Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034655.01.T01 | XP_003619856.1 | 91.02 | 245 | 3 | 3 | 1 | 243 | 3 | 230 | 1.27E-157 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034655.01.T01 | Q9LE73 | 53.403 | 191 | 67 | 4 | 51 | 237 | 23 | 195 | 1.94E-64 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034655.01.T01 | G7KQ94 | 91.020 | 245 | 3 | 3 | 1 | 243 | 3 | 230 | 6.05e-158 | 446 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047912.01 | MsG0680034655.01 | 0.818120 | 2.313688e-52 | 1.716759e-49 |
| MsG0180000157.01 | MsG0680034655.01 | 0.839557 | 1.475573e-57 | 2.044999e-54 |
| MsG0180000271.01 | MsG0680034655.01 | 0.841703 | 4.046703e-58 | 5.994626e-55 |
| MsG0180000363.01 | MsG0680034655.01 | 0.820088 | 8.251129e-53 | 6.466310e-50 |
| MsG0180000526.01 | MsG0680034655.01 | 0.802439 | 5.606164e-49 | 2.746312e-46 |
| MsG0180000550.01 | MsG0680034655.01 | 0.822218 | 2.665024e-53 | 2.216549e-50 |
| MsG0180000604.01 | MsG0680034655.01 | 0.830401 | 2.998265e-55 | 3.155502e-52 |
| MsG0180000611.01 | MsG0680034655.01 | 0.814712 | 1.339518e-51 | 9.054897e-49 |
| MsG0180000669.01 | MsG0680034655.01 | 0.826584 | 2.503688e-54 | 2.357625e-51 |
| MsG0180000673.01 | MsG0680034655.01 | 0.803520 | 3.352289e-49 | 1.688216e-46 |
| MsG0180000680.01 | MsG0680034655.01 | 0.811510 | 6.754372e-51 | 4.189071e-48 |
| MsG0180000821.01 | MsG0680034655.01 | 0.808956 | 2.399983e-50 | 1.391035e-47 |
| MsG0180000855.01 | MsG0680034655.01 | 0.811773 | 5.920327e-51 | 3.697227e-48 |
| MsG0180001009.01 | MsG0680034655.01 | 0.828166 | 1.045589e-54 | 1.031090e-51 |
| MsG0180001030.01 | MsG0680034655.01 | 0.808951 | 2.405803e-50 | 1.394201e-47 |
| MsG0180001043.01 | MsG0680034655.01 | 0.802114 | 6.540203e-49 | 3.177342e-46 |
| MsG0180001663.01 | MsG0680034655.01 | 0.819029 | 1.439319e-52 | 1.095202e-49 |
| MsG0180001712.01 | MsG0680034655.01 | 0.859707 | 3.432198e-63 | 9.148126e-60 |
| MsG0180002075.01 | MsG0680034655.01 | 0.807607 | 4.653151e-50 | 2.603068e-47 |
| MsG0180002750.01 | MsG0680034655.01 | -0.826010 | 3.430108e-54 | 3.177937e-51 |
| MsG0180002894.01 | MsG0680034655.01 | 0.810115 | 1.352911e-50 | 8.086667e-48 |
| MsG0180003822.01 | MsG0680034655.01 | 0.823143 | 1.622997e-53 | 1.385970e-50 |
| MsG0180004005.01 | MsG0680034655.01 | 0.800909 | 1.155274e-48 | 5.444172e-46 |
| MsG0180004085.01 | MsG0680034655.01 | 0.802584 | 5.234725e-49 | 2.573746e-46 |
| MsG0180004385.01 | MsG0680034655.01 | 0.811833 | 5.743638e-51 | 3.592638e-48 |
| MsG0180004388.01 | MsG0680034655.01 | 0.807161 | 5.787552e-50 | 3.200348e-47 |
| MsG0180004486.01 | MsG0680034655.01 | 0.819580 | 1.077771e-52 | 8.327028e-50 |
| MsG0180004602.01 | MsG0680034655.01 | 0.817400 | 3.363761e-52 | 2.447131e-49 |
| MsG0180004603.01 | MsG0680034655.01 | 0.801796 | 7.605095e-49 | 3.664924e-46 |
| MsG0180004765.01 | MsG0680034655.01 | 0.807735 | 4.372541e-50 | 2.454332e-47 |
| MsG0180004824.01 | MsG0680034655.01 | 0.823029 | 1.726046e-53 | 1.469178e-50 |
| MsG0180004843.01 | MsG0680034655.01 | 0.812249 | 4.662222e-51 | 2.949372e-48 |
| MsG0180005233.01 | MsG0680034655.01 | 0.817768 | 2.778552e-52 | 2.041919e-49 |
| MsG0180005268.01 | MsG0680034655.01 | 0.816211 | 6.215136e-52 | 4.376879e-49 |
| MsG0180005306.01 | MsG0680034655.01 | 0.816729 | 4.759715e-52 | 3.399495e-49 |
| MsG0180005354.01 | MsG0680034655.01 | 0.809056 | 2.284543e-50 | 1.327701e-47 |
| MsG0180005505.01 | MsG0680034655.01 | 0.809363 | 1.963463e-50 | 1.150552e-47 |
| MsG0180005872.01 | MsG0680034655.01 | 0.824053 | 9.942981e-54 | 8.710464e-51 |
| MsG0180005960.01 | MsG0680034655.01 | 0.806099 | 9.695857e-50 | 5.217291e-47 |
| MsG0180006016.01 | MsG0680034655.01 | 0.806042 | 9.965799e-50 | 5.354891e-47 |
| MsG0180006138.01 | MsG0680034655.01 | 0.810942 | 8.968074e-51 | 5.479524e-48 |
| MsG0280006302.01 | MsG0680034655.01 | -0.828845 | 7.168563e-55 | 7.209290e-52 |
| MsG0280010551.01 | MsG0680034655.01 | 0.800593 | 1.340248e-48 | 6.265069e-46 |
| MsG0280010722.01 | MsG0680034655.01 | 0.807379 | 5.203226e-50 | 2.893676e-47 |
| MsG0280011043.01 | MsG0680034655.01 | 0.824929 | 6.183232e-54 | 5.555142e-51 |
| MsG0280011141.01 | MsG0680034655.01 | 0.811238 | 7.738325e-51 | 4.764762e-48 |
| MsG0280011175.01 | MsG0680034655.01 | 0.807066 | 6.059564e-50 | 3.342555e-47 |
| MsG0280011201.01 | MsG0680034655.01 | 0.823639 | 1.243220e-53 | 1.076596e-50 |
