AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041691.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041691.01.T01 MTR_7g116320 80.214 374 11 6 1 318 1 367 0.0 563
MsG0780041691.01.T01 MTR_7g116320 86.970 330 24 4 1 318 1 323 1.73e-161 453
MsG0780041691.01.T01 MTR_1g079780 45.533 347 120 7 13 313 5 328 6.05e-82 251
MsG0780041691.01.T01 MTR_7g116320 64.945 271 34 5 1 215 1 266 3.65e-67 211
MsG0780041691.01.T01 MTR_7g077120 32.212 208 83 5 63 213 86 292 2.82e-17 81.6
MsG0780041691.01.T01 MTR_8g031100 35.681 213 70 6 54 206 77 282 1.21e-14 73.9
MsG0780041691.01.T01 MTR_1g061530 29.902 204 64 6 66 200 65 258 1.60e-14 73.9
MsG0780041691.01.T01 MTR_8g098390 28.889 225 98 7 63 227 94 316 2.25e-12 67.4
MsG0780041691.01.T01 MTR_6g061670 50.000 62 28 1 142 200 180 241 6.15e-11 62.8
MsG0780041691.01.T01 MTR_6g061670 50.000 62 28 1 142 200 185 246 6.82e-11 62.8
MsG0780041691.01.T01 MTR_4g098460 29.730 148 91 4 64 202 55 198 9.30e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041691.01.T01 AT3G04590 41.193 352 111 13 43 318 80 411 9.20e-52 176
MsG0780041691.01.T01 AT3G04590 43.882 237 64 6 43 220 80 306 1.35e-38 139
MsG0780041691.01.T01 AT5G28590 42.788 208 74 9 121 294 20 216 2.30e-31 117
MsG0780041691.01.T01 AT2G33620 33.679 193 78 4 63 206 94 285 4.57e-21 92.4
MsG0780041691.01.T01 AT2G33620 33.679 193 78 4 63 206 94 285 4.57e-21 92.4
MsG0780041691.01.T01 AT2G33620 33.679 193 78 4 63 206 94 285 4.57e-21 92.4
MsG0780041691.01.T01 AT2G33620 33.679 193 78 4 63 206 94 285 4.57e-21 92.4
MsG0780041691.01.T01 AT4G12080 29.961 257 109 9 66 255 89 341 1.83e-18 85.1
MsG0780041691.01.T01 AT2G45850 33.673 196 74 5 64 208 96 286 6.30e-18 83.6
MsG0780041691.01.T01 AT2G45850 33.673 196 74 5 64 208 96 286 6.30e-18 83.6
MsG0780041691.01.T01 AT4G25320 31.925 213 83 6 50 200 70 282 1.53e-17 83.2
MsG0780041691.01.T01 AT4G17950 28.395 243 96 6 65 233 130 368 1.89e-15 77.0
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 98 282 4.63e-15 75.5
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 98 282 4.63e-15 75.5
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 92 276 5.59e-15 75.1
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 92 276 5.59e-15 75.1
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 92 276 5.59e-15 75.1
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 92 276 5.59e-15 75.1
MsG0780041691.01.T01 AT1G63480 34.872 195 65 7 65 207 92 276 5.59e-15 75.1
MsG0780041691.01.T01 AT2G45850 33.155 187 69 5 64 199 96 277 6.61e-15 73.9
MsG0780041691.01.T01 AT5G62260 30.804 224 77 9 55 206 65 282 1.11e-14 74.7
MsG0780041691.01.T01 AT5G62260 30.804 224 77 9 55 206 65 282 1.11e-14 74.7
MsG0780041691.01.T01 AT5G51590 53.226 62 26 1 142 200 233 294 1.49e-13 71.2
MsG0780041691.01.T01 AT5G46640 32.500 240 85 8 61 233 98 327 2.18e-13 70.5
MsG0780041691.01.T01 AT5G62260 31.604 212 67 9 55 194 65 270 4.36e-12 65.9

Find 137 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATTTATTTATTTATTT+TGG 0.116175 7:-93975282 MsG0780041691.01.T01:three_prime_UTR
TTTGATATTATTTCGCTTAC+TGG 0.134288 7:-93976676 MsG0780041691.01.T01:CDS
GAACTGGACCAGCAGCTTTA+AGG 0.151788 7:+93976554 None:intergenic
AAATCTCATTCTCTCTTTCT+AGG 0.208145 7:-93979121 MsG0780041691.01.T01:intron
CAAATTCTCAATCAGGAATT+TGG 0.241504 7:+93975675 None:intergenic
CGGATGGCGCATACTATAAA+TGG 0.259174 7:+93975566 None:intergenic
GGTATGAAGTCCAGTGATTT+TGG 0.270784 7:-93975813 MsG0780041691.01.T01:intron
GGTGGAAGAAAGAGCTTAAT+TGG 0.350801 7:+93979455 None:intergenic
TTAGCAGCTAGGGCTTGTTC+AGG 0.361515 7:+93979241 None:intergenic
GAGAGAATGAGATTTCTTAG+AGG 0.362002 7:+93979129 None:intergenic
TACCTTATTTATCATGGTAT+AGG 0.366696 7:+93975395 None:intergenic
AGAGCTTAATTGGTTGTCAT+TGG 0.370721 7:+93979465 None:intergenic
TACCTATACCATGATAAATA+AGG 0.371169 7:-93975397 MsG0780041691.01.T01:three_prime_UTR
TATATTTCCCTTCCGTTTCA+AGG 0.373603 7:-93975334 MsG0780041691.01.T01:three_prime_UTR
GTTGCTGGTGTTGTTGTTGT+TGG 0.374911 7:+93979422 None:intergenic
AGAGGTAGACCTAGAAAATA+TGG 0.378143 7:-93979268 MsG0780041691.01.T01:CDS
CTCATTATTGCAGGAAGAAC+AGG 0.378894 7:-93975737 MsG0780041691.01.T01:intron
TGCTTCCTAGCTTAGCTTGT+GGG 0.379329 7:-93975358 MsG0780041691.01.T01:three_prime_UTR
AACTGGACCAGCAGCTTTAA+GGG 0.379611 7:+93976555 None:intergenic
CCTTCTAAGATTACCTGAAC+TGG 0.384145 7:+93976538 None:intergenic
TAACCAGCATGTCTTGAATC+TGG 0.387032 7:+93975846 None:intergenic
CGCTGGAAGAGTCGACTGTT+TGG 0.391063 7:+93975982 None:intergenic
CTACCTCTCTTCCTCTTAGC+TGG 0.391774 7:+93979283 None:intergenic
GGCGAGCCAGCATCAAGTTT+AGG 0.392871 7:-93976011 MsG0780041691.01.T01:CDS
TAAAGCTGCTGGTCCAGTTC+AGG 0.403368 7:-93976551 MsG0780041691.01.T01:intron
TGTTCATCATTTCCTCGGAT+TGG 0.407349 7:+93975954 None:intergenic
GCCATCTCAAATTCTCAATC+AGG 0.415987 7:+93975668 None:intergenic
GACACTAGTGCTGGTGGAAA+AGG 0.420179 7:-93976068 MsG0780041691.01.T01:CDS
CATGTCATTGCTGTTGCTGC+TGG 0.421863 7:-93978871 MsG0780041691.01.T01:CDS
CTTGATGCTGGCTCGCCAAC+TGG 0.422763 7:+93976017 None:intergenic
TTCGCCCTCCGGTTTCATTA+CGG 0.428138 7:+93976644 None:intergenic
GTTGTTGGTGGTTGTGGTGG+TGG 0.428283 7:+93979437 None:intergenic
