Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062600 | sp|Q8L3W1|VRN1_ARATH | 26.190 | 336 | 195 | 10 | 5 | 297 | 11 | 336 | 4.64e-18 | 88.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062600 | A0A396JPN4 | 73.165 | 436 | 85 | 5 | 19 | 439 | 20 | 438 | 0.0 | 631 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0062600 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013670 | Msa0062600 | 0.847397 | 1.186912e-59 | -8.615850e-47 |
| Msa0017510 | Msa0062600 | 0.806097 | 9.703128e-50 | -8.615850e-47 |
| Msa0062600 | Msa0067940 | 0.849491 | 3.126015e-60 | -8.615850e-47 |
| Msa0062600 | Msa0107020 | 0.905320 | 4.863795e-80 | -8.615850e-47 |
| Msa0062600 | Msa0107120 | 0.945042 | 6.387369e-104 | -8.615850e-47 |
| Msa0062600 | Msa0107180 | 0.946901 | 1.899013e-105 | -8.615850e-47 |
| Msa0062600 | Msa0128020 | 0.807670 | 4.513599e-50 | -8.615850e-47 |
| Msa0062600 | Msa0157290 | 0.805680 | 1.187612e-49 | -8.615850e-47 |
| Msa0062600 | Msa0215680 | 0.939805 | 6.840988e-100 | -8.615850e-47 |
| Msa0062600 | Msa0222890 | 0.820465 | 6.763609e-53 | -8.615850e-47 |
| Msa0062600 | Msa0487800 | 0.821110 | 4.805413e-53 | -8.615850e-47 |
| Msa0062600 | Msa0498650 | 0.803597 | 3.231508e-49 | -8.615850e-47 |
| Msa0062600 | Msa0602390 | 0.818362 | 2.039606e-52 | -8.615850e-47 |
| Msa0062600 | Msa0610430 | 0.828721 | 7.678427e-55 | -8.615850e-47 |
| Msa0062600 | Msa0621490 | 0.803236 | 3.838182e-49 | -8.615850e-47 |
| Msa0062600 | Msa0691380 | 0.806295 | 8.815188e-50 | -8.615850e-47 |
| Msa0062600 | Msa0692830 | 0.807241 | 5.563863e-50 | -8.615850e-47 |
| Msa0062600 | Msa0692950 | 0.818357 | 2.044491e-52 | -8.615850e-47 |
| Msa0062600 | Msa0743720 | 0.818833 | 1.594441e-52 | -8.615850e-47 |
| Msa0062600 | Msa0796700 | 0.818566 | 1.833417e-52 | -8.615850e-47 |
| Msa0062600 | Msa0822870 | 0.805941 | 1.046478e-49 | -8.615850e-47 |
| Msa0062600 | Msa0880140 | 0.802868 | 4.572867e-49 | -8.615850e-47 |
| Msa0062600 | Msa0945970 | 0.804261 | 2.351749e-49 | -8.615850e-47 |
| Msa0062600 | Msa0947660 | 0.813390 | 2.622370e-51 | -8.615850e-47 |
| Msa0062600 | Msa0993290 | 0.817010 | 4.116265e-52 | -8.615850e-47 |
| Msa0062600 | Msa0993600 | 0.820048 | 8.425191e-53 | -8.615850e-47 |
| Msa0062600 | Msa1005880 | 0.811181 | 7.958966e-51 | -8.615850e-47 |
| Msa0062600 | Msa1014540 | 0.832392 | 9.704886e-56 | -8.615850e-47 |
| Msa0062600 | Msa1124960 | 0.802173 | 6.360734e-49 | -8.615850e-47 |
| Msa0062600 | Msa1189430 | 0.801254 | 9.821231e-49 | -8.615850e-47 |
| Msa0062600 | Msa1204090 | 0.802077 | 6.655996e-49 | -8.615850e-47 |
| Msa0062600 | Msa1244250 | 0.807081 | 6.017467e-50 | -8.615850e-47 |
| Msa0062600 | Msa1253020 | 0.810277 | 1.248941e-50 | -8.615850e-47 |
| Msa0062600 | Msa1269230 | 0.803179 | 3.943720e-49 | -8.615850e-47 |
| Msa0062600 | Msa1277660 | 0.807974 | 3.889003e-50 | -8.615850e-47 |
| Msa0062600 | Msa1466540 | 0.803803 | 2.927927e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062600 | MtrunA17_Chr1g0163181 | 73.165 | 436 | 85 | 5 | 19 | 439 | 20 | 438 | 0.0 | 631 |
| Msa0062600 | MtrunA17_Chr1g0163201 | 70.465 | 430 | 70 | 5 | 18 | 437 | 17 | 399 | 0.0 | 561 |
| Msa0062600 | MtrunA17_Chr1g0163151 | 66.534 | 251 | 52 | 2 | 184 | 431 | 1 | 222 | 1.57e-112 | 330 |
| Msa0062600 | MtrunA17_Chr1g0163111 | 65.476 | 252 | 62 | 5 | 184 | 432 | 1 | 230 | 6.27e-106 | 313 |
| Msa0062600 | MtrunA17_Chr1g0163251 | 49.854 | 343 | 121 | 4 | 19 | 344 | 20 | 328 | 5.87e-103 | 311 |
| Msa0062600 | MtrunA17_Chr1g0163231 | 45.695 | 302 | 120 | 8 | 9 | 299 | 13 | 281 | 1.27e-77 | 243 |
| Msa0062600 | MtrunA17_Chr1g0163261 | 42.857 | 308 | 138 | 5 | 9 | 306 | 13 | 292 | 4.59e-77 | 242 |
| Msa0062600 | MtrunA17_Chr1g0171611 | 45.545 | 303 | 107 | 8 | 9 | 299 | 13 | 269 | 8.31e-74 | 233 |
| Msa0062600 | MtrunA17_Chr1g0163191 | 73.750 | 160 | 22 | 2 | 19 | 178 | 20 | 159 | 1.88e-64 | 204 |
| Msa0062600 | MtrunA17_Chr1g0163241 | 62.264 | 159 | 28 | 2 | 18 | 175 | 21 | 148 | 4.24e-56 | 183 |
| Msa0062600 | MtrunA17_Chr6g0476171 | 34.307 | 274 | 142 | 6 | 165 | 430 | 2 | 245 | 2.84e-41 | 147 |
| Msa0062600 | MtrunA17_Chr1g0162151 | 35.857 | 251 | 109 | 6 | 184 | 428 | 1 | 205 | 1.84e-38 | 138 |