| MsG0280011235.01 | MsG0680034655.01 | 0.806380 | 8.461132e-50 | 4.585591e-47 |
| MsG0280011330.01 | MsG0680034655.01 | 0.804026 | 2.631844e-49 | 1.342742e-46 |
| MsG0280011376.01 | MsG0680034655.01 | 0.823773 | 1.156229e-53 | 1.005164e-50 |
| MsG0380011754.01 | MsG0680034655.01 | 0.816252 | 6.087523e-52 | 4.291709e-49 |
| MsG0380011895.01 | MsG0680034655.01 | 0.809454 | 1.877040e-50 | 1.102516e-47 |
| MsG0380012020.01 | MsG0680034655.01 | 0.803289 | 3.742781e-49 | 1.873583e-46 |
| MsG0380012160.01 | MsG0680034655.01 | 0.816220 | 6.187086e-52 | 4.358142e-49 |
| MsG0380012187.01 | MsG0680034655.01 | 0.803365 | 3.609774e-49 | 1.810512e-46 |
| MsG0380014880.01 | MsG0680034655.01 | 0.801695 | 7.976228e-49 | 3.833750e-46 |
| MsG0680031114.01 | MsG0680034655.01 | 0.801853 | 7.399850e-49 | 3.571320e-46 |
| MsG0680031459.01 | MsG0680034655.01 | 0.836727 | 7.899427e-57 | 1.004183e-53 |
| MsG0680031538.01 | MsG0680034655.01 | 0.812872 | 3.406263e-51 | 2.190547e-48 |
| MsG0680032476.01 | MsG0680034655.01 | 0.812719 | 3.680892e-51 | 2.357768e-48 |
| MsG0680034451.01 | MsG0680034655.01 | 0.806333 | 8.654671e-50 | 4.684961e-47 |
| MsG0680034476.01 | MsG0680034655.01 | 0.811954 | 5.405746e-51 | 3.392308e-48 |
| MsG0680034655.01 | MsG0680035580.01 | 0.806697 | 7.251650e-50 | 3.962142e-47 |
| MsG0680034655.01 | MsG0680035582.01 | 0.835220 | 1.904594e-56 | 2.314031e-53 |
| MsG0680034655.01 | MsG0680035844.01 | 0.839064 | 1.981059e-57 | 2.704510e-54 |
| MsG0680034655.01 | MsG0780036630.01 | 0.807889 | 4.054153e-50 | 2.284692e-47 |
| MsG0680034655.01 | MsG0780036789.01 | 0.808044 | 3.757028e-50 | 2.125967e-47 |
| MsG0680034655.01 | MsG0780036950.01 | 0.803811 | 2.916887e-49 | 1.479930e-46 |
| MsG0680034655.01 | MsG0780038495.01 | 0.819801 | 9.598282e-53 | 7.461702e-50 |
| MsG0680034655.01 | MsG0780038644.01 | 0.819752 | 9.849553e-53 | 7.646250e-50 |
| MsG0680034655.01 | MsG0780038833.01 | 0.806961 | 6.379941e-50 | 3.509703e-47 |
| MsG0680034655.01 | MsG0780038907.01 | 0.808317 | 3.286595e-50 | 1.873313e-47 |
| MsG0680034655.01 | MsG0780039405.01 | 0.825810 | 3.826162e-54 | 3.524839e-51 |
| MsG0680034655.01 | MsG0780039777.01 | 0.807359 | 5.254549e-50 | 2.920627e-47 |
| MsG0680034655.01 | MsG0780039828.01 | 0.818239 | 2.174524e-52 | 1.618680e-49 |
| MsG0680034655.01 | MsG0780039832.01 | 0.816133 | 6.469956e-52 | 4.546417e-49 |
| MsG0680034655.01 | MsG0780040389.01 | 0.815196 | 1.046319e-51 | 7.165680e-49 |
| MsG0680034655.01 | MsG0780040712.01 | 0.825204 | 5.325515e-54 | 4.822028e-51 |
| MsG0680034655.01 | MsG0780040726.01 | 0.802035 | 6.790992e-49 | 3.292561e-46 |
| MsG0680034655.01 | MsG0780040757.01 | 0.821929 | 3.108504e-53 | 2.564293e-50 |
| MsG0680034655.01 | MsG0780040758.01 | 0.803080 | 4.134414e-49 | 2.058518e-46 |
| MsG0680034655.01 | MsG0780040788.01 | 0.802750 | 4.836516e-49 | 2.388186e-46 |
| MsG0680034655.01 | MsG0780041192.01 | 0.824294 | 8.724097e-54 | 7.695108e-51 |
| MsG0680034655.01 | MsG0780041210.01 | 0.800488 | 1.407685e-48 | 6.562862e-46 |
| MsG0680034655.01 | MsG0780041300.01 | 0.820658 | 6.104766e-53 | 4.859602e-50 |
| MsG0680034655.01 | MsG0780041351.01 | 0.806175 | 9.347142e-50 | 5.039542e-47 |
| MsG0680034655.01 | MsG0780041390.01 | 0.832645 | 8.401081e-56 | 9.448106e-53 |
| MsG0680034655.01 | MsG0780041432.01 | 0.807476 | 4.960811e-50 | 2.765885e-47 |
| MsG0680034655.01 | MsG0780041507.01 | 0.817891 | 2.605877e-52 | 1.921422e-49 |
| MsG0680034655.01 | MsG0880042053.01 | 0.806602 | 7.597496e-50 | 4.140921e-47 |
| MsG0680034655.01 | MsG0880042107.01 | 0.835742 | 1.405933e-56 | 1.735015e-53 |
| MsG0680034655.01 | MsG0880042543.01 | 0.812139 | 4.926049e-51 | 3.106976e-48 |
| MsG0680034655.01 | MsG0880042698.01 | 0.812496 | 4.117938e-51 | 2.622306e-48 |
| MsG0680034655.01 | MsG0880042972.01 | 0.828613 | 8.155941e-55 | 8.148084e-52 |
| MsG0680034655.01 | MsG0880044062.01 | -0.809508 | 1.827458e-50 | 1.074944e-47 |
| MsG0680034655.01 | MsG0880044409.01 | 0.825503 | 4.523017e-54 | 4.130188e-51 |
| MsG0680034655.01 | MsG0880045756.01 | 0.854515 | 1.169591e-61 | 2.618783e-58 |
| MsG0680034655.01 | MsG0880045869.01 | 0.816981 | 4.178603e-52 | 3.005411e-49 |
| MsG0680034655.01 | MsG0880046058.01 | 0.805092 | 1.577003e-49 | 8.269376e-47 |
| MsG0680034655.01 | MsG0880046091.01 | 0.836809 | 7.529447e-57 | 9.595205e-54 |
