AlfalfaGEDB | MsG0280009234.01

M. sativa cultivar ZhongmuNo.1 / MsG0280009234.01

KEGG: -
GO: -
PFAM: PF04759

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009234.01.T01	KEH38015.1	95.785	261	8	2	1	260	1	259	0	516

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009234.01.T01	O22227	53.409	176	71	4	93	260	125	297	3.81E-58	190

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009234.01.T01	A0A396JD09	95.785	261	8	2	1	260	5	263	0.0	516

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048855.01	MsG0280009234.01	0.836775	7.681260e-57	9.778917e-54
MsG0180000353.01	MsG0280009234.01	0.831935	1.258982e-55	1.386628e-52
MsG0180001911.01	MsG0280009234.01	0.805685	1.184588e-49	6.307371e-47
MsG0180001930.01	MsG0280009234.01	0.803537	3.324755e-49	1.675098e-46
MsG0180003337.01	MsG0280009234.01	0.804044	2.609770e-49	1.332057e-46
MsG0180003864.01	MsG0280009234.01	0.809273	2.052926e-50	1.200057e-47
MsG0180004099.01	MsG0280009234.01	0.843644	1.234054e-58	1.943571e-55
MsG0180004320.01	MsG0280009234.01	0.829707	4.429000e-55	4.569067e-52
MsG0180004806.01	MsG0280009234.01	0.805829	1.105249e-49	5.906422e-47
MsG0180004970.01	MsG0280009234.01	0.831912	1.275262e-55	1.403647e-52
MsG0180005388.01	MsG0280009234.01	-0.821806	3.318776e-53	2.728304e-50
MsG0180005575.01	MsG0280009234.01	0.812982	3.223442e-51	2.079065e-48
MsG0180005842.01	MsG0280009234.01	0.801149	1.031688e-48	4.891356e-46
MsG0180006000.01	MsG0280009234.01	0.802846	4.620725e-49	2.287254e-46
MsG0180006128.01	MsG0280009234.01	0.815465	9.119885e-52	6.292691e-49
MsG0180006235.01	MsG0280009234.01	0.813689	2.254021e-51	1.482045e-48
MsG0280006311.01	MsG0280009234.01	0.814656	1.378445e-51	9.303815e-49
MsG0280007089.01	MsG0280009234.01	0.813853	2.073960e-51	1.369670e-48
MsG0280007392.01	MsG0280009234.01	0.805010	1.640935e-49	8.586367e-47
MsG0280008280.01	MsG0280009234.01	0.841572	4.379957e-58	6.462820e-55
MsG0280008909.01	MsG0280009234.01	0.807870	4.092173e-50	2.304995e-47
MsG0280009234.01	MsG0280009514.01	0.811161	8.040901e-51	4.941033e-48
MsG0280009234.01	MsG0280010491.01	0.800994	1.109770e-48	5.241277e-46
MsG0280009234.01	MsG0280010554.01	0.829674	4.511235e-55	4.649346e-52
MsG0280009234.01	MsG0280011003.01	0.835220	1.904838e-56	2.314311e-53
MsG0280009234.01	MsG0280011013.01	0.837338	5.514485e-57	7.140745e-54
MsG0280009234.01	MsG0280011014.01	0.814169	1.766713e-51	1.176808e-48
MsG0280009234.01	MsG0280011258.01	0.822756	1.997923e-53	1.687590e-50
MsG0280009234.01	MsG0280011282.01	0.832860	7.429594e-56	8.409353e-53
MsG0280009234.01	MsG0380012471.01	0.839097	1.942302e-57	2.654388e-54
MsG0280009234.01	MsG0380013834.01	0.816902	4.353186e-52	3.123984e-49
