AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204090 MtrunA17_Chr4g0053181 95.793 523 15 4 1 518 1 521 0.0 1030
Msa1204090 MtrunA17_Chr5g0401891 69.669 544 106 20 1 518 1 511 0.0 595
Msa1204090 MtrunA17_Chr7g0263581 78.261 207 43 1 143 349 110 314 1.80e-95 298
Msa1204090 MtrunA17_Chr4g0030191 56.782 317 96 6 40 355 36 312 6.93e-93 291
Msa1204090 MtrunA17_Chr2g0325911 53.822 314 103 7 40 352 25 297 6.89e-82 262
Msa1204090 MtrunA17_Chr4g0054351 54.971 171 66 3 169 328 310 480 1.16e-52 189
Msa1204090 MtrunA17_Chr4g0054351 41.758 91 50 2 159 246 402 492 2.15e-11 66.6
Msa1204090 MtrunA17_Chr5g0400871 54.386 171 67 3 169 328 249 419 1.73e-51 184
Msa1204090 MtrunA17_Chr4g0072291 55.030 169 65 3 169 326 159 327 2.89e-51 182
Msa1204090 MtrunA17_Chr7g0216601 52.976 168 68 2 169 325 65 232 1.28e-50 178
Msa1204090 MtrunA17_Chr4g0032631 43.277 238 105 6 169 386 163 390 5.62e-50 179
Msa1204090 MtrunA17_Chr7g0249621 53.846 169 67 3 169 326 259 427 1.46e-49 181
Msa1204090 MtrunA17_Chr3g0135161 54.167 168 69 3 169 328 310 477 3.11e-49 179
Msa1204090 MtrunA17_Chr8g0355191 47.418 213 90 5 145 339 32 240 3.96e-48 172
Msa1204090 MtrunA17_Chr3g0126151 80.851 94 18 0 210 303 47 140 4.29e-48 163
Msa1204090 MtrunA17_Chr8g0343851 50.538 186 83 4 150 326 228 413 5.12e-48 175
Msa1204090 MtrunA17_Chr1g0170761 43.218 317 122 13 39 349 34 298 7.39e-48 170
Msa1204090 MtrunA17_Chr1g0152161 52.976 168 71 3 169 328 312 479 1.11e-47 175
Msa1204090 MtrunA17_Chr4g0002011 49.519 208 84 4 163 349 30 237 3.99e-47 166
Msa1204090 MtrunA17_Chr6g0452911 47.396 192 83 4 173 346 65 256 7.88e-47 167
Msa1204090 MtrunA17_Chr2g0328971 46.078 204 86 5 169 361 167 357 4.47e-46 168
Msa1204090 MtrunA17_Chr4g0073521 50.000 174 73 4 163 325 41 211 1.72e-45 163
Msa1204090 MtrunA17_Chr8g0355181 46.829 205 95 3 150 340 37 241 2.58e-44 160
Msa1204090 MtrunA17_Chr5g0412151 53.801 171 68 3 169 328 224 394 4.87e-43 160
Msa1204090 MtrunA17_Chr8g0367311 44.330 194 102 2 196 388 19 207 8.80e-43 152
Msa1204090 MtrunA17_Chr8g0362541 37.671 292 135 8 169 422 69 351 1.09e-38 146
Msa1204090 MtrunA17_Chr7g0257361 49.231 130 52 2 169 288 57 182 1.52e-24 105
Msa1204090 MtrunA17_Chr2g0305821 44.800 125 57 3 159 271 32 156 1.53e-18 82.8
Msa1204090 MtrunA17_Chr2g0305831 60.000 55 22 0 271 325 5 59 7.64e-14 70.9
Msa1204090 MtrunA17_Chr8g0375031 46.914 81 38 3 172 248 124 203 3.17e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204090 AT4G36920.1 52.809 534 134 18 1 518 1 432 6.84e-130 385
Msa1204090 AT4G36920.2 52.809 534 134 18 1 518 1 432 6.84e-130 385
Msa1204090 AT5G67180.1 69.202 263 56 3 92 354 39 276 3.85e-102 311
Msa1204090 AT5G67180.2 69.466 262 55 3 93 354 40 276 4.18e-102 309
Msa1204090 AT5G67180.3 71.610 236 44 2 93 328 40 252 8.76e-96 292
Msa1204090 AT2G28550.3 53.693 352 137 7 43 390 40 369 3.75e-92 289
Msa1204090 AT5G67180.4 69.545 220 42 4 92 311 39 233 8.17e-78 245
Msa1204090 AT2G28550.1 50.000 352 135 8 43 390 40 354 3.40e-77 250
Msa1204090 AT2G28550.4 67.606 213 51 4 94 302 85 283 2.45e-76 244
Msa1204090 AT2G28550.2 57.028 249 83 6 43 287 40 268 6.55e-66 214
Msa1204090 AT2G28550.6 57.028 249 83 6 43 287 40 268 6.55e-66 214
Msa1204090 AT5G60120.4 61.111 198 54 2 156 353 144 318 4.59e-63 211
Msa1204090 AT5G60120.3 61.111 198 54 2 156 353 144 318 4.59e-63 211
Msa1204090 AT5G60120.5 61.111 198 54 2 156 353 144 318 4.59e-63 211
Msa1204090 AT5G60120.6 61.111 198 54 2 156 353 144 318 1.85e-62 212
Msa1204090 AT5G60120.1 61.111 198 54 2 156 353 144 318 2.46e-62 212
Msa1204090 AT5G60120.2 61.111 198 54 2 156 353 144 318 6.08e-62 211
Msa1204090 AT2G28550.5 57.426 202 69 2 189 390 4 188 1.72e-55 187
Msa1204090 AT5G57390.2 41.860 301 131 9 150 410 63 359 9.73e-55 190
Msa1204090 AT5G57390.1 41.860 301 131 9 150 410 181 477 7.86e-54 191
Msa1204090 AT1G72570.1 53.254 169 68 3 169 326 220 388 3.70e-51 180
Msa1204090 AT4G37750.1 53.254 169 68 2 169 326 280 448 1.87e-50 181
Msa1204090 AT4G37750.1 44.304 79 42 1 159 235 372 450 4.35e-11 65.9
Msa1204090 AT1G51190.1 53.846 169 67 3 169 326 187 355 2.27e-50 181
Msa1204090 AT3G20840.1 52.663 169 69 3 169 326 178 346 4.76e-49 178
Msa1204090 AT5G17430.2 50.562 178 77 3 160 326 136 313 5.13e-48 174
Msa1204090 AT5G17430.1 50.562 178 77 3 160 326 198 375 7.78e-48 175
Msa1204090 AT2G39250.2 76.636 107 25 0 160 266 96 202 3.35e-47 164