| MsG0680034655.01 | MsG0880046122.01 | 0.807502 | 4.898826e-50 | 2.733174e-47 |
| MsG0680034655.01 | MsG0880046244.01 | 0.850821 | 1.325073e-60 | 2.628646e-57 |
| MsG0680034655.01 | MsG0880046731.01 | 0.814467 | 1.518413e-51 | 1.019674e-48 |
| MsG0680034655.01 | MsG0880046921.01 | 0.818085 | 2.356356e-52 | 1.746610e-49 |
| MsG0680034655.01 | MsG0880046967.01 | 0.803489 | 3.401360e-49 | 1.711556e-46 |
| MsG0680034655.01 | MsG0880047143.01 | 0.831172 | 1.940676e-55 | 2.089368e-52 |
| MsG0680034655.01 | MsG0880047294.01 | 0.811274 | 7.598413e-51 | 4.682978e-48 |
| MsG0480018606.01 | MsG0680034655.01 | 0.837190 | 6.016030e-57 | 7.755235e-54 |
| MsG0480018635.01 | MsG0680034655.01 | 0.817582 | 3.060857e-52 | 2.237842e-49 |
| MsG0480018640.01 | MsG0680034655.01 | 0.815307 | 9.886296e-52 | 6.791485e-49 |
| MsG0480019785.01 | MsG0680034655.01 | 0.807444 | 5.040376e-50 | 2.807800e-47 |
| MsG0480019970.01 | MsG0680034655.01 | 0.814055 | 1.871912e-51 | 1.243033e-48 |
| MsG0480020331.01 | MsG0680034655.01 | 0.809502 | 1.833156e-50 | 1.078125e-47 |
| MsG0480020540.01 | MsG0680034655.01 | 0.813156 | 2.952216e-51 | 1.913013e-48 |
| MsG0480020719.01 | MsG0680034655.01 | 0.807529 | 4.835867e-50 | 2.699881e-47 |
| MsG0480020720.01 | MsG0680034655.01 | 0.833550 | 5.000145e-56 | 5.777751e-53 |
| MsG0480021061.01 | MsG0680034655.01 | 0.830822 | 2.364551e-55 | 2.519643e-52 |
| MsG0480021240.01 | MsG0680034655.01 | 0.812589 | 3.929186e-51 | 2.508225e-48 |
| MsG0480022246.01 | MsG0680034655.01 | 0.802423 | 5.650032e-49 | 2.766745e-46 |
| MsG0480022451.01 | MsG0680034655.01 | 0.825237 | 5.230962e-54 | 4.740797e-51 |
| MsG0480022575.01 | MsG0680034655.01 | 0.803026 | 4.243295e-49 | 2.109820e-46 |
| MsG0480023099.01 | MsG0680034655.01 | 0.842135 | 3.110343e-58 | 4.671186e-55 |
| MsG0480023270.01 | MsG0680034655.01 | 0.815886 | 7.347853e-52 | 5.128227e-49 |
| MsG0480023377.01 | MsG0680034655.01 | 0.827117 | 1.867654e-54 | 1.786159e-51 |
| MsG0480023554.01 | MsG0680034655.01 | 0.813939 | 1.985366e-51 | 1.314194e-48 |
| MsG0480023776.01 | MsG0680034655.01 | 0.855991 | 4.348585e-62 | 1.022604e-58 |
| MsG0480023873.01 | MsG0680034655.01 | 0.813792 | 2.139510e-51 | 1.410646e-48 |
| MsG0580024073.01 | MsG0680034655.01 | 0.822827 | 1.923346e-53 | 1.627840e-50 |
| MsG0580024114.01 | MsG0680034655.01 | 0.823760 | 1.164205e-53 | 1.011713e-50 |
| MsG0580024596.01 | MsG0680034655.01 | 0.810445 | 1.148397e-50 | 6.923617e-48 |
| MsG0580025769.01 | MsG0680034655.01 | 0.810169 | 1.317512e-50 | 7.885778e-48 |
| MsG0580025799.01 | MsG0680034655.01 | 0.806743 | 7.094134e-50 | 3.880638e-47 |
| MsG0580025986.01 | MsG0680034655.01 | 0.806585 | 7.658192e-50 | 4.172223e-47 |
| MsG0580026023.01 | MsG0680034655.01 | 0.812081 | 5.072054e-51 | 3.193959e-48 |
| MsG0580026067.01 | MsG0680034655.01 | 0.803624 | 3.189433e-49 | 1.610447e-46 |
| MsG0380015149.01 | MsG0680034655.01 | 0.809288 | 2.037212e-50 | 1.191376e-47 |
| MsG0380015497.01 | MsG0680034655.01 | 0.805028 | 1.627006e-49 | 8.517269e-47 |
| MsG0380015893.01 | MsG0680034655.01 | 0.836064 | 1.164690e-56 | 1.451349e-53 |
| MsG0380015934.01 | MsG0680034655.01 | 0.807915 | 4.002477e-50 | 2.257080e-47 |
| MsG0380016118.01 | MsG0680034655.01 | -0.843494 | 1.354103e-58 | 2.122281e-55 |
| MsG0380016407.01 | MsG0680034655.01 | 0.805362 | 1.384576e-49 | 7.310924e-47 |
| MsG0380016624.01 | MsG0680034655.01 | 0.803267 | 3.781426e-49 | 1.891921e-46 |
| MsG0380016740.01 | MsG0680034655.01 | 0.806148 | 9.467759e-50 | 5.100985e-47 |
| MsG0380016752.01 | MsG0680034655.01 | 0.800748 | 1.246231e-48 | 5.848434e-46 |
| MsG0380016859.01 | MsG0680034655.01 | 0.835956 | 1.240779e-56 | 1.540955e-53 |
| MsG0380016905.01 | MsG0680034655.01 | 0.850874 | 1.280395e-60 | 2.544098e-57 |
| MsG0380017040.01 | MsG0680034655.01 | 0.836492 | 9.063517e-57 | 1.144012e-53 |
| MsG0380017286.01 | MsG0680034655.01 | 0.843163 | 1.658642e-58 | 2.572440e-55 |
| MsG0380017322.01 | MsG0680034655.01 | 0.807303 | 5.398739e-50 | 2.996573e-47 |
| MsG0380017607.01 | MsG0680034655.01 | 0.818446 | 1.951593e-52 | 1.461357e-49 |
| MsG0380017631.01 | MsG0680034655.01 | 0.806185 | 9.301593e-50 | 5.016305e-47 |
| MsG0380017888.01 | MsG0680034655.01 | 0.834706 | 2.566133e-56 | 3.069353e-53 |
| MsG0380017941.01 | MsG0680034655.01 | 0.832832 | 7.546505e-56 | 8.534363e-53 |
