTTT+GGG | + | Chr1:91168540-91168559 | MsG0180005388.01.T01:intron | 35.0% | |
| ATCAGGGCAATCATCATAAA+TGG | + | Chr1:91169274-91169293 | MsG0180005388.01.T01:intron | 35.0% | |
| ATGAAGAGAGGAGAAGAAAA+TGG | - | Chr1:91169722-91169741 | None:intergenic | 35.0% | |
| ATTGCAAGCATGAATGAACA+TGG | - | Chr1:91169506-91169525 | None:intergenic | 35.0% | |
| CAAAATGAGAACGAACAGAT+TGG | - | Chr1:91168145-91168164 | None:intergenic | 35.0% | |
| CACTATATATTTCACGGACT+AGG | + | Chr1:91168661-91168680 | MsG0180005388.01.T01:intron | 35.0% | |
| CCATCCACCAAAAATCTTTA+GGG | + | Chr1:91168754-91168773 | MsG0180005388.01.T01:intron | 35.0% | |
| CTGCAATTGCAATCATGTTA+TGG | + | Chr1:91168987-91169006 | MsG0180005388.01.T01:intron | 35.0% | |
| GCATAGAAGTCAACAAATAC+AGG | - | Chr1:91169670-91169689 | None:intergenic | 35.0% | |
| GTCCGTGAAATATATAGTGT+TGG | - | Chr1:91168660-91168679 | None:intergenic | 35.0% | |
| TAGTGCACTTTCTAGATGTT+TGG | + | Chr1:91168539-91168558 | MsG0180005388.01.T01:intron | 35.0% | |
| TCCTTAAAGAGGATGAAAGT+TGG | - | Chr1:91169995-91170014 | None:intergenic | 35.0% | |
| TGCAAGCAAATCATCAAAAG+AGG | - | Chr1:91169635-91169654 | None:intergenic | 35.0% | |
| TGCCAACAAATACAACATTG+AGG | + | Chr1:91169964-91169983 | MsG0180005388.01.T01:CDS | 35.0% | |
| TGCCTCAATGTTGTATTTGT+TGG | - | Chr1:91169969-91169988 | None:intergenic | 35.0% | |
| TTGCAAGCATGAATGAACAT+GGG | - | Chr1:91169505-91169524 | None:intergenic | 35.0% | |
| TTGTGAGCATGTATGTAATC+AGG | - | Chr1:91168706-91168725 | None:intergenic | 35.0% | |
| ! | AACCAGACCCTAAAGATTTT+TGG | - | Chr1:91168764-91168783 | None:intergenic | 35.0% |
| ! | AAGGTTTTCCATCCTTAAAG+AGG | - | Chr1:91170006-91170025 | None:intergenic | 35.0% |
| ! | AATTATCGCCTGATTTGATC+AGG | + | Chr1:91169257-91169276 | MsG0180005388.01.T01:intron | 35.0% |
| ! | ACTTTCATCCTCTTTAAGGA+TGG | + | Chr1:91169995-91170014 | MsG0180005388.01.T01:CDS | 35.0% |
| ! | ATTATCGCCTGATTTGATCA+GGG | + | Chr1:91169258-91169277 | MsG0180005388.01.T01:intron | 35.0% |
| ! | TGATGATGAGATGATGATGA+AGG | - | Chr1:91168252-91168271 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGGCAATGCT+AGG | - | Chr1:91169959-91169978 | None:intergenic | 35.0% |
| !! | AAAAATCTTTAGGGTCTGGT+TGG | + | Chr1:91168763-91168782 | MsG0180005388.01.T01:intron | 35.0% |
| !!! | GAAGCATTTTTTCCTTTAGC+TGG | + | Chr1:91169751-91169770 | MsG0180005388.01.T01:intron | 35.0% |
| AAAAGTCCATACAGAGCAGT+TGG | + | Chr1:91168035-91168054 | MsG0180005388.01.T01:five_prime_UTR | 40.0% | |
