Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128020 | GAU46537.1 | 66.981 | 106 | 34 | 1 | 7 | 111 | 1 | 106 | 6.74e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128020 | A0A2Z6PM71 | 66.981 | 106 | 34 | 1 | 7 | 111 | 1 | 106 | 3.22e-41 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0128020 | 0.804047 | 2.605271e-49 | -8.615850e-47 |
| Msa0012040 | Msa0128020 | 0.841179 | 5.559168e-58 | -8.615850e-47 |
| Msa0012080 | Msa0128020 | 0.801445 | 8.974930e-49 | -8.615850e-47 |
| Msa0017510 | Msa0128020 | 0.814985 | 1.165741e-51 | -8.615850e-47 |
| Msa0020930 | Msa0128020 | 0.807468 | 4.981030e-50 | -8.615850e-47 |
| Msa0028660 | Msa0128020 | 0.825577 | 4.345903e-54 | -8.615850e-47 |
| Msa0033980 | Msa0128020 | 0.911463 | 5.910792e-83 | -8.615850e-47 |
| Msa0039330 | Msa0128020 | 0.802483 | 5.491037e-49 | -8.615850e-47 |
| Msa0040450 | Msa0128020 | 0.834139 | 3.562571e-56 | -8.615850e-47 |
| Msa0044540 | Msa0128020 | -0.844645 | 6.648981e-59 | -8.615850e-47 |
| Msa0051770 | Msa0128020 | 0.833611 | 4.827177e-56 | -8.615850e-47 |
| Msa0052640 | Msa0128020 | 0.808870 | 2.503624e-50 | -8.615850e-47 |
| Msa0052770 | Msa0128020 | 0.816869 | 4.426569e-52 | -8.615850e-47 |
| Msa0054440 | Msa0128020 | 0.804204 | 2.417060e-49 | -8.615850e-47 |
| Msa0054480 | Msa0128020 | 0.822198 | 2.693364e-53 | -8.615850e-47 |
| Msa0062600 | Msa0128020 | 0.807670 | 4.513599e-50 | -8.615850e-47 |
| Msa0067940 | Msa0128020 | 0.812196 | 4.787213e-51 | -8.615850e-47 |
| Msa0068680 | Msa0128020 | 0.800162 | 1.640362e-48 | -8.615850e-47 |
| Msa0081930 | Msa0128020 | 0.931158 | 5.704482e-94 | -8.615850e-47 |
| Msa0086650 | Msa0128020 | 0.828054 | 1.112475e-54 | -8.615850e-47 |
| Msa0091210 | Msa0128020 | -0.806820 | 6.830278e-50 | -8.615850e-47 |
| Msa0107120 | Msa0128020 | 0.807916 | 4.000374e-50 | -8.615850e-47 |
| Msa0107180 | Msa0128020 | 0.816193 | 6.272445e-52 | -8.615850e-47 |
| Msa0109690 | Msa0128020 | 0.811380 | 7.207137e-51 | -8.615850e-47 |
| Msa0112770 | Msa0128020 | 0.805983 | 1.025501e-49 | -8.615850e-47 |
| Msa0121590 | Msa0128020 | 0.803922 | 2.766147e-49 | -8.615850e-47 |
| Msa0128020 | Msa0133130 | 0.817656 | 2.944492e-52 | -8.615850e-47 |
| Msa0128020 | Msa0135380 | 0.818506 | 1.891347e-52 | -8.615850e-47 |
| Msa0128020 | Msa0136070 | 0.826497 | 2.626002e-54 | -8.615850e-47 |
| Msa0128020 | Msa0136100 | 0.815651 | 8.288701e-52 | -8.615850e-47 |
| Msa0128020 | Msa0150820 | 0.823485 | 1.350488e-53 | -8.615850e-47 |
| Msa0128020 | Msa0157290 | 0.814115 | 1.815486e-51 | -8.615850e-47 |
| Msa0128020 | Msa0160550 | 0.833415 | 5.405329e-56 | -8.615850e-47 |
| Msa0128020 | Msa0165220 | 0.803511 | 3.367073e-49 | -8.615850e-47 |
| Msa0128020 | Msa0172070 | 0.803071 | 4.151549e-49 | -8.615850e-47 |
| Msa0128020 | Msa0173990 | 0.824330 | 8.559240e-54 | -8.615850e-47 |
| Msa0128020 | Msa0178930 | 0.811860 | 5.667613e-51 | -8.615850e-47 |
| Msa0128020 | Msa0183300 | -0.800183 | 1.623958e-48 | -8.615850e-47 |
| Msa0128020 | Msa0184960 | 0.805910 | 1.062377e-49 | -8.615850e-47 |
| Msa0128020 | Msa0188830 | 0.801110 | 1.051007e-48 | -8.615850e-47 |
| Msa0128020 | Msa0192510 | 0.806709 | 7.211802e-50 | -8.615850e-47 |
| Msa0128020 | Msa0197660 | 0.823026 | 1.728736e-53 | -8.615850e-47 |
| Msa0128020 | Msa0210450 | 0.804123 | 2.512358e-49 | -8.615850e-47 |
| Msa0128020 | Msa0212310 | 0.805255 | 1.458067e-49 | -8.615850e-47 |
| Msa0128020 | Msa0215680 | 0.811506 | 6.766604e-51 | -8.615850e-47 |
| Msa0128020 | Msa0217680 | 0.822209 | 2.677069e-53 | -8.615850e-47 |
| Msa0128020 | Msa0220440 | 0.801389 | 9.214316e-49 | -8.615850e-47 |
| Msa0128020 | Msa0220580 | 0.830696 | 2.539951e-55 | -8.615850e-47 |
| Msa0128020 | Msa0220720 | 0.801485 | 8.807221e-49 | -8.615850e-47 |
| Msa0128020 | Msa0222620 | 0.800273 | 1.557182e-48 | -8.615850e-47 |
| Msa0128020 | Msa0222890 | 0.826314 | 2.903133e-54 | -8.615850e-47 |
| Msa0128020 | Msa0223410 | -0.804343 | 2.261375e-49 | -8.615850e-47 |
| Msa0128020 | Msa0233350 | 0.808489 | 3.020102e-50 | -8.615850e-47 |
| Msa0128020 | Msa0239800 | 0.823567 | 1.291927e-53 | -8.615850e-47 |
| Msa0128020 | Msa0257500 | 0.808780 | 2.618213e-50 | -8.615850e-47 |
| Msa0128020 | Msa0260680 | 0.838520 | 2.739740e-57 | -8.615850e-47 |
| Msa0128020 | Msa0264330 | 0.803682 | 3.103167e-49 | -8.615850e-47 |
| Msa0128020 | Msa0265380 | 0.841710 | 4.027720e-58 | -8.615850e-47 |
| Msa0128020 | Msa0277820 | 0.805837 | 1.100512e-49 | -8.615850e-47 |
| Msa0128020 | Msa0279220 | 0.834158 | 3.522856e-56 | -8.615850e-47 |
| Msa0128020 | Msa0279240 | 0.814519 | 1.478000e-51 | -8.615850e-47 |
| Msa0128020 | Msa0280090 | 0.838284 | 3.150896e-57 | -8.615850e-47 |