| MsG0480018292.01 | MsG0680034655.01 | 0.805496 | 1.298260e-49 | 6.878523e-47 |
| MsG0580027034.01 | MsG0680034655.01 | 0.817617 | 3.005452e-52 | 2.199411e-49 |
| MsG0580027401.01 | MsG0680034655.01 | 0.809814 | 1.571350e-50 | 9.318364e-48 |
| MsG0580028988.01 | MsG0680034655.01 | 0.824613 | 7.340856e-54 | 6.536040e-51 |
| MsG0580029189.01 | MsG0680034655.01 | 0.800438 | 1.441180e-48 | 6.710661e-46 |
| MsG0580029432.01 | MsG0680034655.01 | 0.804017 | 2.642712e-49 | 1.347981e-46 |
| MsG0580029444.01 | MsG0680034655.01 | 0.809842 | 1.549702e-50 | 9.196821e-48 |
| MsG0580029594.01 | MsG0680034655.01 | 0.833163 | 6.243974e-56 | 7.131966e-53 |
| MsG0580029762.01 | MsG0680034655.01 | 0.808939 | 2.420321e-50 | 1.402142e-47 |
| MsG0580029794.01 | MsG0680034655.01 | 0.832876 | 7.358574e-56 | 8.332893e-53 |
| MsG0580029999.01 | MsG0680034655.01 | -0.814889 | 1.224252e-51 | 8.314669e-49 |
| MsG0580030204.01 | MsG0680034655.01 | 0.843587 | 1.278634e-58 | 2.010069e-55 |
| MsG0680030303.01 | MsG0680034655.01 | 0.821956 | 3.063893e-53 | 2.529330e-50 |
| MsG0280006708.01 | MsG0680034655.01 | 0.810744 | 9.897696e-51 | 6.015353e-48 |
| MsG0280007547.01 | MsG0680034655.01 | 0.853708 | 1.998574e-61 | 4.357428e-58 |
| MsG0280007691.01 | MsG0680034655.01 | 0.813199 | 2.889018e-51 | 1.874291e-48 |
| MsG0280007714.01 | MsG0680034655.01 | 0.813493 | 2.489274e-51 | 1.628121e-48 |
| MsG0280008004.01 | MsG0680034655.01 | 0.804600 | 1.998216e-49 | 1.034592e-46 |
| MsG0280008295.01 | MsG0680034655.01 | 0.815026 | 1.141145e-51 | 7.779692e-49 |
| MsG0280008515.01 | MsG0680034655.01 | 0.807404 | 5.139623e-50 | 2.860192e-47 |
| MsG0280009235.01 | MsG0680034655.01 | 0.805545 | 1.267729e-49 | 6.725238e-47 |
| MsG0280010170.01 | MsG0680034655.01 | 0.832274 | 1.037752e-55 | 1.154142e-52 |
| MsG0280010378.01 | MsG0680034655.01 | 0.810875 | 9.271530e-51 | 5.654717e-48 |
| MsG0280010389.01 | MsG0680034655.01 | 0.808380 | 3.186694e-50 | 1.819373e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034655.01.T01 | MTR_6g070920 | 91.020 | 245 | 3 | 3 | 1 | 243 | 3 | 230 | 1.53e-161 | 446 |
| MsG0680034655.01.T01 | MTR_6g070920 | 88.688 | 221 | 6 | 3 | 1 | 219 | 3 | 206 | 8.13e-140 | 391 |
| MsG0680034655.01.T01 | MTR_6g070920 | 85.876 | 177 | 6 | 3 | 1 | 175 | 3 | 162 | 9.11e-103 | 295 |
| MsG0680034655.01.T01 | MTR_3g065330 | 56.497 | 177 | 55 | 4 | 66 | 238 | 8 | 166 | 2.46e-62 | 194 |
| MsG0680034655.01.T01 | MTR_1g032290 | 53.977 | 176 | 60 | 4 | 68 | 240 | 1 | 158 | 1.22e-58 | 183 |
| MsG0680034655.01.T01 | MTR_8g105140 | 53.371 | 178 | 62 | 4 | 68 | 242 | 1 | 160 | 5.52e-58 | 182 |
| MsG0680034655.01.T01 | MTR_3g065330 | 56.494 | 154 | 45 | 4 | 66 | 215 | 30 | 165 | 2.32e-51 | 165 |
| MsG0680034655.01.T01 | MTR_5g078020 | 50.847 | 177 | 63 | 4 | 66 | 238 | 8 | 164 | 2.49e-51 | 166 |
| MsG0680034655.01.T01 | MTR_8g039690 | 43.678 | 174 | 72 | 3 | 69 | 233 | 1 | 157 | 2.51e-39 | 134 |
| MsG0680034655.01.T01 | MTR_7g084380 | 42.778 | 180 | 74 | 4 | 69 | 236 | 1 | 163 | 2.10e-37 | 131 |
| MsG0680034655.01.T01 | MTR_7g084380 | 45.333 | 150 | 64 | 4 | 105 | 236 | 10 | 159 | 1.25e-33 | 121 |
| MsG0680034655.01.T01 | MTR_1g078390 | 40.260 | 77 | 26 | 2 | 75 | 148 | 7 | 66 | 4.40e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034655.01.T01 | AT1G18300 | 53.403 | 191 | 67 | 4 | 51 | 237 | 23 | 195 | 1.98e-65 | 202 |
| MsG0680034655.01.T01 | AT1G73540 | 55.556 | 180 | 58 | 5 | 62 | 239 | 35 | 194 | 4.63e-59 | 186 |
| MsG0680034655.01.T01 | AT1G14860 | 54.335 | 173 | 59 | 3 | 68 | 238 | 1 | 155 | 8.20e-58 | 182 |
| MsG0680034655.01.T01 | AT2G01670 | 50.829 | 181 | 69 | 3 | 65 | 243 | 3 | 165 | 3.74e-56 | 177 |
| MsG0680034655.01.T01 | AT1G12880 | 42.623 | 183 | 73 | 4 | 69 | 236 | 1 | 166 | 2.01e-37 | 130 |
| MsG0680034655.01.T01 | AT3G26690 | 40.761 | 184 | 76 | 4 | 69 | 236 | 1 | 167 | 2.37e-34 | 122 |
| MsG0680034655.01.T01 | AT3G26690 | 40.761 | 184 | 76 | 4 | 69 | 236 | 1 | 167 | 2.37e-34 | 122 |
| MsG0680034655.01.T01 | AT3G12600 | 44.633 | 177 | 70 | 4 | 69 | 234 | 1 | 160 | 4.72e-32 | 116 |
| MsG0680034655.01.T01 | AT3G12600 | 44.242 | 165 | 64 | 4 | 81 | 234 | 4 | 151 | 5.36e-28 | 105 |
Find 53 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCTTATGTTCATTTC+TGG | 0.092026 | 6:+92216309 | None:intergenic |
| TGTTATCTTGCAGAGTAATT+TGG | 0.194874 | 6:-92216421 | MsG0680034655.01.T01:intron |