MsG0280009234.01	MsG0380014289.01	0.835116	2.023806e-56	2.450842e-53
MsG0280009234.01	MsG0380015713.01	0.813645	2.305083e-51	1.513800e-48
MsG0280009234.01	MsG0380015805.01	0.845305	4.413439e-59	7.323531e-56
MsG0280009234.01	MsG0380016517.01	0.803301	3.721288e-49	1.863393e-46
MsG0280009234.01	MsG0380016561.01	0.807804	4.225862e-50	2.376271e-47
MsG0280009234.01	MsG0380016752.01	0.807380	5.199926e-50	2.891956e-47
MsG0280009234.01	MsG0380016971.01	0.831043	2.087966e-55	2.239330e-52
MsG0280009234.01	MsG0380017049.01	0.824789	6.671975e-54	5.970402e-51
MsG0280009234.01	MsG0380017375.01	0.811690	6.171551e-51	3.845546e-48
MsG0280009234.01	MsG0480018397.01	0.806989	6.292743e-50	3.464226e-47
MsG0280009234.01	MsG0480018919.01	0.826946	2.052181e-54	1.952959e-51
MsG0280009234.01	MsG0480019276.01	0.847569	1.064586e-59	1.900190e-56
MsG0280009234.01	MsG0480021465.01	0.811053	8.483435e-51	5.198504e-48
MsG0280009234.01	MsG0480022164.01	0.839918	1.188817e-57	1.666279e-54
MsG0280009234.01	MsG0480023130.01	0.800232	1.587017e-48	7.351044e-46
MsG0280009234.01	MsG0480023341.01	0.808500	3.003768e-50	1.720319e-47
MsG0280009234.01	MsG0480023412.01	0.801132	1.040313e-48	4.930110e-46
MsG0280009234.01	MsG0480023600.01	0.850124	2.080076e-60	4.032684e-57
MsG0280009234.01	MsG0480023873.01	0.802392	5.734316e-49	2.805778e-46
MsG0280009234.01	MsG0580024035.01	0.820319	7.304808e-53	5.760824e-50
MsG0280009234.01	MsG0580024353.01	0.807324	5.342900e-50	2.967192e-47
MsG0280009234.01	MsG0580024489.01	0.828023	1.131681e-54	1.111402e-51
MsG0280009234.01	MsG0580025766.01	0.821864	3.218727e-53	2.650407e-50
MsG0280009234.01	MsG0580026059.01	0.809505	1.830282e-50	1.076530e-47
MsG0280009234.01	MsG0580028176.01	0.803111	4.073927e-49	2.030040e-46
MsG0280009234.01	MsG0580029541.01	0.809919	1.490992e-50	8.866369e-48
MsG0280009234.01	MsG0580029640.01	0.820948	5.238055e-53	4.203996e-50
MsG0280009234.01	MsG0580029712.01	0.805652	1.203516e-49	6.402579e-47
MsG0280009234.01	MsG0680031506.01	0.802074	6.667705e-49	3.236008e-46
MsG0280009234.01	MsG0680034392.01	0.811829	5.756609e-51	3.600307e-48
MsG0280009234.01	MsG0680034598.01	0.814211	1.729607e-51	1.153376e-48
MsG0280009234.01	MsG0680035346.01	0.853062	3.062753e-61	6.534000e-58
MsG0280009234.01	MsG0680035475.01	0.826811	2.210294e-54	2.095077e-51
MsG0280009234.01	MsG0780036663.01	0.829113	6.172686e-55	6.257492e-52
MsG0280009234.01	MsG0780036815.01	0.807139	5.849173e-50	3.232527e-47
MsG0280009234.01	MsG0780036836.01	0.816614	5.051058e-52	3.596266e-49
MsG0280009234.01	MsG0780037918.01	0.807526	4.840863e-50	2.702521e-47
MsG0280009234.01	MsG0780037942.01	0.803616	3.202735e-49	1.616820e-46
MsG0280009234.01	MsG0780039137.01	0.837370	5.411229e-57	7.013745e-54