| Msa0062600 | MtrunA17_Chr1g0208771 | 27.061 | 473 | 267 | 16 | 13 | 429 | 6 | 456 | 3.65e-38 | 144 |
| Msa0062600 | MtrunA17_Chr1g0163131 | 31.757 | 296 | 183 | 10 | 9 | 296 | 22 | 306 | 5.14e-35 | 132 |
| Msa0062600 | MtrunA17_Chr1g0163131 | 38.750 | 160 | 81 | 7 | 288 | 432 | 151 | 308 | 1.97e-20 | 91.7 |
| Msa0062600 | MtrunA17_Chr8g0390841 | 25.410 | 488 | 285 | 17 | 8 | 429 | 42 | 516 | 1.40e-34 | 135 |
| Msa0062600 | MtrunA17_Chr7g0233561 | 31.153 | 321 | 186 | 10 | 5 | 307 | 19 | 322 | 2.57e-34 | 130 |
| Msa0062600 | MtrunA17_Chr1g0163091 | 42.424 | 132 | 71 | 1 | 184 | 310 | 1 | 132 | 1.98e-31 | 118 |
| Msa0062600 | MtrunA17_Chr3g0131891 | 30.537 | 298 | 181 | 9 | 9 | 297 | 23 | 303 | 1.51e-30 | 120 |
| Msa0062600 | MtrunA17_Chr7g0233541 | 31.615 | 291 | 174 | 9 | 20 | 297 | 2 | 280 | 2.87e-30 | 119 |
| Msa0062600 | MtrunA17_Chr7g0233521 | 31.930 | 285 | 164 | 9 | 20 | 297 | 2 | 263 | 4.72e-30 | 117 |
| Msa0062600 | MtrunA17_Chr7g0233531 | 32.517 | 286 | 161 | 10 | 20 | 297 | 2 | 263 | 1.40e-26 | 108 |
| Msa0062600 | MtrunA17_Chr3g0103171 | 27.143 | 280 | 181 | 8 | 19 | 295 | 5 | 264 | 3.17e-25 | 103 |
| Msa0062600 | MtrunA17_Chr1g0163101 | 46.729 | 107 | 54 | 2 | 20 | 126 | 33 | 136 | 5.98e-25 | 100 |
| Msa0062600 | MtrunA17_Chr1g0163071 | 24.919 | 309 | 202 | 7 | 20 | 309 | 2 | 299 | 1.88e-24 | 102 |
| Msa0062600 | MtrunA17_Chr1g0162161 | 41.818 | 110 | 61 | 2 | 20 | 129 | 4 | 110 | 2.29e-24 | 99.0 |
| Msa0062600 | MtrunA17_Chr1g0163121 | 44.545 | 110 | 58 | 2 | 20 | 129 | 11 | 117 | 1.14e-23 | 96.3 |
| Msa0062600 | MtrunA17_Chr3g0103181 | 24.742 | 291 | 189 | 8 | 8 | 295 | 15 | 278 | 9.96e-23 | 97.4 |
| Msa0062600 | MtrunA17_Chr6g0476181 | 40.800 | 125 | 67 | 3 | 20 | 143 | 2 | 120 | 1.26e-22 | 94.0 |
| Msa0062600 | MtrunA17_Chr1g0163081 | 40.000 | 110 | 63 | 2 | 20 | 129 | 6 | 112 | 6.60e-22 | 91.7 |
| Msa0062600 | MtrunA17_Chr4g0067431 | 26.936 | 297 | 202 | 10 | 9 | 295 | 19 | 310 | 9.26e-22 | 95.5 |
| Msa0062600 | MtrunA17_Chr7g0233571 | 31.156 | 199 | 126 | 5 | 20 | 214 | 26 | 217 | 2.02e-20 | 89.7 |
| Msa0062600 | MtrunA17_Chr1g0163221 | 27.907 | 301 | 178 | 10 | 6 | 295 | 17 | 289 | 9.64e-19 | 87.4 |
| Msa0062600 | MtrunA17_Chr1g0163141 | 40.625 | 96 | 56 | 1 | 20 | 115 | 11 | 105 | 3.88e-18 | 82.0 |
| Msa0062600 | MtrunA17_Chr3g0103151 | 35.897 | 117 | 70 | 3 | 8 | 122 | 15 | 128 | 2.45e-17 | 79.3 |
| Msa0062600 | MtrunA17_Chr1g0163161 | 41.053 | 95 | 53 | 2 | 32 | 126 | 1 | 92 | 3.56e-17 | 77.8 |
| Msa0062600 | MtrunA17_Chr3g0103191 | 30.968 | 155 | 99 | 4 | 19 | 167 | 25 | 177 | 7.42e-17 | 80.1 |
| Msa0062600 | MtrunA17_Chr5g0419201 | 34.375 | 128 | 77 | 2 | 20 | 140 | 32 | 159 | 1.24e-16 | 77.8 |
| Msa0062600 | MtrunA17_Chr1g0154041 | 24.204 | 314 | 187 | 10 | 19 | 285 | 30 | 339 | 1.34e-14 | 75.9 |
| Msa0062600 | MtrunA17_Chr6g0467351 | 32.773 | 119 | 71 | 4 | 14 | 123 | 24 | 142 | 7.30e-12 | 65.1 |
| Msa0062600 | MtrunA17_Chr5g0419211 | 31.373 | 102 | 69 | 1 | 218 | 318 | 10 | 111 | 8.17e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062600 | AT3G18990.2 | 25.959 | 339 | 198 | 10 | 5 | 300 | 11 | 339 | 2.17e-19 | 89.7 |
| Msa0062600 | AT3G18990.1 | 26.190 | 336 | 195 | 10 | 5 | 297 | 11 | 336 | 4.72e-19 | 88.6 |
Find 83 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTAGCTGTGCTTCTTTA+AGG | 0.068553 | 1_2:-22160710 | Msa0062600:exon |
| AAATATCTTGGAGTTGAAAA+TGG | 0.201158 | 1_2:-22160909 | Msa0062600:CDS |
| ATAAATATCCAGCACTTTAA+AGG | 0.218530 | 1_2:+22160660 | None:intergenic |
| GGTAATGTGCTTTAAACTTT+AGG | 0.223091 | 1_2:-22160534 | Msa0062600:three_prime_UTR |
| TTTGTAAAGCCTTTCAAATA+TGG | 0.242052 | 1_2:-22162923 | Msa0062600:CDS |
| TATTTCTCCACATATTTCTT+TGG | 0.248757 | 1_2:+22163058 | None:intergenic |
| TTCATCAACTGATTTGATAT+TGG | 0.261684 | 1_2:+22162817 | None:intergenic |
| CATTAACAGCTTCAGATCTT+AGG | 0.270045 | 1_2:+22162210 | None:intergenic |
| AGGCTGACACAATACTTCTT+AGG | 0.277919 | 1_2:+22160581 | None:intergenic |
| AGAAATATGTGGAGAAATAT+TGG | 0.281812 | 1_2:-22163054 | Msa0062600:CDS |
| TGGAGAGTAATGGTGATATT+TGG | 0.287546 | 1_2:-22162967 | Msa0062600:CDS |
| TTAATGGAACTACAACAATA+AGG | 0.294713 | 1_2:-22162017 | Msa0062600:CDS |
| GTGTTTGATGTTTCAATTGT+AGG | 0.300485 | 1_2:-22160740 | Msa0062600:CDS |