| TAGGCATTCTCCCTTGCTTT+TGG | 0.224935 | 6:-92215850 | MsG0680034655.01.T01:three_prime_UTR |
| TGCAGAGTAATTTGGGTAAA+TGG | 0.231855 | 6:-92216413 | MsG0680034655.01.T01:intron |
| TGAACATAAGAAGAAGAAAA+TGG | 0.253808 | 6:-92216302 | MsG0680034655.01.T01:CDS |
| ATAGAAGAAGCTGGTGTTAT+TGG | 0.256499 | 6:-92216552 | MsG0680034655.01.T01:CDS |
| GTAATCAAAAGTCAAGAATT+TGG | 0.261842 | 6:-92215773 | MsG0680034655.01.T01:three_prime_UTR |
| AATAACACCAGCTTCTTCTA+TGG | 0.287922 | 6:+92216554 | None:intergenic |
| AAGAAATATGCCCATATGTT+TGG | 0.313470 | 6:-92215944 | MsG0680034655.01.T01:CDS |
| TTAGCAAGGAGTTGGATAAT+TGG | 0.322855 | 6:-92216332 | MsG0680034655.01.T01:CDS |
| AGAAGCACTCAAAAGATATT+AGG | 0.325489 | 6:-92215807 | MsG0680034655.01.T01:three_prime_UTR |
| GTTATCTTGCAGAGTAATTT+GGG | 0.328126 | 6:-92216420 | MsG0680034655.01.T01:intron |
| GAAGGAAGCTTTAGATGAAT+TGG | 0.336584 | 6:-92215919 | MsG0680034655.01.T01:CDS |
| ACCTAAAACTTAGATTGAAT+TGG | 0.341917 | 6:+92215884 | None:intergenic |
| TGCAAATGTCTACCAGTTCT+AGG | 0.360990 | 6:+92217343 | None:intergenic |
| TCTACGGTGGATCACTTCTA+AGG | 0.373192 | 6:+92215643 | None:intergenic |
| GCTTCCTTCATCCAAACATA+TGG | 0.390025 | 6:+92215933 | None:intergenic |
| AACCAACAAAAGAATTGTAA+TGG | 0.417912 | 6:-92217482 | MsG0680034655.01.T01:CDS |
| TGTTTGGTTTCTCCTAGAAC+TGG | 0.445974 | 6:-92217355 | MsG0680034655.01.T01:CDS |
| CATATATCCTTCATGCATAG+TGG | 0.447247 | 6:+92216368 | None:intergenic |
| ATTGGAGAATATGATGTGTT+TGG | 0.449206 | 6:-92217371 | MsG0680034655.01.T01:CDS |
| ACCAACAAAAGAATTGTAAT+GGG | 0.449371 | 6:-92217481 | MsG0680034655.01.T01:CDS |
| GAACATAAGAAGAAGAAAAT+GGG | 0.454169 | 6:-92216301 | MsG0680034655.01.T01:intron |
| AAAGAATGGAACCCAAGAAA+AGG | 0.465082 | 6:-92216682 | MsG0680034655.01.T01:CDS |
| GCAGTTCCCAAAAGGAGGTT+GGG | 0.467765 | 6:-92216616 | MsG0680034655.01.T01:CDS |
| GTTCCCTTTGCTTGTTAGCA+AGG | 0.472162 | 6:-92216346 | MsG0680034655.01.T01:CDS |
| TTTGCTTGTTAGCAAGGAGT+TGG | 0.481309 | 6:-92216340 | MsG0680034655.01.T01:CDS |
| TCTCAAAGCAGCTTGTTCCA+TGG | 0.496073 | 6:+92216581 | None:intergenic |
| GAATTGACTTTGTACATCTA+CGG | 0.497466 | 6:+92215627 | None:intergenic |
| ATCATATTCTCCAATTGTTG+AGG | 0.499473 | 6:+92217379 | None:intergenic |
| TCATATTCTCCAATTGTTGA+GGG | 0.508447 | 6:+92217380 | None:intergenic |
| TGCAGTTCCCAAAAGGAGGT+TGG | 0.514238 | 6:-92216617 | MsG0680034655.01.T01:CDS |
| AACTCCTTGCTAACAAGCAA+AGG | 0.516565 | 6:+92216342 | None:intergenic |
| AACCCAAGAAAAGGAAATAG+AGG | 0.529093 | 6:-92216673 | MsG0680034655.01.T01:CDS |
| ATAAGTGCTCAAAAGGGTAG+TGG | 0.532381 | 6:-92216642 | MsG0680034655.01.T01:CDS |
| ACAAGGATGTCGTCAAGTTG+TGG | 0.541451 | 6:-92217311 | MsG0680034655.01.T01:CDS |
| ATGCCCATATGTTTGGATGA+AGG | 0.542964 | 6:-92215937 | MsG0680034655.01.T01:CDS |
| CTTCCTTCATCCAAACATAT+GGG | 0.543785 | 6:+92215934 | None:intergenic |
| CAAGGATGTCGTCAAGTTGT+GGG | 0.550727 | 6:-92217310 | MsG0680034655.01.T01:CDS |
| ACTCCTTGCTAACAAGCAAA+GGG | 0.551729 | 6:+92216343 | None:intergenic |
| AGTGGAATGCAGTTCCCAAA+AGG | 0.554269 | 6:-92216624 | MsG0680034655.01.T01:CDS |
| CTTTGTAGATTCCAAAAGCA+AGG | 0.558395 | 6:+92215839 | None:intergenic |
| ATCCTTCATGCATAGTGGGT+TGG | 0.568319 | 6:+92216373 | None:intergenic |
| GAATTCTTAGAGTGTAGTTG+AGG | 0.568797 | 6:-92215671 | MsG0680034655.01.T01:three_prime_UTR |
| AGAGAAACCATAGAAGAAGC+TGG | 0.570545 | 6:-92216561 | MsG0680034655.01.T01:CDS |
| CATTTGCAACGTTATGAACA+AGG | 0.571762 | 6:-92217328 | MsG0680034655.01.T01:CDS |
| CGCCAACCCACTATGCATGA+AGG | 0.576057 | 6:-92216375 | MsG0680034655.01.T01:CDS |
| ATATATCCTTCATGCATAGT+GGG | 0.580319 | 6:+92216369 | None:intergenic |
| TTTGTAGATTCCAAAAGCAA+GGG | 0.611060 | 6:+92215840 | None:intergenic |
| TTGACTTTGTACATCTACGG+TGG | 0.634012 | 6:+92215630 | None:intergenic |
| GGAATGCAGTTCCCAAAAGG+AGG | 0.638208 | 6:-92216621 | MsG0680034655.01.T01:CDS |
| AAGGATGTCGTCAAGTTGTG+GGG | 0.655005 | 6:-92217309 | MsG0680034655.01.T01:CDS |
| TGTAATCATGCAGTTGACTG+TGG | 0.660929 | 6:-92215976 | MsG0680034655.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTAAAAATGAAATTTTTA+AGG | - | Chr6:92215917-92215936 | MsG0680034655.01.T01:CDS | 10.0% |
| !! | ATAATTCAACAATGAATAAA+AGG | + | Chr6:92216224-92216243 | None:intergenic | 15.0% |
| !! | TAATTCAACAATGAATAAAA+GGG | + | Chr6:92216223-92216242 | None:intergenic | 15.0% |