MsG0280009234.01	MsG0780039866.01	0.800621	1.322371e-48	6.186007e-46
MsG0280009234.01	MsG0780040044.01	0.817381	3.395696e-52	2.469230e-49
MsG0280009234.01	MsG0780040160.01	0.810509	1.112552e-50	6.718910e-48
MsG0280009234.01	MsG0780040488.01	0.809517	1.820026e-50	1.070830e-47
MsG0280009234.01	MsG0780040841.01	0.841501	4.572619e-58	6.732358e-55
MsG0280009234.01	MsG0780040845.01	0.801032	1.090339e-48	5.154300e-46
MsG0280009234.01	MsG0780040896.01	0.829137	6.090266e-55	6.178352e-52
MsG0280009234.01	MsG0780041535.01	0.819957	8.838120e-53	6.900762e-50
MsG0280009234.01	MsG0780041559.01	0.826325	2.886675e-54	2.698481e-51
MsG0280009234.01	MsG0780041667.01	0.837093	6.370561e-57	8.187651e-54
MsG0280009234.01	MsG0780041739.01	0.807963	3.909821e-50	2.207703e-47
MsG0280009234.01	MsG0780041796.01	0.828801	7.345421e-55	7.378214e-52
MsG0280009234.01	MsG0880041860.01	0.818619	1.783472e-52	1.341603e-49
MsG0280009234.01	MsG0880041896.01	0.817064	4.002162e-52	2.884960e-49
MsG0280009234.01	MsG0880042518.01	0.801091	1.060298e-48	5.019823e-46
MsG0280009234.01	MsG0880042552.01	0.830558	2.745277e-55	2.902349e-52
MsG0280009234.01	MsG0880042779.01	0.817017	4.102061e-52	2.953217e-49
MsG0280009234.01	MsG0880042961.01	0.807324	5.343852e-50	2.967697e-47
MsG0280009234.01	MsG0880043516.01	0.804346	2.257200e-49	1.161087e-46
MsG0280009234.01	MsG0880043592.01	0.811886	5.593726e-51	3.503684e-48
MsG0280009234.01	MsG0880045118.01	0.804686	1.917253e-49	9.949059e-47
MsG0280009234.01	MsG0880045145.01	0.807575	4.728125e-50	2.642720e-47
MsG0280009234.01	MsG0880045393.01	0.803336	3.659069e-49	1.833924e-46
MsG0280009234.01	MsG0880045506.01	0.813851	2.076136e-51	1.371054e-48
MsG0280009234.01	MsG0880046012.01	0.806503	7.971761e-50	4.333985e-47
MsG0280009234.01	MsG0880047012.01	0.827949	1.179457e-54	1.155744e-51
MsG0280009234.01	MsG0880047226.01	0.814005	1.919619e-51	1.273031e-48
MsG0280009234.01	MsG0880047472.01	0.813162	2.942392e-51	1.906992e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009234.01.T01	MTR_2g055990	95.785	261	8	2	1	260	1	259	0.0	516
MsG0280009234.01.T01	MTR_4g112370	75.000	256	49	5	8	260	17	260	8.11e-130	368
MsG0280009234.01.T01	MTR_2g054380	68.852	183	55	2	78	260	90	270	1.34e-84	254
MsG0280009234.01.T01	MTR_1g053130	58.382	173	67	2	93	260	112	284	5.21e-59	189
MsG0280009234.01.T01	MTR_3g094830	44.643	168	88	4	94	260	96	259	1.35e-47	159
MsG0280009234.01.T01	MTR_8g040690	43.787	169	87	4	94	260	85	247	2.34e-46	155
MsG0280009234.01.T01	MTR_8g040680	43.195	169	88	4	94	260	95	257	2.24e-44	150
MsG0280009234.01.T01	MTR_3g101300	45.000	180	89	5	86	259	60	235	3.23e-44	149
MsG0280009234.01.T01	MTR_7g064810	45.732	164	82	4	97	259	65	222	5.69e-39	135