| AAACGATTTAGCAGCTAGAC+TGG | - | Chr1:91169388-91169407 | None:intergenic | 40.0% | |
| AACATCCCATAACAGTACCT+CGG | + | Chr1:91169417-91169436 | MsG0180005388.01.T01:intron | 40.0% | |
| AACGATTTAGCAGCTAGACT+GGG | - | Chr1:91169387-91169406 | None:intergenic | 40.0% | |
| AAGAAAATGGAAAACGCACG+GGG | - | Chr1:91169709-91169728 | None:intergenic | 40.0% | |
| AATGGGGCAACAATCCAATA+TGG | - | Chr1:91169143-91169162 | None:intergenic | 40.0% | |
| ATCTCGAGTATCAGAAGTAG+AGG | - | Chr1:91169443-91169462 | None:intergenic | 40.0% | |
| ATGATTGCCCTGATCAAATC+AGG | - | Chr1:91169268-91169287 | None:intergenic | 40.0% | |
| CAAAGAATGGAGGATTACAG+AGG | - | Chr1:91168202-91168221 | None:intergenic | 40.0% | |
| CACACCTATAAACCAGCATT+GGG | - | Chr1:91169844-91169863 | None:intergenic | 40.0% | |
| CGTAAATTCTGGCGATCAAT+GGG | - | Chr1:91169160-91169179 | None:intergenic | 40.0% | |
| GAAGAAAATGGAAAACGCAC+GGG | - | Chr1:91169710-91169729 | None:intergenic | 40.0% | |
| GAGTCATGTTTATCGTGAAG+CGG | - | Chr1:91169354-91169373 | None:intergenic | 40.0% | |
| GCCAACTTTCATCCTCTTTA+AGG | + | Chr1:91169991-91170010 | MsG0180005388.01.T01:CDS | 40.0% | |
| GCCATCCACCAAAAATCTTT+AGG | + | Chr1:91168753-91168772 | MsG0180005388.01.T01:intron | 40.0% | |
| GTAAATTCTGGCGATCAATG+GGG | - | Chr1:91169159-91169178 | None:intergenic | 40.0% | |
| GTCAACAAATACAGGCTTGT+CGG | - | Chr1:91169662-91169681 | None:intergenic | 40.0% | |
| GTGCACTTTCTAGATGTTTG+GGG | + | Chr1:91168541-91168560 | MsG0180005388.01.T01:intron | 40.0% | |
| TCTAATCAGTAACCCAATGC+TGG | + | Chr1:91169829-91169848 | MsG0180005388.01.T01:intron | 40.0% | |
| TCTTCTCCTCTCTTCATGTT+GGG | + | Chr1:91169725-91169744 | MsG0180005388.01.T01:intron | 40.0% | |
| TTCAAACCCAACATGAAGAG+AGG | - | Chr1:91169734-91169753 | None:intergenic | 40.0% | |
| TTCTTCTCCTCTCTTCATGT+TGG | + | Chr1:91169724-91169743 | MsG0180005388.01.T01:intron | 40.0% | |
| ! | ACCATTTTCCTTTCACGGTT+TGG | - | Chr1:91168850-91168869 | None:intergenic | 40.0% |
| ! | CCATTTTCCTTTCACGGTTT+GGG | - | Chr1:91168849-91168868 | None:intergenic | 40.0% |
| ! | GTTGGTTCAAGTTCAACAGA+GGG | + | Chr1:91168785-91168804 | MsG0180005388.01.T01:intron | 40.0% |
| ! | TTGAGAACTGACCAGCATTT+TGG | + | Chr1:91169568-91169587 | MsG0180005388.01.T01:intron | 40.0% |
| ! | TTGGTTCAAGTTCAACAGAG+GGG | + | Chr1:91168786-91168805 | MsG0180005388.01.T01:intron | 40.0% |
| ! | TTTGGTGGATGGCAATCAAA+AGG | - | Chr1:91168746-91168765 | None:intergenic | 40.0% |