TAAATATACCTTATTTATCA+TGG 0.429893 7:+93975389 None:intergenic
GTTGTTGTTGTTGGTGGTTG+TGG 0.436641 7:+93979431 None:intergenic
GGTGGGCCCCTTAAAGCTGC+TGG 0.437762 7:-93976562 MsG0780041691.01.T01:CDS
TCCTATGTCCGTAATGAAAC+CGG 0.439359 7:-93976652 MsG0780041691.01.T01:CDS
CAAGTTGTTGAATCATGTAA+TGG 0.441011 7:+93975913 None:intergenic
GTCAGAAGCCACGACCTTAA+CGG 0.450596 7:+93975546 None:intergenic
TGGGGTGATGCAGGCAATGC+AGG 0.457106 7:-93978910 MsG0780041691.01.T01:intron
ATGTGGGACCCATCCGTGTT+TGG 0.457507 7:+93979355 None:intergenic
GCTGGTGTTGTTGTTGTTGG+TGG 0.458412 7:+93979425 None:intergenic
TAATCCCTACAGGTCATTAT+CGG 0.460049 7:-93976116 MsG0780041691.01.T01:intron
ATAGTATGCGCCATCCGTTA+AGG 0.460483 7:-93975560 MsG0780041691.01.T01:three_prime_UTR
AATTCTGATGGACAAATCAT+AGG 0.463502 7:-93976595 MsG0780041691.01.T01:CDS
TGGTCATAGCCTCCATTCTC+GGG 0.466277 7:+93975695 None:intergenic
GGTTCGATGGCACCAATGTC+TGG 0.467018 7:-93975640 MsG0780041691.01.T01:three_prime_UTR
GAGAATTTGAGATGGCTTGT+GGG 0.469001 7:-93975661 MsG0780041691.01.T01:three_prime_UTR
TCTCACCAGTCTCCCGAGAA+TGG 0.469905 7:-93975707 MsG0780041691.01.T01:CDS
AGCCTCCATTCTCGGGAGAC+TGG 0.470077 7:+93975702 None:intergenic
ATCATAGGTGGTGGTGTTGG+TGG 0.470575 7:-93976580 MsG0780041691.01.T01:CDS
TTCTTAGAGGTGAAAGAAGG+AGG 0.470890 7:+93979142 None:intergenic
TGTAAGAAGTGTAGCTTGGA+TGG 0.471489 7:+93979631 None:intergenic
TTGGTCATAGCCTCCATTCT+CGG 0.475797 7:+93975694 None:intergenic
ATTCTTGTTGTTATCAAGAG+TGG 0.478438 7:+93979183 None:intergenic
TGACTTGATTTGTGCTGCCA+CGG 0.478635 7:+93979500 None:intergenic
GCGGAAGAAGCCACTGAATG+AGG 0.479604 7:+93979325 None:intergenic
CATTACATGATTCAACAACT+TGG 0.485575 7:-93975912 MsG0780041691.01.T01:CDS
GATTTCTTAGAGGTGAAAGA+AGG 0.487496 7:+93979139 None:intergenic
CTTGATGTTCATCATTTCCT+CGG 0.490079 7:+93975949 None:intergenic
TTAGAGGTGAAAGAAGGAGG+AGG 0.495629 7:+93979145 None:intergenic
GCTGGCTCGCCAACTGGTGA+TGG 0.498545 7:+93976023 None:intergenic
ACCTCCCAGGTCTACAGAGT+GGG 0.499164 7:-93975877 MsG0780041691.01.T01:CDS
AAATGATGAACATCAAGCTA+TGG 0.500826 7:-93975943 MsG0780041691.01.T01:CDS
CTCAGCTTGAACCAGCTAAG+AGG 0.502476 7:-93979294 MsG0780041691.01.T01:CDS
AAGACCACCACTTCGCCCTC+CGG 0.503832 7:+93976633 None:intergenic
TTATCAAGAGTGGGTGGAGT+GGG 0.504060 7:+93979193 None:intergenic
CTGAATGAGGGTAAAGTATG+TGG 0.508435 7:+93979338 None:intergenic
TTCTTGTTGTTATCAAGAGT+GGG 0.510115 7:+93979184 None:intergenic
TGCGCCATCCGTTAAGGTCG+TGG 0.515945 7:-93975554 MsG0780041691.01.T01:three_prime_UTR
AAATACATCACAAGTAAATG+AGG 0.517819 7:+93975477 None:intergenic
ATCTTGTAAGAAGTGTAGCT+TGG 0.519210 7:+93979627 None:intergenic
GTTGTTGTTGGTGGTTGTGG+TGG 0.524710 7:+93979434 None:intergenic
GTATGCTTGTCTAATTCTGA+TGG 0.531450 7:-93976607 MsG0780041691.01.T01:CDS
GTTTGCACGTGACACCTCCC+AGG 0.535717 7:-93975890 MsG0780041691.01.T01:CDS
TCCGGTTTCATTACGGACAT+AGG 0.536430 7:+93976651 None:intergenic
GTTCGTCGGAGATGCGGTGG+TGG 0.542289 7:+93979387 None:intergenic
CACTGGACTTCATACCTGAC+AGG 0.545872 7:+93975820 None:intergenic
GGATGGTATACCAAAATCAC+TGG 0.546373 7:+93975803 None:intergenic
TCATAGGTGGTGGTGTTGGT+GGG 0.546536 7:-93976579 MsG0780041691.01.T01:CDS
CATCCAGATTCAAGACATGC+TGG 0.548607 7:-93975849 MsG0780041691.01.T01:CDS
CAAATCATAGGTGGTGGTGT+TGG 0.550092 7:-93976583 MsG0780041691.01.T01:CDS
ATGGAGCAAGCACCTTGAAA+CGG 0.550654 7:+93975322 None:intergenic
CATACTTTACCCTCATTCAG+TGG 0.553520 7:-93979335 MsG0780041691.01.T01:CDS
ACCGTTCGTCGGAGATGCGG+TGG 0.555343 7:+93979384 None:intergenic
CATGCTGGTTATGACCTGTC+AGG 0.555450 7:-93975834 MsG0780041691.01.T01:CDS
CATTGCTGTTGCTGCTGGTG+AGG 0.555993 7:-93978866 MsG0780041691.01.T01:intron
AGCAAGCACCTTGAAACGGA+AGG 0.556073 7:+93975326 None:intergenic
TATAGCCCACAAGCTAAGCT+AGG 0.556445 7:+93975353 None:intergenic
ATGCTTCCTAGCTTAGCTTG+TGG 0.556684 7:-93975359 MsG0780041691.01.T01:three_prime_UTR
TGAGAATTTGAGATGGCTTG+TGG 0.563343 7:-93975662 MsG0780041691.01.T01:three_prime_UTR
GTAAGAAGTGTAGCTTGGAT+GGG 0.563774 7:+93979632 None:intergenic
TCCTCGGATTGGATTCCCGC+TGG 0.565035 7:+93975965 None:intergenic
ATTGCAGGAAGAACAGGTCA+TGG 0.575958 7:-93975731 MsG0780041691.01.T01:intron
CACCTCGTGACAAAGACTGC+TGG 0.581481 7:+93975589 None:intergenic
AATGATGAACATCAAGCTAT+GGG 0.582749 7:-93975942 MsG0780041691.01.T01:CDS
GGAAAAGGTGATCCCTCTGC+TGG 0.584167 7:-93976053 MsG0780041691.01.T01:CDS
TCCTGATTGAGAATTTGAGA+TGG 0.587653 7:-93975669 MsG0780041691.01.T01:exon
AACAAGAAGGACACTAGTGC+TGG 0.587899 7:-93976077 MsG0780041691.01.T01:CDS
TGGAAGAGTCGACTGTTTGG+TGG 0.588873 7:+93975985 None:intergenic
GAGATGGCTTGTGGGTTCGA+TGG 0.589349 7:-93975653 MsG0780041691.01.T01:three_prime_UTR
GAACCAGCTAAGAGGAAGAG+AGG 0.597787 7:-93979286 MsG0780041691.01.T01:CDS
TTGTTGTTATCAAGAGTGGG+TGG 0.598399 7:+93979187 None:intergenic
CGGAAGAAGCCACTGAATGA+GGG 0.600082 7:+93979326 None:intergenic
TGGAAACCTAAACTTGATGC+TGG 0.602657 7:+93976005 None:intergenic
GAAACCGGAGGGCGAAGTGG+TGG 0.603275 7:-93976637 MsG0780041691.01.T01:CDS
AAGAAGGACACTAGTGCTGG+TGG 0.607696 7:-93976074 MsG0780041691.01.T01:CDS
TTTGGTAAAAGACCGTTCGT+CGG 0.610276 7:+93979373 None:intergenic
