Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080050 | sp|Q6A332|ALY3_ARATH | 42.343 | 1195 | 551 | 27 | 1 | 1120 | 1 | 1132 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080050 | A0A072VML3 | 97.418 | 1123 | 25 | 2 | 1 | 1120 | 1 | 1122 | 0.0 | 2264 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0080050 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0080050 | 0.831879 | 1.299711e-55 | -8.615850e-47 |
| Msa0003270 | Msa0080050 | 0.811927 | 5.481402e-51 | -8.615850e-47 |
| Msa0031180 | Msa0080050 | 0.815702 | 8.072585e-52 | -8.615850e-47 |
| Msa0032900 | Msa0080050 | 0.983822 | 8.345447e-159 | -8.615850e-47 |
| Msa0032940 | Msa0080050 | 0.983604 | 3.362039e-158 | -8.615850e-47 |
| Msa0045340 | Msa0080050 | 0.802311 | 5.958808e-49 | -8.615850e-47 |
| Msa0054820 | Msa0080050 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
| Msa0055600 | Msa0080050 | 0.824060 | 9.902458e-54 | -8.615850e-47 |
| Msa0055660 | Msa0080050 | 0.802051 | 6.738954e-49 | -8.615850e-47 |
| Msa0061040 | Msa0080050 | 0.805168 | 1.520311e-49 | -8.615850e-47 |
| Msa0078480 | Msa0080050 | 0.812303 | 4.537030e-51 | -8.615850e-47 |
| Msa0080050 | Msa0096580 | 0.829522 | 4.910049e-55 | -8.615850e-47 |
| Msa0080050 | Msa0100160 | 0.815710 | 8.041344e-52 | -8.615850e-47 |
| Msa0080050 | Msa0131290 | 0.800297 | 1.539903e-48 | -8.615850e-47 |
| Msa0080050 | Msa0144780 | 0.824495 | 7.827450e-54 | -8.615850e-47 |
| Msa0080050 | Msa0173590 | 0.986156 | 7.413414e-166 | -8.615850e-47 |
| Msa0080050 | Msa0202730 | 0.805129 | 1.549493e-49 | -8.615850e-47 |
| Msa0080050 | Msa0205010 | 0.802559 | 5.297710e-49 | -8.615850e-47 |
| Msa0080050 | Msa0227230 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
| Msa0080050 | Msa0237200 | 0.816599 | 5.089050e-52 | -8.615850e-47 |
| Msa0080050 | Msa0271790 | 0.809944 | 1.472856e-50 | -8.615850e-47 |
| Msa0080050 | Msa0274970 | 0.825229 | 5.252984e-54 | -8.615850e-47 |
| Msa0080050 | Msa0310430 | 0.804469 | 2.127942e-49 | -8.615850e-47 |
| Msa0080050 | Msa0310660 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0080050 | Msa0315680 | 0.821578 | 3.748304e-53 | -8.615850e-47 |
| Msa0080050 | Msa0377440 | 0.812908 | 3.346202e-51 | -8.615850e-47 |
| Msa0080050 | Msa0378970 | 0.807531 | 4.829974e-50 | -8.615850e-47 |
| Msa0080050 | Msa0392270 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0080050 | Msa0417650 | 0.829329 | 5.471920e-55 | -8.615850e-47 |
| Msa0080050 | Msa0417730 | 0.808167 | 3.537612e-50 | -8.615850e-47 |
| Msa0080050 | Msa0428050 | 0.806857 | 6.708269e-50 | -8.615850e-47 |
| Msa0080050 | Msa0430060 | 0.824386 | 8.300482e-54 | -8.615850e-47 |
| Msa0080050 | Msa0430150 | 0.819806 | 9.572871e-53 | -8.615850e-47 |
| Msa0080050 | Msa0474390 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0080050 | Msa0480780 | 0.809971 | 1.453672e-50 | -8.615850e-47 |
| Msa0080050 | Msa0481030 | 0.818241 | 2.171672e-52 | -8.615850e-47 |
| Msa0080050 | Msa0500470 | 0.813054 | 3.108330e-51 | -8.615850e-47 |
| Msa0080050 | Msa0517650 | 0.805003 | 1.646109e-49 | -8.615850e-47 |
| Msa0080050 | Msa0549280 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0080050 | Msa0629430 | 0.812529 | 4.050614e-51 | -8.615850e-47 |
| Msa0080050 | Msa0642250 | 0.815314 | 9.848128e-52 | -8.615850e-47 |
| Msa0080050 | Msa0652690 | 0.812369 | 4.390066e-51 | -8.615850e-47 |
| Msa0080050 | Msa0763920 | 0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa0080050 | Msa0945240 | 0.809158 | 2.172838e-50 | -8.615850e-47 |
| Msa0080050 | Msa0945510 | 0.994029 | 5.015182e-204 | -8.615850e-47 |
| Msa0080050 | Msa0958030 | 0.823613 | 1.260471e-53 | -8.615850e-47 |
| Msa0080050 | Msa1074010 | 0.813809 | 2.120460e-51 | -8.615850e-47 |
| Msa0080050 | Msa1227320 | 0.823584 | 1.280556e-53 | -8.615850e-47 |
| Msa0080050 | Msa1320820 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0080050 | Msa1340130 | 0.803335 | 3.660810e-49 | -8.615850e-47 |
| Msa0080050 | Msa1359560 | 0.826618 | 2.457359e-54 | -8.615850e-47 |
| Msa0080050 | Msa1372290 | 0.812388 | 4.348553e-51 | -8.615850e-47 |
| Msa0080050 | Msa1376130 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0080050 | Msa1401460 | 0.802449 | 5.580516e-49 | -8.615850e-47 |
| Msa0080050 | Msa1424780 | 0.818732 | 1.681443e-52 | -8.615850e-47 |
| Msa0080050 | Msa1438520 | 0.802301 | 5.988057e-49 | -8.615850e-47 |
| Msa0080050 | Msa1450720 | 0.800615 | 1.326098e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080050 | MtrunA17_Chr1g0191931 | 97.418 | 1123 | 25 | 2 | 1 | 1120 | 1 | 1122 | 0.0 | 2264 |
| Msa0080050 | MtrunA17_Chr4g0066971 | 43.647 | 1212 | 542 | 34 | 1 | 1120 | 1 | 1163 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080050 | AT3G21430.4 | 42.628 | 1187 | 555 | 26 | 1 | 1120 | 1 | 1128 | 0.0 | 782 |
| Msa0080050 | AT3G21430.3 | 42.628 | 1187 | 555 | 26 | 1 | 1120 | 1 | 1128 | 0.0 | 782 |
| Msa0080050 | AT3G21430.2 | 42.343 | 1195 | 551 | 27 | 1 | 1120 | 1 | 1132 | 0.0 | 781 |
| Msa0080050 | AT3G05380.4 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
| Msa0080050 | AT3G05380.4 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
| Msa0080050 | AT3G05380.2 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
| Msa0080050 | AT3G05380.2 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
| Msa0080050 | AT3G05380.5 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
| Msa0080050 | AT3G05380.5 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
| Msa0080050 | AT3G05380.1 | 46.440 | 913 | 396 | 25 | 1 | 852 | 1 | 881 | 0.0 | 662 |
| Msa0080050 | AT3G05380.1 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 886 | 1051 | 2.38e-44 | 175 |
| Msa0080050 | AT3G05380.3 | 44.538 | 833 | 373 | 22 | 80 | 852 | 1 | 804 | 0.0 | 573 |
| Msa0080050 | AT3G05380.3 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 809 | 974 | 1.63e-44 | 176 |
| Msa0080050 | AT5G27610.1 | 44.114 | 807 | 318 | 25 | 1 | 770 | 1 | 711 | 5.06e-174 | 537 |
| Msa0080050 | AT5G27610.1 | 43.011 | 186 | 99 | 3 | 935 | 1120 | 792 | 970 | 1.04e-31 | 134 |
Find 277 sgRNAs with CRISPR-Local
Find 800 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATGAATCTCTCTTGTTT+TGG | 0.149228 | 1_2:-58257296 | None:intergenic |
| TAGCTGTTTGTCATCTTATT+TGG | 0.158728 | 1_2:+58256835 | Msa0080050:CDS |
| GAAGAAGTTGTCTAATAAAT+TGG | 0.161696 | 1_2:+58251643 | Msa0080050:CDS |
| GATTAATAACGGCAATATTA+AGG | 0.164204 | 1_2:+58260995 | Msa0080050:three_prime_UTR |
| CGTTATTAATCAACAGCTTT+TGG | 0.191177 | 1_2:-58260983 | None:intergenic |
| ATTAATGGAAATTCAAGTTT+TGG | 0.224585 | 1_2:+58258046 | Msa0080050:CDS |
| CGTCTACTTCTTTGTTTAGT+TGG | 0.235444 | 1_2:-58256604 | None:intergenic |
| TTCTTTGAAGGAAAATAATA+TGG | 0.244666 | 1_2:+58254160 | Msa0080050:CDS |
| TTAAACATTCTATGCCATTT+TGG | 0.249911 | 1_2:-58259381 | None:intergenic |
| AGAGAGAGAAAGAGAGAGAT+AGG | 0.252798 | 1_2:-58249517 | None:intergenic |
| ATTTGAATTTCTCTGTAAAT+AGG | 0.271279 | 1_2:-58260774 | None:intergenic |
| AGCACAGAGGTTACCAATAT+TGG | 0.278915 | 1_2:-58258950 | None:intergenic |
| GTACTCCACAAATTCTCTTT+TGG | 0.279992 | 1_2:-58256915 | None:intergenic |
| AGTATAGAACCACATATTAA+TGG | 0.291083 | 1_2:+58258031 | Msa0080050:CDS |
| TTCGAGTATCGCACGGTTGC+AGG | 0.302283 | 1_2:-58260746 | None:intergenic |
| CCTATGTGATACAAACTAAA+TGG | 0.302689 | 1_2:-58260893 | None:intergenic |
| TGATGAATTCAACTCCTAAC+TGG | 0.311762 | 1_2:-58257372 | None:intergenic |
| TTGACCGTCTTTATTTGTTT+TGG | 0.312836 | 1_2:-58256496 | None:intergenic |
| AAAGCGTGCTCTAGATAAAA+AGG | 0.313137 | 1_2:+58259050 | Msa0080050:CDS |
| TTGGAGGTAATTCTGTCAAT+AGG | 0.317043 | 1_2:+58254252 | Msa0080050:CDS |
| GTCACTTCCCAGGCCAATAT+TGG | 0.328742 | 1_2:+58258937 | Msa0080050:CDS |
| TCAGAATCTTTGTGCAGTTT+CGG | 0.329467 | 1_2:-58260303 | None:intergenic |
| TGTCTAGGAAGGGTGCATTT+AGG | 0.329734 | 1_2:+58261210 | Msa0080050:three_prime_UTR |
| AATGCTGGATGCTGCATTTC+AGG | 0.332422 | 1_2:+58259748 | Msa0080050:CDS |
| TACTAGTTCCTTGATGGATA+TGG | 0.336948 | 1_2:+58254001 | Msa0080050:CDS |
| TAGAGATACTAGTTCCTTGA+TGG | 0.342926 | 1_2:+58253995 | Msa0080050:CDS |
| TTGAGTGGAGTGTCATAAAA+AGG | 0.349014 | 1_2:+58256981 | Msa0080050:CDS |
| ATTAATAACGGCAATATTAA+GGG | 0.350075 | 1_2:+58260996 | Msa0080050:three_prime_UTR |
| GGCATATTGGAAAACCAAAA+TGG | 0.350448 | 1_2:+58259367 | Msa0080050:CDS |
| AAAGATGCTATTACGAAGAT+TGG | 0.351072 | 1_2:+58260129 | Msa0080050:CDS |
| TCTGTCAATAGGGATGTCTT+TGG | 0.351786 | 1_2:+58254263 | Msa0080050:CDS |
| ATGGCCATCAAAATTTGCTT+TGG | 0.355548 | 1_2:-58259630 | None:intergenic |
| AGCCTCGTGCTGTTGGAAAA+AGG | 0.356186 | 1_2:+58253470 | Msa0080050:CDS |
| TTCCATTTGCTGATAAGATA+TGG | 0.360437 | 1_2:+58255535 | Msa0080050:CDS |
| TAGAGAGAGGCAACCATCAC+TGG | 0.361044 | 1_2:-58252791 | None:intergenic |
| CACGAGCTGTCTCTGACATT+TGG | 0.361609 | 1_2:-58253890 | None:intergenic |
| AGATGGACTTCCAACAGATT+TGG | 0.362036 | 1_2:+58257231 | Msa0080050:CDS |