| !! | TTTATTCATTGTTGAATTAT+TGG | - | Chr6:92216224-92216243 | MsG0680034655.01.T01:intron | 15.0% |
| !!! | AAAATTTTGAATTGAATATG+AGG | - | Chr6:92215962-92215981 | MsG0680034655.01.T01:CDS | 15.0% |
| !!! | AAATTTTGAATTGAATATGA+GGG | - | Chr6:92215963-92215982 | MsG0680034655.01.T01:CDS | 15.0% |
| !!! | AACAATTTTTGAAATTTTGA+AGG | - | Chr6:92216155-92216174 | MsG0680034655.01.T01:intron | 15.0% |
| !!! | ATTTTAAGGTTTTTTTCAAT+TGG | - | Chr6:92216087-92216106 | MsG0680034655.01.T01:intron | 15.0% |
| !!! | GACAATTTATGAAATTTTTA+AGG | - | Chr6:92215876-92215895 | MsG0680034655.01.T01:exon | 15.0% |
| !!! | GACAATTTTTGATAATTTTA+AGG | - | Chr6:92215985-92216004 | MsG0680034655.01.T01:intron | 15.0% |
| !!! | TTTTAAAGTTTTGATTTTGA+AGG | - | Chr6:92216113-92216132 | MsG0680034655.01.T01:intron | 15.0% |
| !!! | TTTTAAGGTTTTTTTCAATT+GGG | - | Chr6:92216088-92216107 | MsG0680034655.01.T01:intron | 15.0% |
| !! | TCTTAATTAAGTAGCATTAT+TGG | - | Chr6:92217028-92217047 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | AAATTTGGATTTTTAGTGTT+TGG | - | Chr6:92216036-92216055 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | AGGTTTTTTTTTTTCTCAAT+TGG | - | Chr6:92216005-92216024 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | ATATTGTGATTTGTTCTTAT+GGG | - | Chr6:92215809-92215828 | MsG0680034655.01.T01:three_prime_UTR | 20.0% |
| !!! | ATTTTTCATGATACAACAAT+TGG | - | Chr6:92216598-92216617 | MsG0680034655.01.T01:CDS | 20.0% |
| !!! | GGTATACTTTAAAATCATTT+AGG | + | Chr6:92216202-92216221 | None:intergenic | 20.0% |
| !!! | GGTTTTTTTTTTTCTCAATT+GGG | - | Chr6:92216006-92216025 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | TAATCTAACTTTGTTTTGTA+TGG | - | Chr6:92216329-92216348 | MsG0680034655.01.T01:CDS | 20.0% |
| !!! | TCTTTTATTCAATCATTCTT+TGG | - | Chr6:92217470-92217489 | MsG0680034655.01.T01:CDS | 20.0% |
| !!! | TGCAATAACTTTTTTAGATT+TGG | - | Chr6:92216569-92216588 | MsG0680034655.01.T01:CDS | 20.0% |
| !!! | TTTAAGGTTTTTTTCAATTG+GGG | - | Chr6:92216089-92216108 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | TTTGAAGGTTTTTCTTAATT+GGG | - | Chr6:92216170-92216189 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | TTTTAAGGTTTTTCTCAATT+GGG | - | Chr6:92215891-92215910 | MsG0680034655.01.T01:exon | 20.0% |
| !!! | TTTTGAAGGTTTTTCTTAAT+TGG | - | Chr6:92216169-92216188 | MsG0680034655.01.T01:intron | 20.0% |
| !!! | TTTTTAAGGTTTTTCTCAAT+TGG | - | Chr6:92215890-92215909 | MsG0680034655.01.T01:exon | 20.0% |
| ! | AACCAACAAAAGAATTGTAA+TGG | - | Chr6:92215590-92215609 | MsG0680034655.01.T01:three_prime_UTR | 25.0% |
| ! | ACCAACAAAAGAATTGTAAT+GGG | - | Chr6:92215591-92215610 | MsG0680034655.01.T01:three_prime_UTR | 25.0% |
| ! | ACCTAAAACTTAGATTGAAT+TGG | + | Chr6:92217191-92217210 | None:intergenic | 25.0% |
| ! | ACTTTCTTAGAAAAAAGCAA+AGG | + | Chr6:92215657-92215676 | None:intergenic | 25.0% |
| ! | AGATGAATTGACATTTGAAT+AGG | + | Chr6:92216994-92217013 | None:intergenic | 25.0% |
| ! | CAATTGGGTTTCTTAAAATT+TGG | - | Chr6:92216021-92216040 | MsG0680034655.01.T01:intron | 25.0% |
| ! | CTTATGGGTTTCTTAAAAAT+TGG | - | Chr6:92215824-92215843 | MsG0680034655.01.T01:three_prime_UTR | 25.0% |
| ! | CTTTCTTAGAAAAAAGCAAA+GGG | + | Chr6:92215656-92215675 | None:intergenic | 25.0% |
| ! | GAACATAAGAAGAAGAAAAT+GGG | - | Chr6:92216771-92216790 | MsG0680034655.01.T01:intron | 25.0% |
| ! | GATTCTTACTTTGTGTATTA+TGG | - | Chr6:92216627-92216646 | MsG0680034655.01.T01:CDS | 25.0% |
| ! | GTAATCAAAAGTCAAGAATT+TGG | - | Chr6:92217299-92217318 | MsG0680034655.01.T01:intron | 25.0% |
| ! | TGAACATAAGAAGAAGAAAA+TGG | - | Chr6:92216770-92216789 | MsG0680034655.01.T01:intron | 25.0% |
| ! | TTACAAATGAAAGAAACATC+AGG | + | Chr6:92217081-92217100 | None:intergenic | 25.0% |
| ! | TTCATTGTTGAATTATTGGA+AGG | - | Chr6:92216228-92216247 | MsG0680034655.01.T01:intron | 25.0% |
| !! | ACCAATTCAATCTAAGTTTT+AGG | - | Chr6:92217187-92217206 | MsG0680034655.01.T01:intron | 25.0% |
| !! | CCATTCTTTTTGTATCTATA+CGG | + | Chr6:92216379-92216398 | None:intergenic | 25.0% |
| !! | TTTATAAATGCCACTTGATT+AGG | + | Chr6:92216962-92216981 | None:intergenic | 25.0% |
| !! | TTTTCAATTTTGCTTGAGTT+AGG | - | Chr6:92217362-92217381 | MsG0680034655.01.T01:CDS | 25.0% |
| !!! | AAGTTTTGATTTTGAAGGTT+TGG | - | Chr6:92216118-92216137 | MsG0680034655.01.T01:intron | 25.0% |