GATGCAGGCAATGCAGGACA+AGG 0.611195 7:-93978904 MsG0780041691.01.T01:intron
AAGACCGTTCGTCGGAGATG+CGG 0.611771 7:+93979381 None:intergenic
TACAACTGTTAACCAGACAT+TGG 0.620305 7:+93975628 None:intergenic
TTGCAGGAAGAACAGGTCAT+GGG 0.620825 7:-93975730 MsG0780041691.01.T01:intron
CAAAGACTGCTGGTATGTAG+TGG 0.621373 7:+93975599 None:intergenic
AATGAAACCGGAGGGCGAAG+TGG 0.622641 7:-93976640 MsG0780041691.01.T01:CDS
AAACAGTCGACTCTTCCAGC+GGG 0.624900 7:-93975980 MsG0780041691.01.T01:CDS
GATGAACATCAAGCTATGGG+TGG 0.627293 7:-93975939 MsG0780041691.01.T01:CDS
GTTATCAAGAGTGGGTGGAG+TGG 0.627711 7:+93979192 None:intergenic
CACCTCCCAGGTCTACAGAG+TGG 0.633953 7:-93975878 MsG0780041691.01.T01:CDS
ACCACCGCATCTCCGACGAA+CGG 0.636034 7:-93979385 MsG0780041691.01.T01:CDS
GCAAGCACCTTGAAACGGAA+GGG 0.638256 7:+93975327 None:intergenic
TGAATGAGGGTAAAGTATGT+GGG 0.641240 7:+93979339 None:intergenic
TGATGGCAACTTACCAGCAG+AGG 0.643200 7:+93976040 None:intergenic
GGTAAGTTGCCATCACCAGT+TGG 0.643376 7:-93976032 MsG0780041691.01.T01:CDS
ACTGGACCAGCAGCTTTAAG+GGG 0.646372 7:+93976556 None:intergenic
GATGGCAACTTACCAGCAGA+GGG 0.646608 7:+93976041 None:intergenic
CACCAGTCTCCCGAGAATGG+AGG 0.648200 7:-93975704 MsG0780041691.01.T01:CDS
CCTCCCAGGTCTACAGAGTG+GGG 0.652955 7:-93975876 MsG0780041691.01.T01:CDS
GAAGCCACGACCTTAACGGA+TGG 0.655831 7:+93975550 None:intergenic
TCTGATGGACAAATCATAGG+TGG 0.664275 7:-93976592 MsG0780041691.01.T01:CDS
TCCAGCGGGAATCCAATCCG+AGG 0.670950 7:-93975966 MsG0780041691.01.T01:CDS
GATGGACAAATCATAGGTGG+TGG 0.676431 7:-93976589 MsG0780041691.01.T01:CDS
ATGTCCGTAATGAAACCGGA+GGG 0.676572 7:-93976648 MsG0780041691.01.T01:CDS
TATGTCCGTAATGAAACCGG+AGG 0.677990 7:-93976649 MsG0780041691.01.T01:CDS
CTCCCAGGTCTACAGAGTGG+GGG 0.684142 7:-93975875 MsG0780041691.01.T01:CDS
CAAACAGTCGACTCTTCCAG+CGG 0.690163 7:-93975981 MsG0780041691.01.T01:CDS
TACCAGCAGTCTTTGTCACG+AGG 0.704449 7:-93975591 MsG0780041691.01.T01:three_prime_UTR
CCCCACTCTGTAGACCTGGG+AGG 0.709027 7:+93975876 None:intergenic
TTCAAGCTGAGAAGAAACAG+CGG 0.720213 7:+93979306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTATTTATTTATTT+TGG - Chr7:93979621-93979640 MsG0780041691.01.T01:five_prime_UTR 0.0%
!! AAATTCAAAGTAATATAAAT+AGG + Chr7:93977543-93977562 None:intergenic 10.0%
!! AAGAGAAAAATAAAAAAATA+TGG + Chr7:93977784-93977803 None:intergenic 10.0%
!! ATAAAAAATATGAAAAAGAA+TGG + Chr7:93979603-93979622 None:intergenic 10.0%
!! TGTTATAAATATAGATATTT+CGG - Chr7:93978662-93978681 MsG0780041691.01.T01:intron 10.0%
!! TTAAATAATCTTAAACAAAA+TGG + Chr7:93976218-93976237 None:intergenic 10.0%
!!! AAATTATATTTGTTTTTCAA+TGG + Chr7:93976609-93976628 None:intergenic 10.0%
!!! TTATTTATTTTGGAAATTTA+GGG - Chr7:93979631-93979650 MsG0780041691.01.T01:five_prime_UTR 10.0%
!!! TTTATTTATTTTGGAAATTT+AGG - Chr7:93979630-93979649 MsG0780041691.01.T01:five_prime_UTR 10.0%
!! AAAAATAAAAAAATATGGAC+GGG + Chr7:93977779-93977798 None:intergenic 15.0%
!! ATTAATCAAAAATAACTTCT+TGG + Chr7:93978764-93978783 None:intergenic 15.0%
!! GAAAAATAAAAAAATATGGA+CGG + Chr7:93977780-93977799 None:intergenic 15.0%
!! GATGTATTTAAAAATTAGAA+TGG - Chr7:93979440-93979459 MsG0780041691.01.T01:CDS 15.0%
!! TGCTTGTTTATTATTATAAA+AGG - Chr7:93976379-93976398 MsG0780041691.01.T01:intron 15.0%
!!! CATTTTAGTTTTTTTTTTGA+GGG - Chr7:93976247-93976266 MsG0780041691.01.T01:intron 15.0%
!!! CTTAATTTTATTTAGTTTGA+TGG - Chr7:93975961-93975980 MsG0780041691.01.T01:CDS 15.0%
!!! GTTGATCTTTTTAATTTTTT+AGG - Chr7:93978131-93978150 MsG0780041691.01.T01:intron 15.0%
!!! TAAATATACCTTATTTATCA+TGG + Chr7:93979517-93979536 None:intergenic 15.0%
!!! TCATTTTAGTTTTTTTTTTG+AGG - Chr7:93976246-93976265 MsG0780041691.01.T01:intron 15.0%
!!! TTTTAACAAACTTAAACAAA+CGG - Chr7:93976554-93976573 MsG0780041691.01.T01:CDS 15.0%
!! AAAATAAAAAAATATGGACG+GGG + Chr7:93977778-93977797 None:intergenic 20.0%
!! AAATTGTGTCTATATTAGAT+TGG - Chr7:93978020-93978039 MsG0780041691.01.T01:intron 20.0%
!! AGAAATATTCTTATAAGAAG+TGG + Chr7:93977965-93977984 None:intergenic 20.0%
!! GAAATATTCTTATAAGAAGT+GGG + Chr7:93977964-93977983 None:intergenic 20.0%
!! TAAAATGTAAAGATAAACCT+TGG + Chr7:93977639-93977658 None:intergenic 20.0%
!! TATTTAAAAATTAGAATGGC+TGG - Chr7:93979444-93979463 MsG0780041691.01.T01:CDS 20.0%
!! TGATTGATTATCATAATTCA+AGG - Chr7:93975922-93975941 MsG0780041691.01.T01:CDS 20.0%
!! TTGGAGAAATAATCAATTAT+TGG - Chr7:93976647-93976666 MsG0780041691.01.T01:CDS 20.0%
!! TTTAACAAACTTAAACAAAC+GGG - Chr7:93976555-93976574 MsG0780041691.01.T01:CDS 20.0%
!!! AATTTTTTAGGTGTATGATT+TGG - Chr7:93978143-93978162 MsG0780041691.01.T01:intron 20.0%
!!! TTTATTTAGTTTGATGGTTA+TGG - Chr7:93975967-93975986 MsG0780041691.01.T01:CDS 20.0%
!!! TTTTTAAGATGCTAATTTCT+TGG - Chr7:93976820-93976839 MsG0780041691.01.T01:intron 20.0%
! AAACAATCTTCAAAAGGAAA+CGG - Chr7:93977451-93977470 MsG0780041691.01.T01:intron 25.0%
! AAATACATCACAAGTAAATG+AGG + Chr7:93979429-93979448 None:intergenic 25.0%
! ATTAAGATCCTAAAACATCT+TGG + Chr7:93977087-93977106 None:intergenic 25.0%
! ATTGCTCAAGTTAATGTATT+TGG - Chr7:93976185-93976204 MsG0780041691.01.T01:intron 25.0%
! ATTTCTCCAAATCTAATCAA+GGG + Chr7:93976637-93976656 None:intergenic 25.0%