| AAGAAAATTTCACGAATTGA+TGG | 0.368949 | 1_2:-58261131 | None:intergenic |
| GGCTACATTAACCATGATTC+AGG | 0.369905 | 1_2:+58260371 | Msa0080050:CDS |
| CTTGGATGCTTTGCAAACTT+TGG | 0.371982 | 1_2:+58254431 | Msa0080050:CDS |
| AGCTCCTATTCAGTAGCTCT+TGG | 0.373329 | 1_2:-58261029 | None:intergenic |
| ACTCTCAAAAGAAAGATGAT+AGG | 0.373372 | 1_2:+58253515 | Msa0080050:CDS |
| ACTGTCATTGAAATCATTAA+AGG | 0.374232 | 1_2:+58259704 | Msa0080050:CDS |
| GAAAGCAGGGGAGCTGAAAA+TGG | 0.374259 | 1_2:+58253963 | Msa0080050:CDS |
| GCTTCGGGCATATTATCTAA+TGG | 0.375299 | 1_2:-58257968 | None:intergenic |
| ATCTGCCTCCTCAAAGCTTC+GGG | 0.377312 | 1_2:-58257983 | None:intergenic |
| TAGGGATGAGAGCTAAAATC+TGG | 0.378728 | 1_2:-58260818 | None:intergenic |
| TCATTCTTTCTCCCTTCAAC+TGG | 0.380375 | 1_2:-58255350 | None:intergenic |
| ATGGCTTGTTGATGTTGATT+CGG | 0.382537 | 1_2:-58255403 | None:intergenic |
| CGCGGAATCACTTTCACTCT+TGG | 0.385290 | 1_2:+58249608 | Msa0080050:five_prime_UTR |
| GAGGGGACAGCTTCTGTTGT+AGG | 0.386769 | 1_2:+58252237 | Msa0080050:CDS |
| GAGCTTCGAAATGCTAATAA+TGG | 0.388504 | 1_2:+58259346 | Msa0080050:CDS |
| AAATGCTAATAATGGCATAT+TGG | 0.389348 | 1_2:+58259354 | Msa0080050:CDS |
| CTGAAGAAAAGACGCATTGA+TGG | 0.393599 | 1_2:+58252814 | Msa0080050:CDS |
| TGGCCATCAAAATTTGCTTT+GGG | 0.396560 | 1_2:-58259629 | None:intergenic |
| CCGCGGCTGTTACTGATTGT+AGG | 0.401511 | 1_2:-58249590 | None:intergenic |
| AGCTTGAAGTCTACTGTTGA+TGG | 0.408517 | 1_2:+58253565 | Msa0080050:CDS |
| CAGTTCGATCGTCCCCAGTT+AGG | 0.409738 | 1_2:+58257358 | Msa0080050:CDS |
| GTCTTTAATTACCTGAATCA+TGG | 0.409754 | 1_2:-58260382 | None:intergenic |
| TGGCTTGTTGATGTTGATTC+GGG | 0.410687 | 1_2:-58255402 | None:intergenic |
| ACACTTCTAGATTTCCTTGT+CGG | 0.411329 | 1_2:-58250870 | None:intergenic |
| GAGAAGATATAATTCTAAGT+AGG | 0.419321 | 1_2:-58260837 | None:intergenic |
| TGGAGGTAATTCTGTCAATA+GGG | 0.420535 | 1_2:+58254253 | Msa0080050:CDS |
| AATCTGCCTCCTCAAAGCTT+CGG | 0.421550 | 1_2:-58257984 | None:intergenic |
| TTCCATATCTTATCAGCAAA+TGG | 0.431294 | 1_2:-58255537 | None:intergenic |
| TACGAAGATTGGGCAGGCAT+TGG | 0.432224 | 1_2:+58260140 | Msa0080050:CDS |
| ACACGTTGTCCAACATATAA+TGG | 0.433131 | 1_2:-58257259 | None:intergenic |
| GAGGCAACGCAATACCTATA+CGG | 0.433200 | 1_2:+58259580 | Msa0080050:CDS |
| AAGAGCTTCCACCATTTCAA+TGG | 0.436695 | 1_2:-58251928 | None:intergenic |
| AAGAAGTTGTCTAATAAATT+GGG | 0.437836 | 1_2:+58251644 | Msa0080050:CDS |
| GCCGCGAAACTTGAATATAA+AGG | 0.440993 | 1_2:-58249474 | None:intergenic |
| CATGAAGTGATGAGCTCAAA+TGG | 0.441310 | 1_2:-58260345 | None:intergenic |
| CCGTCTTCTGAAGTAGAATC+TGG | 0.447167 | 1_2:+58254474 | Msa0080050:CDS |
| AAGCTCTTTACAATATGAAT+CGG | 0.447230 | 1_2:+58251943 | Msa0080050:CDS |
| ACAGAAAGCATGGTAAAGAT+TGG | 0.448397 | 1_2:+58251711 | Msa0080050:CDS |
| GAGCCAGCTCCATCTTTCTC+AGG | 0.448770 | 1_2:-58250927 | None:intergenic |
| CTTGAATTTCCATTAATATG+TGG | 0.449653 | 1_2:-58258040 | None:intergenic |
| ACTTGTTTCTGCAGTTCCCT+TGG | 0.450351 | 1_2:+58257100 | Msa0080050:intron |
| CTGATACCATGCTTCAATTG+AGG | 0.455978 | 1_2:+58259561 | Msa0080050:CDS |
| CACTCAACACGAGTTAGCCT+TGG | 0.457331 | 1_2:-58256965 | None:intergenic |
| CATTGCATGTGCCTGTAGCC+TGG | 0.458879 | 1_2:-58259729 | None:intergenic |
| GTTTGCCAAAAGAGAATTTG+TGG | 0.458990 | 1_2:+58256910 | Msa0080050:CDS |
| AATATCTGAGCCACATCAGC+TGG | 0.464887 | 1_2:-58260705 | None:intergenic |
| CACAGAAGCATCGAGAAACT+TGG | 0.464933 | 1_2:-58253913 | None:intergenic |
| AGAAGATATAATTCTAAGTA+GGG | 0.465953 | 1_2:-58260836 | None:intergenic |
| AAAGAAAGAGTGGAAAATGT+TGG | 0.469922 | 1_2:+58254074 | Msa0080050:CDS |
| TGCTCAGAGCCGGGATAGAA+TGG | 0.470304 | 1_2:+58253702 | Msa0080050:CDS |
| TGGAAGGTAGTCTTGAAAGC+AGG | 0.470580 | 1_2:+58253949 | Msa0080050:CDS |
| TGATGACATTATTAATGTCT+AGG | 0.471983 | 1_2:+58261195 | Msa0080050:three_prime_UTR |
| AGAATCACGTCTCCAGTTGA+AGG | 0.473764 | 1_2:+58255338 | Msa0080050:intron |
| TTTCTCGATGCTTCTGTGGA+TGG | 0.475165 | 1_2:+58253918 | Msa0080050:CDS |
| TATCACAGGCAACCTGTACT+TGG | 0.476810 | 1_2:-58260190 | None:intergenic |
| AGTTCTCTCCTGCTCAGAGC+CGG | 0.477289 | 1_2:+58253692 | Msa0080050:CDS |
| ATGGAAGGAACGAGCACTGC+TGG | 0.477901 | 1_2:+58254020 | Msa0080050:CDS |
| GACTATGCAGCTCTTTAGAA+AGG | 0.478944 | 1_2:-58261165 | None:intergenic |
| TGGAAGTAACAGACTGAGAC+TGG | 0.479884 | 1_2:-58252771 | None:intergenic |
| GATATTTCTCCTGAGAAAGA+TGG | 0.480654 | 1_2:+58250918 | Msa0080050:CDS |
| GAATCCAAGAGCTACTGAAT+AGG | 0.481206 | 1_2:+58261025 | Msa0080050:three_prime_UTR |
| ATAATATGCCCGAAGCTTTG+AGG | 0.481922 | 1_2:+58257975 | Msa0080050:CDS |
| GAGCACTGCTGGAGTTCCTA+AGG | 0.483645 | 1_2:+58254031 | Msa0080050:CDS |
| CATTAAAGGATCCAGGCTAC+AGG | 0.484028 | 1_2:+58259718 | Msa0080050:CDS |
| CAAAAGCTGTTGATTAATAA+CGG | 0.484703 | 1_2:+58260984 | Msa0080050:three_prime_UTR |
| ATTCTATCCCGGCTCTGAGC+AGG | 0.485679 | 1_2:-58253700 | None:intergenic |
| TGGCAGAGAGGTTTCCGTAT+AGG | 0.486136 | 1_2:-58259594 | None:intergenic |
| GCTACAGGCACATGCAATGC+TGG | 0.487202 | 1_2:+58259733 | Msa0080050:CDS |
| ACCTTTATATTCAAGTTTCG+CGG | 0.487436 | 1_2:+58249473 | Msa0080050:five_prime_UTR |
| TTGAAATCATTAAAGGATCC+AGG | 0.488460 | 1_2:+58259711 | Msa0080050:CDS |
| AATGGTCTTGCCAAATCTGT+TGG | 0.489638 | 1_2:-58257241 | None:intergenic |
| CCTTTACTTAACGATGCATC+TGG | 0.490660 | 1_2:+58260279 | Msa0080050:CDS |
| TTGGGATCTCAGTGGAGCAA+GGG | 0.491437 | 1_2:+58251662 | Msa0080050:CDS |
| GCATGCAGCGGCACTGAAGA+AGG | 0.491447 | 1_2:+58254125 | Msa0080050:CDS |
| AGAGGTTACCAATATTGGCC+TGG | 0.491630 | 1_2:-58258945 | None:intergenic |
| CATCTTATTTGGTTCGCAGA+TGG | 0.495359 | 1_2:+58256846 | Msa0080050:CDS |
| GGAGAGAGAAAACAAGAGAA+AGG | 0.497037 | 1_2:-58249548 | None:intergenic |
| AACAGATGAAATCCACGCCT+TGG | 0.497756 | 1_2:+58254413 | Msa0080050:intron |
| GCACGGTTGCAGGCTGGTAA+CGG | 0.498043 | 1_2:-58260736 | None:intergenic |
| CAGAGAAATTCAAATGTGCA+TGG | 0.498649 | 1_2:+58260782 | Msa0080050:CDS |
| GGTCTGCAGCCTCGTGCTGT+TGG | 0.500748 | 1_2:+58253463 | Msa0080050:intron |
| ACGTAATAGATCCATTGAAA+TGG | 0.501185 | 1_2:+58251917 | Msa0080050:CDS |
| TCAGTATACTAAAGGATCAA+TGG | 0.502629 | 1_2:+58250845 | Msa0080050:intron |
| GAACTAACTTCACTTAAAAG+TGG | 0.502840 | 1_2:-58256580 | None:intergenic |
| GAGAGAGAAAGAGAGAGATA+GGG | 0.504017 | 1_2:-58249516 | None:intergenic |
| TAATAAGCACTCTACCCAAA+AGG | 0.509532 | 1_2:+58256696 | Msa0080050:CDS |
| GACATTATTAATGTCTAGGA+AGG | 0.510569 | 1_2:+58261199 | Msa0080050:three_prime_UTR |
| CAGTCTGTTACTTCCAGTGA+TGG | 0.510709 | 1_2:+58252778 | Msa0080050:CDS |
| GACAGATCATTATAATGTCC+TGG | 0.510737 | 1_2:+58252275 | Msa0080050:CDS |
| GTCAATAGGGATGTCTTTGG+AGG | 0.511224 | 1_2:+58254266 | Msa0080050:CDS |
| AGTACAGGTTGCCTGTGATA+AGG | 0.511473 | 1_2:+58260193 | Msa0080050:CDS |
| CTCTCAAAAGAAAGATGATA+GGG | 0.511587 | 1_2:+58253516 | Msa0080050:CDS |
| GAAGAGGGGCGTACCTTCAC+AGG | 0.513156 | 1_2:-58258091 | None:intergenic |
| AAGATGCTATTACGAAGATT+GGG | 0.513873 | 1_2:+58260130 | Msa0080050:CDS |
| TTTGCTTTGGGCTTCATCCA+TGG | 0.515055 | 1_2:-58259617 | None:intergenic |
| GCTAAAGGAAGCCAGTGGAC+AGG | 0.515599 | 1_2:+58259450 | Msa0080050:CDS |
| TGGTTCTATACTCGTAAAAG+AGG | 0.516423 | 1_2:-58258020 | None:intergenic |
| TCTATCTACCCTTTGTGTGA+AGG | 0.516911 | 1_2:+58261067 | Msa0080050:three_prime_UTR |
| GTTCTCTCCTGCTCAGAGCC+GGG | 0.518889 | 1_2:+58253693 | Msa0080050:CDS |
| CACGGTACTTGTAGAGCTAA+AGG | 0.519139 | 1_2:+58259435 | Msa0080050:CDS |
| TACTTAAATCATGTTGGACT+AGG | 0.519442 | 1_2:+58256935 | Msa0080050:CDS |
| AGGAAGAGAGTGATAGTGAA+AGG | 0.519581 | 1_2:+58252665 | Msa0080050:intron |
| CATTATTCTGAGCTGCGGAC+TGG | 0.520480 | 1_2:+58257202 | Msa0080050:CDS |
| AGCTCTTTACAATATGAATC+GGG | 0.520904 | 1_2:+58251944 | Msa0080050:CDS |
| ATAGAACTATCCGACATACT+AGG | 0.521403 | 1_2:-58259662 | None:intergenic |
| GGAAGAGAGTGATAGTGAAA+GGG | 0.522040 | 1_2:+58252666 | Msa0080050:intron |
| TTACAGAAAGAAAGAAAGAG+TGG | 0.522065 | 1_2:+58254064 | Msa0080050:CDS |
| GTGGAGTACTTAAATCATGT+TGG | 0.522193 | 1_2:+58256929 | Msa0080050:CDS |
| TTCTGTTCTCCTCTCCTATG+TGG | 0.525089 | 1_2:-58253670 | None:intergenic |
| ACAAAGGGTAGATAGATAAC+CGG | 0.526358 | 1_2:-58261060 | None:intergenic |
| CAAAGTTTGCAAAGCATCCA+AGG | 0.526548 | 1_2:-58254430 | None:intergenic |
| GGAAATTATCAGCTTGATGA+CGG | 0.526857 | 1_2:+58254095 | Msa0080050:CDS |
| GAAGCCACATGCCTGTCCAC+TGG | 0.527209 | 1_2:-58259461 | None:intergenic |
| ATATTATCTAATGGATTCAA+AGG | 0.530582 | 1_2:-58257959 | None:intergenic |
| GCAAAAGTCCACTGTGTCAA+AGG | 0.530832 | 1_2:+58255566 | Msa0080050:CDS |
| GATGAATTCAACTCCTAACT+GGG | 0.531998 | 1_2:-58257371 | None:intergenic |
| TTGGCAAGACCATTATATGT+TGG | 0.532186 | 1_2:+58257250 | Msa0080050:CDS |
| ATGTGGTGTCTGAGAAACTA+GGG | 0.533355 | 1_2:-58253653 | None:intergenic |
| ACAACAGAAGCTGTCCCCTC+TGG | 0.533993 | 1_2:-58252234 | None:intergenic |