| !! | ACTAGGCTTTGTTTGGTGTT+TGG | + | Chr1:91168678-91168697 | MsG0180005388.01.T01:intron | 40.0% |
| !! | CACCAAAAATCTTTAGGGTC+TGG | + | Chr1:91168759-91168778 | MsG0180005388.01.T01:intron | 40.0% |
| !! | CAGACCCTAAAGATTTTTGG+TGG | - | Chr1:91168761-91168780 | None:intergenic | 40.0% |
| !! | GTAACCCAATGCTGGTTTAT+AGG | + | Chr1:91169837-91169856 | MsG0180005388.01.T01:intron | 40.0% |
| !! | TGGTTAGTGTTACTTACGAG+AGG | - | Chr1:91168360-91168379 | None:intergenic | 40.0% |
| !! | TTGTTGACTTCTATGCAACC+TGG | + | Chr1:91169674-91169693 | MsG0180005388.01.T01:CDS | 40.0% |
| !!! | CCCTAAAGATTTTTGGTGGA+TGG | - | Chr1:91168757-91168776 | None:intergenic | 40.0% |
| !!! | CGTTCTCATTTTGACTACCA+TGG | + | Chr1:91168152-91168171 | MsG0180005388.01.T01:exon | 40.0% |
| AATCACGATCCTTGATGCTG+TGG | + | Chr1:91168944-91168963 | MsG0180005388.01.T01:intron | 45.0% | |
| ACAGGAACCATGAACTGACA+AGG | - | Chr1:91169869-91169888 | None:intergenic | 45.0% | |
| ACGAGAGGAAGTAGAAACGA+GGG | - | Chr1:91168345-91168364 | None:intergenic | 45.0% | |
| CATGATTCTCCACAGCATCA+AGG | - | Chr1:91168956-91168975 | None:intergenic | 45.0% | |
| CCACACCTATAAACCAGCAT+TGG | - | Chr1:91169845-91169864 | None:intergenic | 45.0% | |
| CCCAAACCGTGAAAGGAAAA+TGG | + | Chr1:91168846-91168865 | MsG0180005388.01.T01:intron | 45.0% | |
| CTTGATGCTGTGGAGAATCA+TGG | + | Chr1:91168954-91168973 | MsG0180005388.01.T01:intron | 45.0% | |
| GCGTAAATTCTGGCGATCAA+TGG | - | Chr1:91169161-91169180 | None:intergenic | 45.0% | |
| GGAAAACCAACTGCTCTGTA+TGG | - | Chr1:91168044-91168063 | None:intergenic | 45.0% | |
| GTTCATGGTTCCTGTACTTG+AGG | + | Chr1:91169874-91169893 | MsG0180005388.01.T01:CDS | 45.0% | |
| TAATTCGATGTTGACGCTGC+TGG | - | Chr1:91169242-91169261 | None:intergenic | 45.0% | |
| TACGAGAGGAAGTAGAAACG+AGG | - | Chr1:91168346-91168365 | None:intergenic | 45.0% | |
| TGGAGAATCATGGTCAAACG+CGG | + | Chr1:91168964-91168983 | MsG0180005388.01.T01:intron | 45.0% | |
| ! | GGTTGGTTCAAGTTCAACAG+AGG | + | Chr1:91168784-91168803 | MsG0180005388.01.T01:intron | 45.0% |
| !! | ATCGTGAAGCGGATTTTGTG+CGG | - | Chr1:91169343-91169362 | None:intergenic | 45.0% |
| !! | ATCTTTAGGGTCTGGTTGGT+TGG | + | Chr1:91168767-91168786 | MsG0180005388.01.T01:intron | 45.0% |
| !! | CCAATGCTGGTTTATAGGTG+TGG | + | Chr1:91169842-91169861 | MsG0180005388.01.T01:intron | 45.0% |
| !! | GAGGTACTGTTATGGGATGT+TGG | - | Chr1:91169418-91169437 | None:intergenic | 45.0% |