! CAATTTATGCAACAAAATAG+GGG - Chr7:93977262-93977281 MsG0780041691.01.T01:intron 25.0%
! CACAAATCAAGTCAAAAAAA+TGG - Chr7:93975412-93975431 MsG0780041691.01.T01:three_prime_UTR 25.0%
! CACTTAATCATGAATTGATT+TGG - Chr7:93975848-93975867 MsG0780041691.01.T01:CDS 25.0%
! GAAAAAGATGAAAACCAAAT+TGG + Chr7:93977178-93977197 None:intergenic 25.0%
! GATTCTTTCTCTAATTTCTA+GGG - Chr7:93975808-93975827 MsG0780041691.01.T01:intron 25.0%
! GCAATTTATGCAACAAAATA+GGG - Chr7:93977261-93977280 MsG0780041691.01.T01:intron 25.0%
! TACCTATACCATGATAAATA+AGG - Chr7:93979506-93979525 MsG0780041691.01.T01:five_prime_UTR 25.0%
! TATTTCTCCAAATCTAATCA+AGG + Chr7:93976638-93976657 None:intergenic 25.0%
! TATTTGAGTATGCATTCAAT+AGG - Chr7:93977219-93977238 MsG0780041691.01.T01:intron 25.0%
! TCTTTAATGCTTTGATATCA+GGG - Chr7:93978200-93978219 MsG0780041691.01.T01:intron 25.0%
! TGAAAACCAAATTGGATAAA+TGG + Chr7:93977170-93977189 None:intergenic 25.0%
! TGAAGATTGTTTGAAGAATA+GGG + Chr7:93977443-93977462 None:intergenic 25.0%
! TGATTCTTTCTCTAATTTCT+AGG - Chr7:93975807-93975826 MsG0780041691.01.T01:intron 25.0%
! TGCAATTTATGCAACAAAAT+AGG - Chr7:93977260-93977279 MsG0780041691.01.T01:intron 25.0%
! TGTGAATGTAATTCATTATC+AGG + Chr7:93978741-93978760 None:intergenic 25.0%
! TTAATAAAAACACTGTACTG+CGG - Chr7:93978099-93978118 MsG0780041691.01.T01:intron 25.0%
! TTATACCATAAGAAAATCAG+TGG + Chr7:93979127-93979146 None:intergenic 25.0%
! TTCTTCAAACAATCTTCAAA+AGG - Chr7:93977445-93977464 MsG0780041691.01.T01:intron 25.0%
! TTCTTTAATGCTTTGATATC+AGG - Chr7:93978199-93978218 MsG0780041691.01.T01:intron 25.0%
! TTGAAGATTGTTTGAAGAAT+AGG + Chr7:93977444-93977463 None:intergenic 25.0%
! TTGCTCAAGTTAATGTATTT+GGG - Chr7:93976186-93976205 MsG0780041691.01.T01:intron 25.0%
! TTTAAGCAAAATATGCTTGT+AGG - Chr7:93977016-93977035 MsG0780041691.01.T01:intron 25.0%
! TTTGATATTATTTCGCTTAC+TGG - Chr7:93978227-93978246 MsG0780041691.01.T01:intron 25.0%
!! AAGTTAATGTATTTGGGTTT+GGG - Chr7:93976192-93976211 MsG0780041691.01.T01:intron 25.0%
!! AGACAATAGCATTTTTCATA+TGG - Chr7:93976788-93976807 MsG0780041691.01.T01:intron 25.0%
!! AGGCAAAACAATATTTTTCA+AGG + Chr7:93979409-93979428 None:intergenic 25.0%
!! ATCCAAGAATAATGCTTTTA+GGG - Chr7:93976899-93976918 MsG0780041691.01.T01:intron 25.0%
!! CTAACCAAAAAAACTTTTTG+TGG - Chr7:93977892-93977911 MsG0780041691.01.T01:intron 25.0%
!! TACCTTATTTATCATGGTAT+AGG + Chr7:93979511-93979530 None:intergenic 25.0%
!! TTATCTTTACATTTTACCCA+TGG - Chr7:93977643-93977662 MsG0780041691.01.T01:intron 25.0%
!!! AAAGCTATTTTGATTAGCTT+TGG + Chr7:93976436-93976455 None:intergenic 25.0%
!!! ATTTTTTATGGACAACAAGA+AGG - Chr7:93978813-93978832 MsG0780041691.01.T01:intron 25.0%
!!! CATTATCGGTACATTTTTTA+TGG - Chr7:93978801-93978820 MsG0780041691.01.T01:intron 25.0%
!!! TTGACCACAAAAAGTTTTTT+TGG + Chr7:93977899-93977918 None:intergenic 25.0%
AAATCTCATTCTCTCTTTCT+AGG - Chr7:93975782-93975801 MsG0780041691.01.T01:intron 30.0%
AAATGATGAACATCAAGCTA+TGG - Chr7:93978960-93978979 MsG0780041691.01.T01:intron 30.0%
AATGATGAACATCAAGCTAT+GGG - Chr7:93978961-93978980 MsG0780041691.01.T01:intron 30.0%
ACAGAAACTACAAAAGAAAC+AGG + Chr7:93978483-93978502 None:intergenic 30.0%
ATAAATAGGAATATGAGCCT+TGG + Chr7:93977529-93977548 None:intergenic 30.0%
CAAATTCTCAATCAGGAATT+TGG + Chr7:93979231-93979250 None:intergenic 30.0%
CAAGTTGTTGAATCATGTAA+TGG + Chr7:93978993-93979012 None:intergenic 30.0%
CATTACATGATTCAACAACT+TGG - Chr7:93978991-93979010 MsG0780041691.01.T01:intron 30.0%
GAATGTAATTCATTATCAGG+TGG + Chr7:93978738-93978757 None:intergenic 30.0%
GATTAATAGTTAATCCCTAC+AGG - Chr7:93978777-93978796 MsG0780041691.01.T01:intron 30.0%
GGATATACGTAGTAAATAAG+AGG + Chr7:93976675-93976694 None:intergenic 30.0%
TAACTATGTAGTGAAATCAG+TGG - Chr7:93978606-93978625 MsG0780041691.01.T01:intron 30.0%
TACTTGTGTTAAAGAAACCA+AGG - Chr7:93977619-93977638 MsG0780041691.01.T01:intron 30.0%
TAGCATATTCAATCAACATG+TGG + Chr7:93977694-93977713 None:intergenic 30.0%
TATGCATTCAATAGGATGTT+GGG - Chr7:93977227-93977246 MsG0780041691.01.T01:intron 30.0%
TTTACCTTGTGAATATTGAG+CGG - Chr7:93978440-93978459 MsG0780041691.01.T01:intron 30.0%
TTTCTTCCCTTGATTAGATT+TGG - Chr7:93976628-93976647 MsG0780041691.01.T01:CDS 30.0%
! AAACTTTTTGTGGTCAAATC+TGG - Chr7:93977902-93977921 MsG0780041691.01.T01:intron 30.0%
! AATTCTGATGGACAAATCAT+AGG - Chr7:93978308-93978327 MsG0780041691.01.T01:intron 30.0%
! AGAATATTTCTACCTTCAAG+AGG - Chr7:93977974-93977993 MsG0780041691.01.T01:intron 30.0%
! AGATTTTGAATTTCCCTCTA+TGG - Chr7:93976402-93976421 MsG0780041691.01.T01:intron 30.0%
! AGTTTGATGGTTATGGTAAT+GGG - Chr7:93975974-93975993 MsG0780041691.01.T01:CDS 30.0%
! CAAGTTAATGTATTTGGGTT+TGG - Chr7:93976191-93976210 MsG0780041691.01.T01:intron 30.0%
! CCTTAGTGAAAATAAGTTGA+TGG - Chr7:93976853-93976872 MsG0780041691.01.T01:intron 30.0%
! GATCCAAGAATAATGCTTTT+AGG - Chr7:93976898-93976917 MsG0780041691.01.T01:intron 30.0%
! GATTTTGAATTTCCCTCTAT+GGG - Chr7:93976403-93976422 MsG0780041691.01.T01:intron 30.0%
! TAGTTTGATGGTTATGGTAA+TGG - Chr7:93975973-93975992 MsG0780041691.01.T01:CDS 30.0%
! TCCAAGAATAATGCTTTTAG+GGG - Chr7:93976900-93976919 MsG0780041691.01.T01:intron 30.0%