| CTCTTAACTTTCAAATTCAT+TGG | 0.314459 | 1_2:-22162896 | Msa0062600:CDS |
| TTAGGAAACTTAAGGAATAT+AGG | 0.318222 | 1_2:+22163016 | None:intergenic |
| ATAGTAACATTGAATGAAAT+TGG | 0.319993 | 1_2:+22161847 | None:intergenic |
| AGAAAACCTAGTGATTTCTT+TGG | 0.323706 | 1_2:+22161799 | None:intergenic |
| AGAGCAATACCCTTTACTTT+TGG | 0.331691 | 1_2:+22161608 | None:intergenic |
| CCTAGTGATTTCTTTGGCTT+TGG | 0.332979 | 1_2:+22161805 | None:intergenic |
| CTGGTCCTTTGAGTTTGCTT+TGG | 0.341746 | 1_2:+22162632 | None:intergenic |
| TAGGAAACTTAAGGAATATA+GGG | 0.346499 | 1_2:+22163017 | None:intergenic |
| TGTTCTCTTGAAAACTCATT+TGG | 0.346666 | 1_2:+22162051 | None:intergenic |
| AGAAGTATTGTGTCAGCCTT+TGG | 0.355165 | 1_2:-22160577 | Msa0062600:three_prime_UTR |
| AATATCTTGGAGTTGAAAAT+GGG | 0.359463 | 1_2:-22160908 | Msa0062600:CDS |
| TAATGGAACTACAACAATAA+GGG | 0.368234 | 1_2:-22162016 | Msa0062600:CDS |
| TGCTTTGCCCTTTAAAGTGC+TGG | 0.375844 | 1_2:-22160668 | Msa0062600:three_prime_UTR |
| ACTTTCTTCACCTTCTTCAA+TGG | 0.380996 | 1_2:+22162694 | None:intergenic |
| TCATGATTCATAAACTCCTT+TGG | 0.383485 | 1_2:+22160932 | None:intergenic |
| TATGAATCATGAAAATATCT+TGG | 0.394934 | 1_2:-22160921 | Msa0062600:CDS |
| CAACACCGTTAGGAAACTTA+AGG | 0.403140 | 1_2:+22163008 | None:intergenic |
| ATAGTTTATTTCTAAAGTAT+TGG | 0.406626 | 1_2:+22162841 | None:intergenic |
| CCTTAAAGAAGCACAGCTAA+TGG | 0.407485 | 1_2:+22160710 | None:intergenic |
| GTGGTGGATGGAAAATATTC+AGG | 0.420444 | 1_2:-22161927 | Msa0062600:CDS |
| TAAATATCCAGCACTTTAAA+GGG | 0.428813 | 1_2:+22160661 | None:intergenic |
| TTTAGGTTCTATGATATTTG+TGG | 0.430149 | 1_2:-22160517 | Msa0062600:three_prime_UTR |
| AAAGAATGCAAAGTGGAGAT+TGG | 0.431700 | 1_2:-22160803 | Msa0062600:CDS |
| AAATATTATGAGAGTCTTTG+TGG | 0.437608 | 1_2:-22160860 | Msa0062600:CDS |
| AGTCTTTGTGGCTGTAAGTT+CGG | 0.438865 | 1_2:-22160848 | Msa0062600:CDS |
| CAAACTCAAAGGACCAGAAA+TGG | 0.451853 | 1_2:-22162626 | Msa0062600:CDS |
| GATATTTGTTCTGTGATTGT+TGG | 0.466702 | 1_2:-22160555 | Msa0062600:three_prime_UTR |
| TTAACTTTCAAATTCATTGG+TGG | 0.475675 | 1_2:-22162893 | Msa0062600:CDS |
| AGGAGCCATCCAAAAGTAAA+GGG | 0.477165 | 1_2:-22161617 | Msa0062600:intron |
| TAGGAGCCATCCAAAAGTAA+AGG | 0.478853 | 1_2:-22161618 | Msa0062600:CDS |
| CAAAGTGGCCATGGTAAAGA+AGG | 0.488314 | 1_2:-22162243 | Msa0062600:CDS |
| TGAAAATGGGGAGAAAATCA+TGG | 0.492046 | 1_2:-22160895 | Msa0062600:CDS |
| TGACATTATAACTTCAAAAG+AGG | 0.495408 | 1_2:+22162181 | None:intergenic |
| TGTGGCTGTAAGTTCGGTAA+AGG | 0.504977 | 1_2:-22160842 | Msa0062600:CDS |
| GCTGTAAGTTCGGTAAAGGT+TGG | 0.518813 | 1_2:-22160838 | Msa0062600:CDS |
| AAGAGATATCCATATTTGAA+AGG | 0.520085 | 1_2:+22162914 | None:intergenic |
| TGGTTGGAAGTCGTTTGTGC+AGG | 0.521812 | 1_2:-22164477 | Msa0062600:CDS |
| AATGGCAAGAGAAAATTCTC+AGG | 0.523324 | 1_2:-22162608 | Msa0062600:intron |
| GACATTATAACTTCAAAAGA+GGG | 0.525934 | 1_2:+22162182 | None:intergenic |
| AAGACATTGGAGGAACATCT+AGG | 0.526190 | 1_2:-22161637 | Msa0062600:CDS |
| GAAGGAGCACAAGACATTCA+AGG | 0.537945 | 1_2:-22161182 | Msa0062600:CDS |
| AATATCAAATCAGTTGATGA+AGG | 0.540855 | 1_2:-22162815 | Msa0062600:CDS |
| GATGAGGAAGCCATTGAAGA+AGG | 0.544836 | 1_2:-22162704 | Msa0062600:CDS |
| CCAAAGCCAAAGAAATCACT+AGG | 0.556666 | 1_2:-22161805 | Msa0062600:intron |
| GTAAATTTGAGATGATTCGA+CGG | 0.557247 | 1_2:-22161873 | Msa0062600:CDS |
| GTTGTAAAGAAGCAAGACAT+TGG | 0.558494 | 1_2:-22161650 | Msa0062600:CDS |
| CAATAAGGGTTGGTAATGAA+AGG | 0.558627 | 1_2:-22162002 | Msa0062600:CDS |
| TCCAGAAGGTCGTGATGTGA+AGG | 0.558641 | 1_2:-22161200 | Msa0062600:intron |
| AAGTGATGAATCAAGTGATG+AGG | 0.567308 | 1_2:-22162720 | Msa0062600:CDS |
| AGGTAGTAACAAAGTGGCCA+TGG | 0.577811 | 1_2:-22162252 | Msa0062600:CDS |
| ACTTACAAAGAAATAGCCAT+TGG | 0.583056 | 1_2:+22162148 | None:intergenic |
| AATATTGTATGGGTGGTGGA+TGG | 0.587908 | 1_2:-22161939 | Msa0062600:CDS |
| GGTGCTGAAGACACAGAAGA+AGG | 0.588176 | 1_2:-22162794 | Msa0062600:CDS |
| ATATTCCTTAAGTTTCCTAA+CGG | 0.590322 | 1_2:-22163013 | Msa0062600:CDS |
| GAGTAATGAGAGTTCAGATG+AGG | 0.591415 | 1_2:-22162663 | Msa0062600:CDS |
| GAGGGTTCCAAAGAAATATG+TGG | 0.594786 | 1_2:-22163065 | Msa0062600:CDS |
| GGAACTACAACAATAAGGGT+TGG | 0.596420 | 1_2:-22162012 | Msa0062600:CDS |