| !! | TTCACGGACTAGGCTTTGTT+TGG | + | Chr1:91168671-91168690 | MsG0180005388.01.T01:intron | 45.0% |
| !!! | AGAGCAGTTGGTTTTCCTCT+TGG | + | Chr1:91168047-91168066 | MsG0180005388.01.T01:five_prime_UTR | 45.0% |
| !!! | GAGCAGTTGGTTTTCCTCTT+GGG | + | Chr1:91168048-91168067 | MsG0180005388.01.T01:five_prime_UTR | 45.0% |
| ACTCCTCGCCTTCTTCCAAT+TGG | + | Chr1:91168292-91168311 | MsG0180005388.01.T01:CDS | 50.0% | |
| AGAGGAAGTAGAAACGAGGG+CGG | - | Chr1:91168342-91168361 | None:intergenic | 50.0% | |
| AGTATCAGAAGTAGAGGCCG+AGG | - | Chr1:91169437-91169456 | None:intergenic | 50.0% | |
| CAACAGAGGGGAGCGAAAAT+GGG | + | Chr1:91168798-91168817 | MsG0180005388.01.T01:intron | 50.0% | |
| CGGATGGTCTTTGCCATGAT+GGG | - | Chr1:91169323-91169342 | None:intergenic | 50.0% | |
| GAAAGACGGCGAGTACCAAT+TGG | - | Chr1:91168310-91168329 | None:intergenic | 50.0% | |
| GGATGGTCTTTGCCATGATG+GGG | - | Chr1:91169322-91169341 | None:intergenic | 50.0% | |
| GGCGAGGAGTTCGAAATTGA+AGG | - | Chr1:91168282-91168301 | None:intergenic | 50.0% | |
| GGCGAGTACCAATTGGAAGA+AGG | - | Chr1:91168303-91168322 | None:intergenic | 50.0% | |
| GTACCAATTGGAAGAAGGCG+AGG | - | Chr1:91168298-91168317 | None:intergenic | 50.0% | |
| GTGTGGTCCTTGTCAGTTCA+TGG | + | Chr1:91169859-91169878 | MsG0180005388.01.T01:CDS | 50.0% | |
| TACTTGAGGAAGTGAGCGCT+CGG | + | Chr1:91169888-91169907 | MsG0180005388.01.T01:CDS | 50.0% | |
| TCAACAGAGGGGAGCGAAAA+TGG | + | Chr1:91168797-91168816 | MsG0180005388.01.T01:intron | 50.0% | |
| TTCTGCACCAATCCCCATCA+TGG | + | Chr1:91169307-91169326 | MsG0180005388.01.T01:intron | 50.0% | |
| ! | AGGGGAGCGAAAATGGGTTT+AGG | + | Chr1:91168804-91168823 | MsG0180005388.01.T01:intron | 50.0% |
| ! | CCTTTCACGGTTTGGGTAGA+GGG | - | Chr1:91168842-91168861 | None:intergenic | 50.0% |
| ! | CTTTCACGGTTTGGGTAGAG+GGG | - | Chr1:91168841-91168860 | None:intergenic | 50.0% |
| ! | GGAGCGAAAATGGGTTTAGG+GGG | + | Chr1:91168807-91168826 | MsG0180005388.01.T01:intron | 50.0% |
| ! | GGGAGCGAAAATGGGTTTAG+GGG | + | Chr1:91168806-91168825 | MsG0180005388.01.T01:intron | 50.0% |
| ! | GGGGAGCGAAAATGGGTTTA+GGG | + | Chr1:91168805-91168824 | MsG0180005388.01.T01:intron | 50.0% |
| ! | GTCTTTGCCATGATGGGGAT+TGG | - | Chr1:91169317-91169336 | None:intergenic | 50.0% |
| ! | TCCTTTCACGGTTTGGGTAG+AGG | - | Chr1:91168843-91168862 | None:intergenic | 50.0% |
| ! | TTTCACGGTTTGGGTAGAGG+GGG | - | Chr1:91168840-91168859 | None:intergenic | 50.0% |
| !! | AGAGGCCGAGGTACTGTTAT+GGG | - | Chr1:91169425-91169444 | None:intergenic | 50.0% |