MsG0280009234.01.T01	MTR_3g086740	36.723	177	103	5	87	259	71	242	6.87e-32	117
MsG0280009234.01.T01	MTR_8g089865	37.576	165	96	5	99	259	59	220	1.07e-29	111

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009234.01.T01	AT5G23100	55.282	284	92	6	4	260	2	277	4.73e-93	275
MsG0280009234.01.T01	AT3G25640	67.797	177	47	3	92	260	93	267	3.25e-79	240
MsG0280009234.01.T01	AT3G25640	67.797	177	47	3	92	260	119	293	3.34e-79	241
MsG0280009234.01.T01	AT2G41660	53.409	176	71	4	93	260	125	297	3.88e-59	190
MsG0280009234.01.T01	AT4G39610	44.186	172	88	2	95	260	95	264	3.21e-51	168
MsG0280009234.01.T01	AT5G06990	47.727	176	79	4	94	260	90	261	7.17e-50	165
MsG0280009234.01.T01	AT2G21990	45.509	167	87	2	94	260	90	252	1.26e-49	164
MsG0280009234.01.T01	AT2G37880	46.988	166	83	3	97	259	81	244	3.57e-45	152
MsG0280009234.01.T01	AT5G42680	47.239	163	79	4	99	259	79	236	3.90e-43	147
MsG0280009234.01.T01	AT5G42680	47.239	163	79	4	99	259	79	236	3.90e-43	147
MsG0280009234.01.T01	AT1G21050	42.945	163	84	3	99	259	89	244	3.26e-39	137
MsG0280009234.01.T01	AT1G21050	42.945	163	84	3	99	259	125	280	6.66e-39	137
MsG0280009234.01.T01	AT5G65340	42.012	169	86	4	99	259	85	249	4.13e-34	124
MsG0280009234.01.T01	AT1G76610	44.048	168	77	4	94	259	73	225	4.41e-34	123
MsG0280009234.01.T01	AT2G22460	40.491	163	90	3	97	258	85	241	4.79e-30	113

Find 65 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGGTTCGCGAAATGGCATC+TGG	0.291635	2:-48447543	MsG0280009234.01.T01:CDS
CAGTGGTTTGGTTCGCGAAA+TGG	0.341965	2:-48447550	MsG0280009234.01.T01:CDS
GGCCTTGGTTCCCGTGTAGT+TGG	0.378975	2:-48447669	MsG0280009234.01.T01:CDS
GTTATACCAGGGACTGATAA+TGG	0.382078	2:-48447330	MsG0280009234.01.T01:CDS
TCGAACACACCTTTCGGCCT+TGG	0.390231	2:-48447684	MsG0280009234.01.T01:CDS
TGTTGCAAGCTCAATCAAAA+AGG	0.391243	2:+48447578	None:intergenic
TCAGGAACACCATTGCTATC+AGG	0.394368	2:+48447210	None:intergenic
GCAAAGTTTGAGAGAATTGT+TGG	0.396020	2:-48447267	MsG0280009234.01.T01:CDS
CCTCCTTGTTGCATGTGCAC+TGG	0.403489	2:+48447770	None:intergenic
CGCTCAGCTCTCACCGTGTT+CGG	0.408847	2:-48447717	MsG0280009234.01.T01:CDS
CGTGTAGTTGGAACACTCTT+CGG	0.416184	2:-48447657	MsG0280009234.01.T01:CDS
AACCGGTCGAACACACCTTT+CGG	0.418706	2:-48447690	MsG0280009234.01.T01:CDS
TGCAACACCGATCAGTGGTT+TGG	0.422361	2:-48447562	MsG0280009234.01.T01:CDS
TGAGAGCAGTGGCTATTTCA+AGG	0.439057	2:-48447743	MsG0280009234.01.T01:CDS
GGCCGAAAGGTGTGTTCGAC+CGG	0.450421	2:+48447688	None:intergenic
CCGAAGAGAATGCGGGCAAA+AGG	0.452366	2:-48447400	MsG0280009234.01.T01:CDS
ACACCAGCACCCATTGAAAT+CGG	0.454573	2:+48447351	None:intergenic
TGGGTCAGTAAGAATTGCTC+TGG	0.468506	2:-48447523	MsG0280009234.01.T01:CDS
TCACCGTGTTCGGCAAGAAC+CGG	0.473449	2:-48447707	MsG0280009234.01.T01:CDS