Msa1204090 AT2G39250.1 52.020 198 63 4 160 356 96 262 1.13e-46 166
Msa1204090 AT5G65510.4 51.546 194 80 5 169 348 170 363 2.60e-44 162
Msa1204090 AT5G65510.2 51.546 194 80 5 169 348 228 421 4.30e-44 163
Msa1204090 AT5G65510.1 51.546 194 80 5 169 348 228 421 4.30e-44 163
Msa1204090 AT3G54320.3 53.488 172 69 2 169 329 62 233 8.35e-44 160
Msa1204090 AT3G54320.1 53.488 172 69 2 169 329 62 233 9.37e-44 160
Msa1204090 AT3G54990.2 72.000 125 35 0 154 278 104 228 3.04e-43 154
Msa1204090 AT5G10510.7 50.739 203 84 6 169 356 227 428 3.88e-43 161
Msa1204090 AT5G10510.5 50.739 203 84 6 169 356 227 428 3.88e-43 161
Msa1204090 AT5G10510.6 50.739 203 84 6 169 356 265 466 7.01e-43 161
Msa1204090 AT5G10510.4 50.739 203 84 6 169 356 265 466 7.01e-43 161
Msa1204090 AT5G10510.1 50.739 203 84 6 169 356 250 451 7.07e-43 160
Msa1204090 AT3G54990.1 62.893 159 45 2 154 312 104 248 7.65e-43 156
Msa1204090 AT1G79700.2 53.409 176 71 2 163 327 43 218 6.40e-39 144
Msa1204090 AT5G10510.2 49.261 203 84 7 169 356 227 425 7.28e-39 149
Msa1204090 AT5G65510.3 51.825 137 55 3 169 294 170 306 2.51e-38 142
Msa1204090 AT1G16060.1 53.039 181 70 3 156 325 46 222 1.59e-37 141
Msa1204090 AT5G10510.3 44.843 223 87 7 169 356 265 486 3.19e-36 142
Msa1204090 AT3G54320.4 54.074 135 61 1 196 329 33 167 4.76e-32 127
Msa1204090 AT3G54320.5 54.074 135 61 1 196 329 33 167 4.76e-32 127
Msa1204090 AT1G79700.1 50.568 176 66 3 163 327 43 208 7.68e-32 124
Msa1204090 AT1G79700.3 54.348 138 62 1 191 327 5 142 1.26e-27 111
Msa1204090 AT1G16060.3 55.147 136 60 1 191 325 17 152 9.05e-27 110
Msa1204090 AT1G79700.4 54.198 131 59 1 198 327 6 136 1.93e-25 105
Msa1204090 AT2G41710.1 49.231 130 52 2 169 288 67 192 2.22e-24 105
Msa1204090 AT2G41710.4 49.231 130 52 2 169 288 67 192 3.38e-24 105
Msa1204090 AT2G41710.2 47.407 135 52 3 169 288 67 197 3.36e-22 99.4
Msa1204090 AT3G54320.2 58.696 92 37 1 239 329 1 92 8.05e-20 90.1
Msa1204090 AT2G41710.3 46.667 120 50 2 179 288 112 227 1.91e-19 91.7
Msa1204090 AT1G16060.2 57.955 88 36 1 239 325 1 88 8.59e-18 82.4
Msa1204090 AT1G16060.4 57.955 88 36 1 239 325 1 88 8.59e-18 82.4
Msa1204090 AT1G16060.6 57.955 88 36 1 239 325 1 88 8.59e-18 82.4
Msa1204090 AT1G16060.5 57.955 88 36 1 239 325 1 88 8.59e-18 82.4
Msa1204090 AT1G03800.1 41.071 112 55 4 264 366 52 161 3.69e-11 63.9
Msa1204090 AT2G47520.1 44.444 90 45 3 150 235 25 113 7.22e-11 61.6

Find 119 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTCTATTATATGGTTT+TGG 0.153032 8_1:+59560102 None:intergenic
TGAATGTAAAACGGTTAAAT+AGG 0.159103 8_1:+59559173 None:intergenic
ATTCACTAGGTACGTTTATC+TGG 0.170714 8_1:-59560716 Msa1204090:intron
ACTTTGTTTCTTTGGTTCTT+TGG 0.170788 8_1:+59562185 None:intergenic
CTAATAAAATTAACAAAATA+AGG 0.176102 8_1:+59559117 None:intergenic
GAACCAAAACTTTGTTTCTT+TGG 0.177683 8_1:+59562177 None:intergenic
AAAAGAAACAGTAAGATATT+TGG 0.204737 8_1:-59561893 Msa1204090:CDS
CACAATTTGGATTTAAGTTT+GGG 0.236642 8_1:-59560342 Msa1204090:CDS
ATATTGTTTGGTCTATTATA+TGG 0.284756 8_1:+59560096 None:intergenic
TAATGCTGGTGATCACAATT+TGG 0.288302 8_1:-59560355 Msa1204090:CDS
TCACAATTTGGATTTAAGTT+TGG 0.292491 8_1:-59560343 Msa1204090:CDS
GGAACTCATTAGTCTTAGTT+TGG 0.294208 8_1:-59559030 Msa1204090:three_prime_UTR
CCATATGCTTCCATATTGTT+TGG 0.297515 8_1:+59560084 None:intergenic
AATTTGAATGCAATGTTAGA+AGG 0.303144 8_1:-59559086 Msa1204090:three_prime_UTR
CAAGCTTGGCAGCACATAAA+TGG 0.312102 8_1:-59559226 Msa1204090:CDS
AGAGTACCCACATGAAAATT+TGG 0.316290 8_1:+59559919 None:intergenic
ATGCATCTGATCAATCTAAT+TGG 0.325045 8_1:-59560278 Msa1204090:CDS
GAGATGAAGATAAAGCAAAA+AGG 0.330561 8_1:-59562012 Msa1204090:CDS
GAACCAAAGAAACAAAGTTT+TGG 0.339964 8_1:-59562180 Msa1204090:five_prime_UTR
TCGGCTAACATTGCTGAAAC+TGG 0.340167 8_1:-59562437 Msa1204090:five_prime_UTR
GAATGTAAAACGGTTAAATA+GGG 0.340722 8_1:+59559174 None:intergenic
AGAGAGAGTGAATGGTGTTA+AGG 0.343459 8_1:-59562476 Msa1204090:five_prime_UTR
AAGGTAAAAGAAGGTGATTT+TGG 0.344206 8_1:+59562214 None:intergenic
ATTTGTGACTGATCTCTAAA+AGG 0.350712 8_1:+59559970 None:intergenic
GACAACGAGCTTAATAATTC+TGG 0.352333 8_1:-59560500 Msa1204090:intron
AGAGCAGCTATTAAGTTTAG+AGG 0.357329 8_1:-59561097 Msa1204090:CDS
ATATATGCTTGGATCAAAAT+TGG 0.369931 8_1:+59560523 None:intergenic
TGATCACCAGCATTACTTGC+TGG 0.378574 8_1:+59560363 None:intergenic