| Msa0128020 | Msa0282250 | 0.824892 | 6.311095e-54 | -8.615850e-47 |
| Msa0128020 | Msa0285450 | 0.826536 | 2.570304e-54 | -8.615850e-47 |
| Msa0128020 | Msa0286500 | 0.800088 | 1.698321e-48 | -8.615850e-47 |
| Msa0128020 | Msa0287410 | 0.800762 | 1.237653e-48 | -8.615850e-47 |
| Msa0128020 | Msa0298700 | 0.800380 | 1.480804e-48 | -8.615850e-47 |
| Msa0128020 | Msa0299580 | 0.805494 | 1.299562e-49 | -8.615850e-47 |
| Msa0128020 | Msa0303360 | 0.829662 | 4.541568e-55 | -8.615850e-47 |
| Msa0128020 | Msa0306210 | -0.805576 | 1.248917e-49 | -8.615850e-47 |
| Msa0128020 | Msa0309750 | 0.814662 | 1.374562e-51 | -8.615850e-47 |
| Msa0128020 | Msa0309770 | 0.844173 | 8.906083e-59 | -8.615850e-47 |
| Msa0128020 | Msa0317510 | 0.820083 | 8.273822e-53 | -8.615850e-47 |
| Msa0128020 | Msa0318980 | 0.839245 | 1.777871e-57 | -8.615850e-47 |
| Msa0128020 | Msa0336040 | -0.801043 | 1.084636e-48 | -8.615850e-47 |
| Msa0128020 | Msa0336420 | 0.818538 | 1.860457e-52 | -8.615850e-47 |
| Msa0128020 | Msa0337620 | 0.815552 | 8.720955e-52 | -8.615850e-47 |
| Msa0128020 | Msa0342360 | 0.802134 | 6.481094e-49 | -8.615850e-47 |
| Msa0128020 | Msa0347770 | 0.800593 | 1.339789e-48 | -8.615850e-47 |
| Msa0128020 | Msa0364000 | 0.801863 | 7.366813e-49 | -8.615850e-47 |
| Msa0128020 | Msa0372340 | 0.800257 | 1.569036e-48 | -8.615850e-47 |
| Msa0128020 | Msa0373930 | 0.819152 | 1.349485e-52 | -8.615850e-47 |
| Msa0128020 | Msa0379640 | 0.806013 | 1.011061e-49 | -8.615850e-47 |
| Msa0128020 | Msa0383800 | 0.842725 | 2.170114e-58 | -8.615850e-47 |
| Msa0128020 | Msa0385580 | 0.813747 | 2.188289e-51 | -8.615850e-47 |
| Msa0128020 | Msa0395970 | 0.804141 | 2.490226e-49 | -8.615850e-47 |
| Msa0128020 | Msa0397750 | 0.829303 | 5.552006e-55 | -8.615850e-47 |
| Msa0128020 | Msa0402650 | 0.803701 | 3.074064e-49 | -8.615850e-47 |
| Msa0128020 | Msa0412840 | 0.803806 | 2.923888e-49 | -8.615850e-47 |
| Msa0128020 | Msa0420840 | 0.820500 | 6.637126e-53 | -8.615850e-47 |
| Msa0128020 | Msa0420960 | 0.807657 | 4.541233e-50 | -8.615850e-47 |
| Msa0128020 | Msa0432770 | 0.806744 | 7.087512e-50 | -8.615850e-47 |
| Msa0128020 | Msa0433640 | 0.808290 | 3.330495e-50 | -8.615850e-47 |
| Msa0128020 | Msa0434180 | 0.845612 | 3.643809e-59 | -8.615850e-47 |
| Msa0128020 | Msa0440520 | 0.801395 | 9.189559e-49 | -8.615850e-47 |
| Msa0128020 | Msa0442850 | 0.806661 | 7.379506e-50 | -8.615850e-47 |
| Msa0128020 | Msa0446020 | 0.804277 | 2.333499e-49 | -8.615850e-47 |
| Msa0128020 | Msa0467060 | 0.833293 | 5.795239e-56 | -8.615850e-47 |
| Msa0128020 | Msa0477130 | -0.801641 | 8.180269e-49 | -8.615850e-47 |
| Msa0128020 | Msa0479660 | 0.812161 | 4.872258e-51 | -8.615850e-47 |
| Msa0128020 | Msa0479970 | 0.824039 | 1.001383e-53 | -8.615850e-47 |
| Msa0128020 | Msa0480000 | 0.803642 | 3.162835e-49 | -8.615850e-47 |
| Msa0128020 | Msa0481530 | 0.823358 | 1.446170e-53 | -8.615850e-47 |
| Msa0128020 | Msa0483850 | 0.807680 | 4.490546e-50 | -8.615850e-47 |
| Msa0128020 | Msa0484780 | 0.831074 | 2.050649e-55 | -8.615850e-47 |
| Msa0128020 | Msa0487800 | 0.808264 | 3.373153e-50 | -8.615850e-47 |
| Msa0128020 | Msa0491030 | 0.818406 | 1.993124e-52 | -8.615850e-47 |
| Msa0128020 | Msa0493250 | 0.815607 | 8.476107e-52 | -8.615850e-47 |
| Msa0128020 | Msa0498650 | 0.813837 | 2.090537e-51 | -8.615850e-47 |
| Msa0128020 | Msa0500360 | 0.805583 | 1.244759e-49 | -8.615850e-47 |
| Msa0128020 | Msa0512750 | 0.811823 | 5.774119e-51 | -8.615850e-47 |
| Msa0128020 | Msa0512900 | 0.805675 | 1.190370e-49 | -8.615850e-47 |
| Msa0128020 | Msa0514290 | -0.803008 | 4.278207e-49 | -8.615850e-47 |
| Msa0128020 | Msa0521540 | 0.805558 | 1.259471e-49 | -8.615850e-47 |
| Msa0128020 | Msa0522070 | 0.804096 | 2.545033e-49 | -8.615850e-47 |
| Msa0128020 | Msa0523460 | 0.805860 | 1.088591e-49 | -8.615850e-47 |
| Msa0128020 | Msa0529890 | 0.828734 | 7.625327e-55 | -8.615850e-47 |
| Msa0128020 | Msa0550430 | 0.804388 | 2.212918e-49 | -8.615850e-47 |
| Msa0128020 | Msa0553460 | 0.804349 | 2.254818e-49 | -8.615850e-47 |
| Msa0128020 | Msa0558690 | 0.808629 | 2.819794e-50 | -8.615850e-47 |
| Msa0128020 | Msa0577500 | 0.802562 | 5.290338e-49 | -8.615850e-47 |
| Msa0128020 | Msa0578040 | 0.818751 | 1.664923e-52 | -8.615850e-47 |
| Msa0128020 | Msa0584860 | 0.809855 | 1.539378e-50 | -8.615850e-47 |
| Msa0128020 | Msa0585560 | 0.824435 | 8.086572e-54 | -8.615850e-47 |
| Msa0128020 | Msa0593650 | 0.819929 | 8.972074e-53 | -8.615850e-47 |
| Msa0128020 | Msa0602390 | 0.807864 | 4.103302e-50 | -8.615850e-47 |
| Msa0128020 | Msa0607050 | 0.815136 | 1.078934e-51 | -8.615850e-47 |