! TGATTTTGAATTTCTGCATC+TGG - Chr7:93976103-93976122 MsG0780041691.01.T01:CDS 30.0%
! TGTTTGCCATTTATCCAATT+TGG - Chr7:93977161-93977180 MsG0780041691.01.T01:intron 30.0%
! TTTCTGTTATAGCCTTTTTC+TGG - Chr7:93978496-93978515 MsG0780041691.01.T01:intron 30.0%
!! ATTCTTGTTGTTATCAAGAG+TGG + Chr7:93975723-93975742 None:intergenic 30.0%
!! CCATCAACTTATTTTCACTA+AGG + Chr7:93976856-93976875 None:intergenic 30.0%
!! TAATGCCTCTTCATTTTTGT+GGG - Chr7:93979474-93979493 MsG0780041691.01.T01:CDS 30.0%
!! TTCTTGTTGTTATCAAGAGT+GGG + Chr7:93975722-93975741 None:intergenic 30.0%
!!! TTTTTGAGTGATGCTGTTAT+AGG + Chr7:93976962-93976981 None:intergenic 30.0%
!!! TTTTTTGTTCTGCCAGAAAA+AGG + Chr7:93978511-93978530 None:intergenic 30.0%
AAATCAGTGGAATGAAAAGC+AGG - Chr7:93978619-93978638 MsG0780041691.01.T01:intron 35.0%
AATCAGTGGAATGAAAAGCA+GGG - Chr7:93978620-93978639 MsG0780041691.01.T01:intron 35.0%
AGAGCTTAATTGGTTGTCAT+TGG + Chr7:93975441-93975460 None:intergenic 35.0%
AGAGGTAGACCTAGAAAATA+TGG - Chr7:93975635-93975654 MsG0780041691.01.T01:three_prime_UTR 35.0%
ATAAGAAAATCAGTGGAGGA+TGG + Chr7:93979120-93979139 None:intergenic 35.0%
ATATGCATTATGTCTGCATC+TGG - Chr7:93977289-93977308 MsG0780041691.01.T01:intron 35.0%
CAGTGGTAATAATGGCTTAT+GGG - Chr7:93978064-93978083 MsG0780041691.01.T01:intron 35.0%
CTGCAAATGAATTTGTAGGT+TGG - Chr7:93978390-93978409 MsG0780041691.01.T01:intron 35.0%
CTTGATGTTCATCATTTCCT+CGG + Chr7:93978957-93978976 None:intergenic 35.0%
GAGAGAATGAGATTTCTTAG+AGG + Chr7:93975777-93975796 None:intergenic 35.0%
GATTTCTTAGAGGTGAAAGA+AGG + Chr7:93975767-93975786 None:intergenic 35.0%
GCTATTGTCTCAATGAGAAA+TGG + Chr7:93976778-93976797 None:intergenic 35.0%
GGAACTGCAAATGAATTTGT+AGG - Chr7:93978386-93978405 MsG0780041691.01.T01:intron 35.0%
GTAAAACAAATGCAAGACAG+CGG + Chr7:93978425-93978444 None:intergenic 35.0%
GTATGCATTCAATAGGATGT+TGG - Chr7:93977226-93977245 MsG0780041691.01.T01:intron 35.0%
GTATGCTTGTCTAATTCTGA+TGG - Chr7:93978296-93978315 MsG0780041691.01.T01:intron 35.0%
GTTGAGTGTTATCATAACCA+AGG - Chr7:93977509-93977528 MsG0780041691.01.T01:intron 35.0%
TAATCCCTACAGGTCATTAT+CGG - Chr7:93978787-93978806 MsG0780041691.01.T01:intron 35.0%
TAATGCTTTGATATCAGGGT+CGG - Chr7:93978204-93978223 MsG0780041691.01.T01:intron 35.0%
TACAACTGTTAACCAGACAT+TGG + Chr7:93979278-93979297 None:intergenic 35.0%
TACCATAAGAAAATCAGTGG+AGG + Chr7:93979124-93979143 None:intergenic 35.0%
TATATTTCCCTTCCGTTTCA+AGG - Chr7:93979569-93979588 MsG0780041691.01.T01:five_prime_UTR 35.0%
TCCTGATTGAGAATTTGAGA+TGG - Chr7:93979234-93979253 MsG0780041691.01.T01:CDS 35.0%
TGAATGAGGGTAAAGTATGT+GGG + Chr7:93975567-93975586 None:intergenic 35.0%
TTTGGAAGAAAACCCATAGA+GGG + Chr7:93976418-93976437 None:intergenic 35.0%
! AAATCGACTTCTGCCAAAAA+AGG - Chr7:93978552-93978571 MsG0780041691.01.T01:intron 35.0%
! AATCGACTTCTGCCAAAAAA+GGG - Chr7:93978553-93978572 MsG0780041691.01.T01:intron 35.0%
! ATCTTGTAAGAAGTGTAGCT+TGG + Chr7:93975279-93975298 None:intergenic 35.0%
! GTTTGATGGTTATGGTAATG+GGG - Chr7:93975975-93975994 MsG0780041691.01.T01:CDS 35.0%
! TGTGAATTTTCCTGCATCAA+CGG - Chr7:93977123-93977142 MsG0780041691.01.T01:intron 35.0%
! TTTTCTCTTGTCGTAGAATC+AGG - Chr7:93977582-93977601 MsG0780041691.01.T01:intron 35.0%
!! CTAATGCCTCTTCATTTTTG+TGG - Chr7:93979473-93979492 MsG0780041691.01.T01:CDS 35.0%
!! TCCCCTAAAAGCATTATTCT+TGG + Chr7:93976904-93976923 None:intergenic 35.0%
!!! AGAAGCTTTTTTAGCAGCTA+GGG + Chr7:93975675-93975694 None:intergenic 35.0%
!!! ATCCTCCACTGATTTTCTTA+TGG - Chr7:93979119-93979138 MsG0780041691.01.T01:intron 35.0%
!!! TAGAAGCTTTTTTAGCAGCT+AGG + Chr7:93975676-93975695 None:intergenic 35.0%
!!! TCAGGAGTACCATATTTTCT+AGG + Chr7:93975647-93975666 None:intergenic 35.0%
AAAAAAGGGGGAAATGAGGT+GGG - Chr7:93978567-93978586 MsG0780041691.01.T01:intron 40.0%
AATAAGTGCCAAAACAACCG+TGG + Chr7:93976705-93976724 None:intergenic 40.0%
ACAGACCCACAAAAATGAAG+AGG + Chr7:93979482-93979501 None:intergenic 40.0%
AGAACCGCTCAATATTCACA+AGG + Chr7:93978447-93978466 None:intergenic 40.0%
AGATCCTAAAACATCTTGGC+TGG + Chr7:93977083-93977102 None:intergenic 40.0%
AGCGAAGTTCTCATTATTGC+AGG - Chr7:93979157-93979176 MsG0780041691.01.T01:CDS 40.0%
AGGAGGCAACATTATGTATG+AGG - Chr7:93977351-93977370 MsG0780041691.01.T01:intron 40.0%
ATTCATTATCAGGTGGTGCT+TGG + Chr7:93978731-93978750 None:intergenic 40.0%
CATACTTTACCCTCATTCAG+TGG - Chr7:93975568-93975587 MsG0780041691.01.T01:three_prime_UTR 40.0%
CCAGTTCAGGTAATCTTAGA+AGG - Chr7:93978365-93978384 MsG0780041691.01.T01:intron 40.0%
CTCATTATTGCAGGAAGAAC+AGG - Chr7:93979166-93979185 MsG0780041691.01.T01:CDS 40.0%
CTGAATGAGGGTAAAGTATG+TGG + Chr7:93975568-93975587 None:intergenic 40.0%
CTGTTGAAACTTGCAGCATA+TGG - Chr7:93977476-93977495 MsG0780041691.01.T01:intron 40.0%
GCAGTGGTAATAATGGCTTA+TGG - Chr7:93978063-93978082 MsG0780041691.01.T01:intron 40.0%
GCCATCTCAAATTCTCAATC+AGG + Chr7:93979238-93979257 None:intergenic 40.0%
GGATGGTATACCAAAATCAC+TGG + Chr7:93979103-93979122 None:intergenic 40.0%
GGTGGAAGAAAGAGCTTAAT+TGG + Chr7:93975451-93975470 None:intergenic 40.0%
TAACCAGCATGTCTTGAATC+TGG + Chr7:93979060-93979079 None:intergenic 40.0%