| !!! | ACTTTGTTTTGTATGGTTTT+TGG | - | Chr6:92216336-92216355 | MsG0680034655.01.T01:CDS | 25.0% |
| !!! | ATTTGTTGTATTGATGTATG+TGG | - | Chr6:92216295-92216314 | MsG0680034655.01.T01:intron | 25.0% |
| !!! | GATATTGTGATTTGTTCTTA+TGG | - | Chr6:92215808-92215827 | MsG0680034655.01.T01:three_prime_UTR | 25.0% |
| !!! | TAATTTTTTCCCTCAACAAT+TGG | - | Chr6:92215683-92215702 | MsG0680034655.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTAAGGTTTTTCTCAATTG+GGG | - | Chr6:92215892-92215911 | MsG0680034655.01.T01:exon | 25.0% |
| !!! | TTTTAGGTTGTGTAAATTGT+AGG | - | Chr6:92217203-92217222 | MsG0680034655.01.T01:intron | 25.0% |
| AAGAAATATGCCCATATGTT+TGG | - | Chr6:92217128-92217147 | MsG0680034655.01.T01:intron | 30.0% | |
| ATATATCCTTCATGCATAGT+GGG | + | Chr6:92216706-92216725 | None:intergenic | 30.0% | |
| ATCATATTCTCCAATTGTTG+AGG | + | Chr6:92215696-92215715 | None:intergenic | 30.0% | |
| ATTGGAGAATATGATGTGTT+TGG | - | Chr6:92215701-92215720 | MsG0680034655.01.T01:three_prime_UTR | 30.0% | |
| CCGTATAGATACAAAAAGAA+TGG | - | Chr6:92216376-92216395 | MsG0680034655.01.T01:CDS | 30.0% | |
| CTTCTTCTTATGTTCATTTC+TGG | + | Chr6:92216766-92216785 | None:intergenic | 30.0% | |
| GTTATCTTGCAGAGTAATTT+GGG | - | Chr6:92216652-92216671 | MsG0680034655.01.T01:CDS | 30.0% | |
| TCATATTCTCCAATTGTTGA+GGG | + | Chr6:92215695-92215714 | None:intergenic | 30.0% | |
| TGTTATCTTGCAGAGTAATT+TGG | - | Chr6:92216651-92216670 | MsG0680034655.01.T01:CDS | 30.0% | |
| TTTGTAGATTCCAAAAGCAA+GGG | + | Chr6:92217235-92217254 | None:intergenic | 30.0% | |
| ! | AACCTCTATTTCCTTTTCTT+GGG | + | Chr6:92216404-92216423 | None:intergenic | 30.0% |
| ! | ACCCATTACAATTCTTTTGT+TGG | + | Chr6:92215595-92215614 | None:intergenic | 30.0% |
| ! | CTTTTGATAAGTGCTCAAAA+GGG | - | Chr6:92216424-92216443 | MsG0680034655.01.T01:intron | 30.0% |
| ! | GAATTGACTTTGTACATCTA+CGG | + | Chr6:92217448-92217467 | None:intergenic | 30.0% |
| ! | TATTTTTCTTGATGTCTCAG+CGG | + | Chr6:92216887-92216906 | None:intergenic | 30.0% |
| ! | TCTTTTACTTTCAAGGTCTT+TGG | - | Chr6:92215614-92215633 | MsG0680034655.01.T01:three_prime_UTR | 30.0% |
| ! | TCTTTTGATAAGTGCTCAAA+AGG | - | Chr6:92216423-92216442 | MsG0680034655.01.T01:intron | 30.0% |
| !! | AGAAGCACTCAAAAGATATT+AGG | - | Chr6:92217265-92217284 | MsG0680034655.01.T01:intron | 30.0% |
| !! | TAATGGGTCTTTTACTTTCA+AGG | - | Chr6:92215607-92215626 | MsG0680034655.01.T01:three_prime_UTR | 30.0% |
| AAAGAATGGAACCCAAGAAA+AGG | - | Chr6:92216390-92216409 | MsG0680034655.01.T01:CDS | 35.0% | |
| AACCCAAGAAAAGGAAATAG+AGG | - | Chr6:92216399-92216418 | MsG0680034655.01.T01:CDS | 35.0% | |
| AATAACACCAGCTTCTTCTA+TGG | + | Chr6:92216521-92216540 | None:intergenic | 35.0% | |
| CATATATCCTTCATGCATAG+TGG | + | Chr6:92216707-92216726 | None:intergenic | 35.0% | |
| CATTTGCAACGTTATGAACA+AGG | - | Chr6:92215744-92215763 | MsG0680034655.01.T01:three_prime_UTR | 35.0% | |
| CTTCCTTCATCCAAACATAT+GGG | + | Chr6:92217141-92217160 | None:intergenic | 35.0% | |
| CTTTGTAGATTCCAAAAGCA+AGG | + | Chr6:92217236-92217255 | None:intergenic | 35.0% | |
| GAATTCTTAGAGTGTAGTTG+AGG | - | Chr6:92217401-92217420 | MsG0680034655.01.T01:CDS | 35.0% | |
| TGCAGAGTAATTTGGGTAAA+TGG | - | Chr6:92216659-92216678 | MsG0680034655.01.T01:CDS | 35.0% | |
| TTAGCAAGGAGTTGGATAAT+TGG | - | Chr6:92216740-92216759 | MsG0680034655.01.T01:intron | 35.0% | |
| TTGGGAAAAAGATGAAACCA+TGG | - | Chr6:92216474-92216493 | MsG0680034655.01.T01:intron | 35.0% | |
| ! | ATTTTTCTTGATGTCTCAGC+GGG | + | Chr6:92216886-92216905 | None:intergenic | 35.0% |
| ! | GAACCTCTATTTCCTTTTCT+TGG | + | Chr6:92216405-92216424 | None:intergenic | 35.0% |
| ! | GTTGATGAGAAAAAGAAGAG+AGG | + | Chr6:92215562-92215581 | None:intergenic | 35.0% |
| !! | ATAGAAGAAGCTGGTGTTAT+TGG | - | Chr6:92216520-92216539 | MsG0680034655.01.T01:intron | 35.0% |
| !! | GAAGGAAGCTTTAGATGAAT+TGG | - | Chr6:92217153-92217172 | MsG0680034655.01.T01:intron | 35.0% |
| !!! | TGCTTTTGGAATCTACAAAG+TGG | - | Chr6:92217236-92217255 | MsG0680034655.01.T01:intron | 35.0% |
| AAACCTTGAGCCTAATCAAG+TGG | - | Chr6:92216949-92216968 | MsG0680034655.01.T01:intron | 40.0% | |
| AACTCCTTGCTAACAAGCAA+AGG | + | Chr6:92216733-92216752 | None:intergenic | 40.0% | |
| ACTCCTTGCTAACAAGCAAA+GGG | + | Chr6:92216732-92216751 | None:intergenic | 40.0% | |