| Msa0128020 | Msa0607540 | 0.824775 | 6.723915e-54 | -8.615850e-47 |
| Msa0128020 | Msa0610430 | 0.858344 | 8.784086e-63 | -8.615850e-47 |
| Msa0128020 | Msa0617640 | 0.804738 | 1.870589e-49 | -8.615850e-47 |
| Msa0128020 | Msa0621490 | 0.815659 | 8.254074e-52 | -8.615850e-47 |
| Msa0128020 | Msa0621590 | 0.806964 | 6.368136e-50 | -8.615850e-47 |
| Msa0128020 | Msa0623080 | 0.825261 | 5.161031e-54 | -8.615850e-47 |
| Msa0128020 | Msa0625720 | 0.829250 | 5.717321e-55 | -8.615850e-47 |
| Msa0128020 | Msa0633840 | 0.829943 | 3.879952e-55 | -8.615850e-47 |
| Msa0128020 | Msa0649110 | 0.813040 | 3.129321e-51 | -8.615850e-47 |
| Msa0128020 | Msa0649490 | 0.813870 | 2.056509e-51 | -8.615850e-47 |
| Msa0128020 | Msa0650020 | 0.802154 | 6.417980e-49 | -8.615850e-47 |
| Msa0128020 | Msa0657970 | 0.834381 | 3.098483e-56 | -8.615850e-47 |
| Msa0128020 | Msa0661190 | -0.829154 | 6.032036e-55 | -8.615850e-47 |
| Msa0128020 | Msa0663390 | 0.823957 | 1.046767e-53 | -8.615850e-47 |
| Msa0128020 | Msa0663920 | 0.812168 | 4.856890e-51 | -8.615850e-47 |
| Msa0128020 | Msa0669440 | 0.801682 | 8.023778e-49 | -8.615850e-47 |
| Msa0128020 | Msa0673460 | 0.808116 | 3.626607e-50 | -8.615850e-47 |
| Msa0128020 | Msa0690150 | 0.807963 | 3.910565e-50 | -8.615850e-47 |
| Msa0128020 | Msa0692230 | 0.809274 | 2.051967e-50 | -8.615850e-47 |
| Msa0128020 | Msa0692830 | 0.819367 | 1.205365e-52 | -8.615850e-47 |
| Msa0128020 | Msa0692950 | 0.824616 | 7.330603e-54 | -8.615850e-47 |
| Msa0128020 | Msa0693380 | 0.823893 | 1.083745e-53 | -8.615850e-47 |
| Msa0128020 | Msa0701900 | 0.800307 | 1.532506e-48 | -8.615850e-47 |
| Msa0128020 | Msa0708520 | 0.807258 | 5.518580e-50 | -8.615850e-47 |
| Msa0128020 | Msa0709400 | 0.800075 | 1.708640e-48 | -8.615850e-47 |
| Msa0128020 | Msa0709500 | 0.806531 | 7.863395e-50 | -8.615850e-47 |
| Msa0128020 | Msa0711780 | 0.829605 | 4.688389e-55 | -8.615850e-47 |
| Msa0128020 | Msa0715700 | 0.805717 | 1.166776e-49 | -8.615850e-47 |
| Msa0128020 | Msa0716530 | 0.800895 | 1.162682e-48 | -8.615850e-47 |
| Msa0128020 | Msa0716840 | 0.828570 | 8.354229e-55 | -8.615850e-47 |
| Msa0128020 | Msa0742390 | 0.803254 | 3.804872e-49 | -8.615850e-47 |
| Msa0128020 | Msa0743720 | 0.824982 | 6.007641e-54 | -8.615850e-47 |
| Msa0128020 | Msa0743950 | 0.810628 | 1.048668e-50 | -8.615850e-47 |
| Msa0128020 | Msa0745790 | 0.827022 | 1.968189e-54 | -8.615850e-47 |
| Msa0128020 | Msa0750430 | 0.817279 | 3.580149e-52 | -8.615850e-47 |
| Msa0128020 | Msa0767300 | 0.826344 | 2.855651e-54 | -8.615850e-47 |
| Msa0128020 | Msa0769920 | 0.816614 | 5.050504e-52 | -8.615850e-47 |
| Msa0128020 | Msa0770200 | 0.810602 | 1.062567e-50 | -8.615850e-47 |
| Msa0128020 | Msa0773840 | 0.817794 | 2.741629e-52 | -8.615850e-47 |
| Msa0128020 | Msa0790510 | 0.814229 | 1.713599e-51 | -8.615850e-47 |
| Msa0128020 | Msa0793800 | 0.806681 | 7.311166e-50 | -8.615850e-47 |
| Msa0128020 | Msa0794670 | 0.833790 | 4.356547e-56 | -8.615850e-47 |
| Msa0128020 | Msa0796700 | 0.855980 | 4.382960e-62 | -8.615850e-47 |
| Msa0128020 | Msa0801760 | 0.817664 | 2.932977e-52 | -8.615850e-47 |
| Msa0128020 | Msa0803890 | 0.803755 | 2.995767e-49 | -8.615850e-47 |
| Msa0128020 | Msa0804230 | 0.836607 | 8.475375e-57 | -8.615850e-47 |
| Msa0128020 | Msa0808270 | 0.822931 | 1.818939e-53 | -8.615850e-47 |
| Msa0128020 | Msa0816590 | 0.804415 | 2.184625e-49 | -8.615850e-47 |
| Msa0128020 | Msa0816700 | 0.836066 | 1.163026e-56 | -8.615850e-47 |
| Msa0128020 | Msa0824680 | 0.807728 | 4.385485e-50 | -8.615850e-47 |
| Msa0128020 | Msa0827780 | 0.816642 | 4.977781e-52 | -8.615850e-47 |
| Msa0128020 | Msa0840820 | 0.815843 | 7.508923e-52 | -8.615850e-47 |
| Msa0128020 | Msa0844240 | 0.813314 | 2.725634e-51 | -8.615850e-47 |
| Msa0128020 | Msa0850960 | 0.809401 | 1.927002e-50 | -8.615850e-47 |
| Msa0128020 | Msa0864250 | 0.809377 | 1.950274e-50 | -8.615850e-47 |
| Msa0128020 | Msa0871270 | 0.812760 | 3.604394e-51 | -8.615850e-47 |
| Msa0128020 | Msa0876200 | 0.820168 | 7.909049e-53 | -8.615850e-47 |
| Msa0128020 | Msa0878500 | 0.808204 | 3.473801e-50 | -8.615850e-47 |
| Msa0128020 | Msa0880140 | 0.815710 | 8.039253e-52 | -8.615850e-47 |
| Msa0128020 | Msa0897080 | 0.806175 | 9.343465e-50 | -8.615850e-47 |
| Msa0128020 | Msa0902750 | 0.808498 | 3.007016e-50 | -8.615850e-47 |
| Msa0128020 | Msa0909110 | 0.810561 | 1.084448e-50 | -8.615850e-47 |
| Msa0128020 | Msa0920870 | 0.806001 | 1.016983e-49 | -8.615850e-47 |
| Msa0128020 | Msa0923330 | 0.814263 | 1.684085e-51 | -8.615850e-47 |
| Msa0128020 | Msa0925810 | 0.810528 | 1.102224e-50 | -8.615850e-47 |
| Msa0128020 | Msa0935670 | 0.832747 | 7.925854e-56 | -8.615850e-47 |