TACCCATGGTGTTCCAAAAA+AGG - Chr7:93977657-93977676 MsG0780041691.01.T01:intron 40.0%
TCAAATCTGGATGTGGATGT+TGG - Chr7:93977915-93977934 MsG0780041691.01.T01:intron 40.0%
TCCTATGTCCGTAATGAAAC+CGG - Chr7:93978251-93978270 MsG0780041691.01.T01:intron 40.0%
TGAGAAATGGCTGAGCATAT+CGG + Chr7:93976765-93976784 None:intergenic 40.0%
TGGAAACCTAAACTTGATGC+TGG + Chr7:93978901-93978920 None:intergenic 40.0%
TGGCGAACTTAAAGGAGAAA+GGG + Chr7:93977060-93977079 None:intergenic 40.0%
TGTTCATCATTTCCTCGGAT+TGG + Chr7:93978952-93978971 None:intergenic 40.0%
TTAATGTTAGTGCGTAGCAG+TGG - Chr7:93978047-93978066 MsG0780041691.01.T01:intron 40.0%
TTAGTCCTAGACGAGATATC+AGG - Chr7:93976723-93976742 MsG0780041691.01.T01:intron 40.0%
TTCAAGCTGAGAAGAAACAG+CGG + Chr7:93975600-93975619 None:intergenic 40.0%
TTCTTAGAGGTGAAAGAAGG+AGG + Chr7:93975764-93975783 None:intergenic 40.0%
TTTGGTAAAAGACCGTTCGT+CGG + Chr7:93975533-93975552 None:intergenic 40.0%
TTTGTGGTCAAATCTGGATG+TGG - Chr7:93977908-93977927 MsG0780041691.01.T01:intron 40.0%
! ATCGACTTCTGCCAAAAAAG+GGG - Chr7:93978554-93978573 MsG0780041691.01.T01:intron 40.0%
! ATGTACCGATAATGACCTGT+AGG + Chr7:93978795-93978814 None:intergenic 40.0%
! CTTTGGAAGAAAACCCATAG+AGG + Chr7:93976419-93976438 None:intergenic 40.0%
! GAACGGTCTTTTACCAAACA+CGG - Chr7:93975535-93975554 MsG0780041691.01.T01:three_prime_UTR 40.0%
! GGTATGAAGTCCAGTGATTT+TGG - Chr7:93979090-93979109 MsG0780041691.01.T01:intron 40.0%
! GTAAGAAGTGTAGCTTGGAT+GGG + Chr7:93975274-93975293 None:intergenic 40.0%
! GTCTTTTACCAAACACGGAT+GGG - Chr7:93975540-93975559 MsG0780041691.01.T01:three_prime_UTR 40.0%
! TCTGATGGACAAATCATAGG+TGG - Chr7:93978311-93978330 MsG0780041691.01.T01:intron 40.0%
! TGAGAATTTGAGATGGCTTG+TGG - Chr7:93979241-93979260 MsG0780041691.01.T01:CDS 40.0%
! TGTAAGAAGTGTAGCTTGGA+TGG + Chr7:93975275-93975294 None:intergenic 40.0%
! TGTACCGATAATGACCTGTA+GGG + Chr7:93978794-93978813 None:intergenic 40.0%
! TTGTTGTTATCAAGAGTGGG+TGG + Chr7:93975719-93975738 None:intergenic 40.0%
!! CCTTCTAAGATTACCTGAAC+TGG + Chr7:93978368-93978387 None:intergenic 40.0%
!!! TGCCTTTTTTGGAACACCAT+GGG + Chr7:93977662-93977681 None:intergenic 40.0%
AACAAGAAGGACACTAGTGC+TGG - Chr7:93978826-93978845 MsG0780041691.01.T01:intron 45.0%
AATCTGGATGTGGATGTTGG+AGG - Chr7:93977918-93977937 MsG0780041691.01.T01:intron 45.0%
ACGTATATCCTTAGCCACCA+CGG - Chr7:93976685-93976704 MsG0780041691.01.T01:CDS 45.0%
AGACGAGATATCAGGTTTGG+AGG - Chr7:93976731-93976750 MsG0780041691.01.T01:intron 45.0%
ATAGTATGCGCCATCCGTTA+AGG - Chr7:93979343-93979362 MsG0780041691.01.T01:CDS 45.0%
ATGGAGCAAGCACCTTGAAA+CGG + Chr7:93979584-93979603 None:intergenic 45.0%
ATGTCCGTAATGAAACCGGA+GGG - Chr7:93978255-93978274 MsG0780041691.01.T01:intron 45.0%
ATTATCAGGTGGTGCTTGGT+AGG + Chr7:93978727-93978746 None:intergenic 45.0%
ATTGCAGGAAGAACAGGTCA+TGG - Chr7:93979172-93979191 MsG0780041691.01.T01:CDS 45.0%
CAAAAAAGGGGGAAATGAGG+TGG - Chr7:93978566-93978585 MsG0780041691.01.T01:intron 45.0%
CAAAGACTGCTGGTATGTAG+TGG + Chr7:93979307-93979326 None:intergenic 45.0%
CATCCAGATTCAAGACATGC+TGG - Chr7:93979054-93979073 MsG0780041691.01.T01:intron 45.0%
CCAAACCTGATATCTCGTCT+AGG + Chr7:93976731-93976750 None:intergenic 45.0%
CCTAGACGAGATATCAGGTT+TGG - Chr7:93976728-93976747 MsG0780041691.01.T01:intron 45.0%
CGGATGGCGCATACTATAAA+TGG + Chr7:93979340-93979359 None:intergenic 45.0%
CTACCTTCAAGAGGACAGAT+AGG - Chr7:93977983-93978002 MsG0780041691.01.T01:intron 45.0%
GATGAACATCAAGCTATGGG+TGG - Chr7:93978964-93978983 MsG0780041691.01.T01:intron 45.0%
GATGGACAAATCATAGGTGG+TGG - Chr7:93978314-93978333 MsG0780041691.01.T01:intron 45.0%
GTGCGTAGCAGTGGTAATAA+TGG - Chr7:93978056-93978075 MsG0780041691.01.T01:intron 45.0%
GTGGCGAACTTAAAGGAGAA+AGG + Chr7:93977061-93977080 None:intergenic 45.0%
TAGTCAAACACCGTTGATGC+AGG + Chr7:93977136-93977155 None:intergenic 45.0%
TATAGCCCACAAGCTAAGCT+AGG + Chr7:93979553-93979572 None:intergenic 45.0%
TATGTCCGTAATGAAACCGG+AGG - Chr7:93978254-93978273 MsG0780041691.01.T01:intron 45.0%
TCCGGTTTCATTACGGACAT+AGG + Chr7:93978255-93978274 None:intergenic 45.0%
TCCTAAAACATCTTGGCTGG+TGG + Chr7:93977080-93977099 None:intergenic 45.0%
TCGACTTCTGCCAAAAAAGG+GGG - Chr7:93978555-93978574 MsG0780041691.01.T01:intron 45.0%
TGCCAAAAAAGGGGGAAATG+AGG - Chr7:93978563-93978582 MsG0780041691.01.T01:intron 45.0%
TTAGAGGTGAAAGAAGGAGG+AGG + Chr7:93975761-93975780 None:intergenic 45.0%
TTATCAAGAGTGGGTGGAGT+GGG + Chr7:93975713-93975732 None:intergenic 45.0%
TTGCAGGAAGAACAGGTCAT+GGG - Chr7:93979173-93979192 MsG0780041691.01.T01:CDS 45.0%
TTGGTCATAGCCTCCATTCT+CGG + Chr7:93979212-93979231 None:intergenic 45.0%
! AACTGGACCAGCAGCTTTAA+GGG + Chr7:93978351-93978370 None:intergenic 45.0%
! ATGCTTCCTAGCTTAGCTTG+TGG - Chr7:93979544-93979563 MsG0780041691.01.T01:five_prime_UTR 45.0%
! CAAATCATAGGTGGTGGTGT+TGG - Chr7:93978320-93978339 MsG0780041691.01.T01:intron 45.0%
! GGTCTTTTACCAAACACGGA+TGG - Chr7:93975539-93975558 MsG0780041691.01.T01:three_prime_UTR 45.0%
!! GTTGCTGGTGTTGTTGTTGT+TGG + Chr7:93975484-93975503 None:intergenic 45.0%
!! GTTGTTGTTGTTGGTGGTTG+TGG + Chr7:93975475-93975494 None:intergenic 45.0%