AGCAAATAAATACTAAGCTC+AGG	0.482261	2:+48447192	None:intergenic
AGCTGTGGAGCCGATTTCAA+TGG	0.488272	2:-48447361	MsG0280009234.01.T01:CDS
CAAAGTTTGAGAGAATTGTT+GGG	0.491568	2:-48447266	MsG0280009234.01.T01:CDS
ATGGGTGCTGGTGTTATACC+AGG	0.505030	2:-48447342	MsG0280009234.01.T01:CDS
AACAAGGTTGGAACTGAAGA+TGG	0.506695	2:-48447894	MsG0280009234.01.T01:CDS
GAGAATGCGGGCAAAAGGAG+TGG	0.513741	2:-48447395	MsG0280009234.01.T01:CDS
TTTCATTGGACAAACAAGGT+TGG	0.516802	2:-48447906	MsG0280009234.01.T01:CDS
TCTGCTCCATTATCAGTCCC+TGG	0.519108	2:+48447324	None:intergenic
AAGCAGAGAAGAAAAGCTTA+AGG	0.521495	2:-48447482	MsG0280009234.01.T01:CDS
ACTGATAATGGAGCAGAAGC+AGG	0.532733	2:-48447318	MsG0280009234.01.T01:CDS
GCTGTGGAGCCGATTTCAAT+GGG	0.538795	2:-48447360	MsG0280009234.01.T01:CDS
TGGTTCGCGAAATGGCATCT+GGG	0.541090	2:-48447542	MsG0280009234.01.T01:CDS
CGACCGGTTCTTGCCGAACA+CGG	0.544927	2:+48447704	None:intergenic
TGGAGCAGAAGCAGGACAAG+AGG	0.545912	2:-48447310	MsG0280009234.01.T01:CDS
GAGCCGATTTCAATGGGTGC+TGG	0.554131	2:-48447354	MsG0280009234.01.T01:CDS
CGAAGAGTGTTCCAACTACA+CGG	0.554132	2:+48447658	None:intergenic
GGATAAGAAAGAGGCTGACA+AGG	0.563529	2:-48447826	MsG0280009234.01.T01:CDS
TGACAAGGTTGTTGATCCTG+AGG	0.564550	2:-48447811	MsG0280009234.01.T01:CDS
TATTGCAATGGCAAGAAATG+TGG	0.567073	2:-48447432	MsG0280009234.01.T01:CDS
TCAGAAGGAGGATAAGAAAG+AGG	0.581589	2:-48447835	MsG0280009234.01.T01:CDS
GGAGCAGAAGCAGGACAAGA+GGG	0.589548	2:-48447309	MsG0280009234.01.T01:CDS
TTGCTAACCGAAGAGAATGC+GGG	0.590108	2:-48447407	MsG0280009234.01.T01:CDS
GTAGCAACTGATGAAACCTC+AGG	0.592839	2:+48447795	None:intergenic
TTCGACGCTCATTCAGAAGG+AGG	0.595692	2:-48447847	MsG0280009234.01.T01:CDS
ACACTCTTCGGATACAGACG+TGG	0.614842	2:-48447645	MsG0280009234.01.T01:CDS
AGGGTGAACTTATGTACATG+AGG	0.615478	2:-48447290	MsG0280009234.01.T01:CDS
GAGCTTGCAACACCGATCAG+TGG	0.615629	2:-48447567	MsG0280009234.01.T01:CDS
CAGCCAGTGCACATGCAACA+AGG	0.617424	2:-48447773	MsG0280009234.01.T01:CDS
AAGGAGGAAGCTGAGAGCAG+TGG	0.617498	2:-48447754	MsG0280009234.01.T01:CDS
AGAATGCGGGCAAAAGGAGT+GGG	0.620572	2:-48447394	MsG0280009234.01.T01:CDS
GTGGGATATTCTCAAAGCTG+TGG	0.621077	2:-48447376	MsG0280009234.01.T01:CDS
TTTGCTAACCGAAGAGAATG+CGG	0.625223	2:-48447408	MsG0280009234.01.T01:CDS
TTCCAACTACACGGGAACCA+AGG	0.626208	2:+48447667	None:intergenic
ACACGGGAACCAAGGCCGAA+AGG	0.631113	2:+48447675	None:intergenic
TCGCGAACCAAACCACTGAT+CGG	0.634720	2:+48447555	None:intergenic
GGTTGCTTGAAGAGCCTCAG+TGG	0.639061	2:-48447461	MsG0280009234.01.T01:CDS
TGCTTGAAGAGCCTCAGTGG+AGG	0.649149	2:-48447458	MsG0280009234.01.T01:CDS
CAGTGGAGGACATATTGCAA+TGG	0.652311	2:-48447444	MsG0280009234.01.T01:CDS
AATTGCTCTGGAATGTGACA+AGG	0.655325	2:-48447511	MsG0280009234.01.T01:CDS