| GTATCTGCAGTGTGTACCAA+AGG | 0.598126 | 1_2:-22160948 | Msa0062600:intron |
| GTAAAGAAGCAAGACATTGG+AGG | 0.602206 | 1_2:-22161647 | Msa0062600:CDS |
| ATGTCACAATCTTACGCCAA+TGG | 0.605717 | 1_2:-22162164 | Msa0062600:CDS |
| GGTTGGTAATGAAAGGAGTG+TGG | 0.605745 | 1_2:-22161995 | Msa0062600:CDS |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1_2:-22163049 | Msa0062600:CDS |
| ATCACAGAACAAATATCCAA+AGG | 0.622432 | 1_2:+22160561 | None:intergenic |
| ATTCATGAAAGAATGCAAAG+TGG | 0.625279 | 1_2:-22160810 | Msa0062600:CDS |
| CAGGAACATAACTTGCAAGC+TGG | 0.628096 | 1_2:-22164458 | Msa0062600:CDS |
| TTTCGTGAAGAACAAAACCC+CGG | 0.628138 | 1_2:-22161158 | Msa0062600:intron |
| ATATCTTGGAGTTGAAAATG+GGG | 0.639227 | 1_2:-22160907 | Msa0062600:CDS |
| AAATACCAAAGCAAACTCAA+AGG | 0.654830 | 1_2:-22162637 | Msa0062600:CDS |
| GGAGTGTGGAAGTGAGTGTG+AGG | 0.659449 | 1_2:-22161981 | Msa0062600:CDS |
| CTTGGCAGGTAGTAACAAAG+TGG | 0.671173 | 1_2:-22162258 | Msa0062600:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAAAATGTGATTTTTTT+TGG | - | chr1_2:22162580-22162599 | Msa0062600:intron | 10.0% |
| !! | AACCAAATACTTATATATTA+TGG | + | chr1_2:22160786-22160805 | None:intergenic | 15.0% |
| !!! | ATTTAATCAATTTTGTTAGT+TGG | - | chr1_2:22161066-22161085 | Msa0062600:intron | 15.0% |
| !!! | ATTTTCTATCTAATTTTTTC+TGG | + | chr1_2:22161512-22161531 | None:intergenic | 15.0% |
| !!! | TAAAGATATTTTTTGTAGTA+TGG | + | chr1_2:22161589-22161608 | None:intergenic | 15.0% |
| !!! | TGTTGAACAAAAAATATTTT+GGG | - | chr1_2:22161990-22162009 | Msa0062600:CDS | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1_2:22162028-22162047 | Msa0062600:CDS | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1_2:22162029-22162048 | Msa0062600:CDS | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | - | chr1_2:22162114-22162133 | Msa0062600:intron | 15.0% |
| !!! | ATAGTTTATTTCTAAAGTAT+TGG | + | chr1_2:22162142-22162161 | None:intergenic | 15.0% |
| !!! | TTATTTTAAGAGTTATTGAA+TGG | - | chr1_2:22162479-22162498 | Msa0062600:intron | 15.0% |
| !!! | TTCTTTCTTTCTTTTTTATT+TGG | - | chr1_2:22163200-22163219 | Msa0062600:intron | 15.0% |
| !!! | TTTAGATTTTATTATTGTAG+AGG | - | chr1_2:22163410-22163429 | Msa0062600:intron | 15.0% |
| !!! | TTAGATTTTATTATTGTAGA+GGG | - | chr1_2:22163411-22163430 | Msa0062600:intron | 15.0% |
| !! | AAACTTATGAATGATTTATA+AGG | - | chr1_2:22163501-22163520 | Msa0062600:intron | 15.0% |
| !! | TAAAAAATATTTCAATTCAC+AGG | + | chr1_2:22163577-22163596 | None:intergenic | 15.0% |
| !! | ATTTGAATAGATTTATAGTT+AGG | + | chr1_2:22163694-22163713 | None:intergenic | 15.0% |
| !!! | TCAAATGTATCTAAATTTTT+TGG | - | chr1_2:22163708-22163727 | Msa0062600:intron | 15.0% |
| !!! | CAAATGTATCTAAATTTTTT+GGG | - | chr1_2:22163709-22163728 | Msa0062600:intron | 15.0% |
| !! | TTTATGTAATTATATCTTAC+CGG | + | chr1_2:22163844-22163863 | None:intergenic | 15.0% |
| !!! | TCTTTCGTTATTATTGTTTT+TGG | - | chr1_2:22160648-22160667 | Msa0062600:three_prime_UTR | 20.0% |
| !! | CACCATAATATATAAGTATT+TGG | - | chr1_2:22160781-22160800 | Msa0062600:CDS | 20.0% |
| !! | TATGCATGTATATATATTAC+AGG | - | chr1_2:22160849-22160868 | Msa0062600:CDS | 20.0% |
| !! | ATGCATGTATATATATTACA+GGG | - | chr1_2:22160850-22160869 | Msa0062600:CDS | 20.0% |
| !!! | CTTTTTTATTGTGTCATAAA+TGG | - | chr1_2:22161456-22161475 | Msa0062600:intron | 20.0% |
| !!! | AATATATTCCAGATTTTCAT+AGG | - | chr1_2:22161717-22161736 | Msa0062600:intron | 20.0% |
| !!! | GTGTTGAACAAAAAATATTT+TGG | - | chr1_2:22161989-22162008 | Msa0062600:CDS | 20.0% |
| !!! | AAAATGTGATTTTTTTTGGT+AGG | - | chr1_2:22162584-22162603 | Msa0062600:intron | 20.0% |
| !! | ATAGTAACATTGAATGAAAT+TGG | + | chr1_2:22163136-22163155 | None:intergenic | 20.0% |
| !! | TTATGTAATTATATCTTACC+GGG | + | chr1_2:22163843-22163862 | None:intergenic | 20.0% |
| !! | TACAAACAAAAATATTAGTG+AGG | + | chr1_2:22164015-22164034 | None:intergenic | 20.0% |
| !! | TATGAATCATGAAAATATCT+TGG | - | chr1_2:22164059-22164078 | Msa0062600:intron | 20.0% |
| !!! | CAATTTTAAGCAATGTATTT+TGG | - | chr1_2:22164348-22164367 | Msa0062600:intron | 20.0% |
| ! | ATAGTAATTGTGAATGAAAG+TGG | + | chr1_2:22160582-22160601 | None:intergenic | 25.0% |