| Msa0128020 | Msa0935850 | 0.803103 | 4.089639e-49 | -8.615850e-47 |
| Msa0128020 | Msa0938220 | 0.819880 | 9.205271e-53 | -8.615850e-47 |
| Msa0128020 | Msa0942070 | 0.807184 | 5.721580e-50 | -8.615850e-47 |
| Msa0128020 | Msa0944190 | 0.820112 | 8.147670e-53 | -8.615850e-47 |
| Msa0128020 | Msa0945970 | 0.820755 | 5.801852e-53 | -8.615850e-47 |
| Msa0128020 | Msa0947660 | 0.809498 | 1.837200e-50 | -8.615850e-47 |
| Msa0128020 | Msa0959360 | 0.815112 | 1.092274e-51 | -8.615850e-47 |
| Msa0128020 | Msa0968680 | 0.812561 | 3.984999e-51 | -8.615850e-47 |
| Msa0128020 | Msa0975340 | 0.805211 | 1.489371e-49 | -8.615850e-47 |
| Msa0128020 | Msa0976670 | 0.805744 | 1.151605e-49 | -8.615850e-47 |
| Msa0128020 | Msa0989360 | 0.802301 | 5.985478e-49 | -8.615850e-47 |
| Msa0128020 | Msa0993290 | 0.818715 | 1.695843e-52 | -8.615850e-47 |
| Msa0128020 | Msa0993600 | 0.817132 | 3.863418e-52 | -8.615850e-47 |
| Msa0128020 | Msa1003620 | 0.834813 | 2.411732e-56 | -8.615850e-47 |
| Msa0128020 | Msa1012830 | 0.814342 | 1.617565e-51 | -8.615850e-47 |
| Msa0128020 | Msa1014540 | 0.837131 | 6.229732e-57 | -8.615850e-47 |
| Msa0128020 | Msa1023400 | 0.802141 | 6.457667e-49 | -8.615850e-47 |
| Msa0128020 | Msa1046020 | 0.809216 | 2.111106e-50 | -8.615850e-47 |
| Msa0128020 | Msa1046060 | 0.800053 | 1.725888e-48 | -8.615850e-47 |
| Msa0128020 | Msa1046460 | 0.810714 | 1.004784e-50 | -8.615850e-47 |
| Msa0128020 | Msa1051200 | 0.805570 | 1.252706e-49 | -8.615850e-47 |
| Msa0128020 | Msa1053280 | 0.821647 | 3.612373e-53 | -8.615850e-47 |
| Msa0128020 | Msa1061680 | 0.854388 | 1.272212e-61 | -8.615850e-47 |
| Msa0128020 | Msa1069990 | 0.810479 | 1.129603e-50 | -8.615850e-47 |
| Msa0128020 | Msa1075220 | -0.801731 | 7.841152e-49 | -8.615850e-47 |
| Msa0128020 | Msa1075650 | 0.802044 | 6.762051e-49 | -8.615850e-47 |
| Msa0128020 | Msa1082500 | 0.846890 | 1.634614e-59 | -8.615850e-47 |
| Msa0128020 | Msa1087710 | 0.819039 | 1.431575e-52 | -8.615850e-47 |
| Msa0128020 | Msa1089020 | 0.809533 | 1.805123e-50 | -8.615850e-47 |
| Msa0128020 | Msa1089040 | 0.815343 | 9.702985e-52 | -8.615850e-47 |
| Msa0128020 | Msa1090260 | 0.814714 | 1.338567e-51 | -8.615850e-47 |
| Msa0128020 | Msa1098400 | 0.803839 | 2.878206e-49 | -8.615850e-47 |
| Msa0128020 | Msa1098420 | 0.814366 | 1.598389e-51 | -8.615850e-47 |
| Msa0128020 | Msa1107100 | 0.802173 | 6.359853e-49 | -8.615850e-47 |
| Msa0128020 | Msa1116130 | -0.807685 | 4.479494e-50 | -8.615850e-47 |
| Msa0128020 | Msa1121440 | 0.813324 | 2.711169e-51 | -8.615850e-47 |
| Msa0128020 | Msa1124960 | 0.803277 | 3.763881e-49 | -8.615850e-47 |
| Msa0128020 | Msa1125760 | 0.806057 | 9.897709e-50 | -8.615850e-47 |
| Msa0128020 | Msa1131220 | 0.808768 | 2.632835e-50 | -8.615850e-47 |
| Msa0128020 | Msa1154280 | 0.813183 | 2.911420e-51 | -8.615850e-47 |
| Msa0128020 | Msa1154710 | 0.805339 | 1.400526e-49 | -8.615850e-47 |
| Msa0128020 | Msa1171360 | 0.805154 | 1.531146e-49 | -8.615850e-47 |
| Msa0128020 | Msa1171870 | 0.811331 | 7.386151e-51 | -8.615850e-47 |
| Msa0128020 | Msa1172400 | 0.835374 | 1.742032e-56 | -8.615850e-47 |
| Msa0128020 | Msa1173140 | 0.815063 | 1.119858e-51 | -8.615850e-47 |
| Msa0128020 | Msa1174040 | 0.820068 | 8.336630e-53 | -8.615850e-47 |
| Msa0128020 | Msa1185980 | 0.801886 | 7.286229e-49 | -8.615850e-47 |
| Msa0128020 | Msa1188070 | 0.809653 | 1.701186e-50 | -8.615850e-47 |
| Msa0128020 | Msa1190890 | -0.802904 | 4.496911e-49 | -8.615850e-47 |
| Msa0128020 | Msa1199220 | 0.810951 | 8.929176e-51 | -8.615850e-47 |
| Msa0128020 | Msa1199560 | 0.813401 | 2.608189e-51 | -8.615850e-47 |
| Msa0128020 | Msa1203250 | 0.813773 | 2.159761e-51 | -8.615850e-47 |
| Msa0128020 | Msa1204090 | 0.823742 | 1.176100e-53 | -8.615850e-47 |
| Msa0128020 | Msa1205130 | 0.812461 | 4.190411e-51 | -8.615850e-47 |
| Msa0128020 | Msa1209460 | 0.800314 | 1.527421e-48 | -8.615850e-47 |
| Msa0128020 | Msa1214270 | 0.807864 | 4.103302e-50 | -8.615850e-47 |
| Msa0128020 | Msa1214890 | 0.806896 | 6.583060e-50 | -8.615850e-47 |
| Msa0128020 | Msa1217470 | 0.801476 | 8.844423e-49 | -8.615850e-47 |
| Msa0128020 | Msa1233500 | 0.800458 | 1.427824e-48 | -8.615850e-47 |
| Msa0128020 | Msa1233890 | 0.813409 | 2.597463e-51 | -8.615850e-47 |
| Msa0128020 | Msa1240180 | 0.825528 | 4.463667e-54 | -8.615850e-47 |
| Msa0128020 | Msa1240210 | 0.811257 | 7.662142e-51 | -8.615850e-47 |
| Msa0128020 | Msa1242220 | 0.805166 | 1.522004e-49 | -8.615850e-47 |
| Msa0128020 | Msa1244610 | 0.803164 | 3.973290e-49 | -8.615850e-47 |
| Msa0128020 | Msa1247250 | 0.802952 | 4.394915e-49 | -8.615850e-47 |
| Msa0128020 | Msa1250890 | 0.805122 | 1.554358e-49 | -8.615850e-47 |