| AGAGAAACCATAGAAGAAGC+TGG | - | Chr6:92216511-92216530 | MsG0680034655.01.T01:intron | 40.0% | |
| ATAAGTGCTCAAAAGGGTAG+TGG | - | Chr6:92216430-92216449 | MsG0680034655.01.T01:intron | 40.0% | |
| ATGCCCATATGTTTGGATGA+AGG | - | Chr6:92217135-92217154 | MsG0680034655.01.T01:intron | 40.0% | |
| GCTTCCTTCATCCAAACATA+TGG | + | Chr6:92217142-92217161 | None:intergenic | 40.0% | |
| TGCAAATGTCTACCAGTTCT+AGG | + | Chr6:92215732-92215751 | None:intergenic | 40.0% | |
| TGTAATCATGCAGTTGACTG+TGG | - | Chr6:92217096-92217115 | MsG0680034655.01.T01:intron | 40.0% | |
| TTGACTTTGTACATCTACGG+TGG | + | Chr6:92217445-92217464 | None:intergenic | 40.0% | |
| ! | CTTTTTCCCAACCTCCTTTT+GGG | + | Chr6:92216465-92216484 | None:intergenic | 40.0% |
| ! | TCTTTTTCCCAACCTCCTTT+TGG | + | Chr6:92216466-92216485 | None:intergenic | 40.0% |
| ! | TGTTTGGTTTCTCCTAGAAC+TGG | - | Chr6:92215717-92215736 | MsG0680034655.01.T01:three_prime_UTR | 40.0% |
| ! | TTTGCTTGTTAGCAAGGAGT+TGG | - | Chr6:92216732-92216751 | MsG0680034655.01.T01:intron | 40.0% |
| AGTGGAATGCAGTTCCCAAA+AGG | - | Chr6:92216448-92216467 | MsG0680034655.01.T01:intron | 45.0% | |
| TCTACGGTGGATCACTTCTA+AGG | + | Chr6:92217432-92217451 | None:intergenic | 45.0% | |
| ! | AAGGATGTCGTCAAGTTGTG+GGG | - | Chr6:92215763-92215782 | MsG0680034655.01.T01:three_prime_UTR | 45.0% |
| ! | ACAAGGATGTCGTCAAGTTG+TGG | - | Chr6:92215761-92215780 | MsG0680034655.01.T01:three_prime_UTR | 45.0% |
| ! | ATGCCACTTGATTAGGCTCA+AGG | + | Chr6:92216955-92216974 | None:intergenic | 45.0% |
| ! | CAAGGATGTCGTCAAGTTGT+GGG | - | Chr6:92215762-92215781 | MsG0680034655.01.T01:three_prime_UTR | 45.0% |
| ! | CGACACGATTGTTGCTATTG+CGG | - | Chr6:92216819-92216838 | MsG0680034655.01.T01:intron | 45.0% |
| ! | GTTCCCTTTGCTTGTTAGCA+AGG | - | Chr6:92216726-92216745 | MsG0680034655.01.T01:intron | 45.0% |
| ! | TAGGCATTCTCCCTTGCTTT+TGG | - | Chr6:92217222-92217241 | MsG0680034655.01.T01:intron | 45.0% |
| ! | TCTCAAAGCAGCTTGTTCCA+TGG | + | Chr6:92216494-92216513 | None:intergenic | 45.0% |
| !! | ATCCTTCATGCATAGTGGGT+TGG | + | Chr6:92216702-92216721 | None:intergenic | 45.0% |
| !!! | CAAATTTTTAAAAAATTTTA+AGG | - | Chr6:92216073-92216092 | MsG0680034655.01.T01:intron | 5.0% |
| GCAGTTCCCAAAAGGAGGTT+GGG | - | Chr6:92216456-92216475 | MsG0680034655.01.T01:intron | 50.0% | |
| GGAATGCAGTTCCCAAAAGG+AGG | - | Chr6:92216451-92216470 | MsG0680034655.01.T01:intron | 50.0% | |
| TGATGTCACAGCGCAGATTG+AGG | - | Chr6:92216908-92216927 | MsG0680034655.01.T01:intron | 50.0% | |
| TGCAGTTCCCAAAAGGAGGT+TGG | - | Chr6:92216455-92216474 | MsG0680034655.01.T01:intron | 50.0% | |
| CGCCAACCCACTATGCATGA+AGG | - | Chr6:92216697-92216716 | MsG0680034655.01.T01:CDS | 55.0% | |
| ! | GTCTCAGCGGGCTTCGATTG+TGG | + | Chr6:92216874-92216893 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 92215510 | 92217584 | 92215510 | ID=MsG0680034655.01;Name=MsG0680034655.01 |
| Chr6 | mRNA | 92215510 | 92217584 | 92215510 | ID=MsG0680034655.01.T01;Parent=MsG0680034655.01;Name=MsG0680034655.01.T01;_AED=0.24;_eAED=0.33;_QI=0|0.5|0.6|1|0.5|0.6|5|383|243 |
| Chr6 | exon | 92215510 | 92215985 | 92215510 | ID=MsG0680034655.01.T01:exon:5317;Parent=MsG0680034655.01.T01 |
| Chr6 | exon | 92216302 | 92216430 | 92216302 | ID=MsG0680034655.01.T01:exon:5316;Parent=MsG0680034655.01.T01 |
| Chr6 | exon | 92216542 | 92216725 | 92216542 | ID=MsG0680034655.01.T01:exon:5315;Parent=MsG0680034655.01.T01 |
| Chr6 | exon | 92217156 | 92217196 | 92217156 | ID=MsG0680034655.01.T01:exon:5314;Parent=MsG0680034655.01.T01 |
| Chr6 | exon | 92217300 | 92217584 | 92217300 | ID=MsG0680034655.01.T01:exon:5313;Parent=MsG0680034655.01.T01 |
| Chr6 | CDS | 92217300 | 92217584 | 92217300 | ID=MsG0680034655.01.T01:cds;Parent=MsG0680034655.01.T01 |
| Chr6 | CDS | 92217156 | 92217196 | 92217156 | ID=MsG0680034655.01.T01:cds;Parent=MsG0680034655.01.T01 |
| Chr6 | CDS | 92216542 | 92216725 | 92216542 | ID=MsG0680034655.01.T01:cds;Parent=MsG0680034655.01.T01 |
| Chr6 | CDS | 92216302 | 92216430 | 92216302 | ID=MsG0680034655.01.T01:cds;Parent=MsG0680034655.01.T01 |
| Chr6 | CDS | 92215893 | 92215985 | 92215893 | ID=MsG0680034655.01.T01:cds;Parent=MsG0680034655.01.T01 |
| Chr6 | three_prime_UTR | 92215510 | 92215892 | 92215510 | ID=MsG0680034655.01.T01:three_prime_utr;Parent=MsG0680034655.01.T01 |
| Gene Sequence |
| Protein sequence |