| GACTTCTCTTTACGCATGGA+TGG | 0.534395 | 1_2:-58256646 | None:intergenic |
| ATAAGACTTCTCTTTACGCA+TGG | 0.535515 | 1_2:-58256650 | None:intergenic |
| CACAGGCAACCTGTACTTGG+TGG | 0.535612 | 1_2:-58260187 | None:intergenic |
| ATAGTGCACTTGATTATCCA+TGG | 0.536074 | 1_2:+58256888 | Msa0080050:CDS |
| ACTGAATTCTGCACTTGTCA+TGG | 0.538319 | 1_2:-58257339 | None:intergenic |
| CGGCATCATTAGAGATAGAT+CGG | 0.538917 | 1_2:-58254454 | None:intergenic |
| GGAAGGTAGTCTTGAAAGCA+GGG | 0.541939 | 1_2:+58253950 | Msa0080050:CDS |
| ACTCAACACGAGTTAGCCTT+GGG | 0.542670 | 1_2:-58256964 | None:intergenic |
| AGCAGTTGTCCACCAAGTAC+AGG | 0.544298 | 1_2:+58260178 | Msa0080050:CDS |
| TGCTAACCATGTCACTTCCC+AGG | 0.548811 | 1_2:+58258927 | Msa0080050:CDS |
| CTGCGGACTGGTATAAGAGA+TGG | 0.549190 | 1_2:+58257214 | Msa0080050:CDS |
| TTGTAGGTTAAATCGATTCA+CGG | 0.552596 | 1_2:-58249574 | None:intergenic |
| GAGAGAGAAAACAAGAGAAA+GGG | 0.553322 | 1_2:-58249547 | None:intergenic |
| AGGTCTCAAGATCAAGTGAA+TGG | 0.554399 | 1_2:+58260213 | Msa0080050:CDS |
| CGTTCCTTCCATATCCATCA+AGG | 0.554433 | 1_2:-58254009 | None:intergenic |
| TATGTGGTGTCTGAGAAACT+AGG | 0.554615 | 1_2:-58253654 | None:intergenic |
| CCAGATGCATCGTTAAGTAA+AGG | 0.554967 | 1_2:-58260279 | None:intergenic |
| AAAACCTGCGTGGTTTGCCA+AGG | 0.555120 | 1_2:-58257117 | None:intergenic |
| GAAGCTTTGAGGAGGCAGAT+TGG | 0.556916 | 1_2:+58257986 | Msa0080050:CDS |
| GAATTTCTCTGTAAATAGGA+AGG | 0.557537 | 1_2:-58260770 | None:intergenic |
| AAAATTACAGATTAAGTAAG+GGG | 0.558954 | 1_2:-58260925 | None:intergenic |
| AAGAGCTACTGAATAGGAGC+TGG | 0.562419 | 1_2:+58261031 | Msa0080050:three_prime_UTR |
| TGCTATTACGAAGATTGGGC+AGG | 0.562780 | 1_2:+58260134 | Msa0080050:CDS |
| GTTCTATGACACAAGAGTCT+AGG | 0.563001 | 1_2:+58259678 | Msa0080050:CDS |
| CCATTTAGTTTGTATCACAT+AGG | 0.564439 | 1_2:+58260893 | Msa0080050:three_prime_UTR |
| ACTTCAGCTTAATGTCTCAA+AGG | 0.565165 | 1_2:+58252741 | Msa0080050:CDS |
| TTATGTAGCCTTCACACAAA+GGG | 0.567098 | 1_2:-58261075 | None:intergenic |
| ACATACTAGGAAGGTCATCA+TGG | 0.567760 | 1_2:-58259649 | None:intergenic |
| TTTGCAAAGCATCCAAGGCG+TGG | 0.570904 | 1_2:-58254425 | None:intergenic |
| GAGGTTACCAATATTGGCCT+GGG | 0.571947 | 1_2:-58258944 | None:intergenic |
| TTTGAAGGAAAATAATATGG+AGG | 0.574084 | 1_2:+58254163 | Msa0080050:CDS |
| GCAATACCCTCCAGCTGATG+TGG | 0.575728 | 1_2:+58260695 | Msa0080050:CDS |
| AGTATCGCACGGTTGCAGGC+TGG | 0.577322 | 1_2:-58260742 | None:intergenic |
| AGGGAGAGCAATGATGCACC+AGG | 0.581666 | 1_2:+58252685 | Msa0080050:CDS |
| AAAGACGGTCAAACCTTCTG+AGG | 0.581676 | 1_2:+58256507 | Msa0080050:CDS |
| TGGGATCTCAGTGGAGCAAG+GGG | 0.581686 | 1_2:+58251663 | Msa0080050:CDS |
| CACTTTACACGGTTGAGCAG+AGG | 0.582929 | 1_2:-58258980 | None:intergenic |
| GAATGTTTAAAAGATTCTGA+AGG | 0.583011 | 1_2:+58259394 | Msa0080050:CDS |
| ATTGGGATCTCAGTGGAGCA+AGG | 0.585319 | 1_2:+58251661 | Msa0080050:CDS |
| CCAGATTCTACTTCAGAAGA+CGG | 0.586286 | 1_2:-58254474 | None:intergenic |
| TGGTCTCAAGCTACAAAGGA+AGG | 0.586757 | 1_2:+58260105 | Msa0080050:CDS |
| GTTCCCTTGGCAAACCACGC+AGG | 0.587364 | 1_2:+58257113 | Msa0080050:intron |
| AGAGAAATTCAAATGTGCAT+GGG | 0.587897 | 1_2:+58260783 | Msa0080050:CDS |
| ACTTAAATCATGTTGGACTA+GGG | 0.588058 | 1_2:+58256936 | Msa0080050:CDS |
| TATGAAGCATACAGAAAGCA+TGG | 0.589048 | 1_2:+58251701 | Msa0080050:CDS |
| TGATGTTGCATCACTTTACA+CGG | 0.589402 | 1_2:-58258991 | None:intergenic |
| GTAACAGACTGAGACTGGAC+AGG | 0.589416 | 1_2:-58252766 | None:intergenic |
| CAAGGCTAACTCGTGTTGAG+TGG | 0.590048 | 1_2:+58256966 | Msa0080050:CDS |
| TATTGGCCTGGGAAGTGACA+TGG | 0.591157 | 1_2:-58258933 | None:intergenic |
| TAATAGATCCATTGAAATGG+TGG | 0.592802 | 1_2:+58251920 | Msa0080050:CDS |
| GAATAGGAGCTGGCACATAC+CGG | 0.594291 | 1_2:+58261041 | Msa0080050:three_prime_UTR |
| GCACGCAGTAAAACCTCAGA+AGG | 0.597284 | 1_2:-58256520 | None:intergenic |
| CATTAATAATGTCATCAAAG+AGG | 0.597905 | 1_2:-58261189 | None:intergenic |
| AAAACAAGAGAGATTCATGA+TGG | 0.598180 | 1_2:+58257298 | Msa0080050:CDS |
| TCTCCTGAGAAAGATGGAGC+TGG | 0.598280 | 1_2:+58250924 | Msa0080050:CDS |
| TGATCTTGAGACCTTATCAC+AGG | 0.600930 | 1_2:-58260204 | None:intergenic |
| GCATGGTAAAGATTGGAAGA+AGG | 0.602065 | 1_2:+58251718 | Msa0080050:CDS |
| CTTCATCCATGGTGGCAGAG+AGG | 0.603440 | 1_2:-58259606 | None:intergenic |
| ATCTGAGCCACATCAGCTGG+AGG | 0.605296 | 1_2:-58260702 | None:intergenic |
| AAACCTGCGTGGTTTGCCAA+GGG | 0.605604 | 1_2:-58257116 | None:intergenic |
| AGGGATGAGAGCTAAAATCT+GGG | 0.606466 | 1_2:-58260817 | None:intergenic |
| CAAGTTTCTCGATGCTTCTG+TGG | 0.606617 | 1_2:+58253914 | Msa0080050:CDS |
| GGCATGGTCTCAAGCTACAA+AGG | 0.609766 | 1_2:+58260101 | Msa0080050:intron |
| CGGAAACCTCTCTGCCACCA+TGG | 0.610537 | 1_2:+58259600 | Msa0080050:CDS |
| AATCAACATCAACAAGCCAT+AGG | 0.617002 | 1_2:+58255406 | Msa0080050:CDS |
| GCGTTGCCTCAATTGAAGCA+TGG | 0.617652 | 1_2:-58259567 | None:intergenic |
| GAATCACGTCTCCAGTTGAA+GGG | 0.618260 | 1_2:+58255339 | Msa0080050:intron |
| AATCTAGAAGTGTGAATAAG+CGG | 0.619158 | 1_2:+58250880 | Msa0080050:CDS |
| TACAGATTAAGTAAGGGGCA+AGG | 0.619550 | 1_2:-58260920 | None:intergenic |
| GCATATCTATCTCTACCAGA+GGG | 0.620511 | 1_2:+58252219 | Msa0080050:CDS |
| ATTATGTAGCCTTCACACAA+AGG | 0.620809 | 1_2:-58261076 | None:intergenic |
| AGTTGAATACCATTCTATCC+CGG | 0.621666 | 1_2:-58253711 | None:intergenic |
| AGCACTGCTGGAGTTCCTAA+GGG | 0.622103 | 1_2:+58254032 | Msa0080050:CDS |
| TTACTGCGTGCTGATCAGAA+AGG | 0.622646 | 1_2:+58256532 | Msa0080050:CDS |
| ACTTGCAGAGTTGTACTGAA+CGG | 0.624851 | 1_2:+58260673 | Msa0080050:intron |
| TGACAGAATTACCTCCAAAG+AGG | 0.625229 | 1_2:-58254247 | None:intergenic |
| GGCATATCTATCTCTACCAG+AGG | 0.628948 | 1_2:+58252218 | Msa0080050:intron |
| GGTTAAATCGATTCACGGCG+AGG | 0.629367 | 1_2:-58249569 | None:intergenic |
| TGATGACCTTCCTAGTATGT+CGG | 0.630040 | 1_2:+58259652 | Msa0080050:CDS |
| TGAGCTCATCACTTCATGTG+TGG | 0.634529 | 1_2:+58260350 | Msa0080050:CDS |
| GTTGAAGGGAGAAAGAATGA+TGG | 0.638179 | 1_2:+58255353 | Msa0080050:CDS |
| CAAGAGTGAAAGTGATTCCG+CGG | 0.644840 | 1_2:-58249607 | None:intergenic |
| TCTGAGCCACATCAGCTGGA+GGG | 0.645393 | 1_2:-58260701 | None:intergenic |
| TTTCAAGAAGCATTATGCCA+CGG | 0.645708 | 1_2:+58259417 | Msa0080050:CDS |
| AACTATCCGACATACTAGGA+AGG | 0.646168 | 1_2:-58259658 | None:intergenic |
| GCTTTGGGCTTCATCCATGG+TGG | 0.646183 | 1_2:-58259614 | None:intergenic |
| AAGGATCAATGGCACCGACA+AGG | 0.648478 | 1_2:+58250856 | Msa0080050:exon |
| TTAAGCAGGGCTTCACAAAG+AGG | 0.648843 | 1_2:+58253622 | Msa0080050:CDS |
| GGAAGGTTTCGAGTATCGCA+CGG | 0.648915 | 1_2:-58260753 | None:intergenic |
| GACGGAGGAGAAGCATGCAG+CGG | 0.650843 | 1_2:+58254113 | Msa0080050:CDS |
| AGTTCCTTGATGGATATGGA+AGG | 0.652302 | 1_2:+58254005 | Msa0080050:CDS |
| AGCAGGGCTTCACAAAGAGG+AGG | 0.653229 | 1_2:+58253625 | Msa0080050:CDS |
| GTTAGGAGTTGAATTCATCA+CGG | 0.655789 | 1_2:+58257375 | Msa0080050:CDS |
| CTCACCAAAACAAATAAAGA+CGG | 0.659655 | 1_2:+58256492 | Msa0080050:CDS |
| TTGGACTAGGGAATATCCCA+AGG | 0.661354 | 1_2:+58256948 | Msa0080050:CDS |
| AATTATCAGCTTGATGACGG+AGG | 0.663340 | 1_2:+58254098 | Msa0080050:CDS |
| TATACTTGCCTTTGACACAG+TGG | 0.663441 | 1_2:-58255574 | None:intergenic |
| AATTCTCCCCAACAAGTCAG+CGG | 0.664103 | 1_2:+58254207 | Msa0080050:CDS |
| CTAATAAATTGGGATCTCAG+TGG | 0.665494 | 1_2:+58251654 | Msa0080050:CDS |
| AATGCATGCTTCACCTGTGA+AGG | 0.667655 | 1_2:+58258078 | Msa0080050:CDS |
| TAGTTTCTCAGACACCACAT+AGG | 0.669340 | 1_2:+58253656 | Msa0080050:CDS |
| ACATTATTAATGTCTAGGAA+GGG | 0.673447 | 1_2:+58261200 | Msa0080050:three_prime_UTR |
| AATGGATCTATTACGTACAG+CGG | 0.676588 | 1_2:-58251910 | None:intergenic |
| CTTTAGCTCTACAAGTACCG+TGG | 0.680662 | 1_2:-58259434 | None:intergenic |
| CAGAGGCAGCTTGAGCACAG+AGG | 0.682588 | 1_2:-58258963 | None:intergenic |
| TCTCAGACACCACATAGGAG+AGG | 0.683376 | 1_2:+58253661 | Msa0080050:CDS |
| GAGTGGTAAACTGGGACTCG+TGG | 0.685072 | 1_2:-58253496 | None:intergenic |
| ACTGCTGGAGTTCCTAAGGG+AGG | 0.691043 | 1_2:+58254035 | Msa0080050:CDS |
| GAAGGTAGTCTTGAAAGCAG+GGG | 0.695243 | 1_2:+58253951 | Msa0080050:CDS |
| ATATGCCCGAAGCTTTGAGG+AGG | 0.696255 | 1_2:+58257978 | Msa0080050:CDS |
| GGAAACATTATTCTGAGCTG+CGG | 0.699382 | 1_2:+58257197 | Msa0080050:CDS |
| AAGTGTTCCGAAAACCTGCG+TGG | 0.699640 | 1_2:-58257127 | None:intergenic |
| TGTGGTGTCTGAGAAACTAG+GGG | 0.699681 | 1_2:-58253652 | None:intergenic |
| AAATAAAGTTAAAATTCGTG+CGG | 0.700583 | 1_2:+58255431 | Msa0080050:CDS |
| AACAGTATCGAGAATCAGTG+AGG | 0.709059 | 1_2:+58257176 | Msa0080050:CDS |
| GATCTGTCATCATTGCAATG+AGG | 0.714057 | 1_2:-58252260 | None:intergenic |
| GTAGAGCTAAAGGAAGCCAG+TGG | 0.716008 | 1_2:+58259445 | Msa0080050:CDS |
| GGGATCTCAGTGGAGCAAGG+GGG | 0.723954 | 1_2:+58251664 | Msa0080050:CDS |
| ATGAATTCAACTCCTAACTG+GGG | 0.726781 | 1_2:-58257370 | None:intergenic |