| ! | TCAATCATATATGTTCATCA+TGG | - | chr1_2:22160752-22160771 | Msa0062600:CDS | 25.0% |
| !!! | GGTTTTAGTCATTCTAATAT+TGG | - | chr1_2:22160802-22160821 | Msa0062600:CDS | 25.0% |
| !!! | AGTTTTTTTCCAAGTACTAA+AGG | - | chr1_2:22160957-22160976 | Msa0062600:intron | 25.0% |
| ! | TATATATCACCTTTAGTACT+TGG | + | chr1_2:22160969-22160988 | None:intergenic | 25.0% |
| !! | ACTTTATGATGACATAGTTT+TGG | + | chr1_2:22161116-22161135 | None:intergenic | 25.0% |
| !!! | TTTTTACATAAGGTACTGTA+GGG | + | chr1_2:22161325-22161344 | None:intergenic | 25.0% |
| !!! | ATTTTTACATAAGGTACTGT+AGG | + | chr1_2:22161326-22161345 | None:intergenic | 25.0% |
| ! | TACAGTACCTTATGTAAAAA+TGG | - | chr1_2:22161325-22161344 | Msa0062600:intron | 25.0% |
| !!! | ATATCTGCCATTTTTACATA+AGG | + | chr1_2:22161335-22161354 | None:intergenic | 25.0% |
| ! | TGTAAAAATGGCAGATATTA+AGG | - | chr1_2:22161337-22161356 | Msa0062600:intron | 25.0% |
| ! | GTAAAAATGGCAGATATTAA+GGG | - | chr1_2:22161338-22161357 | Msa0062600:intron | 25.0% |
| ! | GCATACATTAAAAAACACAA+TGG | + | chr1_2:22161370-22161389 | None:intergenic | 25.0% |
| ! | TATTTCTCCACATATTTCTT+TGG | + | chr1_2:22161925-22161944 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1_2:22161926-22161945 | Msa0062600:CDS | 25.0% |
| ! | TAGGAAACTTAAGGAATATA+GGG | + | chr1_2:22161966-22161985 | None:intergenic | 25.0% |
| ! | TTAGGAAACTTAAGGAATAT+AGG | + | chr1_2:22161967-22161986 | None:intergenic | 25.0% |
| ! | ATATTCCTTAAGTTTCCTAA+CGG | - | chr1_2:22161967-22161986 | Msa0062600:CDS | 25.0% |
| !!! | TGAACAAAAAATATTTTGGG+TGG | - | chr1_2:22161993-22162012 | Msa0062600:CDS | 25.0% |
| ! | TTTGTAAAGCCTTTCAAATA+TGG | - | chr1_2:22162057-22162076 | Msa0062600:CDS | 25.0% |
| ! | AAGAGATATCCATATTTGAA+AGG | + | chr1_2:22162069-22162088 | None:intergenic | 25.0% |
| ! | CTCTTAACTTTCAAATTCAT+TGG | - | chr1_2:22162084-22162103 | Msa0062600:intron | 25.0% |
| ! | TTAACTTTCAAATTCATTGG+TGG | - | chr1_2:22162087-22162106 | Msa0062600:intron | 25.0% |
| !!! | TTCATCAACTGATTTGATAT+TGG | + | chr1_2:22162166-22162185 | None:intergenic | 25.0% |
| !!! | AATATCAAATCAGTTGATGA+AGG | - | chr1_2:22162165-22162184 | Msa0062600:CDS | 25.0% |
| ! | AAATAGTTAATGCCTAAACT+TGG | - | chr1_2:22162704-22162723 | Msa0062600:CDS | 25.0% |
| ! | GACATTATAACTTCAAAAGA+GGG | + | chr1_2:22162801-22162820 | None:intergenic | 25.0% |
| ! | TGACATTATAACTTCAAAAG+AGG | + | chr1_2:22162802-22162821 | None:intergenic | 25.0% |
| !! | GAACACTTGAAAGATTTTAA+TGG | - | chr1_2:22162947-22162966 | Msa0062600:CDS | 25.0% |
| ! | TTAATGGAACTACAACAATA+AGG | - | chr1_2:22162963-22162982 | Msa0062600:CDS | 25.0% |
| ! | TAATGGAACTACAACAATAA+GGG | - | chr1_2:22162964-22162983 | Msa0062600:CDS | 25.0% |
| ! | TACCCAGAAAAAATATTGTA+TGG | - | chr1_2:22163030-22163049 | Msa0062600:CDS | 25.0% |
| ! | ACCCAGAAAAAATATTGTAT+GGG | - | chr1_2:22163031-22163050 | Msa0062600:CDS | 25.0% |
| !!! | ACCCATACAATATTTTTTCT+GGG | + | chr1_2:22163035-22163054 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTTATCCATGACA+AGG | - | chr1_2:22163276-22163295 | Msa0062600:intron | 25.0% |
| ! | CATGACAAGGTTATAAAAAA+GGG | - | chr1_2:22163289-22163308 | Msa0062600:intron | 25.0% |
| ! | ATGACAAGGTTATAAAAAAG+GGG | - | chr1_2:22163290-22163309 | Msa0062600:intron | 25.0% |
| ! | TGAATGATTTATAAGGTTCT+TGG | - | chr1_2:22163508-22163527 | Msa0062600:intron | 25.0% |
| ! | TAAAAGAAGAAACTGAAAAC+TGG | + | chr1_2:22163663-22163682 | None:intergenic | 25.0% |
| ! | TATGTAATTATATCTTACCG+GGG | + | chr1_2:22163842-22163861 | None:intergenic | 25.0% |
| ! | ATTGAACGAAAGTTAGTTAT+GGG | + | chr1_2:22163897-22163916 | None:intergenic | 25.0% |
| ! | AATTGAACGAAAGTTAGTTA+TGG | + | chr1_2:22163898-22163917 | None:intergenic | 25.0% |
| ! | GAGGTTAAAGTTAATAGAAT+GGG | + | chr1_2:22163956-22163975 | None:intergenic | 25.0% |
| ! | AGAGGTTAAAGTTAATAGAA+TGG | + | chr1_2:22163957-22163976 | None:intergenic | 25.0% |
| ! | ACTTTAACCTCTAATGTATA+AGG | - | chr1_2:22163965-22163984 | Msa0062600:intron | 25.0% |
| ! | AAATATCTTGGAGTTGAAAA+TGG | - | chr1_2:22164071-22164090 | Msa0062600:intron | 25.0% |
| ! | AATATCTTGGAGTTGAAAAT+GGG | - | chr1_2:22164072-22164091 | Msa0062600:intron | 25.0% |