CACTCTTCGGATACAGACGT+GGG	0.655753	2:-48447644	MsG0280009234.01.T01:CDS
GGGTGAACTTATGTACATGA+GGG	0.663670	2:-48447289	MsG0280009234.01.T01:CDS
GAAGAGTGTTCCAACTACAC+GGG	0.678484	2:+48447659	None:intergenic
TGGGTGCTGGTGTTATACCA+GGG	0.691210	2:-48447341	MsG0280009234.01.T01:CDS
TTGCAATATGTCCTCCACTG+AGG	0.726059	2:+48447447	None:intergenic
CCAGTGCACATGCAACAAGG+AGG	0.734108	2:-48447770	MsG0280009234.01.T01:CDS
ATGATGAATCCTGATAGCAA+TGG	0.740095	2:-48447219	MsG0280009234.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTACATTTTGCATTTCAAA+AGG	-	Chr2:48447505-48447524	MsG0280009234.01.T01:CDS	25.0%
	AGCAAATAAATACTAAGCTC+AGG	+	Chr2:48447935-48447954	None:intergenic	30.0%
	CAAAGTTTGAGAGAATTGTT+GGG	-	Chr2:48447858-48447877	MsG0280009234.01.T01:CDS	30.0%
!	ACATTTTCATTGGACAAACA+AGG	-	Chr2:48447214-48447233	MsG0280009234.01.T01:CDS	30.0%
!!	CTTCTAAGAGACATTTTCAT+TGG	-	Chr2:48447204-48447223	MsG0280009234.01.T01:CDS	30.0%
	AAGCAGAGAAGAAAAGCTTA+AGG	-	Chr2:48447642-48447661	MsG0280009234.01.T01:CDS	35.0%
	ATGATGAATCCTGATAGCAA+TGG	-	Chr2:48447905-48447924	MsG0280009234.01.T01:CDS	35.0%
	CTCAATCAAAAAGGCTTCTT+GGG	+	Chr2:48447540-48447559	None:intergenic	35.0%
	GCAAAGTTTGAGAGAATTGT+TGG	-	Chr2:48447857-48447876	MsG0280009234.01.T01:CDS	35.0%
	TATTGCAATGGCAAGAAATG+TGG	-	Chr2:48447692-48447711	MsG0280009234.01.T01:CDS	35.0%
	TGTTGCAAGCTCAATCAAAA+AGG	+	Chr2:48447549-48447568	None:intergenic	35.0%
	TTTCATTGGACAAACAAGGT+TGG	-	Chr2:48447218-48447237	MsG0280009234.01.T01:CDS	35.0%
	AAAAAGGCTTCTTGGGAAGT+TGG	+	Chr2:48447533-48447552	None:intergenic	40.0%
	AACAAGGTTGGAACTGAAGA+TGG	-	Chr2:48447230-48447249	MsG0280009234.01.T01:CDS	40.0%
	AGGGTGAACTTATGTACATG+AGG	-	Chr2:48447834-48447853	MsG0280009234.01.T01:CDS	40.0%
	GCTCAATCAAAAAGGCTTCT+TGG	+	Chr2:48447541-48447560	None:intergenic	40.0%
	GGGTGAACTTATGTACATGA+GGG	-	Chr2:48447835-48447854	MsG0280009234.01.T01:CDS	40.0%
	GTTATACCAGGGACTGATAA+TGG	-	Chr2:48447794-48447813	MsG0280009234.01.T01:CDS	40.0%
	TCAGAAGGAGGATAAGAAAG+AGG	-	Chr2:48447289-48447308	MsG0280009234.01.T01:CDS	40.0%
	TTTGCTAACCGAAGAGAATG+CGG	-	Chr2:48447716-48447735	MsG0280009234.01.T01:CDS	40.0%
!!	AATTGCTCTGGAATGTGACA+AGG	-	Chr2:48447613-48447632	MsG0280009234.01.T01:CDS	40.0%
	ACACCAGCACCCATTGAAAT+CGG	+	Chr2:48447776-48447795	None:intergenic	45.0%
	CAGTGGAGGACATATTGCAA+TGG	-	Chr2:48447680-48447699	MsG0280009234.01.T01:CDS	45.0%
	CGTGTAGTTGGAACACTCTT+CGG	-	Chr2:48447467-48447486	MsG0280009234.01.T01:CDS	45.0%
	GGATAAGAAAGAGGCTGACA+AGG	-	Chr2:48447298-48447317	MsG0280009234.01.T01:CDS	45.0%
	GTAGCAACTGATGAAACCTC+AGG	+	Chr2:48447332-48447351	None:intergenic	45.0%