| Msa0128020 | Msa1251730 | 0.811904 | 5.544496e-51 | -8.615850e-47 |
| Msa0128020 | Msa1252390 | 0.813522 | 2.453008e-51 | -8.615850e-47 |
| Msa0128020 | Msa1263020 | 0.800599 | 1.336093e-48 | -8.615850e-47 |
| Msa0128020 | Msa1271280 | 0.803182 | 3.939388e-49 | -8.615850e-47 |
| Msa0128020 | Msa1277660 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0128020 | Msa1279210 | 0.816887 | 4.385477e-52 | -8.615850e-47 |
| Msa0128020 | Msa1282580 | -0.812265 | 4.625405e-51 | -8.615850e-47 |
| Msa0128020 | Msa1283840 | 0.812908 | 3.345626e-51 | -8.615850e-47 |
| Msa0128020 | Msa1284260 | 0.800023 | 1.750564e-48 | -8.615850e-47 |
| Msa0128020 | Msa1286610 | 0.803135 | 4.028142e-49 | -8.615850e-47 |
| Msa0128020 | Msa1287460 | 0.829071 | 6.318270e-55 | -8.615850e-47 |
| Msa0128020 | Msa1288420 | 0.808026 | 3.791050e-50 | -8.615850e-47 |
| Msa0128020 | Msa1293280 | 0.830851 | 2.326763e-55 | -8.615850e-47 |
| Msa0128020 | Msa1305340 | 0.806868 | 6.675312e-50 | -8.615850e-47 |
| Msa0128020 | Msa1306430 | 0.807546 | 4.793988e-50 | -8.615850e-47 |
| Msa0128020 | Msa1314170 | 0.801857 | 7.386934e-49 | -8.615850e-47 |
| Msa0128020 | Msa1320620 | 0.830106 | 3.539512e-55 | -8.615850e-47 |
| Msa0128020 | Msa1322890 | 0.802414 | 5.673546e-49 | -8.615850e-47 |
| Msa0128020 | Msa1327550 | 0.819643 | 1.042901e-52 | -8.615850e-47 |
| Msa0128020 | Msa1328700 | 0.815078 | 1.111221e-51 | -8.615850e-47 |
| Msa0128020 | Msa1331000 | 0.803599 | 3.227961e-49 | -8.615850e-47 |
| Msa0128020 | Msa1332870 | -0.805842 | 1.098009e-49 | -8.615850e-47 |
| Msa0128020 | Msa1333410 | 0.834875 | 2.327001e-56 | -8.615850e-47 |
| Msa0128020 | Msa1340260 | 0.820126 | 8.088425e-53 | -8.615850e-47 |
| Msa0128020 | Msa1340270 | 0.823729 | 1.183787e-53 | -8.615850e-47 |
| Msa0128020 | Msa1340650 | 0.823203 | 1.572103e-53 | -8.615850e-47 |
| Msa0128020 | Msa1348560 | 0.813217 | 2.861689e-51 | -8.615850e-47 |
| Msa0128020 | Msa1357530 | 0.800464 | 1.424052e-48 | -8.615850e-47 |
| Msa0128020 | Msa1359040 | 0.812007 | 5.263668e-51 | -8.615850e-47 |
| Msa0128020 | Msa1371430 | 0.815454 | 9.168626e-52 | -8.615850e-47 |
| Msa0128020 | Msa1372760 | 0.812575 | 3.956489e-51 | -8.615850e-47 |
| Msa0128020 | Msa1384350 | 0.804101 | 2.539473e-49 | -8.615850e-47 |
| Msa0128020 | Msa1385670 | 0.802554 | 5.309842e-49 | -8.615850e-47 |
| Msa0128020 | Msa1392260 | 0.810975 | 8.823556e-51 | -8.615850e-47 |
| Msa0128020 | Msa1400190 | 0.960772 | 6.159872e-119 | -8.615850e-47 |
| Msa0128020 | Msa1402730 | 0.802897 | 4.510433e-49 | -8.615850e-47 |
| Msa0128020 | Msa1403340 | 0.808496 | 3.010749e-50 | -8.615850e-47 |
| Msa0128020 | Msa1407700 | 0.801840 | 7.445448e-49 | -8.615850e-47 |
| Msa0128020 | Msa1415640 | 0.806808 | 6.873186e-50 | -8.615850e-47 |
| Msa0128020 | Msa1416150 | 0.809434 | 1.895583e-50 | -8.615850e-47 |
| Msa0128020 | Msa1420290 | 0.814192 | 1.745795e-51 | -8.615850e-47 |
| Msa0128020 | Msa1424450 | 0.824135 | 9.509738e-54 | -8.615850e-47 |
| Msa0128020 | Msa1424750 | 0.822909 | 1.840399e-53 | -8.615850e-47 |
| Msa0128020 | Msa1426030 | 0.811733 | 6.038895e-51 | -8.615850e-47 |
| Msa0128020 | Msa1429150 | 0.800121 | 1.671685e-48 | -8.615850e-47 |
| Msa0128020 | Msa1430680 | 0.820622 | 6.222552e-53 | -8.615850e-47 |
| Msa0128020 | Msa1432420 | 0.804186 | 2.438060e-49 | -8.615850e-47 |
| Msa0128020 | Msa1435370 | 0.812406 | 4.307478e-51 | -8.615850e-47 |
| Msa0128020 | Msa1440910 | 0.808362 | 3.214898e-50 | -8.615850e-47 |
| Msa0128020 | Msa1452240 | 0.818845 | 1.584901e-52 | -8.615850e-47 |
| Msa0128020 | Msa1454120 | 0.813282 | 2.769425e-51 | -8.615850e-47 |
| Msa0128020 | Msa1454480 | 0.816872 | 4.419800e-52 | -8.615850e-47 |
| Msa0128020 | Msa1459240 | 0.805966 | 1.034051e-49 | -8.615850e-47 |
| Msa0128020 | Msa1463670 | 0.821854 | 3.235194e-53 | -8.615850e-47 |
| Msa0128020 | Msa1464940 | 0.809417 | 1.912201e-50 | -8.615850e-47 |
| Msa0128020 | Msa1466540 | 0.819776 | 9.722783e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128020 | MtrunA17_Chr8g0345501 | 65.169 | 89 | 31 | 0 | 24 | 112 | 408 | 496 | 7.13e-34 | 123 |
| Msa0128020 | MtrunA17_Chr2g0313001 | 72.500 | 40 | 11 | 0 | 7 | 46 | 1 | 40 | 2.43e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTATCTCGAGCCAAATT+TGG | 0.138676 | 1_3:-57670927 | None:intergenic |
| TTACCTCTTTATCCCAAATT+TGG | 0.184345 | 1_3:+57670914 | Msa0128020:three_prime_UTR |
| CCATCACCATCTGGAATTAT+TGG | 0.275118 | 1_3:-57669785 | None:intergenic |
| AAGAAATTGCTCACATTATA+TGG | 0.286562 | 1_3:+57670322 | Msa0128020:CDS |
| TGATTTCTTTGACTCATTCA+TGG | 0.333269 | 1_3:+57670401 | Msa0128020:CDS |
| CCGTCATGGAAGCAATTATC+AGG | 0.356730 | 1_3:+57670366 | Msa0128020:CDS |