| ! | AAATATTATGAGAGTCTTTG+TGG | - | chr1_2:22164120-22164139 | Msa0062600:intron | 25.0% |
| ! | TAAATATCCAGCACTTTAAA+GGG | + | chr1_2:22164322-22164341 | None:intergenic | 25.0% |
| ! | ATAAATATCCAGCACTTTAA+AGG | + | chr1_2:22164323-22164342 | None:intergenic | 25.0% |
| !! | TTTAGGTTCTATGATATTTG+TGG | - | chr1_2:22164463-22164482 | Msa0062600:CDS | 25.0% |
| !!! | TTTGGCTCAAATCACTTTTT+AGG | + | chr1_2:22161098-22161117 | None:intergenic | 30.0% |
| GAATGAAACATTCAATGACT+CGG | - | chr1_2:22161173-22161192 | Msa0062600:CDS | 30.0% | |
| TGATGATACACACACAAATA+GGG | - | chr1_2:22161221-22161240 | Msa0062600:intron | 30.0% | |
| !!! | CTTTTAATTTGCCACAAAAG+TGG | + | chr1_2:22161258-22161277 | None:intergenic | 30.0% |
| !!! | TTTTTCTGGTGTTACTACTT+TGG | + | chr1_2:22161498-22161517 | None:intergenic | 30.0% |
| AAGATGATCCTATGAAAATC+TGG | + | chr1_2:22161728-22161747 | None:intergenic | 30.0% | |
| TTTGAATTTCTTTGTTGCAG+AGG | - | chr1_2:22161896-22161915 | Msa0062600:CDS | 30.0% | |
| TTGAATTTCTTTGTTGCAGA+GGG | - | chr1_2:22161897-22161916 | Msa0062600:CDS | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_2:22161931-22161950 | Msa0062600:CDS | 30.0% | |
| !!! | ATTTTTTGTTCAACACCGTT+AGG | + | chr1_2:22161985-22162004 | None:intergenic | 30.0% |
| !! | CATTGGTGGATCATATTTTA+AGG | - | chr1_2:22162101-22162120 | Msa0062600:intron | 30.0% |
| AAATACCAAAGCAAACTCAA+AGG | - | chr1_2:22162343-22162362 | Msa0062600:intron | 30.0% | |
| !!! | AGGTGAGTTTGATCTTTTTT+GGG | - | chr1_2:22162392-22162411 | Msa0062600:intron | 30.0% |
| !!! | GATCTTTTTTGGGTAGATTT+AGG | - | chr1_2:22162402-22162421 | Msa0062600:intron | 30.0% |
| ! | AGAGTTATTGAATGGTTTGT+TGG | - | chr1_2:22162487-22162506 | Msa0062600:intron | 30.0% |
| ! | GTTGGAATTTTATGTCTGAA+AGG | - | chr1_2:22162505-22162524 | Msa0062600:intron | 30.0% |
| ACTTACAAAGAAATAGCCAT+TGG | + | chr1_2:22162835-22162854 | None:intergenic | 30.0% | |
| TAAACCATTACTTGAAACAG+TGG | - | chr1_2:22162903-22162922 | Msa0062600:CDS | 30.0% | |
| TGTTCTCTTGAAAACTCATT+TGG | + | chr1_2:22162932-22162951 | None:intergenic | 30.0% | |
| !!! | CACCCATACAATATTTTTTC+TGG | + | chr1_2:22163036-22163055 | None:intergenic | 30.0% |
| CAGAAAAAATATTGTATGGG+TGG | - | chr1_2:22163034-22163053 | Msa0062600:CDS | 30.0% | |
| AAAAAATATTGTATGGGTGG+TGG | - | chr1_2:22163037-22163056 | Msa0062600:CDS | 30.0% | |
| ! | GTAAATTTGAGATGATTCGA+CGG | - | chr1_2:22163107-22163126 | Msa0062600:intron | 30.0% |
| AGAAAACCTAGTGATTTCTT+TGG | + | chr1_2:22163184-22163203 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTATAACCTTGTCA+TGG | + | chr1_2:22163291-22163310 | None:intergenic | 30.0% |
| CCATGACAAGGTTATAAAAA+AGG | - | chr1_2:22163288-22163307 | Msa0062600:intron | 30.0% | |
| ! | AATGGGATTAACTTGACTAA+CGG | + | chr1_2:22163939-22163958 | None:intergenic | 30.0% |
| TTAACCTCTAATGTATAAGG+TGG | - | chr1_2:22163968-22163987 | Msa0062600:intron | 30.0% | |
| TCATGATTCATAAACTCCTT+TGG | + | chr1_2:22164051-22164070 | None:intergenic | 30.0% | |
| ATATCTTGGAGTTGAAAATG+GGG | - | chr1_2:22164073-22164092 | Msa0062600:intron | 30.0% | |
| ATTCATGAAAGAATGCAAAG+TGG | - | chr1_2:22164170-22164189 | Msa0062600:intron | 30.0% | |
| GTGTTTGATGTTTCAATTGT+AGG | - | chr1_2:22164240-22164259 | Msa0062600:intron | 30.0% | |
| ATCACAGAACAAATATCCAA+AGG | + | chr1_2:22164422-22164441 | None:intergenic | 30.0% | |
| GATATTTGTTCTGTGATTGT+TGG | - | chr1_2:22164425-22164444 | Msa0062600:intron | 30.0% | |
| ! | GGTAATGTGCTTTAAACTTT+AGG | - | chr1_2:22164446-22164465 | Msa0062600:intron | 30.0% |
| TACTATTATCCCAGCTACAA+AGG | - | chr1_2:22160596-22160615 | Msa0062600:three_prime_UTR | 35.0% | |
| !! | CAAGCACTGAAACAAAACAA+TGG | - | chr1_2:22160899-22160918 | Msa0062600:CDS | 35.0% |
| GTGATGATACACACACAAAT+AGG | - | chr1_2:22161220-22161239 | Msa0062600:intron | 35.0% | |
| !! | ACAAAGCAAATCCACTTTTG+TGG | - | chr1_2:22161244-22161263 | Msa0062600:intron | 35.0% |
| ACTTTATTACTGTCCAGTAC+AGG | + | chr1_2:22161554-22161573 | None:intergenic | 35.0% | |
| ACTGGACAGTAATAAAGTCT+TGG | - | chr1_2:22161556-22161575 | Msa0062600:intron | 35.0% | |
| !! | GGTGAAAGATTTTGAGTGTT+AGG | + | chr1_2:22161645-22161664 | None:intergenic | 35.0% |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1_2:22162003-22162022 | Msa0062600:CDS | 35.0% |