| CATATCTATCTCTACCAGAG+GGG | 0.741033 | 1_2:+58252220 | Msa0080050:CDS |
| CCTACAATCAGTAACAGCCG+CGG | 0.743042 | 1_2:+58249590 | Msa0080050:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAATTGATTTTG+AGG | + | chr1_2:58249849-58249868 | Msa0080050:intron | 10.0% |
| !!! | TTTTTTTATGATTTGATTTT+TGG | + | chr1_2:58250154-58250173 | Msa0080050:intron | 10.0% |
| !!! | TTTTTTATGATTTGATTTTT+GGG | + | chr1_2:58250155-58250174 | Msa0080050:intron | 10.0% |
| !! | ACAAAAAAAAAAAAAAATAG+AGG | + | chr1_2:58255722-58255741 | Msa0080050:intron | 10.0% |
| !!! | ATAATTTCTTTAAAATTTTC+AGG | + | chr1_2:58258900-58258919 | Msa0080050:intron | 10.0% |
| !!! | AACAATAAAAAGATTAATTT+TGG | - | chr1_2:58260651-58260670 | None:intergenic | 10.0% |
| !!! | CTGTTTTTAAATTAATTTTG+AGG | + | chr1_2:58250098-58250117 | Msa0080050:intron | 15.0% |
| !!! | TTTTAAAAATGCATCATATA+TGG | - | chr1_2:58250580-58250599 | None:intergenic | 15.0% |
| !!! | ATTGATTTATTTAAATTTCC+AGG | + | chr1_2:58251881-58251900 | Msa0080050:intron | 15.0% |
| !!! | CAAAATATTTTCATAAAGAA+GGG | + | chr1_2:58252396-58252415 | Msa0080050:intron | 15.0% |
| !! | AACCATTATTACATTAATTA+TGG | - | chr1_2:58254320-58254339 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAACATAACTGT+AGG | + | chr1_2:58255211-58255230 | Msa0080050:intron | 15.0% |
| !! | GATAATAATAACTAAGAAAT+AGG | - | chr1_2:58255880-58255899 | None:intergenic | 15.0% |
| !! | AGATTGTATATATATGTTAA+TGG | - | chr1_2:58257487-58257506 | None:intergenic | 15.0% |
| !!! | GCATAAAAAAGTATTAATTT+GGG | - | chr1_2:58259160-58259179 | None:intergenic | 15.0% |
| !!! | TGCATAAAAAAGTATTAATT+TGG | - | chr1_2:58259161-58259180 | None:intergenic | 15.0% |
| !!! | ATATTTTTATGCTATAAATC+AGG | + | chr1_2:58260080-58260099 | Msa0080050:intron | 15.0% |
| !! | AAAAATTACAGATTAAGTAA+GGG | - | chr1_2:58260929-58260948 | None:intergenic | 15.0% |
| !! | AAAAAATTACAGATTAAGTA+AGG | - | chr1_2:58260930-58260949 | None:intergenic | 15.0% |
| !!! | AATTAATTTTGAGGTAAATG+AGG | + | chr1_2:58250107-58250126 | Msa0080050:intron | 20.0% |
| !!! | ATTAATTTTGAGGTAAATGA+GGG | + | chr1_2:58250108-58250127 | Msa0080050:intron | 20.0% |
| !!! | GGATTTTAGTATTTAAGATT+TGG | + | chr1_2:58250280-58250299 | Msa0080050:intron | 20.0% |
| !! | ATACTATGTAATTAACATGA+AGG | - | chr1_2:58250715-58250734 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTCAGTATACTAA+AGG | + | chr1_2:58250837-58250856 | Msa0080050:intron | 20.0% |
| !!! | TTTAAAATGACATGATTTCA+TGG | + | chr1_2:58251396-58251415 | Msa0080050:intron | 20.0% |
| !! | TTAAAATGACATGATTTCAT+GGG | + | chr1_2:58251397-58251416 | Msa0080050:intron | 20.0% |
| !! | AAGAAGTTGTCTAATAAATT+GGG | + | chr1_2:58251644-58251663 | Msa0080050:CDS | 20.0% |
| !! | ATTGTAAATTAAAATGGTAG+TGG | - | chr1_2:58251839-58251858 | None:intergenic | 20.0% |
| !!! | ACAAGCATTGTAAATTAAAA+TGG | - | chr1_2:58251845-58251864 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCCTTAAGTGATT+TGG | + | chr1_2:58252071-58252090 | Msa0080050:intron | 20.0% |
| !! | ATTAATAATTCAGTTCATGA+TGG | - | chr1_2:58252144-58252163 | None:intergenic | 20.0% |
| !!! | GAAATTTTGTTAAGGAAAAA+AGG | - | chr1_2:58252339-58252358 | None:intergenic | 20.0% |
| !!! | GCAAAATATTTTCATAAAGA+AGG | + | chr1_2:58252395-58252414 | Msa0080050:intron | 20.0% |
| !! | ACTAACTATACACAAATTAA+AGG | - | chr1_2:58252906-58252925 | None:intergenic | 20.0% |
| !!! | AATGTATAATCTGAAGTTTT+GGG | - | chr1_2:58253269-58253288 | None:intergenic | 20.0% |
| !!! | TAATGTATAATCTGAAGTTT+TGG | - | chr1_2:58253270-58253289 | None:intergenic | 20.0% |
| !!! | ATTACTTTTTCAATTTAGTC+TGG | + | chr1_2:58253286-58253305 | Msa0080050:intron | 20.0% |
| !!! | ACTAAGTTTTAATTCTTTGA+AGG | + | chr1_2:58254148-58254167 | Msa0080050:CDS | 20.0% |
| !!! | TTCTTTGAAGGAAAATAATA+TGG | + | chr1_2:58254160-58254179 | Msa0080050:CDS | 20.0% |
| !!! | TTTTAACTTTATTTCTCCTA+TGG | - | chr1_2:58255425-58255444 | None:intergenic | 20.0% |
| !! | AAATAAAGTTAAAATTCGTG+CGG | + | chr1_2:58255431-58255450 | Msa0080050:CDS | 20.0% |
| !!! | ACTAAGATTTACAGTATTTT+AGG | - | chr1_2:58256067-58256086 | None:intergenic | 20.0% |
| !! | CTATATAATGTAGTTGAATA+AGG | - | chr1_2:58256315-58256334 | None:intergenic | 20.0% |
| !! | CGGTATTATGATTTATTATA+TGG | + | chr1_2:58257395-58257414 | Msa0080050:intron | 20.0% |
| !! | TAATAGTAAACAATAAGAAG+TGG | + | chr1_2:58257562-58257581 | Msa0080050:intron | 20.0% |
| !! | TAAATGAGACAAAAAAAATG+AGG | - | chr1_2:58257757-58257776 | None:intergenic | 20.0% |
| !! | TTAATTGAAGAAAATTAGCA+TGG | + | chr1_2:58257855-58257874 | Msa0080050:intron | 20.0% |
| !!! | ATATTATCTAATGGATTCAA+AGG | - | chr1_2:58257962-58257981 | None:intergenic | 20.0% |
| !!! | ATTAATGGAAATTCAAGTTT+TGG | + | chr1_2:58258046-58258065 | Msa0080050:CDS | 20.0% |
| !!! | TTAATGGAAATTCAAGTTTT+GGG | + | chr1_2:58258047-58258066 | Msa0080050:CDS | 20.0% |
| !! | GATCTCAAAAAATACATTAA+GGG | + | chr1_2:58258518-58258537 | Msa0080050:intron | 20.0% |
| !!! | TTATTTAGAATAGTGTTTTG+GGG | - | chr1_2:58258650-58258669 | None:intergenic | 20.0% |
| !!! | CTTATTTAGAATAGTGTTTT+GGG | - | chr1_2:58258651-58258670 | None:intergenic | 20.0% |
| !! | TGACGATACATAAATATATT+AGG | + | chr1_2:58258853-58258872 | Msa0080050:intron | 20.0% |
| !!! | ATTTCTTTAAAATTTTCAGG+TGG | + | chr1_2:58258903-58258922 | Msa0080050:intron | 20.0% |
| !!! | TAAAAAAGTATTAATTTGGG+AGG | - | chr1_2:58259157-58259176 | None:intergenic | 20.0% |
| !! | TGATGATTTCTAAATCTTAA+TGG | + | chr1_2:58259231-58259250 | Msa0080050:intron | 20.0% |
| !! | GATGATTTCTAAATCTTAAT+GGG | + | chr1_2:58259232-58259251 | Msa0080050:intron | 20.0% |
| !!! | CTTTATATGTAAATTTTCCT+TGG | + | chr1_2:58259265-58259284 | Msa0080050:intron | 20.0% |
| !! | GTAATGACATTAATAATCAA+AGG | - | chr1_2:58259486-58259505 | None:intergenic | 20.0% |
| !! | CATTATGACTTATACATAAA+TGG | + | chr1_2:58259817-58259836 | Msa0080050:intron | 20.0% |
| !! | TCATGATAATAAGTAAATAC+CGG | - | chr1_2:58259934-58259953 | None:intergenic | 20.0% |
| !! | ATAGCATAAAAATATGTCAA+AGG | - | chr1_2:58260075-58260094 | None:intergenic | 20.0% |
| !! | TATGATGTATATTCAAGAAT+GGG | - | chr1_2:58260595-58260614 | None:intergenic | 20.0% |
| !! | ATATGATGTATATTCAAGAA+TGG | - | chr1_2:58260596-58260615 | None:intergenic | 20.0% |
| !! | CTTGAATATACATCATATAT+TGG | + | chr1_2:58260598-58260617 | Msa0080050:intron | 20.0% |
| !! | ATTTGAATTTCTCTGTAAAT+AGG | - | chr1_2:58260777-58260796 | None:intergenic | 20.0% |
| !! | AGAAGATATAATTCTAAGTA+GGG | - | chr1_2:58260839-58260858 | None:intergenic | 20.0% |
| !! | AAAATTACAGATTAAGTAAG+GGG | - | chr1_2:58260928-58260947 | None:intergenic | 20.0% |
| !! | ATTAATAACGGCAATATTAA+GGG | + | chr1_2:58260996-58261015 | Msa0080050:three_prime_UTR | 20.0% |
| ! | ACAACATTATGAAGAAAATG+AGG | - | chr1_2:58249741-58249760 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTCTTGATGATTT+GGG | + | chr1_2:58249894-58249913 | Msa0080050:intron | 25.0% |
| !! | TTAGTATTTAAGATTTGGAG+TGG | + | chr1_2:58250285-58250304 | Msa0080050:intron | 25.0% |
| !! | TAGTATTTAAGATTTGGAGT+GGG | + | chr1_2:58250286-58250305 | Msa0080050:intron | 25.0% |
| ! | TGCTATAGATCTTACATAAA+CGG | - | chr1_2:58250426-58250445 | None:intergenic | 25.0% |
| ! | CATTAATTCTCTTCAAAAAG+TGG | - | chr1_2:58250650-58250669 | None:intergenic | 25.0% |
| ! | AGAGAATTAATGTTAACGAT+TGG | + | chr1_2:58250658-58250677 | Msa0080050:intron | 25.0% |
| !!! | AGTTTCTAAAAGAGTTTTAG+TGG | + | chr1_2:58251070-58251089 | Msa0080050:intron | 25.0% |
| !! | TCTTTTAAACTATGTTGCAT+CGG | + | chr1_2:58251154-58251173 | Msa0080050:intron | 25.0% |
| ! | TGGTAAAAAAATCACCAATT+TGG | + | chr1_2:58251506-58251525 | Msa0080050:intron | 25.0% |
| ! | GAAGAAGTTGTCTAATAAAT+TGG | + | chr1_2:58251643-58251662 | Msa0080050:CDS | 25.0% |
| ! | GATTTATTTAAATTTCCAGG+TGG | + | chr1_2:58251884-58251903 | Msa0080050:intron | 25.0% |
| ! | AAGCTCTTTACAATATGAAT+CGG | + | chr1_2:58251943-58251962 | Msa0080050:CDS | 25.0% |
| ! | TACCTAATTTCTAAACCTAA+AGG | - | chr1_2:58252034-58252053 | None:intergenic | 25.0% |
| !! | TTTAGAAATTAGGTATTGTC+TGG | + | chr1_2:58252039-58252058 | Msa0080050:intron | 25.0% |
| !! | TTAGAAATTAGGTATTGTCT+GGG | + | chr1_2:58252040-58252059 | Msa0080050:intron | 25.0% |
| ! | ATCACAAATAATGGTTTCAA+TGG | - | chr1_2:58252193-58252212 | None:intergenic | 25.0% |
| ! | AACCATTATTTGTGATTAAC+AGG | + | chr1_2:58252197-58252216 | Msa0080050:intron | 25.0% |
| !! | GCTGTTTAGAAATTTTGTTA+AGG | - | chr1_2:58252347-58252366 | None:intergenic | 25.0% |
| !! | CAAAATTTCTAAACAGCTTT+TGG | + | chr1_2:58252350-58252369 | Msa0080050:intron | 25.0% |
| ! | ACTACATCATTTATAATGTC+AGG | - | chr1_2:58252534-58252553 | None:intergenic | 25.0% |
| ! | ATACAAAAACAATGCTTAGT+TGG | + | chr1_2:58252949-58252968 | Msa0080050:intron | 25.0% |
| ! | AGTATGAAAAATATGTTACC+AGG | - | chr1_2:58253391-58253410 | None:intergenic | 25.0% |
| ! | TTTGAAGGAAAATAATATGG+AGG | + | chr1_2:58254163-58254182 | Msa0080050:CDS | 25.0% |