TTTGCTTGAGTATCATTGAT+AGG 0.379424 8_1:+59560303 None:intergenic
CAACAACAACAATGGCAATC+AGG 0.383189 8_1:-59559322 Msa1204090:CDS
GCATCTTCATGTGGTGGAAA+TGG 0.384567 8_1:-59561761 Msa1204090:CDS
GTCGATGGGAATCACATATA+TGG 0.385048 8_1:-59561544 Msa1204090:intron
TGGCCTCGTCTATACTGTAT+TGG 0.390152 8_1:-59562417 Msa1204090:five_prime_UTR
ATATAATAGACCAAACAATA+TGG 0.404545 8_1:-59560094 Msa1204090:CDS
GGATCAAGAGTCTGATGATA+TGG 0.408466 8_1:-59561789 Msa1204090:CDS
ACTGCTGCTGCAGCATCATC+AGG 0.408622 8_1:-59559283 Msa1204090:CDS
AGGTGAAGTTGAGATGCTTT+CGG 0.421973 8_1:-59562456 Msa1204090:five_prime_UTR
ATGATTATTTGAATGTAAAA+CGG 0.424534 8_1:+59559164 None:intergenic
CCAAACAATATGGAAGCATA+TGG 0.430711 8_1:-59560084 Msa1204090:CDS
TGGAAGATGGGAGGCAAGAA+TGG 0.436163 8_1:-59560820 Msa1204090:CDS
ATCAATCTAATTGGCAGCAT+GGG 0.439853 8_1:-59560269 Msa1204090:CDS
TGCAACACCTACCTCTTCAC+TGG 0.441140 8_1:-59562347 Msa1204090:five_prime_UTR
TAATAAAATTAACAAAATAA+GGG 0.447370 8_1:+59559118 None:intergenic
GGCCTCGTCTATACTGTATT+GGG 0.447593 8_1:-59562416 Msa1204090:five_prime_UTR
CACCCTCTTCTTCTCAAGCT+TGG 0.454258 8_1:-59559240 Msa1204090:CDS
TTCACTAGGTACGTTTATCT+GGG 0.456768 8_1:-59560715 Msa1204090:intron
CCTACCTCTTCACTGGTCCT+AGG 0.457383 8_1:-59562340 Msa1204090:five_prime_UTR
TCGGCTTCCATAGCTGCTGC+TGG 0.457470 8_1:+59559384 None:intergenic
CTATATTTAGAGCTTCCTCT+TGG 0.461670 8_1:+59560864 None:intergenic
GAGTAGTTGTCAAGTGAAAG+AGG 0.464682 8_1:+59562276 None:intergenic
AGCTCGTTGTCATATATGCT+TGG 0.465069 8_1:+59560512 None:intergenic
GAAGAGGGTGGTCTAATTTG+AGG 0.465254 8_1:+59559253 None:intergenic
TAGTTTCCCAGCAGCAGCTA+TGG 0.477925 8_1:-59559391 Msa1204090:CDS
TATTGTGAACTTCTTGACCT+TGG 0.482190 8_1:+59561596 None:intergenic
TGTGGAAAACAAGTGTATCT+TGG 0.489731 8_1:-59561409 Msa1204090:intron
TTTCCTCGTGCTCATTGGGT+AGG 0.490632 8_1:-59561716 Msa1204090:CDS
AATAAAATGCAATGGTAAAG+AGG 0.502814 8_1:-59560552 Msa1204090:CDS
CATTGCACAAATGTGGAAGA+TGG 0.503002 8_1:-59560833 Msa1204090:CDS
AAAGAGGTTGAGTGTGATGA+TGG 0.507642 8_1:+59562292 None:intergenic
ATTTGAATGCAATGTTAGAA+GGG 0.507815 8_1:-59559085 Msa1204090:three_prime_UTR
CATTTGATGATGAAGAATGA+AGG 0.508677 8_1:+59560010 None:intergenic
GCAGAACCAGCAAGTAATGC+TGG 0.511395 8_1:-59560369 Msa1204090:CDS
AGCAGCTATGGAAGCCGAGT+TGG 0.511638 8_1:-59559379 Msa1204090:CDS
TCAAGAAGTTCACAATATAG+AGG 0.514827 8_1:-59561590 Msa1204090:CDS
TCTCATAATTGCAGGGATTG+TGG 0.516374 8_1:-59561427 Msa1204090:intron
AACAACAACAATGGCAATCA+GGG 0.519302 8_1:-59559321 Msa1204090:CDS
TCATCAGACTCTTGATCCAT+AGG 0.519737 8_1:+59561794 None:intergenic
TATTAAGTTTAGAGGAGTTG+AGG 0.523900 8_1:-59561089 Msa1204090:CDS
GGATGTTCTTCACTCAAAGA+TGG 0.534996 8_1:-59562034 Msa1204090:CDS
GGATGAGTCAAACTAACAAA+CGG 0.538684 8_1:-59559009 Msa1204090:three_prime_UTR
TTTACAGAAGAACAGGTCGA+TGG 0.544216 8_1:-59561559 Msa1204090:CDS
GATCAATCTAATTGGCAGCA+TGG 0.545229 8_1:-59560270 Msa1204090:CDS
AGAGGAAGCTCTAAATATAG+AGG 0.546165 8_1:-59560861 Msa1204090:CDS
CGGCTTCCATAGCTGCTGCT+GGG 0.549582 8_1:+59559385 None:intergenic
ACGGTTAAATAGGGATCAAG+AGG 0.556646 8_1:+59559183 None:intergenic
GGAAGATGGGAGGCAAGAAT+GGG 0.561290 8_1:-59560819 Msa1204090:CDS
ATTGCTATCACACACACTCA+TGG 0.562176 8_1:-59558903 Msa1204090:three_prime_UTR
TTATGAAGAAGACTTGAAGC+AGG 0.563759 8_1:-59561041 Msa1204090:intron
GAGGGTGGTCTAATTTGAGG+TGG 0.565751 8_1:+59559256 None:intergenic
ATTGCACAAATGTGGAAGAT+GGG 0.567084 8_1:-59560832 Msa1204090:CDS
GTACTTCGTCGACAAAGCAC+TGG 0.569473 8_1:-59560891 Msa1204090:CDS
TTACAGAAGAACAGGTCGAT+GGG 0.572290 8_1:-59561558 Msa1204090:CDS
ACAATATGGAAGCATATGGA+AGG 0.574740 8_1:-59560080 Msa1204090:CDS
GGTGTTACATTGCACAAATG+TGG 0.575043 8_1:-59560840 Msa1204090:CDS
AGGGTGGTCTAATTTGAGGT+GGG 0.578261 8_1:+59559257 None:intergenic
TGTCAATCAGAAACACTTGG+AGG 0.580345 8_1:-59561683 Msa1204090:CDS
CCTATGAAGAAAAGTAGAAG+AGG 0.584545 8_1:-59561620 Msa1204090:CDS
TCAATCTAATTGGCAGCATG+GGG 0.594017 8_1:-59560268 Msa1204090:CDS
AAGAGGTTGAGTGTGATGAT+GGG 0.598585 8_1:+59562293 None:intergenic
ACACTGAGGTTGAAGCTGCA+AGG 0.600079 8_1:-59560684 Msa1204090:intron
ATGAAAGATCACTTCCAACT+CGG 0.600183 8_1:+59559365 None:intergenic
AAAGCAGCAATAAAATGCAA+TGG 0.607563 8_1:-59560560 Msa1204090:CDS
TCTGGGCTTGTTTGACACTG+AGG 0.608889 8_1:-59560698 Msa1204090:CDS