	GTGGGATATTCTCAAAGCTG+TGG	-	Chr2:48447748-48447767	MsG0280009234.01.T01:CDS	45.0%
	TCAGGAACACCATTGCTATC+AGG	+	Chr2:48447917-48447936	None:intergenic	45.0%
	TGACAAGGTTGTTGATCCTG+AGG	-	Chr2:48447313-48447332	MsG0280009234.01.T01:CDS	45.0%
	TGGGTCAGTAAGAATTGCTC+TGG	-	Chr2:48447601-48447620	MsG0280009234.01.T01:CDS	45.0%
	TTGCAATATGTCCTCCACTG+AGG	+	Chr2:48447680-48447699	None:intergenic	45.0%
	TTGCTAACCGAAGAGAATGC+GGG	-	Chr2:48447717-48447736	MsG0280009234.01.T01:CDS	45.0%
!	GTTTTCGACGCTCATTCAGA+AGG	-	Chr2:48447274-48447293	MsG0280009234.01.T01:CDS	45.0%
!	TGAGAGCAGTGGCTATTTCA+AGG	-	Chr2:48447381-48447400	MsG0280009234.01.T01:CDS	45.0%
!!	ACTGATAATGGAGCAGAAGC+AGG	-	Chr2:48447806-48447825	MsG0280009234.01.T01:CDS	45.0%
!!	CGAAGAGTGTTCCAACTACA+CGG	+	Chr2:48447469-48447488	None:intergenic	45.0%
!!	GAAGAGTGTTCCAACTACAC+GGG	+	Chr2:48447468-48447487	None:intergenic	45.0%
	AACCGGTCGAACACACCTTT+CGG	-	Chr2:48447434-48447453	MsG0280009234.01.T01:CDS	50.0%
	ACACTCTTCGGATACAGACG+TGG	-	Chr2:48447479-48447498	MsG0280009234.01.T01:CDS	50.0%
	AGAATGCGGGCAAAAGGAGT+GGG	-	Chr2:48447730-48447749	MsG0280009234.01.T01:CDS	50.0%
	CACTCTTCGGATACAGACGT+GGG	-	Chr2:48447480-48447499	MsG0280009234.01.T01:CDS	50.0%
	TCGCGAACCAAACCACTGAT+CGG	+	Chr2:48447572-48447591	None:intergenic	50.0%
	TCTGCTCCATTATCAGTCCC+TGG	+	Chr2:48447803-48447822	None:intergenic	50.0%
	TGCAACACCGATCAGTGGTT+TGG	-	Chr2:48447562-48447581	MsG0280009234.01.T01:CDS	50.0%
	TGGTTCGCGAAATGGCATCT+GGG	-	Chr2:48447582-48447601	MsG0280009234.01.T01:CDS	50.0%
	TTCCAACTACACGGGAACCA+AGG	+	Chr2:48447460-48447479	None:intergenic	50.0%
	TTCGACGCTCATTCAGAAGG+AGG	-	Chr2:48447277-48447296	MsG0280009234.01.T01:CDS	50.0%
!	AGCTGTGGAGCCGATTTCAA+TGG	-	Chr2:48447763-48447782	MsG0280009234.01.T01:CDS	50.0%
!	CCTTTTGCCCGCATTCTCTT+CGG	+	Chr2:48447727-48447746	None:intergenic	50.0%
!	GCTGTGGAGCCGATTTCAAT+GGG	-	Chr2:48447764-48447783	MsG0280009234.01.T01:CDS	50.0%
!	TTGGTTCGCGAAATGGCATC+TGG	-	Chr2:48447581-48447600	MsG0280009234.01.T01:CDS	50.0%
!!	ATGGGTGCTGGTGTTATACC+AGG	-	Chr2:48447782-48447801	MsG0280009234.01.T01:CDS	50.0%
!!	CAGTGGTTTGGTTCGCGAAA+TGG	-	Chr2:48447574-48447593	MsG0280009234.01.T01:CDS	50.0%
!!	TGGGTGCTGGTGTTATACCA+GGG	-	Chr2:48447783-48447802	MsG0280009234.01.T01:CDS	50.0%
	AAGGAGGAAGCTGAGAGCAG+TGG	-	Chr2:48447370-48447389	MsG0280009234.01.T01:CDS	55.0%
	CAGCCAGTGCACATGCAACA+AGG	-	Chr2:48447351-48447370	MsG0280009234.01.T01:CDS	55.0%
	CCAGTGCACATGCAACAAGG+AGG	-	Chr2:48447354-48447373	MsG0280009234.01.T01:CDS	55.0%
	CCGAAGAGAATGCGGGCAAA+AGG	-	Chr2:48447724-48447743	MsG0280009234.01.T01:CDS	55.0%
	CCTCCTTGTTGCATGTGCAC+TGG	+	Chr2:48447357-48447376	None:intergenic	55.0%
	GAGAATGCGGGCAAAAGGAG+TGG	-	Chr2:48447729-48447748	MsG0280009234.01.T01:CDS	55.0%