| ! | ATTACATTAATTATGGCCTA+AGG | - | chr1_2:58254313-58254332 | None:intergenic | 25.0% |
| ! | GGCCATAATTAATGTAATAA+TGG | + | chr1_2:58254315-58254334 | Msa0080050:intron | 25.0% |
| !! | ATTTTACTGTGTCTTAGAAT+TGG | + | chr1_2:58254518-58254537 | Msa0080050:intron | 25.0% |
| !! | TTTTACTGTGTCTTAGAATT+GGG | + | chr1_2:58254519-58254538 | Msa0080050:intron | 25.0% |
| !!! | TGTTTATAAGTGGTTTTGTA+GGG | - | chr1_2:58254561-58254580 | None:intergenic | 25.0% |
| ! | CATGAAAATGTGTTTATAAG+TGG | - | chr1_2:58254571-58254590 | None:intergenic | 25.0% |
| !!! | TCTAATACCATCTTTGATTT+TGG | + | chr1_2:58254720-58254739 | Msa0080050:intron | 25.0% |
| !!! | CTAATACCATCTTTGATTTT+GGG | + | chr1_2:58254721-58254740 | Msa0080050:intron | 25.0% |
| ! | CATGAAAATGTGTTTATAAG+TGG | - | chr1_2:58254571-58254590 | None:intergenic | 25.0% |
| ! | CATGAAAATGTGTTTATAAG+TGG | - | chr1_2:58254571-58254590 | None:intergenic | 25.0% |
| !!! | TCTAATACCATCTTTGATTT+TGG | + | chr1_2:58254720-58254739 | Msa0080050:intron | 25.0% |
| !!! | CTAATACCATCTTTGATTTT+GGG | + | chr1_2:58254721-58254740 | Msa0080050:intron | 25.0% |
| !!! | ATCCTTGAGTTTAGATTTTT+TGG | - | chr1_2:58255472-58255491 | None:intergenic | 25.0% |
| !! | AATATCATTGATTATCTCCT+AGG | + | chr1_2:58255845-58255864 | Msa0080050:intron | 25.0% |
| ! | TTCCCTATATTATTAGAATC+AGG | + | chr1_2:58255909-58255928 | Msa0080050:intron | 25.0% |
| ! | CTCCTGATTCTAATAATATA+GGG | - | chr1_2:58255914-58255933 | None:intergenic | 25.0% |
| ! | ACTCCTGATTCTAATAATAT+AGG | - | chr1_2:58255915-58255934 | None:intergenic | 25.0% |
| !!! | AAGAATTTTCAAGGAGATTA+TGG | + | chr1_2:58255964-58255983 | Msa0080050:intron | 25.0% |
| !!! | AGAATTTTCAAGGAGATTAT+GGG | + | chr1_2:58255965-58255984 | Msa0080050:intron | 25.0% |
| !! | CTTCTCATTTTCGATATATT+TGG | + | chr1_2:58256356-58256375 | Msa0080050:intron | 25.0% |
| ! | TGTAGATGATGAGAAAAAAA+CGG | + | chr1_2:58256435-58256454 | Msa0080050:CDS | 25.0% |
| !!! | TAATTTTCTTTGTAACTTGC+AGG | + | chr1_2:58256802-58256821 | Msa0080050:intron | 25.0% |
| ! | GTTAAAGTATGTGATTGTAA+AGG | + | chr1_2:58257053-58257072 | Msa0080050:intron | 25.0% |
| !! | TTTTAGTATGTTGCATACAA+AGG | - | chr1_2:58257802-58257821 | None:intergenic | 25.0% |
| ! | TCATCAAAAGCAAGAAAATA+TGG | - | chr1_2:58257906-58257925 | None:intergenic | 25.0% |
| ! | AGTATAGAACCACATATTAA+TGG | + | chr1_2:58258031-58258050 | Msa0080050:CDS | 25.0% |
| ! | CTTGAATTTCCATTAATATG+TGG | - | chr1_2:58258043-58258062 | None:intergenic | 25.0% |
| !!! | TAATGGAAATTCAAGTTTTG+GGG | + | chr1_2:58258048-58258067 | Msa0080050:CDS | 25.0% |
| ! | AAATAGCAACTACAATGTAT+AGG | - | chr1_2:58258227-58258246 | None:intergenic | 25.0% |
| ! | AACAATGAAAATGTATGTCA+AGG | - | chr1_2:58258298-58258317 | None:intergenic | 25.0% |
| ! | GGATCTCAAAAAATACATTA+AGG | + | chr1_2:58258517-58258536 | Msa0080050:intron | 25.0% |
| !!! | TATTTAGAATAGTGTTTTGG+GGG | - | chr1_2:58258649-58258668 | None:intergenic | 25.0% |
| !!! | CCTTATTTAGAATAGTGTTT+TGG | - | chr1_2:58258652-58258671 | None:intergenic | 25.0% |
| ! | CCAAAACACTATTCTAAATA+AGG | + | chr1_2:58258649-58258668 | Msa0080050:intron | 25.0% |
| !! | GCATTTCTTTAGTCTTTATT+TGG | - | chr1_2:58258745-58258764 | None:intergenic | 25.0% |
| ! | AGACTAAAGAAATGCATTAA+AGG | + | chr1_2:58258750-58258769 | Msa0080050:intron | 25.0% |
| !!! | ACTTTTTTATGCAGTTCTTT+TGG | + | chr1_2:58259168-58259187 | Msa0080050:intron | 25.0% |
| ! | ATGAAAAGGGTAAATGAAAA+CGG | - | chr1_2:58259209-58259228 | None:intergenic | 25.0% |
| ! | AGAAATCATCAAGATGAAAA+GGG | - | chr1_2:58259222-58259241 | None:intergenic | 25.0% |
| ! | TAGAAATCATCAAGATGAAA+AGG | - | chr1_2:58259223-58259242 | None:intergenic | 25.0% |
| !! | AAATTTTCCTTGGTTAGATA+TGG | + | chr1_2:58259275-58259294 | Msa0080050:intron | 25.0% |
| ! | AAATGCTAATAATGGCATAT+TGG | + | chr1_2:58259354-58259373 | Msa0080050:CDS | 25.0% |
| !!! | TTAAACATTCTATGCCATTT+TGG | - | chr1_2:58259384-58259403 | None:intergenic | 25.0% |
| ! | GAATGTTTAAAAGATTCTGA+AGG | + | chr1_2:58259394-58259413 | Msa0080050:CDS | 25.0% |
| !! | TTGATTGGGTTATATTTTAC+AGG | + | chr1_2:58259535-58259554 | Msa0080050:intron | 25.0% |
| ! | ACTGTCATTGAAATCATTAA+AGG | + | chr1_2:58259704-58259723 | Msa0080050:CDS | 25.0% |
| !!! | AACAATGAGAATAATTTGCT+AGG | - | chr1_2:58259905-58259924 | None:intergenic | 25.0% |
| ! | AATTAAAGACATGTCAAACT+TGG | + | chr1_2:58260395-58260414 | Msa0080050:intron | 25.0% |
| ! | CATTAACTTTACAATCGAAT+GGG | - | chr1_2:58260436-58260455 | None:intergenic | 25.0% |
| ! | ACATTAACTTTACAATCGAA+TGG | - | chr1_2:58260437-58260456 | None:intergenic | 25.0% |
| !! | TGTAAAGTTAATGTTTTCCT+TGG | + | chr1_2:58260443-58260462 | Msa0080050:intron | 25.0% |
| ! | ATGATGTATATTCAAGAATG+GGG | - | chr1_2:58260594-58260613 | None:intergenic | 25.0% |
| ! | GAGAAGATATAATTCTAAGT+AGG | - | chr1_2:58260840-58260859 | None:intergenic | 25.0% |
| ! | CTCTATACAACTAAAAATTC+TGG | - | chr1_2:58260864-58260883 | None:intergenic | 25.0% |
| !!! | CAGAATTTTTAGTTGTATAG+AGG | + | chr1_2:58260862-58260881 | Msa0080050:three_prime_UTR | 25.0% |
| !! | GTTATTAATCAACAGCTTTT+GGG | - | chr1_2:58260985-58261004 | None:intergenic | 25.0% |
| !! | CAAAAGCTGTTGATTAATAA+CGG | + | chr1_2:58260984-58261003 | Msa0080050:three_prime_UTR | 25.0% |
| ! | GATTAATAACGGCAATATTA+AGG | + | chr1_2:58260995-58261014 | Msa0080050:three_prime_UTR | 25.0% |
| ! | AAGAAAATTTCACGAATTGA+TGG | - | chr1_2:58261134-58261153 | None:intergenic | 25.0% |
| !!! | TTCGTGAAATTTTCTTGTTT+TGG | + | chr1_2:58261138-58261157 | Msa0080050:three_prime_UTR | 25.0% |
| ! | CATTAATAATGTCATCAAAG+AGG | - | chr1_2:58261192-58261211 | None:intergenic | 25.0% |
| ! | TGATGACATTATTAATGTCT+AGG | + | chr1_2:58261195-58261214 | Msa0080050:three_prime_UTR | 25.0% |
| ! | ACATTATTAATGTCTAGGAA+GGG | + | chr1_2:58261200-58261219 | Msa0080050:three_prime_UTR | 25.0% |
| ! | ACCTTTATATTCAAGTTTCG+CGG | + | chr1_2:58249473-58249492 | Msa0080050:five_prime_UTR | 30.0% |
| ! | TTGTAGGTTAAATCGATTCA+CGG | - | chr1_2:58249577-58249596 | None:intergenic | 30.0% |
| !!! | CGGTTTTTTTCTTGATGATT+TGG | + | chr1_2:58249893-58249912 | Msa0080050:intron | 30.0% |
| !!! | TTTCAGTTTTGAAGTGTTTG+AGG | + | chr1_2:58250036-58250055 | Msa0080050:intron | 30.0% |
| ACGAAGAAAATTGTTGAATC+TGG | + | chr1_2:58250182-58250201 | Msa0080050:intron | 30.0% | |
| !! | TTTTAGATTCGAAGTGTTTG+AGG | + | chr1_2:58250235-58250254 | Msa0080050:intron | 30.0% |
| TGTAATTAACATGAAGGCTT+AGG | - | chr1_2:58250709-58250728 | None:intergenic | 30.0% | |
| TCAGTATACTAAAGGATCAA+TGG | + | chr1_2:58250845-58250864 | Msa0080050:intron | 30.0% | |
| ! | AATCTAGAAGTGTGAATAAG+CGG | + | chr1_2:58250880-58250899 | Msa0080050:CDS | 30.0% |
| TTTCGAAACATGAAGTAACA+TGG | + | chr1_2:58250996-58251015 | Msa0080050:intron | 30.0% | |
| ATTGATGTCAGTATTAGTGT+AGG | + | chr1_2:58251111-58251130 | Msa0080050:intron | 30.0% | |
| ! | AGGTTTTCTTCAAAGTTATC+GGG | - | chr1_2:58251301-58251320 | None:intergenic | 30.0% |
| ! | CAGGTTTTCTTCAAAGTTAT+CGG | - | chr1_2:58251302-58251321 | None:intergenic | 30.0% |
| TTCCTCTCTCAAAACATAAA+TGG | - | chr1_2:58251332-58251351 | None:intergenic | 30.0% | |
| !!! | ATGTTTTGAGAGAGGAAATT+CGG | + | chr1_2:58251335-58251354 | Msa0080050:intron | 30.0% |
| ! | ACATGATTTCATGGGTTTTT+GGG | + | chr1_2:58251405-58251424 | Msa0080050:intron | 30.0% |
| ! | TTTGAGGTTTATCCTTTGTT+TGG | - | chr1_2:58251438-58251457 | None:intergenic | 30.0% |
| ! | CATCATACCTGTATTTCTAT+TGG | + | chr1_2:58251472-58251491 | Msa0080050:intron | 30.0% |
| TTCATAGCCAATAGAAATAC+AGG | - | chr1_2:58251482-58251501 | None:intergenic | 30.0% | |
| ! | TTCTATTGGCTATGAATACA+TGG | + | chr1_2:58251486-58251505 | Msa0080050:intron | 30.0% |
| CAATTAATATGCATGATGCA+TGG | - | chr1_2:58251537-58251556 | None:intergenic | 30.0% | |
| TCAAAATGTGAGGTTTAAAC+AGG | - | chr1_2:58251603-58251622 | None:intergenic | 30.0% | |
| ACGTAATAGATCCATTGAAA+TGG | + | chr1_2:58251917-58251936 | Msa0080050:CDS | 30.0% | |
| TAATAGATCCATTGAAATGG+TGG | + | chr1_2:58251920-58251939 | Msa0080050:CDS | 30.0% | |
| AGCTCTTTACAATATGAATC+GGG | + | chr1_2:58251944-58251963 | Msa0080050:CDS | 30.0% | |
| AAGGCATAATGCATACAATA+CGG | - | chr1_2:58252015-58252034 | None:intergenic | 30.0% | |
| ATTGTATGCATTATGCCTTT+AGG | + | chr1_2:58252016-58252035 | Msa0080050:intron | 30.0% | |
| ! | TGCCTTTAGGTTTAGAAATT+AGG | + | chr1_2:58252029-58252048 | Msa0080050:intron | 30.0% |
| TTTCTAAGCCAAATCACTTA+AGG | - | chr1_2:58252082-58252101 | None:intergenic | 30.0% | |
| GACACTATTGTATGCATTAA+TGG | + | chr1_2:58252110-58252129 | Msa0080050:intron | 30.0% | |
| TGCCTGTTAATCACAAATAA+TGG | - | chr1_2:58252202-58252221 | None:intergenic | 30.0% | |
| ATCATTATAATGTCCTGGTA+AGG | + | chr1_2:58252280-58252299 | Msa0080050:intron | 30.0% | |
| AAAATAATGTTGACCTTACC+AGG | - | chr1_2:58252296-58252315 | None:intergenic | 30.0% | |