| AACTATCTCGAGCCAAATTT+GGG | 0.363047 | 1_3:-57670926 | None:intergenic |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.423072 | 1_3:+57670626 | Msa0128020:CDS |
| ACTTGTCATGATGCATGTTA+TGG | 0.428964 | 1_3:-57670724 | None:intergenic |
| AATGTGTACATTTCAAGTTA+TGG | 0.444448 | 1_3:+57669703 | Msa0128020:exon |
| CAAACTCACCCATCACCATC+TGG | 0.453372 | 1_3:-57669794 | None:intergenic |
| CTCAGTTGATGCAAGAAGTT+CGG | 0.458850 | 1_3:+57670599 | Msa0128020:CDS |
| TACAAGGCTTAAGCAACAAT+TGG | 0.471347 | 1_3:+57670656 | Msa0128020:three_prime_UTR |
| TACATGGCAACCAGAGCATA+AGG | 0.485592 | 1_3:+57670531 | Msa0128020:CDS |
| CTAACATGGCTAGCTGAAGA+TGG | 0.497267 | 1_3:-57669737 | None:intergenic |
| TGCACATAGTAGTTCAGTTG+TGG | 0.523431 | 1_3:+57669660 | Msa0128020:five_prime_UTR |
| CCAATAATTCCAGATGGTGA+TGG | 0.531511 | 1_3:+57669785 | Msa0128020:CDS |
| GAGCCAAATTTGGGATAAAG+AGG | 0.548288 | 1_3:-57670917 | None:intergenic |
| CAATAATTCCAGATGGTGAT+GGG | 0.552654 | 1_3:+57669786 | Msa0128020:CDS |
| CAACGGTGTCTCTACTAACA+TGG | 0.557176 | 1_3:-57669751 | None:intergenic |
| CCTGATAATTGCTTCCATGA+CGG | 0.572248 | 1_3:-57670366 | None:intergenic |
| CATAGTAGTTCAGTTGTGGT+TGG | 0.585520 | 1_3:+57669664 | Msa0128020:five_prime_UTR |
| TAGAAGAGGGAAAACCGTCA+TGG | 0.601838 | 1_3:+57670352 | Msa0128020:CDS |
| TATATGGTCTCAATTAGAAG+AGG | 0.602911 | 1_3:+57670338 | Msa0128020:CDS |
| TTTCTTTAACTACCAATGTG+TGG | 0.607987 | 1_3:-57670305 | None:intergenic |
| AAAATACCAATAATTCCAGA+TGG | 0.610541 | 1_3:+57669779 | Msa0128020:CDS |
| AGTTGAAGGAGGCAACTACA+AGG | 0.610652 | 1_3:+57670640 | Msa0128020:exon |
| ATATGGTCTCAATTAGAAGA+GGG | 0.627134 | 1_3:+57670339 | Msa0128020:CDS |
| CTTGAAATGTACACATTGCG+AGG | 0.634227 | 1_3:-57669697 | None:intergenic |
| CAGGTTTGATCACCACACAT+TGG | 0.634316 | 1_3:+57670293 | Msa0128020:intron |
| GATTGAGTCAAAGTTGAAGG+AGG | 0.637853 | 1_3:+57670629 | Msa0128020:exon |
| ATGAGTCAAAGAAATCATCT+CGG | 0.652827 | 1_3:-57670395 | None:intergenic |
| CATGTTAGTAGAGACACCGT+TGG | 0.707519 | 1_3:+57669752 | Msa0128020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAAATAATCATTATTATAT+GGG | - | chr1_3:57669825-57669844 | None:intergenic | 15.0% |
| !! | TTATTTGGCTAATATAAATA+TGG | + | chr1_3:57669837-57669856 | Msa0128020:intron | 15.0% |
| !!! | ATTTTGAATTAATATCTCTA+AGG | + | chr1_3:57670152-57670171 | Msa0128020:intron | 15.0% |
| !! | CCAAATAATCATTATTATAT+GGG | - | chr1_3:57669825-57669844 | None:intergenic | 15.0% |
| !! | TTATTTGGCTAATATAAATA+TGG | + | chr1_3:57669837-57669856 | Msa0128020:intron | 15.0% |
| !!! | ATTTTGAATTAATATCTCTA+AGG | + | chr1_3:57670152-57670171 | Msa0128020:intron | 15.0% |
| !! | CCCATATAATAATGATTATT+TGG | + | chr1_3:57669822-57669841 | Msa0128020:intron | 20.0% |
| !! | GCCAAATAATCATTATTATA+TGG | - | chr1_3:57669826-57669845 | None:intergenic | 20.0% |
| !! | TATTACAGAAAAAGTTTACA+TGG | + | chr1_3:57670515-57670534 | Msa0128020:intron | 20.0% |
| !! | CCCATATAATAATGATTATT+TGG | + | chr1_3:57669822-57669841 | Msa0128020:intron | 20.0% |
| !! | GCCAAATAATCATTATTATA+TGG | - | chr1_3:57669826-57669845 | None:intergenic | 20.0% |
| !! | TATTACAGAAAAAGTTTACA+TGG | + | chr1_3:57670515-57670534 | Msa0128020:intron | 20.0% |
| !!! | AATGTGTACATTTCAAGTTA+TGG | + | chr1_3:57669703-57669722 | Msa0128020:exon | 25.0% |
| !!! | TATTGGTATTTTAGTACCAA+CGG | - | chr1_3:57669771-57669790 | None:intergenic | 25.0% |
| ! | AAAATACCAATAATTCCAGA+TGG | + | chr1_3:57669779-57669798 | Msa0128020:CDS | 25.0% |
| !! | TTGTGGTATTATGATTTTAG+TGG | + | chr1_3:57669920-57669939 | Msa0128020:intron | 25.0% |
| !! | TTTTCGTGTACATTATATTC+TGG | + | chr1_3:57669969-57669988 | Msa0128020:intron | 25.0% |
| !!! | AATTAATATCTCTAAGGCTT+TGG | + | chr1_3:57670158-57670177 | Msa0128020:intron | 25.0% |
| !!! | GTTTTTTCCTGAGAAAATAT+TGG | + | chr1_3:57670196-57670215 | Msa0128020:intron | 25.0% |
| !!! | TTGTTTGAAACACATTTTTC+AGG | + | chr1_3:57670274-57670293 | Msa0128020:intron | 25.0% |
| ! | AAGAAATTGCTCACATTATA+TGG | + | chr1_3:57670322-57670341 | Msa0128020:CDS | 25.0% |
| !!! | TTACTTAATCTGTTCTAAAG+AGG | - | chr1_3:57670465-57670484 | None:intergenic | 25.0% |
| !!! | TGCGAAAAAACTTTGAAATA+AGG | + | chr1_3:57670560-57670579 | Msa0128020:CDS | 25.0% |
| !!! | GCGAAAAAACTTTGAAATAA+GGG | + | chr1_3:57670561-57670580 | Msa0128020:CDS | 25.0% |
| !!! | CGAAAAAACTTTGAAATAAG+GGG | + | chr1_3:57670562-57670581 | Msa0128020:CDS | 25.0% |
| ! | AGCATATGCACAAAAAAAAA+TGG | - | chr1_3:57670881-57670900 | None:intergenic | 25.0% |
| !!! | TTTTGTGCATATGCTATTTT+TGG | + | chr1_3:57670886-57670905 | Msa0128020:three_prime_UTR | 25.0% |