!! TGACTTGATTTGTGCTGCCA+CGG + Chr7:93975406-93975425 None:intergenic 45.0%
!! TGCTTCCTAGCTTAGCTTGT+GGG - Chr7:93979545-93979564 MsG0780041691.01.T01:five_prime_UTR 45.0%
!! TTATGGTAATGGGGTGATGC+AGG - Chr7:93975984-93976003 MsG0780041691.01.T01:CDS 45.0%
!!! CACCTCATTTCCCCCTTTTT+TGG + Chr7:93978568-93978587 None:intergenic 45.0%
!!! GGATGCACAAGTGCCTTTTT+TGG + Chr7:93977673-93977692 None:intergenic 45.0%
!!! GTGCCTTTTTTGGAACACCA+TGG + Chr7:93977663-93977682 None:intergenic 45.0%
!!! TGGAGTTTTGTTGCTGTTGC+TGG + Chr7:93975499-93975518 None:intergenic 45.0%
AAAAATTGCAGCGTCAGCCG+TGG - Chr7:93975386-93975405 MsG0780041691.01.T01:three_prime_UTR 50.0%
AAGTGCCAAAACAACCGTGG+TGG + Chr7:93976702-93976721 None:intergenic 50.0%
ACCTGGTAAGTACAGTGACG+CGG - Chr7:93976133-93976152 MsG0780041691.01.T01:intron 50.0%
AGCAAGCACCTTGAAACGGA+AGG + Chr7:93979580-93979599 None:intergenic 50.0%
ATGTTGCCTCCTGAAGATGC+TGG + Chr7:93977343-93977362 None:intergenic 50.0%
CAAAACAACCGTGGTGGCTA+AGG + Chr7:93976696-93976715 None:intergenic 50.0%
CACTGGACTTCATACCTGAC+AGG + Chr7:93979086-93979105 None:intergenic 50.0%
CGGAAGAAGCCACTGAATGA+GGG + Chr7:93975580-93975599 None:intergenic 50.0%
CGTCCTATCTGTCCTCTTGA+AGG + Chr7:93977989-93978008 None:intergenic 50.0%
CTACCTCTCTTCCTCTTAGC+TGG + Chr7:93975623-93975642 None:intergenic 50.0%
CTCAGCTTGAACCAGCTAAG+AGG - Chr7:93975609-93975628 MsG0780041691.01.T01:three_prime_UTR 50.0%
GAACCAGCTAAGAGGAAGAG+AGG - Chr7:93975617-93975636 MsG0780041691.01.T01:three_prime_UTR 50.0%
GAACTGGACCAGCAGCTTTA+AGG + Chr7:93978352-93978371 None:intergenic 50.0%
GATGGCAACTTACCAGCAGA+GGG + Chr7:93978865-93978884 None:intergenic 50.0%
GCAAGCACCTTGAAACGGAA+GGG + Chr7:93979579-93979598 None:intergenic 50.0%
GGGGACACTCTAGTAACATC+TGG - Chr7:93976919-93976938 MsG0780041691.01.T01:intron 50.0%
GGTAAGTTGCCATCACCAGT+TGG - Chr7:93978871-93978890 MsG0780041691.01.T01:CDS 50.0%
GTCAGAAGCCACGACCTTAA+CGG + Chr7:93979360-93979379 None:intergenic 50.0%
GTTATCAAGAGTGGGTGGAG+TGG + Chr7:93975714-93975733 None:intergenic 50.0%
TAAAGCTGCTGGTCCAGTTC+AGG - Chr7:93978352-93978371 MsG0780041691.01.T01:intron 50.0%
TACCAGCAGTCTTTGTCACG+AGG - Chr7:93979312-93979331 MsG0780041691.01.T01:CDS 50.0%
TAGGTGTGAAAGCAGGAAGG+TGG + Chr7:93978708-93978727 None:intergenic 50.0%
TGATGGCAACTTACCAGCAG+AGG + Chr7:93978866-93978885 None:intergenic 50.0%
TGCACGCATCTGTGTGCTTA+TGG - Chr7:93977839-93977858 MsG0780041691.01.T01:intron 50.0%
TGCTTGGTAGGTGTGAAAGC+AGG + Chr7:93978715-93978734 None:intergenic 50.0%
TGGAAGAGTCGACTGTTTGG+TGG + Chr7:93978921-93978940 None:intergenic 50.0%
TGGTAGGTGTGAAAGCAGGA+AGG + Chr7:93978711-93978730 None:intergenic 50.0%
TGGTCATAGCCTCCATTCTC+GGG + Chr7:93979211-93979230 None:intergenic 50.0%
TTCGCCCTCCGGTTTCATTA+CGG + Chr7:93978262-93978281 None:intergenic 50.0%
! AAACAGTCGACTCTTCCAGC+GGG - Chr7:93978923-93978942 MsG0780041691.01.T01:intron 50.0%
! AAGAAGGACACTAGTGCTGG+TGG - Chr7:93978829-93978848 MsG0780041691.01.T01:intron 50.0%
! ATCATAGGTGGTGGTGTTGG+TGG - Chr7:93978323-93978342 MsG0780041691.01.T01:intron 50.0%
! CAAACAGTCGACTCTTCCAG+CGG - Chr7:93978922-93978941 MsG0780041691.01.T01:intron 50.0%
! CATGCTGGTTATGACCTGTC+AGG - Chr7:93979069-93979088 MsG0780041691.01.T01:intron 50.0%
! CATGTCATTGCTGTTGCTGC+TGG - Chr7:93976032-93976051 MsG0780041691.01.T01:CDS 50.0%
! CTCCTGAAGATGCTGGTTGA+CGG + Chr7:93977336-93977355 None:intergenic 50.0%
! CTTAGCCACCACGGTTGTTT+TGG - Chr7:93976694-93976713 MsG0780041691.01.T01:intron 50.0%
! GCCACCAGCCAAGATGTTTT+AGG - Chr7:93977076-93977095 MsG0780041691.01.T01:intron 50.0%
! TTAGCAGCTAGGGCTTGTTC+AGG + Chr7:93975665-93975684 None:intergenic 50.0%
! TTGGCTGGTGGCGAACTTAA+AGG + Chr7:93977068-93977087 None:intergenic 50.0%
!! ACGGAGAGAGGCATTAGAGA+TGG + Chr7:93977317-93977336 None:intergenic 50.0%
!! ACTGGACCAGCAGCTTTAAG+GGG + Chr7:93978350-93978369 None:intergenic 50.0%
!! GACACTAGTGCTGGTGGAAA+AGG - Chr7:93978835-93978854 MsG0780041691.01.T01:intron 50.0%
!! GCTGGTGTTGTTGTTGTTGG+TGG + Chr7:93975481-93975500 None:intergenic 50.0%
!! GTTGTTGTTGGTGGTTGTGG+TGG + Chr7:93975472-93975491 None:intergenic 50.0%
!! TCATAGGTGGTGGTGTTGGT+GGG - Chr7:93978324-93978343 MsG0780041691.01.T01:intron 50.0%
AAGACCGTTCGTCGGAGATG+CGG + Chr7:93975525-93975544 None:intergenic 55.0%
AATGAAACCGGAGGGCGAAG+TGG - Chr7:93978263-93978282 MsG0780041691.01.T01:intron 55.0%
ACCTCCCAGGTCTACAGAGT+GGG - Chr7:93979026-93979045 MsG0780041691.01.T01:intron 55.0%
ATGTGGGACCCATCCGTGTT+TGG + Chr7:93975551-93975570 None:intergenic 55.0%
CACCTCGTGACAAAGACTGC+TGG + Chr7:93979317-93979336 None:intergenic 55.0%
CCTGGTAAGTACAGTGACGC+GGG - Chr7:93976134-93976153 MsG0780041691.01.T01:intron 55.0%
CGCTGGAAGAGTCGACTGTT+TGG + Chr7:93978924-93978943 None:intergenic 55.0%
CGTCAACCAGCATCTTCAGG+AGG - Chr7:93977334-93977353 MsG0780041691.01.T01:intron 55.0%
CTCCGTCAACCAGCATCTTC+AGG - Chr7:93977331-93977350 MsG0780041691.01.T01:intron 55.0%
GAAGCCACGACCTTAACGGA+TGG + Chr7:93979356-93979375 None:intergenic 55.0%
GATGCAGGCAATGCAGGACA+AGG - Chr7:93975999-93976018 MsG0780041691.01.T01:CDS 55.0%
GCGGAAGAAGCCACTGAATG+AGG + Chr7:93975581-93975600 None:intergenic 55.0%