| !!! | TCAACATTATTTTTTCGCTG+TGG | + | chr1_2:58252303-58252322 | Msa0080050:intron | 30.0% |
| ! | ATCTCTTATGTTTGTTGAGA+TGG | + | chr1_2:58252578-58252597 | Msa0080050:intron | 30.0% |
| ! | TCTCTTATGTTTGTTGAGAT+GGG | + | chr1_2:58252579-58252598 | Msa0080050:intron | 30.0% |
| !!! | ACTCTTTTTTTTTCCTCATC+AGG | + | chr1_2:58252861-58252880 | Msa0080050:intron | 30.0% |
| !!! | CTCTTTTTTTTTCCTCATCA+GGG | + | chr1_2:58252862-58252881 | Msa0080050:intron | 30.0% |
| ! | ACAGTAATTTGCAAAGTTAG+TGG | + | chr1_2:58253056-58253075 | Msa0080050:intron | 30.0% |
| AGAATAACAAATCTGGACAA+AGG | - | chr1_2:58253345-58253364 | None:intergenic | 30.0% | |
| ACAGTTCAGAATAACAAATC+TGG | - | chr1_2:58253352-58253371 | None:intergenic | 30.0% | |
| TGATGGCTATTCAATTAATC+AGG | + | chr1_2:58253442-58253461 | Msa0080050:intron | 30.0% | |
| !! | TATCATCTTTCTTTTGAGAG+TGG | - | chr1_2:58253516-58253535 | None:intergenic | 30.0% |
| ACTCTCAAAAGAAAGATGAT+AGG | + | chr1_2:58253515-58253534 | Msa0080050:CDS | 30.0% | |
| CTCTCAAAAGAAAGATGATA+GGG | + | chr1_2:58253516-58253535 | Msa0080050:CDS | 30.0% | |
| TGCCATTATATAGTGTTTGT+TGG | + | chr1_2:58253738-58253757 | Msa0080050:intron | 30.0% | |
| AGCCAACAAACACTATATAA+TGG | - | chr1_2:58253743-58253762 | None:intergenic | 30.0% | |
| GTGAATAAGTGCAATATTGA+TGG | + | chr1_2:58253800-58253819 | Msa0080050:intron | 30.0% | |
| TTACAGAAAGAAAGAAAGAG+TGG | + | chr1_2:58254064-58254083 | Msa0080050:CDS | 30.0% | |
| AAAGAAAGAGTGGAAAATGT+TGG | + | chr1_2:58254074-58254093 | Msa0080050:CDS | 30.0% | |
| AGAAACAAAAAACTCCTCTT+TGG | + | chr1_2:58254233-58254252 | Msa0080050:CDS | 30.0% | |
| TTAATTATGGCCTAAGGTTA+AGG | - | chr1_2:58254307-58254326 | None:intergenic | 30.0% | |
| TTTACTGTGTCTTAGAATTG+GGG | + | chr1_2:58254520-58254539 | Msa0080050:intron | 30.0% | |
| !!! | GTGTTTATAAGTGGTTTTGT+AGG | - | chr1_2:58254562-58254581 | None:intergenic | 30.0% |
| ATGCCATATCTTATCCAAAA+CGG | + | chr1_2:58254588-58254607 | Msa0080050:intron | 30.0% | |
| GAAAATGTGTTTATAAGTGG+TGG | - | chr1_2:58254568-58254587 | None:intergenic | 30.0% | |
| ATGCCATATCTTATCCAAAA+CGG | + | chr1_2:58254588-58254607 | Msa0080050:intron | 30.0% | |
| GAAAATGTGTTTATAAGTGG+TGG | - | chr1_2:58254568-58254587 | None:intergenic | 30.0% | |
| ATGCCATATCTTATCCAAAA+CGG | + | chr1_2:58254588-58254607 | Msa0080050:intron | 30.0% | |
| !! | CTTGATGATGTGTTTATAAG+TGG | - | chr1_2:58255142-58255161 | None:intergenic | 30.0% |
| GTCCAAAAAATCTAAACTCA+AGG | + | chr1_2:58255467-58255486 | Msa0080050:CDS | 30.0% | |
| ! | TTCCATTTGCTGATAAGATA+TGG | + | chr1_2:58255535-58255554 | Msa0080050:CDS | 30.0% |
| TTCCATATCTTATCAGCAAA+TGG | - | chr1_2:58255540-58255559 | None:intergenic | 30.0% | |
| AGAACAGAAACTACATCATT+AGG | + | chr1_2:58255762-58255781 | Msa0080050:intron | 30.0% | |
| TCCTTGAAAATTCTTACAGT+GGG | - | chr1_2:58255959-58255978 | None:intergenic | 30.0% | |
| !! | GAATTTTCAAGGAGATTATG+GGG | + | chr1_2:58255966-58255985 | Msa0080050:intron | 30.0% |
| ! | AATCTTAGTTACAGAGTGTT+TGG | + | chr1_2:58256078-58256097 | Msa0080050:intron | 30.0% |
| ! | ATCTTAGTTACAGAGTGTTT+GGG | + | chr1_2:58256079-58256098 | Msa0080050:intron | 30.0% |
| CCTATATCAACAAATCACAA+TGG | - | chr1_2:58256133-58256152 | None:intergenic | 30.0% | |
| !! | CCATTGTGATTTGTTGATAT+AGG | + | chr1_2:58256130-58256149 | Msa0080050:intron | 30.0% |
| ! | TATAGTTTGTCCTTTGTTGT+TGG | + | chr1_2:58256155-58256174 | Msa0080050:intron | 30.0% |
| TCAAGAGTTCAAACACAATT+AGG | + | chr1_2:58256245-58256264 | Msa0080050:intron | 30.0% | |
| AATGAGAAGATAACGACATT+TGG | - | chr1_2:58256345-58256364 | None:intergenic | 30.0% | |
| GAGAAAAAAACGGTGATTAA+AGG | + | chr1_2:58256445-58256464 | Msa0080050:CDS | 30.0% | |
| CTCACCAAAACAAATAAAGA+CGG | + | chr1_2:58256492-58256511 | Msa0080050:CDS | 30.0% | |
| !! | TTGACCGTCTTTATTTGTTT+TGG | - | chr1_2:58256499-58256518 | None:intergenic | 30.0% |
| GAACTAACTTCACTTAAAAG+TGG | - | chr1_2:58256583-58256602 | None:intergenic | 30.0% | |
| ! | TGAAAAAGCTTGAACCTTTT+GGG | - | chr1_2:58256713-58256732 | None:intergenic | 30.0% |
| ! | ATGAAAAAGCTTGAACCTTT+TGG | - | chr1_2:58256714-58256733 | None:intergenic | 30.0% |
| TAGCTGTTTGTCATCTTATT+TGG | + | chr1_2:58256835-58256854 | Msa0080050:CDS | 30.0% | |
| TACTTAAATCATGTTGGACT+AGG | + | chr1_2:58256935-58256954 | Msa0080050:CDS | 30.0% | |
| ACTTAAATCATGTTGGACTA+GGG | + | chr1_2:58256936-58256955 | Msa0080050:CDS | 30.0% | |
| CACATACTTTAACATTCACA+TGG | - | chr1_2:58257046-58257065 | None:intergenic | 30.0% | |
| !!! | TCATGAATCTCTCTTGTTTT+GGG | - | chr1_2:58257298-58257317 | None:intergenic | 30.0% |
| !! | ATCATGAATCTCTCTTGTTT+TGG | - | chr1_2:58257299-58257318 | None:intergenic | 30.0% |
| AAAACAAGAGAGATTCATGA+TGG | + | chr1_2:58257298-58257317 | Msa0080050:CDS | 30.0% | |
| AGCTACTATAAACCAAGAAT+GGG | - | chr1_2:58257634-58257653 | None:intergenic | 30.0% | |
| GAGACAAAAAAAATGAGGAA+AGG | - | chr1_2:58257752-58257771 | None:intergenic | 30.0% | |
| !! | ATTTTCTTGCTTTTGATGAG+TGG | + | chr1_2:58257907-58257926 | Msa0080050:intron | 30.0% |
| !! | TTTTCTTGCTTTTGATGAGT+GGG | + | chr1_2:58257908-58257927 | Msa0080050:intron | 30.0% |
| !! | AATGGAAATTCAAGTTTTGG+GGG | + | chr1_2:58258049-58258068 | Msa0080050:CDS | 30.0% |
| ! | TTAACTAAAGCACTTGAAGA+GGG | - | chr1_2:58258109-58258128 | None:intergenic | 30.0% |
| !!! | TTTTTTGAGATCCTCCATAT+TGG | - | chr1_2:58258510-58258529 | None:intergenic | 30.0% |
| AATACATTAAGGGATGACTT+TGG | + | chr1_2:58258528-58258547 | Msa0080050:intron | 30.0% | |
| !! | ATTTGAGAGTATTGCAAAGA+CGG | - | chr1_2:58258593-58258612 | None:intergenic | 30.0% |
| AAAGGATGCATAGAAATGAA+GGG | - | chr1_2:58258693-58258712 | None:intergenic | 30.0% | |
| AAAAGGATGCATAGAAATGA+AGG | - | chr1_2:58258694-58258713 | None:intergenic | 30.0% | |
| ! | TTAGTCTTTATTTGGAAGTC+AGG | - | chr1_2:58258737-58258756 | None:intergenic | 30.0% |
| ! | AATCCTAATTTTCACTGTCA+TGG | + | chr1_2:58258821-58258840 | Msa0080050:intron | 30.0% |
| ! | AGATCATGCTCTAGATAAAA+AGG | + | chr1_2:58259112-58259131 | Msa0080050:intron | 30.0% |
| ATTTGGGAGGATAAAATGTA+AGG | - | chr1_2:58259144-58259163 | None:intergenic | 30.0% | |
| TTGAAATCATTAAAGGATCC+AGG | + | chr1_2:58259711-58259730 | Msa0080050:CDS | 30.0% | |
| TATTCTCATTGTTCATGATC+CGG | + | chr1_2:58259912-58259931 | Msa0080050:intron | 30.0% | |
| TTTAGTTGCAAAGCTTAGAA+CGG | + | chr1_2:58259971-58259990 | Msa0080050:intron | 30.0% | |
| TTTATGCTATAAATCAGGCA+TGG | + | chr1_2:58260085-58260104 | Msa0080050:intron | 30.0% | |
| AAAGATGCTATTACGAAGAT+TGG | + | chr1_2:58260129-58260148 | Msa0080050:CDS | 30.0% | |
| AAGATGCTATTACGAAGATT+GGG | + | chr1_2:58260130-58260149 | Msa0080050:CDS | 30.0% | |
| GTCTTTAATTACCTGAATCA+TGG | - | chr1_2:58260385-58260404 | None:intergenic | 30.0% | |
| !! | ACCTATTTTAAATGGTGAAC+TGG | + | chr1_2:58260513-58260532 | Msa0080050:intron | 30.0% |
| ! | ACCAGTTCACCATTTAAAAT+AGG | - | chr1_2:58260517-58260536 | None:intergenic | 30.0% |
| GAATTTCTCTGTAAATAGGA+AGG | - | chr1_2:58260773-58260792 | None:intergenic | 30.0% | |
| AGAGAAATTCAAATGTGCAT+GGG | + | chr1_2:58260783-58260802 | Msa0080050:CDS | 30.0% | |
| CCTATGTGATACAAACTAAA+TGG | - | chr1_2:58260896-58260915 | None:intergenic | 30.0% | |
| !! | CCATTTAGTTTGTATCACAT+AGG | + | chr1_2:58260893-58260912 | Msa0080050:three_prime_UTR | 30.0% |
| ! | CGTTATTAATCAACAGCTTT+TGG | - | chr1_2:58260986-58261005 | None:intergenic | 30.0% |
| GACATTATTAATGTCTAGGA+AGG | + | chr1_2:58261199-58261218 | Msa0080050:three_prime_UTR | 30.0% | |
| GAGAGAGAAAACAAGAGAAA+GGG | - | chr1_2:58249550-58249569 | None:intergenic | 35.0% | |
| !!! | AATTGATTTTGAGGTGAGTG+AGG | + | chr1_2:58249858-58249877 | Msa0080050:intron | 35.0% |
| !!! | ATTGATTTTGAGGTGAGTGA+GGG | + | chr1_2:58249859-58249878 | Msa0080050:intron | 35.0% |
| !! | GAGTGAGGGTTATTGTTTTA+CGG | + | chr1_2:58249873-58249892 | Msa0080050:intron | 35.0% |
| ! | TTTGAAGTGTTTGAGGTGAA+TGG | + | chr1_2:58250043-58250062 | Msa0080050:intron | 35.0% |
| CTCATAATATCGACAGAAAG+AGG | - | chr1_2:58250358-58250377 | None:intergenic | 35.0% | |
| TGTTGATGCACTTGAATCTT+TGG | + | chr1_2:58250385-58250404 | Msa0080050:intron | 35.0% | |
| AACAGAATAGAATGTGACAC+AGG | + | chr1_2:58250599-58250618 | Msa0080050:intron | 35.0% | |
| ACAGAATAGAATGTGACACA+GGG | + | chr1_2:58250600-58250619 | Msa0080050:intron | 35.0% | |
| ACACTTCTAGATTTCCTTGT+CGG | - | chr1_2:58250873-58250892 | None:intergenic | 35.0% | |
| GATATTTCTCCTGAGAAAGA+TGG | + | chr1_2:58250918-58250937 | Msa0080050:CDS | 35.0% | |
| GCTCAAGTAAAAACAAGCAA+CGG | + | chr1_2:58250946-58250965 | Msa0080050:CDS | 35.0% | |
| CTCAAGTAAAAACAAGCAAC+GGG | + | chr1_2:58250947-58250966 | Msa0080050:CDS | 35.0% | |
| ATTGCAATACAATACCATGC+AGG | - | chr1_2:58251047-58251066 | None:intergenic | 35.0% | |
| AAACATAAATGGCTCTTGTC+AGG | - | chr1_2:58251321-58251340 | None:intergenic | 35.0% | |
| !!! | AGCCATTTATGTTTTGAGAG+AGG | + | chr1_2:58251327-58251346 | Msa0080050:intron | 35.0% |