| TGGAGAGTAATGGTGATATT+TGG | - | chr1_2:22162013-22162032 | Msa0062600:CDS | 35.0% | |
| AAGTGATGAATCAAGTGATG+AGG | - | chr1_2:22162260-22162279 | Msa0062600:intron | 35.0% | |
| ACTTTCTTCACCTTCTTCAA+TGG | + | chr1_2:22162289-22162308 | None:intergenic | 35.0% | |
| !! | GAATTTTCTCTTGCCATTTC+TGG | + | chr1_2:22162370-22162389 | None:intergenic | 35.0% |
| AATGGCAAGAGAAAATTCTC+AGG | - | chr1_2:22162372-22162391 | Msa0062600:intron | 35.0% | |
| !!! | CAGGTGAGTTTGATCTTTTT+TGG | - | chr1_2:22162391-22162410 | Msa0062600:intron | 35.0% |
| !! | TTTTCTAGCCTTCTTTACCA+TGG | + | chr1_2:22162748-22162767 | None:intergenic | 35.0% |
| CATTAACAGCTTCAGATCTT+AGG | + | chr1_2:22162773-22162792 | None:intergenic | 35.0% | |
| ! | GTATCCACTGTTTCAAGTAA+TGG | + | chr1_2:22162910-22162929 | None:intergenic | 35.0% |
| !! | CAATAAGGGTTGGTAATGAA+AGG | - | chr1_2:22162978-22162997 | Msa0062600:CDS | 35.0% |
| TATAAAAAAGGGGTCTCTTG+TGG | - | chr1_2:22163300-22163319 | Msa0062600:intron | 35.0% | |
| GTTGTAAAGAAGCAAGACAT+TGG | - | chr1_2:22163330-22163349 | Msa0062600:intron | 35.0% | |
| !! | CAATACCCTTTACTTTTGGA+TGG | + | chr1_2:22163371-22163390 | None:intergenic | 35.0% |
| ! | AGAGCAATACCCTTTACTTT+TGG | + | chr1_2:22163375-22163394 | None:intergenic | 35.0% |
| TGAAAATGGGGAGAAAATCA+TGG | - | chr1_2:22164085-22164104 | Msa0062600:intron | 35.0% | |
| AAAGAATGCAAAGTGGAGAT+TGG | - | chr1_2:22164177-22164196 | Msa0062600:intron | 35.0% | |
| AAATACCTTGAAACTGCTCC+AGG | + | chr1_2:22160629-22160648 | None:intergenic | 40.0% | |
| CATTGTGAGCTCATGTGAAA+TGG | - | chr1_2:22161298-22161317 | Msa0062600:intron | 40.0% | |
| !! | TGGTGTTACTACTTTGGTGT+TGG | + | chr1_2:22161492-22161511 | None:intergenic | 40.0% |
| TTTCTCTACATGACCTGTAC+TGG | - | chr1_2:22161538-22161557 | Msa0062600:intron | 40.0% | |
| !! | AGTGAGTGAGTATTGAGCTA+AGG | + | chr1_2:22161681-22161700 | None:intergenic | 40.0% |
| GAGGGTTCCAAAGAAATATG+TGG | - | chr1_2:22161915-22161934 | Msa0062600:CDS | 40.0% | |
| CAACACCGTTAGGAAACTTA+AGG | + | chr1_2:22161975-22161994 | None:intergenic | 40.0% | |
| GAGTAATGAGAGTTCAGATG+AGG | - | chr1_2:22162317-22162336 | Msa0062600:intron | 40.0% | |
| CAAACTCAAAGGACCAGAAA+TGG | - | chr1_2:22162354-22162373 | Msa0062600:intron | 40.0% | |
| AGTTAATGCCTAAACTTGGC+AGG | - | chr1_2:22162708-22162727 | Msa0062600:CDS | 40.0% | |
| TGTTACTACCTGCCAAGTTT+AGG | + | chr1_2:22162719-22162738 | None:intergenic | 40.0% | |
| ATGTCACAATCTTACGCCAA+TGG | - | chr1_2:22162816-22162835 | Msa0062600:CDS | 40.0% | |
| GGAACTACAACAATAAGGGT+TGG | - | chr1_2:22162968-22162987 | Msa0062600:CDS | 40.0% | |
| !! | AATATTGTATGGGTGGTGGA+TGG | - | chr1_2:22163041-22163060 | Msa0062600:CDS | 40.0% |
| !! | GTGGTGGATGGAAAATATTC+AGG | - | chr1_2:22163053-22163072 | Msa0062600:CDS | 40.0% |
| !!! | CTTTGGCTTTGGTTCGTTTT+TGG | + | chr1_2:22163167-22163186 | None:intergenic | 40.0% |
| ! | CCTAGTGATTTCTTTGGCTT+TGG | + | chr1_2:22163178-22163197 | None:intergenic | 40.0% |
| CCAAAGCCAAAGAAATCACT+AGG | - | chr1_2:22163175-22163194 | Msa0062600:intron | 40.0% | |
| GTAAAGAAGCAAGACATTGG+AGG | - | chr1_2:22163333-22163352 | Msa0062600:intron | 40.0% | |
| AAGACATTGGAGGAACATCT+AGG | - | chr1_2:22163343-22163362 | Msa0062600:intron | 40.0% | |
| TAGGAGCCATCCAAAAGTAA+AGG | - | chr1_2:22163362-22163381 | Msa0062600:intron | 40.0% | |
| AGGAGCCATCCAAAAGTAAA+GGG | - | chr1_2:22163363-22163382 | Msa0062600:intron | 40.0% | |
| TGTGTTTATGCATGTCCAGA+AGG | - | chr1_2:22163766-22163785 | Msa0062600:intron | 40.0% | |
| TTTCGTGAAGAACAAAACCC+CGG | - | chr1_2:22163822-22163841 | Msa0062600:intron | 40.0% | |
| GTGTCCACCTTATACATTAG+AGG | + | chr1_2:22163975-22163994 | None:intergenic | 40.0% | |
| AGTCTTTGTGGCTGTAAGTT+CGG | - | chr1_2:22164132-22164151 | Msa0062600:intron | 40.0% | |
| ! | CCTTAAAGAAGCACAGCTAA+TGG | + | chr1_2:22164273-22164292 | None:intergenic | 40.0% |
| CCATTAGCTGTGCTTCTTTA+AGG | - | chr1_2:22164270-22164289 | Msa0062600:intron | 40.0% | |
| AGGCTGACACAATACTTCTT+AGG | + | chr1_2:22164402-22164421 | None:intergenic | 40.0% | |
| !! | AGAAGTATTGTGTCAGCCTT+TGG | - | chr1_2:22164403-22164422 | Msa0062600:intron | 40.0% |