| !! | TAGAGGCCGAGGTACTGTTA+TGG | - | Chr1:91169426-91169445 | None:intergenic | 50.0% |
| !! | TGAAGCGGATTTTGTGCGGA+TGG | - | Chr1:91169339-91169358 | None:intergenic | 50.0% |
| !! | TGATGAAGGTACCAGACGTG+TGG | - | Chr1:91168238-91168257 | None:intergenic | 50.0% |
| AGACGCTGCTGAGATGGAAG+CGG | - | Chr1:91168178-91168197 | None:intergenic | 55.0% | |
| AGAGGAAGACGCTGCTGAGA+TGG | - | Chr1:91168184-91168203 | None:intergenic | 55.0% | |
| CCCTCTACCCAAACCGTGAA+AGG | + | Chr1:91168839-91168858 | MsG0180005388.01.T01:intron | 55.0% | |
| CTCTTCTTCGTCCACACGTC+TGG | + | Chr1:91168224-91168243 | MsG0180005388.01.T01:CDS | 55.0% | |
| GAGGAAGTAGAAACGAGGGC+GGG | - | Chr1:91168341-91168360 | None:intergenic | 55.0% | |
| GCGCTCACTTCCTCAAGTAC+AGG | - | Chr1:91169887-91169906 | None:intergenic | 55.0% | |
| GCGGATGGTCTTTGCCATGA+TGG | - | Chr1:91169324-91169343 | None:intergenic | 55.0% | |
| CGCACGGGGAGAAAGTTACC+AGG | - | Chr1:91169695-91169714 | None:intergenic | 60.0% | |
| GAAGTAGAAACGAGGGCGGG+AGG | - | Chr1:91168338-91168357 | None:intergenic | 60.0% | |
| GGCGGGAGGAAGAGGAAAGA+CGG | - | Chr1:91168324-91168343 | None:intergenic | 60.0% | |
| TGCTGAGATGGAAGCGGCCA+TGG | - | Chr1:91168172-91168191 | None:intergenic | 60.0% | |
| GAAACGAGGGCGGGAGGAAG+AGG | - | Chr1:91168332-91168351 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 91168035 | 91170039 | 91168035 | ID=MsG0180005388.01;Name=MsG0180005388.01 |
| Chr1 | mRNA | 91168035 | 91170039 | 91168035 | ID=MsG0180005388.01.T01;Parent=MsG0180005388.01;Name=MsG0180005388.01.T01;_AED=0.49;_eAED=0.51;_QI=136|0.5|0.33|1|0.5|0.33|3|0|161 |
| Chr1 | exon | 91168035 | 91168362 | 91168035 | ID=MsG0180005388.01.T01:exon:17583;Parent=MsG0180005388.01.T01 |
| Chr1 | exon | 91169583 | 91169695 | 91169583 | ID=MsG0180005388.01.T01:exon:17584;Parent=MsG0180005388.01.T01 |
| Chr1 | exon | 91169859 | 91170039 | 91169859 | ID=MsG0180005388.01.T01:exon:17585;Parent=MsG0180005388.01.T01 |
| Chr1 | five_prime_UTR | 91168035 | 91168170 | 91168035 | ID=MsG0180005388.01.T01:five_prime_utr;Parent=MsG0180005388.01.T01 |
| Chr1 | CDS | 91168171 | 91168362 | 91168171 | ID=MsG0180005388.01.T01:cds;Parent=MsG0180005388.01.T01 |
| Chr1 | CDS | 91169583 | 91169695 | 91169583 | ID=MsG0180005388.01.T01:cds;Parent=MsG0180005388.01.T01 |
| Chr1 | CDS | 91169859 | 91170039 | 91169859 | ID=MsG0180005388.01.T01:cds;Parent=MsG0180005388.01.T01 |
| Gene Sequence |
| Protein sequence |