GTTATAGCATCTTCATGTGG+TGG 0.609279 8_1:-59561767 Msa1204090:CDS
ACACAGCACATGCAGCTGCT+CGG 0.611926 8_1:-59561213 Msa1204090:intron
CTGCCAAGCTTGAGAAGAAG+AGG 0.614697 8_1:+59559237 None:intergenic
GCATATGGAAGGGATTTGCA+TGG 0.618990 8_1:-59560069 Msa1204090:CDS
CAATATGGAAGCATATGGAA+GGG 0.623025 8_1:-59560079 Msa1204090:CDS
GCTTGGATCAAAATTGGTGA+CGG 0.623409 8_1:+59560529 None:intergenic
AAGAGGGTCTCATGAGATTG+CGG 0.624464 8_1:+59559200 None:intergenic
GCAGCAGTTGCTAAATAATG+TGG 0.624566 8_1:+59559298 None:intergenic
ATCATCATCAACAACAACAA+TGG 0.626378 8_1:-59559330 Msa1204090:CDS
ATGTTAGAAGGGATAGCAAG+AGG 0.630113 8_1:-59559074 Msa1204090:three_prime_UTR
CAAACCTAGGACCAGTGAAG+AGG 0.630498 8_1:+59562336 None:intergenic
GTACCCACATGAAAATTTGG+TGG 0.636697 8_1:+59559922 None:intergenic
TACCCACATGAAAATTTGGT+GGG 0.637961 8_1:+59559923 None:intergenic
CTATGAAGAAAAGTAGAAGA+GGG 0.641615 8_1:-59561619 Msa1204090:CDS
AGAAAAGTAGAAGAGGGCCA+AGG 0.647064 8_1:-59561613 Msa1204090:CDS
GCACAAATGTGGAAGATGGG+AGG 0.665861 8_1:-59560829 Msa1204090:CDS
CCTAGGACCAGTGAAGAGGT+AGG 0.670118 8_1:+59562340 None:intergenic
ATGGAGAGAGTGAAGCATTG+AGG 0.677397 8_1:-59560050 Msa1204090:CDS
CAAGCTTGAGAAGAAGAGGG+TGG 0.678347 8_1:+59559241 None:intergenic
CGGTTAAATAGGGATCAAGA+GGG 0.690526 8_1:+59559184 None:intergenic
AGGGTCTCATGAGATTGCGG+AGG 0.691450 8_1:+59559203 None:intergenic
TGCCAAGCTTGAGAAGAAGA+GGG 0.692321 8_1:+59559238 None:intergenic
ACACCTACCCAATGAGCACG+AGG 0.695607 8_1:+59561713 None:intergenic
ATGGTTATAGCATCTTCATG+TGG 0.723044 8_1:-59561770 Msa1204090:CDS
CAATCTAATTGGCAGCATGG+GGG 0.724886 8_1:-59560267 Msa1204090:CDS
TGCCCAATACAGTATAGACG+AGG 0.734512 8_1:+59562414 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGAATCAAATTTTTTTTA+AGG + chr8_1:59559911-59559930 None:intergenic 10.0%
!!! AAAAAATTTGATTCTTTTTT+TGG - chr8_1:59559914-59559933 Msa1204090:intron 10.0%
!!! TTTATTTTATTTCATTTATG+GGG - chr8_1:59560216-59560235 Msa1204090:intron 10.0%
!!! TGAAATTGAATTAATTTTTT+TGG - chr8_1:59560414-59560433 Msa1204090:intron 10.0%
!!! TAGTTTTTTCAAAAATATAA+AGG - chr8_1:59561849-59561868 Msa1204090:CDS 10.0%
!! CTAATAAAATTAACAAAATA+AGG + chr8_1:59562265-59562284 None:intergenic 10.0%
!! AAAAACAAAAAATCTAAATT+GGG - chr8_1:59562328-59562347 Msa1204090:five_prime_UTR 10.0%
!!! TTTTAAGGTTTACATTTTTA+AGG + chr8_1:59559896-59559915 None:intergenic 15.0%
!!! GAATAATTGTTGTATTATTT+TGG - chr8_1:59560028-59560047 Msa1204090:CDS 15.0%
!!! GTTATAACATGATTAATTTT+AGG - chr8_1:59560746-59560765 Msa1204090:intron 15.0%
!! TTTAAATAATATTACACCTT+AGG + chr8_1:59561145-59561164 None:intergenic 15.0%
!! TTTATATTGACAATAAAAGT+GGG + chr8_1:59561532-59561551 None:intergenic 15.0%
!! ATTTATATTGACAATAAAAG+TGG + chr8_1:59561533-59561552 None:intergenic 15.0%
!!! TATGTAAGTACATTTTTTTT+TGG - chr8_1:59561959-59561978 Msa1204090:CDS 15.0%
!! ATGATTATTTGAATGTAAAA+CGG + chr8_1:59562218-59562237 None:intergenic 15.0%
!! GAAAAACAAAAAATCTAAAT+TGG - chr8_1:59562327-59562346 Msa1204090:five_prime_UTR 15.0%
!!! TATGATTCATTTTCTTAATT+TGG - chr8_1:59562447-59562466 Msa1204090:five_prime_UTR 15.0%
!!! TAGTTTTGCAAAAAAAAATG+TGG - chr8_1:59559271-59559290 Msa1204090:CDS 20.0%
!!! AGTTTTGCAAAAAAAAATGT+GGG - chr8_1:59559272-59559291 Msa1204090:CDS 20.0%
!! AAAAGAAACAGTAAGATATT+TGG - chr8_1:59559486-59559505 Msa1204090:intron 20.0%
!!! ATTTTTTTTTGCTTCTTTTG+TGG - chr8_1:59560054-59560073 Msa1204090:CDS 20.0%
!!! AATTATGATTTTCATTCACT+AGG - chr8_1:59560650-59560669 Msa1204090:intron 20.0%
!!! TAGATGTCATTTTTTACTAT+AGG - chr8_1:59560787-59560806 Msa1204090:intron 20.0%
!!! AGATGTCATTTTTTACTATA+GGG - chr8_1:59560788-59560807 Msa1204090:intron 20.0%
!!! AATTCTGGTATATTTTGTTA+TGG - chr8_1:59560894-59560913 Msa1204090:CDS 20.0%
!! ATATTGTTTGGTCTATTATA+TGG + chr8_1:59561286-59561305 None:intergenic 20.0%
!! ATATAATAGACCAAACAATA+TGG - chr8_1:59561285-59561304 Msa1204090:intron 20.0%
!!! ATTTTTTACTATTATGCATG+AGG + chr8_1:59561500-59561519 None:intergenic 20.0%
!!! ATTAGCATGATTTTAAATTG+TGG - chr8_1:59561553-59561572 Msa1204090:CDS 20.0%
!!! ACAAGAAGAAATTTTGAATA+TGG + chr8_1:59561926-59561945 None:intergenic 20.0%
!!! CAAAATAAGGGAAAATTTTA+GGG + chr8_1:59562252-59562271 None:intergenic 20.0%
!!! ACAAAATAAGGGAAAATTTT+AGG + chr8_1:59562253-59562272 None:intergenic 20.0%
! AAGAAGAAAAAATCAAACCT+AGG + chr8_1:59559059-59559078 None:intergenic 25.0%