| ! | CAGGAACATAACTTGCAAGC+TGG | - | chr1_2:22160522-22160541 | Msa0062600:three_prime_UTR | 45.0% |
| TGTATGCAGTGTGAGACTGT+TGG | - | chr1_2:22161383-22161402 | Msa0062600:intron | 45.0% | |
| AGCTAAGGCTTAGAGAAGTG+AGG | + | chr1_2:22161666-22161685 | None:intergenic | 45.0% | |
| GATGAGGAAGCCATTGAAGA+AGG | - | chr1_2:22162276-22162295 | Msa0062600:intron | 45.0% | |
| ! | CTGGTCCTTTGAGTTTGCTT+TGG | + | chr1_2:22162351-22162370 | None:intergenic | 45.0% |
| CTTGGCAGGTAGTAACAAAG+TGG | - | chr1_2:22162722-22162741 | Msa0062600:CDS | 45.0% | |
| AGGTAGTAACAAAGTGGCCA+TGG | - | chr1_2:22162728-22162747 | Msa0062600:CDS | 45.0% | |
| CAAAGTGGCCATGGTAAAGA+AGG | - | chr1_2:22162737-22162756 | Msa0062600:CDS | 45.0% | |
| !! | GGTTGGTAATGAAAGGAGTG+TGG | - | chr1_2:22162985-22163004 | Msa0062600:CDS | 45.0% |
| ! | GAAGGAGCACAAGACATTCA+AGG | - | chr1_2:22163798-22163817 | Msa0062600:intron | 45.0% |
| GTATCTGCAGTGTGTACCAA+AGG | - | chr1_2:22164032-22164051 | Msa0062600:intron | 45.0% | |
| TGTGGCTGTAAGTTCGGTAA+AGG | - | chr1_2:22164138-22164157 | Msa0062600:intron | 45.0% | |
| GCTGTAAGTTCGGTAAAGGT+TGG | - | chr1_2:22164142-22164161 | Msa0062600:intron | 45.0% | |
| !! | TGCTTTGCCCTTTAAAGTGC+TGG | - | chr1_2:22164312-22164331 | Msa0062600:intron | 45.0% |
| !! | AAAAATAATAAATACTTAAT+TGG | - | chr1_2:22162635-22162654 | Msa0062600:CDS | 5.0% |
| !! | ATTATATATATTTCTTAATT+TGG | - | chr1_2:22163473-22163492 | Msa0062600:intron | 5.0% |
| TGGTTGGAAGTCGTTTGTGC+AGG | - | chr1_2:22160503-22160522 | Msa0062600:three_prime_UTR | 50.0% | |
| GGCATGGTTCCTTTGTAGCT+GGG | + | chr1_2:22160608-22160627 | None:intergenic | 50.0% | |
| AGGCATGGTTCCTTTGTAGC+TGG | + | chr1_2:22160609-22160628 | None:intergenic | 50.0% | |
| AGCTACAAAGGAACCATGCC+TGG | - | chr1_2:22160608-22160627 | Msa0062600:three_prime_UTR | 50.0% | |
| ! | GGTGCTGAAGACACAGAAGA+AGG | - | chr1_2:22162186-22162205 | Msa0062600:CDS | 50.0% |
| TCCAGAAGGTCGTGATGTGA+AGG | - | chr1_2:22163780-22163799 | Msa0062600:intron | 50.0% | |
| TCCTTCACATCACGACCTTC+TGG | + | chr1_2:22163784-22163803 | None:intergenic | 50.0% | |
| CCTTGAAACTGCTCCAGGCA+TGG | + | chr1_2:22160624-22160643 | None:intergenic | 55.0% | |
| CCATGCCTGGAGCAGTTTCA+AGG | - | chr1_2:22160621-22160640 | Msa0062600:three_prime_UTR | 55.0% | |
| GGAGTGTGGAAGTGAGTGTG+AGG | - | chr1_2:22162999-22163018 | Msa0062600:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 22160495 | 22164507 | 22160495 | ID=Msa0062600;Name=Msa0062600 |
| chr1_2 | mRNA | 22160495 | 22164507 | 22160495 | ID=Msa0062600-mRNA-1;Parent=Msa0062600;Name=Msa0062600-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.42|1|1|1|7|217|439 |
| chr1_2 | exon | 22160495 | 22160960 | 22160495 | ID=Msa0062600-mRNA-1:exon:8214;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22161159 | 22161217 | 22161159 | ID=Msa0062600-mRNA-1:exon:8213;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22161618 | 22161704 | 22161618 | ID=Msa0062600-mRNA-1:exon:8212;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22161806 | 22162079 | 22161806 | ID=Msa0062600-mRNA-1:exon:8211;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22162154 | 22162272 | 22162154 | ID=Msa0062600-mRNA-1:exon:8210;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22162609 | 22163086 | 22162609 | ID=Msa0062600-mRNA-1:exon:8209;Parent=Msa0062600-mRNA-1 |
| chr1_2 | exon | 22164454 | 22164507 | 22164454 | ID=Msa0062600-mRNA-1:exon:8208;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22164454 | 22164507 | 22164454 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22162609 | 22163086 | 22162609 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22162154 | 22162272 | 22162154 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22161806 | 22162079 | 22161806 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22161618 | 22161704 | 22161618 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22161159 | 22161217 | 22161159 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | CDS | 22160712 | 22160960 | 22160712 | ID=Msa0062600-mRNA-1:cds;Parent=Msa0062600-mRNA-1 |
| chr1_2 | three_prime_UTR | 22160495 | 22160711 | 22160495 | ID=Msa0062600-mRNA-1:three_prime_utr;Parent=Msa0062600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