| !!! | AATGTGTACATTTCAAGTTA+TGG | + | chr1_3:57669703-57669722 | Msa0128020:exon | 25.0% |
| !!! | TATTGGTATTTTAGTACCAA+CGG | - | chr1_3:57669771-57669790 | None:intergenic | 25.0% |
| ! | AAAATACCAATAATTCCAGA+TGG | + | chr1_3:57669779-57669798 | Msa0128020:CDS | 25.0% |
| !! | TTGTGGTATTATGATTTTAG+TGG | + | chr1_3:57669920-57669939 | Msa0128020:intron | 25.0% |
| !! | TTTTCGTGTACATTATATTC+TGG | + | chr1_3:57669969-57669988 | Msa0128020:intron | 25.0% |
| !!! | AATTAATATCTCTAAGGCTT+TGG | + | chr1_3:57670158-57670177 | Msa0128020:intron | 25.0% |
| !!! | GTTTTTTCCTGAGAAAATAT+TGG | + | chr1_3:57670196-57670215 | Msa0128020:intron | 25.0% |
| !!! | TTGTTTGAAACACATTTTTC+AGG | + | chr1_3:57670274-57670293 | Msa0128020:intron | 25.0% |
| ! | AAGAAATTGCTCACATTATA+TGG | + | chr1_3:57670322-57670341 | Msa0128020:CDS | 25.0% |
| !!! | TTACTTAATCTGTTCTAAAG+AGG | - | chr1_3:57670465-57670484 | None:intergenic | 25.0% |
| !!! | TGCGAAAAAACTTTGAAATA+AGG | + | chr1_3:57670560-57670579 | Msa0128020:CDS | 25.0% |
| !!! | GCGAAAAAACTTTGAAATAA+GGG | + | chr1_3:57670561-57670580 | Msa0128020:CDS | 25.0% |
| !!! | CGAAAAAACTTTGAAATAAG+GGG | + | chr1_3:57670562-57670581 | Msa0128020:CDS | 25.0% |
| ! | AGCATATGCACAAAAAAAAA+TGG | - | chr1_3:57670881-57670900 | None:intergenic | 25.0% |
| !!! | TTTTGTGCATATGCTATTTT+TGG | + | chr1_3:57670886-57670905 | Msa0128020:three_prime_UTR | 25.0% |
| ! | GATTCTGTTAACTTTCCTTT+TGG | + | chr1_3:57669869-57669888 | Msa0128020:intron | 30.0% |
| ! | TTTTCCTGAGAAAATATTGG+TGG | + | chr1_3:57670199-57670218 | Msa0128020:intron | 30.0% |
| CAAGTAAAGTCTTAACTCAA+AGG | - | chr1_3:57670257-57670276 | None:intergenic | 30.0% | |
| TTTCTTTAACTACCAATGTG+TGG | - | chr1_3:57670308-57670327 | None:intergenic | 30.0% | |
| TATATGGTCTCAATTAGAAG+AGG | + | chr1_3:57670338-57670357 | Msa0128020:CDS | 30.0% | |
| ATATGGTCTCAATTAGAAGA+GGG | + | chr1_3:57670339-57670358 | Msa0128020:CDS | 30.0% | |
| ATGAGTCAAAGAAATCATCT+CGG | - | chr1_3:57670398-57670417 | None:intergenic | 30.0% | |
| TGATTTCTTTGACTCATTCA+TGG | + | chr1_3:57670401-57670420 | Msa0128020:CDS | 30.0% | |
| ! | GATTCTGTTAACTTTCCTTT+TGG | + | chr1_3:57669869-57669888 | Msa0128020:intron | 30.0% |
| ! | TTTTCCTGAGAAAATATTGG+TGG | + | chr1_3:57670199-57670218 | Msa0128020:intron | 30.0% |
| CAAGTAAAGTCTTAACTCAA+AGG | - | chr1_3:57670257-57670276 | None:intergenic | 30.0% | |
| TTTCTTTAACTACCAATGTG+TGG | - | chr1_3:57670308-57670327 | None:intergenic | 30.0% | |
| TATATGGTCTCAATTAGAAG+AGG | + | chr1_3:57670338-57670357 | Msa0128020:CDS | 30.0% | |
| ATATGGTCTCAATTAGAAGA+GGG | + | chr1_3:57670339-57670358 | Msa0128020:CDS | 30.0% | |
| ATGAGTCAAAGAAATCATCT+CGG | - | chr1_3:57670398-57670417 | None:intergenic | 30.0% | |
| TGATTTCTTTGACTCATTCA+TGG | + | chr1_3:57670401-57670420 | Msa0128020:CDS | 30.0% | |
| CAATAATTCCAGATGGTGAT+GGG | + | chr1_3:57669786-57669805 | Msa0128020:CDS | 35.0% | |
| ! | GCATTGTTACTTGATCCAAA+AGG | - | chr1_3:57669887-57669906 | None:intergenic | 35.0% |
| GTTGCTGAACATGCTATATA+TGG | + | chr1_3:57670055-57670074 | Msa0128020:intron | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | + | chr1_3:57670626-57670645 | Msa0128020:CDS | 35.0% | |
| TACAAGGCTTAAGCAACAAT+TGG | + | chr1_3:57670656-57670675 | Msa0128020:three_prime_UTR | 35.0% | |
| ACTTGTCATGATGCATGTTA+TGG | - | chr1_3:57670727-57670746 | None:intergenic | 35.0% | |
| CAATAATTCCAGATGGTGAT+GGG | + | chr1_3:57669786-57669805 | Msa0128020:CDS | 35.0% | |
| ! | GCATTGTTACTTGATCCAAA+AGG | - | chr1_3:57669887-57669906 | None:intergenic | 35.0% |
| GTTGCTGAACATGCTATATA+TGG | + | chr1_3:57670055-57670074 | Msa0128020:intron | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | + | chr1_3:57670626-57670645 | Msa0128020:CDS | 35.0% | |
| TACAAGGCTTAAGCAACAAT+TGG | + | chr1_3:57670656-57670675 | Msa0128020:three_prime_UTR | 35.0% | |
| ACTTGTCATGATGCATGTTA+TGG | - | chr1_3:57670727-57670746 | None:intergenic | 35.0% | |
| TGCACATAGTAGTTCAGTTG+TGG | + | chr1_3:57669660-57669679 | Msa0128020:five_prime_UTR | 40.0% | |
| CATAGTAGTTCAGTTGTGGT+TGG | + | chr1_3:57669664-57669683 | Msa0128020:five_prime_UTR | 40.0% | |
| CTTGAAATGTACACATTGCG+AGG | - | chr1_3:57669700-57669719 | None:intergenic | 40.0% | |
| ! | CCATCACCATCTGGAATTAT+TGG | - | chr1_3:57669788-57669807 | None:intergenic | 40.0% |
| CCAATAATTCCAGATGGTGA+TGG | + | chr1_3:57669785-57669804 | Msa0128020:CDS | 40.0% | |
| !! | ATCTCTAAGGCTTTGGAACA+TGG | + | chr1_3:57670165-57670184 | Msa0128020:intron | 40.0% |
| ! | TGCACCACCAATATTTTCTC+AGG | - | chr1_3:57670206-57670225 | None:intergenic | 40.0% |
| GTGCAAGTAGTTAGTTGTGT+TGG | + | chr1_3:57670221-57670240 | Msa0128020:intron | 40.0% | |