!!! TTTGGTTGGTTAAGAATTTT+GGG + chr8_1:59559150-59559169 None:intergenic 25.0%
!!! TTTTGGTTGGTTAAGAATTT+TGG + chr8_1:59559151-59559170 None:intergenic 25.0%
! AAAAAAATGTGGGATCTTAA+TGG - chr8_1:59559282-59559301 Msa1204090:CDS 25.0%
!! TGATCTTCTTTTCTCTTAAA+AGG + chr8_1:59559312-59559331 None:intergenic 25.0%
! AGATGAAGATAAAGCAAAAA+GGG - chr8_1:59559368-59559387 Msa1204090:CDS 25.0%
!!! AGGTTTACATTTTTAAGGTA+AGG + chr8_1:59559891-59559910 None:intergenic 25.0%
!!! AGACAAGAGTTAAGATTTTT+TGG - chr8_1:59560095-59560114 Msa1204090:CDS 25.0%
! TTGTCTGGATAAATTTGTAT+AGG - chr8_1:59560135-59560154 Msa1204090:intron 25.0%
! AATAAAATGCAATGGTAAAG+AGG - chr8_1:59560827-59560846 Msa1204090:CDS 25.0%
! ATATATGCTTGGATCAAAAT+TGG + chr8_1:59560859-59560878 None:intergenic 25.0%
!! TCACAATTTGGATTTAAGTT+TGG - chr8_1:59561036-59561055 Msa1204090:intron 25.0%
!! CACAATTTGGATTTAAGTTT+GGG - chr8_1:59561037-59561056 Msa1204090:intron 25.0%
!! TTGGTCTATTATATGGTTTT+GGG + chr8_1:59561279-59561298 None:intergenic 25.0%
!! TTTGGTCTATTATATGGTTT+TGG + chr8_1:59561280-59561299 None:intergenic 25.0%
! CTTCAAAATTCTTTACATTG+TGG - chr8_1:59561673-59561692 Msa1204090:CDS 25.0%
!!! ATAACCATGGTTTTAAATTG+CGG - chr8_1:59561743-59561762 Msa1204090:CDS 25.0%
!!! ATTGCAATCATGGTTTTAAA+TGG + chr8_1:59561902-59561921 None:intergenic 25.0%
! GAATGTAAAACGGTTAAATA+GGG + chr8_1:59562208-59562227 None:intergenic 25.0%
! TGAATGTAAAACGGTTAAAT+AGG + chr8_1:59562209-59562228 None:intergenic 25.0%
! AATTTGAATGCAATGTTAGA+AGG - chr8_1:59562293-59562312 Msa1204090:five_prime_UTR 25.0%
! ATTTGAATGCAATGTTAGAA+GGG - chr8_1:59562294-59562313 Msa1204090:five_prime_UTR 25.0%
!!! TTCTTGCTTTTCTGTATTAT+TGG - chr8_1:59562420-59562439 Msa1204090:five_prime_UTR 25.0%
!! TAAAAGAAGGTGATTTTGGT+TGG + chr8_1:59559164-59559183 None:intergenic 30.0%
! AAGGTAAAAGAAGGTGATTT+TGG + chr8_1:59559168-59559187 None:intergenic 30.0%
!!! TGGTTTTGAAAGGTAAAAGA+AGG + chr8_1:59559177-59559196 None:intergenic 30.0%
!!! TTTGGTTCTTTGGTTTTGAA+AGG + chr8_1:59559187-59559206 None:intergenic 30.0%
!! ACTTTGTTTCTTTGGTTCTT+TGG + chr8_1:59559197-59559216 None:intergenic 30.0%
! GAACCAAAGAAACAAAGTTT+TGG - chr8_1:59559199-59559218 Msa1204090:CDS 30.0%
! GAACCAAAACTTTGTTTCTT+TGG + chr8_1:59559205-59559224 None:intergenic 30.0%
GAAGATCATGAAAAATCTGA+AGG - chr8_1:59559324-59559343 Msa1204090:CDS 30.0%
GAGATGAAGATAAAGCAAAA+AGG - chr8_1:59559367-59559386 Msa1204090:CDS 30.0%
! TTTTGTCAATCAGAAACACT+TGG - chr8_1:59559693-59559712 Msa1204090:intron 30.0%
CTATGAAGAAAAGTAGAAGA+GGG - chr8_1:59559760-59559779 Msa1204090:intron 30.0%
TCAAGAAGTTCACAATATAG+AGG - chr8_1:59559789-59559808 Msa1204090:intron 30.0%
!!! GTTACTTTTTACAGAAGAAC+AGG - chr8_1:59559813-59559832 Msa1204090:intron 30.0%
!! ACTGAATAGATTGTTTTGTC+TGG - chr8_1:59560120-59560139 Msa1204090:CDS 30.0%
TCTGGATAAATTTGTATAGG+TGG - chr8_1:59560138-59560157 Msa1204090:intron 30.0%
TATTAAGTTTAGAGGAGTTG+AGG - chr8_1:59560290-59560309 Msa1204090:CDS 30.0%
AAAATAGACAACGTAAGCAA+AGG + chr8_1:59560726-59560745 None:intergenic 30.0%
AAAGCAGCAATAAAATGCAA+TGG - chr8_1:59560819-59560838 Msa1204090:CDS 30.0%
TTTGCTTGAGTATCATTGAT+AGG + chr8_1:59561079-59561098 None:intergenic 30.0%
ATGCATCTGATCAATCTAAT+TGG - chr8_1:59561101-59561120 Msa1204090:CDS 30.0%
!! CATTTGATGATGAAGAATGA+AGG + chr8_1:59561372-59561391 None:intergenic 30.0%
ATTTGTGACTGATCTCTAAA+AGG + chr8_1:59561412-59561431 None:intergenic 30.0%
TAGCAATTGTAGTTGCAATA+TGG - chr8_1:59561641-59561660 Msa1204090:CDS 30.0%
ATGGTTATGGTACAAAATCA+TGG + chr8_1:59561731-59561750 None:intergenic 30.0%
! ATGATTTTGTACCATAACCA+TGG - chr8_1:59561730-59561749 Msa1204090:CDS 30.0%
! GCAATTTAAAACCATGGTTA+TGG + chr8_1:59561744-59561763 None:intergenic 30.0%
ACTACAAGACAAAAGATTTG+AGG - chr8_1:59561772-59561791 Msa1204090:CDS 30.0%
TTGTGATTGTAATTCTGTTG+TGG + chr8_1:59561801-59561820 None:intergenic 30.0%
ACAGAAAAATGTAGATGATG+CGG + chr8_1:59561830-59561849 None:intergenic 30.0%
TGAATATGGAATTGCAATCA+TGG + chr8_1:59561912-59561931 None:intergenic 30.0%
ATCATCATCAACAACAACAA+TGG - chr8_1:59562049-59562068 Msa1204090:CDS 30.0%
GAAGATAAAGCAAAAAGGGT+TGG - chr8_1:59559372-59559391 Msa1204090:CDS 35.0%
! AGGACAATTTTCACTGTCTA+AGG + chr8_1:59559547-59559566 None:intergenic 35.0%