| !!! | TGTTTTGAGAGAGGAAATTC+GGG | + | chr1_2:58251336-58251355 | Msa0080050:intron | 35.0% |
| ! | GGATTTGAGTCTTTCTGTTT+TGG | + | chr1_2:58251370-58251389 | Msa0080050:intron | 35.0% |
| ! | GACATGATTTCATGGGTTTT+TGG | + | chr1_2:58251404-58251423 | Msa0080050:intron | 35.0% |
| TTGGGTATTACACCAAACAA+AGG | + | chr1_2:58251423-58251442 | Msa0080050:intron | 35.0% | |
| !!! | TGCACTTGGTTTTGTATTTG+AGG | - | chr1_2:58251454-58251473 | None:intergenic | 35.0% |
| AAATACAGGTATGATGCACT+TGG | - | chr1_2:58251468-58251487 | None:intergenic | 35.0% | |
| TGAACAGGATTCAAAATGTG+AGG | - | chr1_2:58251613-58251632 | None:intergenic | 35.0% | |
| TCTTCTTCTGTGTATTGAAC+AGG | - | chr1_2:58251628-58251647 | None:intergenic | 35.0% | |
| CTAATAAATTGGGATCTCAG+TGG | + | chr1_2:58251654-58251673 | Msa0080050:CDS | 35.0% | |
| TATGAAGCATACAGAAAGCA+TGG | + | chr1_2:58251701-58251720 | Msa0080050:CDS | 35.0% | |
| ! | ACAGAAAGCATGGTAAAGAT+TGG | + | chr1_2:58251711-58251730 | Msa0080050:CDS | 35.0% |
| !! | AAGAAGGTGTGCTTTTGTTT+TGG | + | chr1_2:58251734-58251753 | Msa0080050:intron | 35.0% |
| CTCTTTCATTTCGAAACTTG+AGG | + | chr1_2:58251778-58251797 | Msa0080050:intron | 35.0% | |
| ! | TTCGAAACTTGAGGACATTT+TGG | + | chr1_2:58251787-58251806 | Msa0080050:intron | 35.0% |
| ! | TCGAAACTTGAGGACATTTT+GGG | + | chr1_2:58251788-58251807 | Msa0080050:intron | 35.0% |
| AATGGATCTATTACGTACAG+CGG | - | chr1_2:58251913-58251932 | None:intergenic | 35.0% | |
| GACAGATCATTATAATGTCC+TGG | + | chr1_2:58252275-58252294 | Msa0080050:CDS | 35.0% | |
| !!! | TTATTTTTTCGCTGTGGTGT+AGG | + | chr1_2:58252309-58252328 | Msa0080050:intron | 35.0% |
| ! | TTTCTAAACAGCTTTTGGTC+TGG | + | chr1_2:58252355-58252374 | Msa0080050:intron | 35.0% |
| AAAACTATACTGCAGAAGTG+AGG | - | chr1_2:58252485-58252504 | None:intergenic | 35.0% | |
| ATGTAGTTCATGCTTACACT+TGG | + | chr1_2:58252547-58252566 | Msa0080050:intron | 35.0% | |
| ! | TTATGTTTGTTGAGATGGGT+TGG | + | chr1_2:58252583-58252602 | Msa0080050:intron | 35.0% |
| ACTTCAGCTTAATGTCTCAA+AGG | + | chr1_2:58252741-58252760 | Msa0080050:CDS | 35.0% | |
| !!! | TTTTTTCCTCATCAGGGAAT+TGG | + | chr1_2:58252868-58252887 | Msa0080050:intron | 35.0% |
| ! | TTTTTCCTCATCAGGGAATT+GGG | + | chr1_2:58252869-58252888 | Msa0080050:intron | 35.0% |
| !!! | CTGCACAGTCAGTTTTTTTT+TGG | + | chr1_2:58252987-58253006 | Msa0080050:intron | 35.0% |
| !!! | GTATAATCTGAAGTTTTGGG+TGG | - | chr1_2:58253266-58253285 | None:intergenic | 35.0% |
| !! | TCTTTTGAGAGTGGTAAACT+GGG | - | chr1_2:58253507-58253526 | None:intergenic | 35.0% |
| !! | TTCTTTTGAGAGTGGTAAAC+TGG | - | chr1_2:58253508-58253527 | None:intergenic | 35.0% |
| ! | GACTTCAAGCTTCTTTTGTT+AGG | - | chr1_2:58253556-58253575 | None:intergenic | 35.0% |
| ! | ATGTAGCTTTTGCATTAAGC+AGG | + | chr1_2:58253608-58253627 | Msa0080050:CDS | 35.0% |
| ! | TGTAGCTTTTGCATTAAGCA+GGG | + | chr1_2:58253609-58253628 | Msa0080050:CDS | 35.0% |
| AGTTGAATACCATTCTATCC+CGG | - | chr1_2:58253714-58253733 | None:intergenic | 35.0% | |
| TAGAGATACTAGTTCCTTGA+TGG | + | chr1_2:58253995-58254014 | Msa0080050:CDS | 35.0% | |
| ! | TACTAGTTCCTTGATGGATA+TGG | + | chr1_2:58254001-58254020 | Msa0080050:CDS | 35.0% |
| ! | CTGTAAAATTTTCCTCCCTT+AGG | - | chr1_2:58254050-58254069 | None:intergenic | 35.0% |
| GGAAATTATCAGCTTGATGA+CGG | + | chr1_2:58254095-58254114 | Msa0080050:CDS | 35.0% | |
| AACAAAAAACTCCTCTTTGG+AGG | + | chr1_2:58254236-58254255 | Msa0080050:CDS | 35.0% | |
| TTGGAGGTAATTCTGTCAAT+AGG | + | chr1_2:58254252-58254271 | Msa0080050:CDS | 35.0% | |
| TGGAGGTAATTCTGTCAATA+GGG | + | chr1_2:58254253-58254272 | Msa0080050:CDS | 35.0% | |
| TGCCATATCTTATCCAAAAC+GGG | + | chr1_2:58254589-58254608 | Msa0080050:intron | 35.0% | |
| TGCCATATCTTATCCAAAAC+GGG | + | chr1_2:58254589-58254608 | Msa0080050:intron | 35.0% | |
| !!! | ATTGAGAGGTTTAGTTTTGG+GGG | - | chr1_2:58254884-58254903 | None:intergenic | 35.0% |
| !!! | CATTGAGAGGTTTAGTTTTG+GGG | - | chr1_2:58254885-58254904 | None:intergenic | 35.0% |
| !!! | GCATTGAGAGGTTTAGTTTT+GGG | - | chr1_2:58254886-58254905 | None:intergenic | 35.0% |
| TGCCATATCTTATCCAAAAC+GGG | + | chr1_2:58254589-58254608 | Msa0080050:intron | 35.0% | |
| GATGATGTGTTTATAAGTGG+TGG | - | chr1_2:58255139-58255158 | None:intergenic | 35.0% | |
| TATGTTGAGAAGTCCCATAT+TGG | - | chr1_2:58255176-58255195 | None:intergenic | 35.0% | |
| !! | ATGGCTTGTTGATGTTGATT+CGG | - | chr1_2:58255406-58255425 | None:intergenic | 35.0% |
| AATCAACATCAACAAGCCAT+AGG | + | chr1_2:58255406-58255425 | Msa0080050:CDS | 35.0% | |
| !! | TTTTGATTCAGAGAGAGCAT+TGG | - | chr1_2:58255508-58255527 | None:intergenic | 35.0% |
| TGTGCGGGATATAACAATTA+GGG | - | chr1_2:58255607-58255626 | None:intergenic | 35.0% | |
| ATGTGCGGGATATAACAATT+AGG | - | chr1_2:58255608-58255627 | None:intergenic | 35.0% | |
| AAACACAACACAAAATGTGC+GGG | - | chr1_2:58255622-58255641 | None:intergenic | 35.0% | |
| CAAACACAACACAAAATGTG+CGG | - | chr1_2:58255623-58255642 | None:intergenic | 35.0% | |
| GAAATAGGAAGACTAATCCT+AGG | - | chr1_2:58255865-58255884 | None:intergenic | 35.0% | |
| AATCAGGAGTCTCTTATTAG+TGG | + | chr1_2:58255925-58255944 | Msa0080050:intron | 35.0% | |
| ATCAGGAGTCTCTTATTAGT+GGG | + | chr1_2:58255926-58255945 | Msa0080050:intron | 35.0% | |
| ! | TCCCACTGTAAGAATTTTCA+AGG | + | chr1_2:58255955-58255974 | Msa0080050:intron | 35.0% |
| CTCCTTGAAAATTCTTACAG+TGG | - | chr1_2:58255960-58255979 | None:intergenic | 35.0% | |
| TTTCCACAAAATGTAGGTGA+TGG | - | chr1_2:58256032-58256051 | None:intergenic | 35.0% | |
| CTACTGTTTCCACAAAATGT+AGG | - | chr1_2:58256038-58256057 | None:intergenic | 35.0% | |
| !!! | CGTCTTTATTTGTTTTGGTG+AGG | - | chr1_2:58256494-58256513 | None:intergenic | 35.0% |
| ! | CGTCTACTTCTTTGTTTAGT+TGG | - | chr1_2:58256607-58256626 | None:intergenic | 35.0% |
| ATAAGACTTCTCTTTACGCA+TGG | - | chr1_2:58256653-58256672 | None:intergenic | 35.0% | |
| !! | TTTTGGGTAGAGTGCTTATT+AGG | - | chr1_2:58256697-58256716 | None:intergenic | 35.0% |
| TAATAAGCACTCTACCCAAA+AGG | + | chr1_2:58256696-58256715 | Msa0080050:CDS | 35.0% | |
| !! | TCTGCATTCTAAAGCTTTGA+GGG | + | chr1_2:58256747-58256766 | Msa0080050:intron | 35.0% |
| !! | GCAGATGGTTTACTTTTGAA+TGG | + | chr1_2:58256861-58256880 | Msa0080050:CDS | 35.0% |
| ATAGTGCACTTGATTATCCA+TGG | + | chr1_2:58256888-58256907 | Msa0080050:CDS | 35.0% | |
| ! | AATTCTCTTTTGGCAAACCA+TGG | - | chr1_2:58256908-58256927 | None:intergenic | 35.0% |
| GTTTGCCAAAAGAGAATTTG+TGG | + | chr1_2:58256910-58256929 | Msa0080050:CDS | 35.0% | |
| ! | GTACTCCACAAATTCTCTTT+TGG | - | chr1_2:58256918-58256937 | None:intergenic | 35.0% |
| ! | GTGGAGTACTTAAATCATGT+TGG | + | chr1_2:58256929-58256948 | Msa0080050:CDS | 35.0% |
| ! | TTGAGTGGAGTGTCATAAAA+AGG | + | chr1_2:58256981-58257000 | Msa0080050:CDS | 35.0% |
| TTGGCAAGACCATTATATGT+TGG | + | chr1_2:58257250-58257269 | Msa0080050:CDS | 35.0% | |
| ACACGTTGTCCAACATATAA+TGG | - | chr1_2:58257262-58257281 | None:intergenic | 35.0% | |
| !!! | CATGAATCTCTCTTGTTTTG+GGG | - | chr1_2:58257297-58257316 | None:intergenic | 35.0% |
| ATGAATTCAACTCCTAACTG+GGG | - | chr1_2:58257373-58257392 | None:intergenic | 35.0% | |
| GATGAATTCAACTCCTAACT+GGG | - | chr1_2:58257374-58257393 | None:intergenic | 35.0% | |
| TGATGAATTCAACTCCTAAC+TGG | - | chr1_2:58257375-58257394 | None:intergenic | 35.0% | |
| GTTAGGAGTTGAATTCATCA+CGG | + | chr1_2:58257375-58257394 | Msa0080050:CDS | 35.0% | |
| !! | ATGGAGCTGATTTTGATCAT+AGG | - | chr1_2:58257468-58257487 | None:intergenic | 35.0% |
| ! | TTGTGCTATTCTTCTATGCA+CGG | + | chr1_2:58257589-58257608 | Msa0080050:intron | 35.0% |
| CAGCTACTATAAACCAAGAA+TGG | - | chr1_2:58257635-58257654 | None:intergenic | 35.0% | |
| CATTCTTGGTTTATAGTAGC+TGG | + | chr1_2:58257633-58257652 | Msa0080050:intron | 35.0% | |
| ATTAACCTCTAGCAAATGCA+AGG | - | chr1_2:58257664-58257683 | None:intergenic | 35.0% | |
| AATTCCAACACTCTAATCTG+TGG | + | chr1_2:58257681-58257700 | Msa0080050:intron | 35.0% | |
| !! | AAACTCAAAGCATTGTGTCA+CGG | + | chr1_2:58257723-58257742 | Msa0080050:intron | 35.0% |
| !! | TTTCTTGCTTTTGATGAGTG+GGG | + | chr1_2:58257909-58257928 | Msa0080050:intron | 35.0% |
| ! | TGGTTCTATACTCGTAAAAG+AGG | - | chr1_2:58258023-58258042 | None:intergenic | 35.0% |
| ! | TAACTAAAGCACTTGAAGAG+GGG | - | chr1_2:58258108-58258127 | None:intergenic | 35.0% |
| ! | CTTAACTAAAGCACTTGAAG+AGG | - | chr1_2:58258110-58258129 | None:intergenic | 35.0% |
| TCAAGTGCTTTAGTTAAGCA+AGG | + | chr1_2:58258112-58258131 | Msa0080050:intron | 35.0% | |
| TGCTTTAGTTAAGCAAGGAA+AGG | + | chr1_2:58258117-58258136 | Msa0080050:intron | 35.0% | |
| ! | TATGCCACAGAATTTCGTTT+TGG | + | chr1_2:58258176-58258195 | Msa0080050:intron | 35.0% |
| TTTGCACTGCTATGATTAAC+TGG | + | chr1_2:58258317-58258336 | Msa0080050:intron | 35.0% | |
| GGAAGTCAGATAACTTGATT+GGG | - | chr1_2:58258356-58258375 | None:intergenic | 35.0% | |