| CCTGATAATTGCTTCCATGA+CGG | - | chr1_3:57670369-57670388 | None:intergenic | 40.0% | |
| ! | CTCAGTTGATGCAAGAAGTT+CGG | + | chr1_3:57670599-57670618 | Msa0128020:CDS | 40.0% |
| GATTGAGTCAAAGTTGAAGG+AGG | + | chr1_3:57670629-57670648 | Msa0128020:exon | 40.0% | |
| TGCACATAGTAGTTCAGTTG+TGG | + | chr1_3:57669660-57669679 | Msa0128020:five_prime_UTR | 40.0% | |
| CATAGTAGTTCAGTTGTGGT+TGG | + | chr1_3:57669664-57669683 | Msa0128020:five_prime_UTR | 40.0% | |
| CTTGAAATGTACACATTGCG+AGG | - | chr1_3:57669700-57669719 | None:intergenic | 40.0% | |
| ! | CCATCACCATCTGGAATTAT+TGG | - | chr1_3:57669788-57669807 | None:intergenic | 40.0% |
| CCAATAATTCCAGATGGTGA+TGG | + | chr1_3:57669785-57669804 | Msa0128020:CDS | 40.0% | |
| !! | ATCTCTAAGGCTTTGGAACA+TGG | + | chr1_3:57670165-57670184 | Msa0128020:intron | 40.0% |
| ! | TGCACCACCAATATTTTCTC+AGG | - | chr1_3:57670206-57670225 | None:intergenic | 40.0% |
| GTGCAAGTAGTTAGTTGTGT+TGG | + | chr1_3:57670221-57670240 | Msa0128020:intron | 40.0% | |
| CCTGATAATTGCTTCCATGA+CGG | - | chr1_3:57670369-57670388 | None:intergenic | 40.0% | |
| ! | CTCAGTTGATGCAAGAAGTT+CGG | + | chr1_3:57670599-57670618 | Msa0128020:CDS | 40.0% |
| GATTGAGTCAAAGTTGAAGG+AGG | + | chr1_3:57670629-57670648 | Msa0128020:exon | 40.0% | |
| ! | CTAACATGGCTAGCTGAAGA+TGG | - | chr1_3:57669740-57669759 | None:intergenic | 45.0% |
| CAACGGTGTCTCTACTAACA+TGG | - | chr1_3:57669754-57669773 | None:intergenic | 45.0% | |
| CATGTTAGTAGAGACACCGT+TGG | + | chr1_3:57669752-57669771 | Msa0128020:CDS | 45.0% | |
| ATGCAAGACTGTTGTGCTTG+TGG | + | chr1_3:57669903-57669922 | Msa0128020:intron | 45.0% | |
| !! | CTAAGGCTTTGGAACATGGT+TGG | + | chr1_3:57670169-57670188 | Msa0128020:intron | 45.0% |
| CAGGTTTGATCACCACACAT+TGG | + | chr1_3:57670293-57670312 | Msa0128020:intron | 45.0% | |
| TAGAAGAGGGAAAACCGTCA+TGG | + | chr1_3:57670352-57670371 | Msa0128020:CDS | 45.0% | |
| CCGTCATGGAAGCAATTATC+AGG | + | chr1_3:57670366-57670385 | Msa0128020:CDS | 45.0% | |
| TACATGGCAACCAGAGCATA+AGG | + | chr1_3:57670531-57670550 | Msa0128020:CDS | 45.0% | |
| ! | CGCACTTTTACCTTATGCTC+TGG | - | chr1_3:57670544-57670563 | None:intergenic | 45.0% |
| AGTTGAAGGAGGCAACTACA+AGG | + | chr1_3:57670640-57670659 | Msa0128020:exon | 45.0% | |
| ! | CTAACATGGCTAGCTGAAGA+TGG | - | chr1_3:57669740-57669759 | None:intergenic | 45.0% |
| CAACGGTGTCTCTACTAACA+TGG | - | chr1_3:57669754-57669773 | None:intergenic | 45.0% | |
| CATGTTAGTAGAGACACCGT+TGG | + | chr1_3:57669752-57669771 | Msa0128020:CDS | 45.0% | |
| ATGCAAGACTGTTGTGCTTG+TGG | + | chr1_3:57669903-57669922 | Msa0128020:intron | 45.0% | |
| !! | CTAAGGCTTTGGAACATGGT+TGG | + | chr1_3:57670169-57670188 | Msa0128020:intron | 45.0% |
| CAGGTTTGATCACCACACAT+TGG | + | chr1_3:57670293-57670312 | Msa0128020:intron | 45.0% | |
| TAGAAGAGGGAAAACCGTCA+TGG | + | chr1_3:57670352-57670371 | Msa0128020:CDS | 45.0% | |
| CCGTCATGGAAGCAATTATC+AGG | + | chr1_3:57670366-57670385 | Msa0128020:CDS | 45.0% | |
| TACATGGCAACCAGAGCATA+AGG | + | chr1_3:57670531-57670550 | Msa0128020:CDS | 45.0% | |
| ! | CGCACTTTTACCTTATGCTC+TGG | - | chr1_3:57670544-57670563 | None:intergenic | 45.0% |
| AGTTGAAGGAGGCAACTACA+AGG | + | chr1_3:57670640-57670659 | Msa0128020:exon | 45.0% | |
| CAAACTCACCCATCACCATC+TGG | - | chr1_3:57669797-57669816 | None:intergenic | 50.0% | |
| CAAACTCACCCATCACCATC+TGG | - | chr1_3:57669797-57669816 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 57669598 | 57670934 | 57669598 | ID=Msa0128020;Name=Msa0128020 |
| chr1_3 | mRNA | 57669598 | 57670934 | 57669598 | ID=Msa0128020-mRNA-1;Parent=Msa0128020;Name=Msa0128020-mRNA-1;_AED=0.28;_eAED=0.28;_QI=106|1|1|1|1|1|3|289|117 |
| chr1_3 | exon | 57669598 | 57669807 | 57669598 | ID=Msa0128020-mRNA-1:exon:18337;Parent=Msa0128020-mRNA-1 |
| chr1_3 | exon | 57670296 | 57670422 | 57670296 | ID=Msa0128020-mRNA-1:exon:18338;Parent=Msa0128020-mRNA-1 |
| chr1_3 | exon | 57670523 | 57670934 | 57670523 | ID=Msa0128020-mRNA-1:exon:18339;Parent=Msa0128020-mRNA-1 |
| chr1_3 | five_prime_UTR | 57669598 | 57669703 | 57669598 | ID=Msa0128020-mRNA-1:five_prime_utr;Parent=Msa0128020-mRNA-1 |
| chr1_3 | CDS | 57669704 | 57669807 | 57669704 | ID=Msa0128020-mRNA-1:cds;Parent=Msa0128020-mRNA-1 |
| chr1_3 | CDS | 57670296 | 57670422 | 57670296 | ID=Msa0128020-mRNA-1:cds;Parent=Msa0128020-mRNA-1 |
| chr1_3 | CDS | 57670523 | 57670645 | 57670523 | ID=Msa0128020-mRNA-1:cds;Parent=Msa0128020-mRNA-1 |
| chr1_3 | three_prime_UTR | 57670646 | 57670934 | 57670646 | ID=Msa0128020-mRNA-1:three_prime_utr;Parent=Msa0128020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