!!! GACAAGACAGTTTTTTCCTA+TGG - chr8_1:59559569-59559588 Msa1204090:intron 35.0%
ATGGTTATAGCATCTTCATG+TGG - chr8_1:59559609-59559628 Msa1204090:intron 35.0%
!! CCTCTTCTACTTTTCTTCAT+AGG + chr8_1:59559762-59559781 None:intergenic 35.0%
CCTATGAAGAAAAGTAGAAG+AGG - chr8_1:59559759-59559778 Msa1204090:intron 35.0%
TATTGTGAACTTCTTGACCT+TGG + chr8_1:59559786-59559805 None:intergenic 35.0%
TTTGTGTCTCTCATAATTGC+AGG - chr8_1:59559944-59559963 Msa1204090:CDS 35.0%
TTGTGTCTCTCATAATTGCA+GGG - chr8_1:59559945-59559964 Msa1204090:CDS 35.0%
TGTGGAAAACAAGTGTATCT+TGG - chr8_1:59559970-59559989 Msa1204090:CDS 35.0%
!!! TTTTTTGCTTCTTTTGTGGC+TGG - chr8_1:59560058-59560077 Msa1204090:CDS 35.0%
AGAGCAGCTATTAAGTTTAG+AGG - chr8_1:59560282-59560301 Msa1204090:CDS 35.0%
TTATGAAGAAGACTTGAAGC+AGG - chr8_1:59560338-59560357 Msa1204090:CDS 35.0%
! CTATATTTAGAGCTTCCTCT+TGG + chr8_1:59560518-59560537 None:intergenic 35.0%
!! AGAGGAAGCTCTAAATATAG+AGG - chr8_1:59560518-59560537 Msa1204090:CDS 35.0%
ATTGCACAAATGTGGAAGAT+GGG - chr8_1:59560547-59560566 Msa1204090:CDS 35.0%
! GCAAGAATGGGACAATTTTT+AGG - chr8_1:59560572-59560591 Msa1204090:CDS 35.0%
ATTCACTAGGTACGTTTATC+TGG - chr8_1:59560663-59560682 Msa1204090:intron 35.0%
TTCACTAGGTACGTTTATCT+GGG - chr8_1:59560664-59560683 Msa1204090:intron 35.0%
GACAACGAGCTTAATAATTC+TGG - chr8_1:59560879-59560898 Msa1204090:CDS 35.0%
TAATGCTGGTGATCACAATT+TGG - chr8_1:59561024-59561043 Msa1204090:intron 35.0%
ATCAATCTAATTGGCAGCAT+GGG - chr8_1:59561110-59561129 Msa1204090:CDS 35.0%
CCATATGCTTCCATATTGTT+TGG + chr8_1:59561298-59561317 None:intergenic 35.0%
! CCAAACAATATGGAAGCATA+TGG - chr8_1:59561295-59561314 Msa1204090:intron 35.0%
! ACAATATGGAAGCATATGGA+AGG - chr8_1:59561299-59561318 Msa1204090:intron 35.0%
! CAATATGGAAGCATATGGAA+GGG - chr8_1:59561300-59561319 Msa1204090:intron 35.0%
TACCCACATGAAAATTTGGT+GGG + chr8_1:59561459-59561478 None:intergenic 35.0%
! AGAGTACCCACATGAAAATT+TGG + chr8_1:59561463-59561482 None:intergenic 35.0%
ATGAAAGATCACTTCCAACT+CGG + chr8_1:59562017-59562036 None:intergenic 35.0%
AACAACAACAATGGCAATCA+GGG - chr8_1:59562058-59562077 Msa1204090:CDS 35.0%
!! GGAACTCATTAGTCTTAGTT+TGG - chr8_1:59562349-59562368 Msa1204090:five_prime_UTR 35.0%
GGATGAGTCAAACTAACAAA+CGG - chr8_1:59562370-59562389 Msa1204090:five_prime_UTR 35.0%
! AGAGAGAGTGAATGGTGTTA+AGG - chr8_1:59558903-59558922 Msa1204090:three_prime_UTR 40.0%
AGGTGAAGTTGAGATGCTTT+CGG - chr8_1:59558923-59558942 Msa1204090:three_prime_UTR 40.0%
AAGAGGTTGAGTGTGATGAT+GGG + chr8_1:59559089-59559108 None:intergenic 40.0%
AAAGAGGTTGAGTGTGATGA+TGG + chr8_1:59559090-59559109 None:intergenic 40.0%
GAGTAGTTGTCAAGTGAAAG+AGG + chr8_1:59559106-59559125 None:intergenic 40.0%
GGATGTTCTTCACTCAAAGA+TGG - chr8_1:59559345-59559364 Msa1204090:CDS 40.0%
GATAAAGCAAAAAGGGTTGG+TGG - chr8_1:59559375-59559394 Msa1204090:CDS 40.0%
GGAAAAAACTGTCTTGTCAC+AGG + chr8_1:59559567-59559586 None:intergenic 40.0%
TCATCAGACTCTTGATCCAT+AGG + chr8_1:59559588-59559607 None:intergenic 40.0%
GGATCAAGAGTCTGATGATA+TGG - chr8_1:59559590-59559609 Msa1204090:intron 40.0%
GTTATAGCATCTTCATGTGG+TGG - chr8_1:59559612-59559631 Msa1204090:intron 40.0%
! TAGTTTTCCTCGTGCTCATT+GGG - chr8_1:59559659-59559678 Msa1204090:intron 40.0%
TGTCAATCAGAAACACTTGG+AGG - chr8_1:59559696-59559715 Msa1204090:intron 40.0%
TTTACAGAAGAACAGGTCGA+TGG - chr8_1:59559820-59559839 Msa1204090:intron 40.0%
TTACAGAAGAACAGGTCGAT+GGG - chr8_1:59559821-59559840 Msa1204090:intron 40.0%
GTCGATGGGAATCACATATA+TGG - chr8_1:59559835-59559854 Msa1204090:intron 40.0%
TCTCATAATTGCAGGGATTG+TGG - chr8_1:59559952-59559971 Msa1204090:CDS 40.0%
! GGTGTTACATTGCACAAATG+TGG - chr8_1:59560539-59560558 Msa1204090:CDS 40.0%
CATTGCACAAATGTGGAAGA+TGG - chr8_1:59560546-59560565 Msa1204090:CDS 40.0%
GCTTGGATCAAAATTGGTGA+CGG + chr8_1:59560853-59560872 None:intergenic 40.0%
AGCTCGTTGTCATATATGCT+TGG + chr8_1:59560870-59560889 None:intergenic 40.0%
GATCAATCTAATTGGCAGCA+TGG - chr8_1:59561109-59561128 Msa1204090:CDS 40.0%
TCAATCTAATTGGCAGCATG+GGG - chr8_1:59561111-59561130 Msa1204090:intron 40.0%
! TCACCCACCAAATTTTCATG+TGG - chr8_1:59561453-59561472 Msa1204090:intron 40.0%
! CACCCACCAAATTTTCATGT+GGG - chr8_1:59561454-59561473 Msa1204090:intron 40.0%
GTACCCACATGAAAATTTGG+TGG + chr8_1:59561460-59561479 None:intergenic 40.0%