	GAGCTTGCAACACCGATCAG+TGG	-	Chr2:48447557-48447576	MsG0280009234.01.T01:CDS	55.0%
	GGAGCAGAAGCAGGACAAGA+GGG	-	Chr2:48447815-48447834	MsG0280009234.01.T01:CDS	55.0%
	GGTTGCTTGAAGAGCCTCAG+TGG	-	Chr2:48447663-48447682	MsG0280009234.01.T01:CDS	55.0%
	TCACCGTGTTCGGCAAGAAC+CGG	-	Chr2:48447417-48447436	MsG0280009234.01.T01:CDS	55.0%
	TCGAACACACCTTTCGGCCT+TGG	-	Chr2:48447440-48447459	MsG0280009234.01.T01:CDS	55.0%
	TGCTTGAAGAGCCTCAGTGG+AGG	-	Chr2:48447666-48447685	MsG0280009234.01.T01:CDS	55.0%
	TGGAGCAGAAGCAGGACAAG+AGG	-	Chr2:48447814-48447833	MsG0280009234.01.T01:CDS	55.0%
!	GAGCCGATTTCAATGGGTGC+TGG	-	Chr2:48447770-48447789	MsG0280009234.01.T01:CDS	55.0%
	ACACGGGAACCAAGGCCGAA+AGG	+	Chr2:48447452-48447471	None:intergenic	60.0%
	CGCTCAGCTCTCACCGTGTT+CGG	-	Chr2:48447407-48447426	MsG0280009234.01.T01:CDS	60.0%
	GGCCTTGGTTCCCGTGTAGT+TGG	-	Chr2:48447455-48447474	MsG0280009234.01.T01:CDS	60.0%
!	CGACCGGTTCTTGCCGAACA+CGG	+	Chr2:48447423-48447442	None:intergenic	60.0%
!	GGCCGAAAGGTGTGTTCGAC+CGG	+	Chr2:48447439-48447458	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	48447182	48447964	48447182	ID=MsG0280009234.01;Name=MsG0280009234.01
Chr2	mRNA	48447182	48447964	48447182	ID=MsG0280009234.01.T01;Parent=MsG0280009234.01;Name=MsG0280009234.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|260
Chr2	exon	48447182	48447964	48447182	ID=MsG0280009234.01.T01:exon:44814;Parent=MsG0280009234.01.T01
Chr2	CDS	48447182	48447964	48447182	ID=MsG0280009234.01.T01:cds;Parent=MsG0280009234.01.T01

Gene Sequence

>MsG0280009234.01.T01

ATGGCTAGAAGCTCAAACATGTCTTCTAAGAGACATTTTCATTGGACAAACAAGGTTGGAACTGAAGATGGTGAAGTTCACACTTCAGAATCGTTTTCGACGCTCATTCAGAAGGAGGATAAGAAAGAGGCTGACAAGGTTGTTGATCCTGAGGTTTCATCAGTTGCTACAGCCAGTGCACATGCAACAAGGAGGAAGCTGAGAGCAGTGGCTATTTCAAGGCTTCGCTCAGCTCTCACCGTGTTCGGCAAGAACCGGTCGAACACACCTTTCGGCCTTGGTTCCCGTGTAGTTGGAACACTCTTCGGATACAGACGTGGGCATGTACATTTTGCATTTCAAAAGGATCCAACTTCCCAAGAAGCCTTTTTGATTGAGCTTGCAACACCGATCAGTGGTTTGGTTCGCGAAATGGCATCTGGGTCAGTAAGAATTGCTCTGGAATGTGACAAGGAGAAAGAAGCAGAGAAGAAAAGCTTAAGGTTGCTTGAAGAGCCTCAGTGGAGGACATATTGCAATGGCAAGAAATGTGGATTTGCTAACCGAAGAGAATGCGGGCAAAAGGAGTGGGATATTCTCAAAGCTGTGGAGCCGATTTCAATGGGTGCTGGTGTTATACCAGGGACTGATAATGGAGCAGAAGCAGGACAAGAGGGTGAACTTATGTACATGAGGGCAAAGTTTGAGAGAATTGTTGGGTCTAGAGACTCTGAAGCTTTCTATATGATGAATCCTGATAGCAATGGTGTTCCTGAGCTTAGTATTTATTTGCTTAGAGTCTAG

Protein sequence

>MsG0280009234.01.T01

MARSSNMSSKRHFHWTNKVGTEDGEVHTSESFSTLIQKEDKKEADKVVDPEVSSVATASAHATRRKLRAVAISRLRSALTVFGKNRSNTPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSQEAFLIELATPISGLVREMASGSVRIALECDKEKEAEKKSLRLLEEPQWRTYCNGKKCGFANRRECGQKEWDILKAVEPISMGAGVIPGTDNGAEAGQEGELMYMRAKFERIVGSRDSEAFYMMNPDSNGVPELSIYLLRV*