GCGTCACTGTACTTACCAGG+TGG + Chr7:93976134-93976153 None:intergenic 55.0%
GGAAAAGGTGATCCCTCTGC+TGG - Chr7:93978850-93978869 MsG0780041691.01.T01:intron 55.0%
GGCGAGCCAGCATCAAGTTT+AGG - Chr7:93978892-93978911 MsG0780041691.01.T01:CDS 55.0%
TCTCACCAGTCTCCCGAGAA+TGG - Chr7:93979196-93979215 MsG0780041691.01.T01:CDS 55.0%
! AGATGCTGGTTGACGGAGAG+AGG + Chr7:93977329-93977348 None:intergenic 55.0%
! CATTGCTGTTGCTGCTGGTG+AGG - Chr7:93976037-93976056 MsG0780041691.01.T01:CDS 55.0%
!! GTTGTTGGTGGTTGTGGTGG+TGG + Chr7:93975469-93975488 None:intergenic 55.0%
AAGACCACCACTTCGCCCTC+CGG + Chr7:93978273-93978292 None:intergenic 60.0%
ACCACCGCATCTCCGACGAA+CGG - Chr7:93975518-93975537 MsG0780041691.01.T01:three_prime_UTR 60.0%
ACTCCCCCACTCTGTAGACC+TGG + Chr7:93979034-93979053 None:intergenic 60.0%
AGCCTCCATTCTCGGGAGAC+TGG + Chr7:93979204-93979223 None:intergenic 60.0%
CACCAGTCTCCCGAGAATGG+AGG - Chr7:93979199-93979218 MsG0780041691.01.T01:CDS 60.0%
CACCTCCCAGGTCTACAGAG+TGG - Chr7:93979025-93979044 MsG0780041691.01.T01:intron 60.0%
CCCGCGTCACTGTACTTACC+AGG + Chr7:93976137-93976156 None:intergenic 60.0%
CCTCCCAGGTCTACAGAGTG+GGG - Chr7:93979027-93979046 MsG0780041691.01.T01:intron 60.0%
CTCCCAGGTCTACAGAGTGG+GGG - Chr7:93979028-93979047 MsG0780041691.01.T01:intron 60.0%
CTCCCCCACTCTGTAGACCT+GGG + Chr7:93979033-93979052 None:intergenic 60.0%
CTGCATCTGGTTGCACCACC+TGG - Chr7:93976116-93976135 MsG0780041691.01.T01:intron 60.0%
GTTTGCACGTGACACCTCCC+AGG - Chr7:93979013-93979032 MsG0780041691.01.T01:intron 60.0%
TCCAGCGGGAATCCAATCCG+AGG - Chr7:93978937-93978956 MsG0780041691.01.T01:intron 60.0%
TGCGCCATCCGTTAAGGTCG+TGG - Chr7:93979349-93979368 MsG0780041691.01.T01:CDS 60.0%
TGGGGTGATGCAGGCAATGC+AGG - Chr7:93975993-93976012 MsG0780041691.01.T01:CDS 60.0%
! TCCTCGGATTGGATTCCCGC+TGG + Chr7:93978941-93978960 None:intergenic 60.0%
!! CTTGATGCTGGCTCGCCAAC+TGG + Chr7:93978889-93978908 None:intergenic 60.0%
ACCGTTCGTCGGAGATGCGG+TGG + Chr7:93975522-93975541 None:intergenic 65.0%
CCCCACTCTGTAGACCTGGG+AGG + Chr7:93979030-93979049 None:intergenic 65.0%
GAAACCGGAGGGCGAAGTGG+TGG - Chr7:93978266-93978285 MsG0780041691.01.T01:intron 65.0%
GGTGGGCCCCTTAAAGCTGC+TGG - Chr7:93978341-93978360 MsG0780041691.01.T01:intron 65.0%
GTTCGTCGGAGATGCGGTGG+TGG + Chr7:93975519-93975538 None:intergenic 65.0%
!! GCTGGCTCGCCAACTGGTGA+TGG + Chr7:93978883-93978902 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 93975265 93979660 93975265 ID=MsG0780041691.01;Name=MsG0780041691.01
Chr7 mRNA 93975265 93979660 93975265 ID=MsG0780041691.01.T01;Parent=MsG0780041691.01;Name=MsG0780041691.01.T01;_AED=0.47;_eAED=0.47;_QI=166|0.5|0.8|1|0.5|0.4|5|417|318
Chr7 exon 93975265 93975746 93975265 ID=MsG0780041691.01.T01:exon:20627;Parent=MsG0780041691.01.T01
Chr7 exon 93975814 93976126 93975814 ID=MsG0780041691.01.T01:exon:20626;Parent=MsG0780041691.01.T01
Chr7 exon 93976552 93976704 93976552 ID=MsG0780041691.01.T01:exon:20625;Parent=MsG0780041691.01.T01
Chr7 exon 93978867 93978919 93978867 ID=MsG0780041691.01.T01:exon:20624;Parent=MsG0780041691.01.T01
Chr7 exon 93979122 93979660 93979122 ID=MsG0780041691.01.T01:exon:20623;Parent=MsG0780041691.01.T01
Chr7 five_prime_UTR 93979495 93979660 93979495 ID=MsG0780041691.01.T01:five_prime_utr;Parent=MsG0780041691.01.T01
Chr7 CDS 93979122 93979494 93979122 ID=MsG0780041691.01.T01:cds;Parent=MsG0780041691.01.T01
Chr7 CDS 93978867 93978919 93978867 ID=MsG0780041691.01.T01:cds;Parent=MsG0780041691.01.T01
Chr7 CDS 93976552 93976704 93976552 ID=MsG0780041691.01.T01:cds;Parent=MsG0780041691.01.T01
Chr7 CDS 93975814 93976126 93975814 ID=MsG0780041691.01.T01:cds;Parent=MsG0780041691.01.T01
Chr7 CDS 93975682 93975746 93975682 ID=MsG0780041691.01.T01:cds;Parent=MsG0780041691.01.T01
Chr7 three_prime_UTR 93975265 93975681 93975265 ID=MsG0780041691.01.T01:three_prime_utr;Parent=MsG0780041691.01.T01
Gene Sequence

>MsG0780041691.01.T01

ATGGACTCCAATGACAACCAATTAAGCTCTTTCTTCCACCACCACAACCACCAACAACAACAACACCAGCAACAGCAACAAAACTCCACCACCGCATCTCCGACGAACGGTCTTTTACCAAACACGGATGGGTCCCACATACTTTACCCTCATTCAGTGGCTTCTTCCGCTGTTTCTTCTCAGCTTGAACCAGCTAAGAGGAAGAGAGGTAGACCTAGAAAATATGGTACTCCTGAACAAGCCCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCTCCCACTCCACCCACTCTTGATAACAACAAGAATACTCACTCTTTCTCTCCTCCTCCTTCTTTCACCTCTAAGAAATCTCATTCTCTCTTTCTAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGGTCGGTTTGATATTATTTCGCTTACTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTATCGGTACATTTTTTATGGACAACAAGAAGGACACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAGTTTAGGTTTCCACCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAACTTGGTTTGCACGTGACACCTCCCAGGTCTACAGAGTGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGTATGAAGTCCAGTGATTTTGGAAGAACAGGTCATGGGTCTCACCAGTCTCCCGAGAATGGAGGCTATGACCAAATTCCTGATTGA

Protein sequence

>MsG0780041691.01.T01

MDSNDNQLSSFFHHHNHQQQQHQQQQQNSTTASPTNGLLPNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTPPTLDNNKNTHSFSPPPSFTSKKSHSLFLGNAGQGFSAHVIAVAAGEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIIGTFFMDNKKDTSAGGKGDPSAGKLPSPVGEPASSLGFHQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRSTEWGSHPDSRHAGYDLSGMKSSDFGRTGHGSHQSPENGGYDQIPD*