! CGAACCGCAATTTAAAACCA+TGG + chr8_1:59561750-59561769 None:intergenic 40.0%
CAACAACAACAATGGCAATC+AGG - chr8_1:59562057-59562076 Msa1204090:CDS 40.0%
GCAGCAGTTGCTAAATAATG+TGG + chr8_1:59562084-59562103 None:intergenic 40.0%
CGGTTAAATAGGGATCAAGA+GGG + chr8_1:59562198-59562217 None:intergenic 40.0%
ACGGTTAAATAGGGATCAAG+AGG + chr8_1:59562199-59562218 None:intergenic 40.0%
ATGTTAGAAGGGATAGCAAG+AGG - chr8_1:59562305-59562324 Msa1204090:five_prime_UTR 40.0%
ATTGCTATCACACACACTCA+TGG - chr8_1:59562476-59562495 Msa1204090:five_prime_UTR 40.0%
AGAGAGAGAGAGAGAGTGAA+TGG - chr8_1:59558895-59558914 Msa1204090:three_prime_UTR 45.0%
TCGGCTAACATTGCTGAAAC+TGG - chr8_1:59558942-59558961 Msa1204090:three_prime_UTR 45.0%
TGGCCTCGTCTATACTGTAT+TGG - chr8_1:59558962-59558981 Msa1204090:three_prime_UTR 45.0%
GGCCTCGTCTATACTGTATT+GGG - chr8_1:59558963-59558982 Msa1204090:three_prime_UTR 45.0%
TGCCCAATACAGTATAGACG+AGG + chr8_1:59558968-59558987 None:intergenic 45.0%
! GCATCTTCATGTGGTGGAAA+TGG - chr8_1:59559618-59559637 Msa1204090:intron 45.0%
!! CTAGTTTTCCTCGTGCTCAT+TGG - chr8_1:59559658-59559677 Msa1204090:intron 45.0%
AGAAAAGTAGAAGAGGGCCA+AGG - chr8_1:59559766-59559785 Msa1204090:intron 45.0%
!!! CAAAGCACTGGTTTTCCAAG+AGG - chr8_1:59560500-59560519 Msa1204090:intron 45.0%
TGATCACCAGCATTACTTGC+TGG + chr8_1:59561019-59561038 None:intergenic 45.0%
CAATCTAATTGGCAGCATGG+GGG - chr8_1:59561112-59561131 Msa1204090:intron 45.0%
GCATATGGAAGGGATTTGCA+TGG - chr8_1:59561310-59561329 Msa1204090:intron 45.0%
!! ATGGAGAGAGTGAAGCATTG+AGG - chr8_1:59561329-59561348 Msa1204090:intron 45.0%
TTAAATGGCAGTTGCAGTCG+CGG + chr8_1:59561887-59561906 None:intergenic 45.0%
! AGGGTGGTCTAATTTGAGGT+GGG + chr8_1:59562125-59562144 None:intergenic 45.0%
GAAGAGGGTGGTCTAATTTG+AGG + chr8_1:59562129-59562148 None:intergenic 45.0%
TGCCAAGCTTGAGAAGAAGA+GGG + chr8_1:59562144-59562163 None:intergenic 45.0%
CAAGCTTGGCAGCACATAAA+TGG - chr8_1:59562153-59562172 Msa1204090:five_prime_UTR 45.0%
AAGAGGGTCTCATGAGATTG+CGG + chr8_1:59562182-59562201 None:intergenic 45.0%
!!! ATTTTATTTTATTTCATTTA+TGG - chr8_1:59560214-59560233 Msa1204090:intron 5.0%
!!! TTTTATTTTATTTCATTTAT+GGG - chr8_1:59560215-59560234 Msa1204090:intron 5.0%
!! AAAAAAAATGTTTAAATATT+AGG + chr8_1:59561215-59561234 None:intergenic 5.0%
!! TAATAAAATTAACAAAATAA+GGG + chr8_1:59562264-59562283 None:intergenic 5.0%
TGCAACACCTACCTCTTCAC+TGG - chr8_1:59559032-59559051 Msa1204090:three_prime_UTR 50.0%
CAAACCTAGGACCAGTGAAG+AGG + chr8_1:59559046-59559065 None:intergenic 50.0%
TTTCCTCGTGCTCATTGGGT+AGG - chr8_1:59559663-59559682 Msa1204090:intron 50.0%
GTACTTCGTCGACAAAGCAC+TGG - chr8_1:59560488-59560507 Msa1204090:intron 50.0%
GCACAAATGTGGAAGATGGG+AGG - chr8_1:59560550-59560569 Msa1204090:CDS 50.0%
TGGAAGATGGGAGGCAAGAA+TGG - chr8_1:59560559-59560578 Msa1204090:CDS 50.0%
GGAAGATGGGAGGCAAGAAT+GGG - chr8_1:59560560-59560579 Msa1204090:CDS 50.0%
! TCTGGGCTTGTTTGACACTG+AGG - chr8_1:59560681-59560700 Msa1204090:intron 50.0%
ACACTGAGGTTGAAGCTGCA+AGG - chr8_1:59560695-59560714 Msa1204090:CDS 50.0%
GCAGAACCAGCAAGTAATGC+TGG - chr8_1:59561010-59561029 Msa1204090:intron 50.0%
TAGTTTCCCAGCAGCAGCTA+TGG - chr8_1:59561988-59562007 Msa1204090:CDS 50.0%
GAGGGTGGTCTAATTTGAGG+TGG + chr8_1:59562126-59562145 None:intergenic 50.0%
CAAGCTTGAGAAGAAGAGGG+TGG + chr8_1:59562141-59562160 None:intergenic 50.0%
CACCCTCTTCTTCTCAAGCT+TGG - chr8_1:59562139-59562158 Msa1204090:five_prime_UTR 50.0%
CTGCCAAGCTTGAGAAGAAG+AGG + chr8_1:59562145-59562164 None:intergenic 50.0%
CCTAGGACCAGTGAAGAGGT+AGG + chr8_1:59559042-59559061 None:intergenic 55.0%
CCTACCTCTTCACTGGTCCT+AGG - chr8_1:59559039-59559058 Msa1204090:three_prime_UTR 55.0%
ACACCTACCCAATGAGCACG+AGG + chr8_1:59559669-59559688 None:intergenic 55.0%
ACACAGCACATGCAGCTGCT+CGG - chr8_1:59560166-59560185 Msa1204090:intron 55.0%
GCATGGGGGAAACAAGCCTA+AGG - chr8_1:59561126-59561145 Msa1204090:intron 55.0%
AGCAGCTATGGAAGCCGAGT+TGG - chr8_1:59562000-59562019 Msa1204090:CDS 55.0%
ACTGCTGCTGCAGCATCATC+AGG - chr8_1:59562096-59562115 Msa1204090:exon 55.0%
AGGGTCTCATGAGATTGCGG+AGG + chr8_1:59562179-59562198 None:intergenic 55.0%
CGGCTTCCATAGCTGCTGCT+GGG + chr8_1:59561997-59562016 None:intergenic 60.0%
TCGGCTTCCATAGCTGCTGC+TGG + chr8_1:59561998-59562017 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59558892 59562509 59558892 ID=Msa1204090;Name=Msa1204090
chr8_1 mRNA 59558892 59562509 59558892 ID=Msa1204090-mRNA-1;Parent=Msa1204090;Name=Msa1204090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=396|1|1|1|1|1|10|306|518
chr8_1 exon 59558892 59559410 59558892 ID=Msa1204090-mRNA-1:exon:19253;Parent=Msa1204090-mRNA-1
chr8_1 exon 59559930 59560139 59559930 ID=Msa1204090-mRNA-1:exon:19252;Parent=Msa1204090-mRNA-1
chr8_1 exon 59560254 59560390 59560254 ID=Msa1204090-mRNA-1:exon:19251;Parent=Msa1204090-mRNA-1
chr8_1 exon 59560501 59560592 59560501 ID=Msa1204090-mRNA-1:exon:19250;Parent=Msa1204090-mRNA-1
chr8_1 exon 59560685 59560729 59560685 ID=Msa1204090-mRNA-1:exon:19249;Parent=Msa1204090-mRNA-1
chr8_1 exon 59560801 59560946 59560801 ID=Msa1204090-mRNA-1:exon:19248;Parent=Msa1204090-mRNA-1
chr8_1 exon 59561042 59561129 59561042 ID=Msa1204090-mRNA-1:exon:19247;Parent=Msa1204090-mRNA-1
chr8_1 exon 59561214 59561244 59561214 ID=Msa1204090-mRNA-1:exon:19246;Parent=Msa1204090-mRNA-1
chr8_1 exon 59561410 59561435 59561410 ID=Msa1204090-mRNA-1:exon:19245;Parent=Msa1204090-mRNA-1
chr8_1 exon 59561545 59562509 59561545 ID=Msa1204090-mRNA-1:exon:19244;Parent=Msa1204090-mRNA-1
chr8_1 five_prime_UTR 59562114 59562509 59562114 ID=Msa1204090-mRNA-1:five_prime_utr;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59561545 59562113 59561545 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59561410 59561435 59561410 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59561214 59561244 59561214 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59561042 59561129 59561042 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59560801 59560946 59560801 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59560685 59560729 59560685 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59560501 59560592 59560501 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59560254 59560390 59560254 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59559930 59560139 59559930 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 CDS 59559198 59559410 59559198 ID=Msa1204090-mRNA-1:cds;Parent=Msa1204090-mRNA-1
chr8_1 three_prime_UTR 59558892 59559197 59558892 ID=Msa1204090-mRNA-1:three_prime_utr;Parent=Msa1204090-mRNA-1
Gene Sequence

>Msa1204090

ATGTGGGATCTTAATGGTTCACCTTTTAAGAGAAAAGAAGATCATGAAAAATCTGAAGGATGTTCTTCACTCAAAGATGGAGATGAAGATAAAGCAAAAAGGGTTGGTGGATCTGTTTCAAATTCAAGCTCTTCAGCTATAGTAATAGAAGAAGATTCAGAAGAAGACAATAGCAACAAAGACATGATGATGATGAAGAAAAGAAACAGTAAGATATTTGGTTTCTCAGTAACTCAAGAAGAAGAAGAAGAAAATTCCTTAGACAGTGAAAATTGTCCTGTGACAAGACAGTTTTTTCCTATGGATCAAGAGTCTGATGATATGGTTATAGCATCTTCATGTGGTGGAAATGGAACATCTTCATCTTCTTCTAGTTTTCCTCGTGCTCATTGGGTAGGTGTGAAATTTTGTCAATCAGAAACACTTGGAGGTCGAAAATCAGTAGAACTTTCTTCTTCATCTTCTTCACAACCTATGAAGAAAAGTAGAAGAGGGCCAAGGTCAAGAAGTTCACAATATAGAGGAGTTACTTTTTACAGAAGAACAGGTCGATGGGAATCACATATATGGGATTGTGGAAAACAAGTGTATCTTGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCAGCTATTAAGTTTAGAGGAGTTGAGGCTGACATAAATTTTAACATTGAAGATTATGAAGAAGACTTGAAGCAGATGACTAATTTGACAAAAGAAGAGTTTGTACATGTACTTCGTCGACAAAGCACTGGTTTTCCAAGAGGAAGCTCTAAATATAGAGGTGTTACATTGCACAAATGTGGAAGATGGGAGGCAAGAATGGGACAATTTTTAGGAAAAAAGTACGTTTATCTGGGCTTGTTTGACACTGAGGTTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGCAATGGTAAAGAGGCCGTCACCAATTTTGATCCAAGCATATATGACAACGAGCTTAATAATTCTGCAGAACCAGCAAGTAATGCTGGTGATCACAATTTGGATTTAAGTTTGGGAAATTCAAGTTCAAAGCCTATCAATGATACTCAAGCAAATCATGCATCTGATCAATCTAATTGGCAGCATGGGGGAAACAAGCCTAAGCTTGTGAATATACTCCCAAAACCATATAATAGACCAAACAATATGGAAGCATATGGAAGGGATTTGCATGGAGAGAGTGAAGCATTGAGGATGCTAAGTCAAACTCACCTTCATTCTTCATCATCAAATGAAATGCATAGATATGCTCCTTTTAGAGATCAGTCACAAATGCTTCAAAGTTTTGCACATACTCACCCACCAAATTTTCATTTTCCCAGCAGCAGCTATGGAAGCCGAGTTGGAAGTGATCTTTCATTATCAACAAGCAATCATCATCAACAACAACAATGGCAATCAGGGCCACATTATTTAGCAACTGCTGCTGCAGCATCATCAGGATTCCCACCTCAAATTAGACCACCCTCTTCTTCTCAAGCTTGGCAGCACATAAATGGCCTCCGCAATCTCATGAGACCCTCTTGA
Protein sequence

>Msa1204090

MWDLNGSPFKRKEDHEKSEGCSSLKDGDEDKAKRVGGSVSNSSSSAIVIEEDSEEDNSNKDMMMMKKRNSKIFGFSVTQEEEEENSLDSENCPVTRQFFPMDQESDDMVIASSCGGNGTSSSSSSFPRAHWVGVKFCQSETLGGRKSVELSSSSSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNNSAEPASNAGDHNLDLSLGNSSSKPINDTQANHASDQSNWQHGGNKPKLVNILPKPYNRPNNMEAYGRDLHGESEALRMLSQTHLHSSSSNEMHRYAPFRDQSQMLQSFAHTHPPNFHFPSSSYGSRVGSDLSLSTSNHHQQQQWQSGPHYLATAAAASSGFPPQIRPPSSSQAWQHINGLRNLMRPS*