| AGGAAGTCAGATAACTTGAT+TGG | - | chr1_2:58258357-58258376 | None:intergenic | 35.0% | |
| TCAAGTTATCTGACTTCCTA+AGG | + | chr1_2:58258358-58258377 | Msa0080050:intron | 35.0% | |
| GAAAAAGAAACCTCCACAAA+AGG | - | chr1_2:58258468-58258487 | None:intergenic | 35.0% | |
| ! | GGAGGTTTCTTTTTCTTCAT+TGG | + | chr1_2:58258473-58258492 | Msa0080050:intron | 35.0% |
| !! | TTTGAGAGTATTGCAAAGAC+GGG | - | chr1_2:58258592-58258611 | None:intergenic | 35.0% |
| ! | TCTTTATTTGGAAGTCAGGA+GGG | - | chr1_2:58258733-58258752 | None:intergenic | 35.0% |
| ATGCATTAAAGGTCTAGTAG+TGG | + | chr1_2:58258761-58258780 | Msa0080050:intron | 35.0% | |
| AATAAACCATGTGAAAGCGA+TGG | - | chr1_2:58258801-58258820 | None:intergenic | 35.0% | |
| TTGCCATGACAGTGAAAATT+AGG | - | chr1_2:58258827-58258846 | None:intergenic | 35.0% | |
| TGATGTTGCATCACTTTACA+CGG | - | chr1_2:58258994-58259013 | None:intergenic | 35.0% | |
| ! | AAAGCGTGCTCTAGATAAAA+AGG | + | chr1_2:58259050-58259069 | Msa0080050:CDS | 35.0% |
| AGCTGGAAAAAGTAAGAACA+AGG | - | chr1_2:58259301-58259320 | None:intergenic | 35.0% | |
| GAGCTTCGAAATGCTAATAA+TGG | + | chr1_2:58259346-58259365 | Msa0080050:CDS | 35.0% | |
| GGCATATTGGAAAACCAAAA+TGG | + | chr1_2:58259367-58259386 | Msa0080050:CDS | 35.0% | |
| !! | TTTCAAGAAGCATTATGCCA+CGG | + | chr1_2:58259417-58259436 | Msa0080050:CDS | 35.0% |
| ACCTTGAAGCAACATTTGAT+TGG | + | chr1_2:58259520-58259539 | Msa0080050:intron | 35.0% | |
| CCTTGAAGCAACATTTGATT+GGG | + | chr1_2:58259521-58259540 | Msa0080050:intron | 35.0% | |
| ! | AAGCCCAAAGCAAATTTTGA+TGG | + | chr1_2:58259626-58259645 | Msa0080050:CDS | 35.0% |
| ! | TGGCCATCAAAATTTGCTTT+GGG | - | chr1_2:58259632-58259651 | None:intergenic | 35.0% |
| ! | ATGGCCATCAAAATTTGCTT+TGG | - | chr1_2:58259633-58259652 | None:intergenic | 35.0% |
| ATAGAACTATCCGACATACT+AGG | - | chr1_2:58259665-58259684 | None:intergenic | 35.0% | |
| ATAATGACTGACTGCAAAAC+CGG | - | chr1_2:58259803-58259822 | None:intergenic | 35.0% | |
| ! | ATCTTGTTTCCTCCCTATTT+CGG | + | chr1_2:58259849-58259868 | Msa0080050:intron | 35.0% |
| ACATAATTGCATGGTGTTCA+AGG | - | chr1_2:58260040-58260059 | None:intergenic | 35.0% | |
| TTTAGCTGGACATAATTGCA+TGG | - | chr1_2:58260049-58260068 | None:intergenic | 35.0% | |
| TATGTCAAAGGTTCTTTAGC+TGG | - | chr1_2:58260063-58260082 | None:intergenic | 35.0% | |
| TCAGAATCTTTGTGCAGTTT+CGG | - | chr1_2:58260306-58260325 | None:intergenic | 35.0% | |
| !! | TCTTTTTGAAGAGTATGCCA+AGG | - | chr1_2:58260463-58260482 | None:intergenic | 35.0% |
| !!! | AGTTTTGAACAGCACATCTT+TGG | + | chr1_2:58260482-58260501 | Msa0080050:intron | 35.0% |
| !! | GTTTTGAACAGCACATCTTT+GGG | + | chr1_2:58260483-58260502 | Msa0080050:intron | 35.0% |
| ! | TTTTGAACAGCACATCTTTG+GGG | + | chr1_2:58260484-58260503 | Msa0080050:intron | 35.0% |
| TATATTCAAGAATGGGGAAG+AGG | - | chr1_2:58260588-58260607 | None:intergenic | 35.0% | |
| CAGAGAAATTCAAATGTGCA+TGG | + | chr1_2:58260782-58260801 | Msa0080050:CDS | 35.0% | |
| ACAAAGGGTAGATAGATAAC+CGG | - | chr1_2:58261063-58261082 | None:intergenic | 35.0% | |
| TTATGTAGCCTTCACACAAA+GGG | - | chr1_2:58261078-58261097 | None:intergenic | 35.0% | |
| ATTATGTAGCCTTCACACAA+AGG | - | chr1_2:58261079-58261098 | None:intergenic | 35.0% | |
| GCCGCGAAACTTGAATATAA+AGG | - | chr1_2:58249477-58249496 | None:intergenic | 40.0% | |
| GAGAGAGAAAGAGAGAGATA+GGG | - | chr1_2:58249519-58249538 | None:intergenic | 40.0% | |
| AGAGAGAGAAAGAGAGAGAT+AGG | - | chr1_2:58249520-58249539 | None:intergenic | 40.0% | |
| GGAGAGAGAAAACAAGAGAA+AGG | - | chr1_2:58249551-58249570 | None:intergenic | 40.0% | |
| TCTTGGATCTGTAAGCTACT+AGG | + | chr1_2:58249625-58249644 | Msa0080050:intron | 40.0% | |
| CTTGGATCTGTAAGCTACTA+GGG | + | chr1_2:58249626-58249645 | Msa0080050:intron | 40.0% | |
| ! | TGCGATTGTGAGAAGTTTTG+TGG | + | chr1_2:58249934-58249953 | Msa0080050:intron | 40.0% |
| !! | GCATCAGAAAAGTGTTATGC+TGG | + | chr1_2:58250259-58250278 | Msa0080050:intron | 40.0% |
| TAGGTCAGTGGTATGTATAG+AGG | - | chr1_2:58250690-58250709 | None:intergenic | 40.0% | |
| !! | AGAGTTTTAGTGGTAGCTCT+TGG | + | chr1_2:58251080-58251099 | Msa0080050:intron | 40.0% |
| ! | AAACTATGTTGCATCGGTAC+AGG | + | chr1_2:58251160-58251179 | Msa0080050:intron | 40.0% |
| GATGCATGGATACTCCAAAT+TGG | - | chr1_2:58251523-58251542 | None:intergenic | 40.0% | |
| ATGCTCAGCGCATACTATAA+TGG | - | chr1_2:58251564-58251583 | None:intergenic | 40.0% | |
| GCATGGTAAAGATTGGAAGA+AGG | + | chr1_2:58251718-58251737 | Msa0080050:CDS | 40.0% | |
| AAGAGCTTCCACCATTTCAA+TGG | - | chr1_2:58251931-58251950 | None:intergenic | 40.0% | |
| GCATATCTATCTCTACCAGA+GGG | + | chr1_2:58252219-58252238 | Msa0080050:CDS | 40.0% | |
| CATATCTATCTCTACCAGAG+GGG | + | chr1_2:58252220-58252239 | Msa0080050:CDS | 40.0% | |
| GATCTGTCATCATTGCAATG+AGG | - | chr1_2:58252263-58252282 | None:intergenic | 40.0% | |
| AGTTGCTGAGGAAATAGAGA+TGG | - | chr1_2:58252509-58252528 | None:intergenic | 40.0% | |
| TAATGTCAGGATAGTTGCTG+AGG | - | chr1_2:58252521-58252540 | None:intergenic | 40.0% | |
| ! | AGGAAGAGAGTGATAGTGAA+AGG | + | chr1_2:58252665-58252684 | Msa0080050:intron | 40.0% |
| ! | GGAAGAGAGTGATAGTGAAA+GGG | + | chr1_2:58252666-58252685 | Msa0080050:intron | 40.0% |
| ! | TTTTCACGCTTTCGTTTCAC+AGG | - | chr1_2:58252721-58252740 | None:intergenic | 40.0% |
| ! | GTCTTTTCTTCAGTAGAGAG+AGG | - | chr1_2:58252807-58252826 | None:intergenic | 40.0% |
| CTGAAGAAAAGACGCATTGA+TGG | + | chr1_2:58252814-58252833 | Msa0080050:CDS | 40.0% | |
| AAAAACCCAATTCCCTGATG+AGG | - | chr1_2:58252877-58252896 | None:intergenic | 40.0% | |
| ! | TCATCAGGGAATTGGGTTTT+TGG | + | chr1_2:58252876-58252895 | Msa0080050:intron | 40.0% |
| ACAAACAGCTGTACAAACAC+AGG | - | chr1_2:58253149-58253168 | None:intergenic | 40.0% | |
| !!! | TCTGAAGTTTTGGGTGGAAA+AGG | - | chr1_2:58253260-58253279 | None:intergenic | 40.0% |
| GTTAGTTGTGCTTGTATTCC+TGG | + | chr1_2:58253370-58253389 | Msa0080050:intron | 40.0% | |
| CTGTGTAAGATATTCTGCAC+TGG | + | chr1_2:58253409-58253428 | Msa0080050:intron | 40.0% | |
| ! | GCACTGGATTGTAGTATTGA+TGG | + | chr1_2:58253425-58253444 | Msa0080050:intron | 40.0% |
| AGCTTGAAGTCTACTGTTGA+TGG | + | chr1_2:58253565-58253584 | Msa0080050:CDS | 40.0% | |
| ATGTGGTGTCTGAGAAACTA+GGG | - | chr1_2:58253656-58253675 | None:intergenic | 40.0% | |
| TATGTGGTGTCTGAGAAACT+AGG | - | chr1_2:58253657-58253676 | None:intergenic | 40.0% | |
| TAGTTTCTCAGACACCACAT+AGG | + | chr1_2:58253656-58253675 | Msa0080050:CDS | 40.0% | |
| ! | TTCTGTGGATGGAGAGTTTT+TGG | + | chr1_2:58253929-58253948 | Msa0080050:CDS | 40.0% |
| ! | AGTTCCTTGATGGATATGGA+AGG | + | chr1_2:58254005-58254024 | Msa0080050:CDS | 40.0% |
| !! | AATTATCAGCTTGATGACGG+AGG | + | chr1_2:58254098-58254117 | Msa0080050:CDS | 40.0% |
| !!! | TTCTTTTCCGCTGACTTGTT+GGG | - | chr1_2:58254217-58254236 | None:intergenic | 40.0% |
| !!! | TTTCTTTTCCGCTGACTTGT+TGG | - | chr1_2:58254218-58254237 | None:intergenic | 40.0% |
| TGACAGAATTACCTCCAAAG+AGG | - | chr1_2:58254250-58254269 | None:intergenic | 40.0% | |
| TCTGTCAATAGGGATGTCTT+TGG | + | chr1_2:58254263-58254282 | Msa0080050:CDS | 40.0% | |
| ! | CAAAGTTTGCAAAGCATCCA+AGG | - | chr1_2:58254433-58254452 | None:intergenic | 40.0% |
| CTTGGATGCTTTGCAAACTT+TGG | + | chr1_2:58254431-58254450 | Msa0080050:CDS | 40.0% | |
| CCAGATTCTACTTCAGAAGA+CGG | - | chr1_2:58254477-58254496 | None:intergenic | 40.0% | |
| TGTGTCTTAGAATTGGGGTT+GGG | + | chr1_2:58254525-58254544 | Msa0080050:intron | 40.0% | |
| !! | GTCCCGTTTTGGATAAGATA+TGG | - | chr1_2:58254594-58254613 | None:intergenic | 40.0% |
| CACACACAAAACTAGACATC+TGG | + | chr1_2:58254653-58254672 | Msa0080050:intron | 40.0% | |
| ! | AAAACTAGACATCTGGAGTG+TGG | + | chr1_2:58254660-58254679 | Msa0080050:intron | 40.0% |
| ! | AAACTAGACATCTGGAGTGT+GGG | + | chr1_2:58254661-58254680 | Msa0080050:intron | 40.0% |
| GCACAACCCAAAATCAAAGA+TGG | - | chr1_2:58254730-58254749 | None:intergenic | 40.0% | |
| TTAACACTACCCTACAAAGC+CGG | + | chr1_2:58254750-58254769 | Msa0080050:intron | 40.0% | |
| !! | GTCCCGTTTTGGATAAGATA+TGG | - | chr1_2:58254594-58254613 | None:intergenic | 40.0% |
| !!! | TTGAGAGGTTTAGTTTTGGG+GGG | - | chr1_2:58254883-58254902 | None:intergenic | 40.0% |
| !! | CGCATTGAGAGGTTTAGTTT+TGG | - | chr1_2:58254887-58254906 | None:intergenic | 40.0% |
| AAACTAAACCTCTCAATGCG+AGG | + | chr1_2:58254887-58254906 | Msa0080050:intron | 40.0% | |
| !! | GTCCCGTTTTGGATAAGATA+TGG | - | chr1_2:58254594-58254613 | None:intergenic | 40.0% |
| !!! | ACTCCAGATGTCTAGTTTTG+GGG | - | chr1_2:58254659-58254678 | None:intergenic | 40.0% |
| !!! | CACTCCAGATGTCTAGTTTT+GGG | - | chr1_2:58254660-58254679 | None:intergenic | 40.0% |
| !! | ACACTCCAGATGTCTAGTTT+TGG | - | chr1_2:58254661-58254680 | None:intergenic | 40.0% |
| ! | AAAACTAGACATCTGGAGTG+TGG | + | chr1_2:58254660-58254679 | Msa0080050:intron | 40.0% |
| ! | AAACTAGACATCTGGAGTGT+GGG | + | chr1_2:58254661-58254680 | Msa0080050:intron | 40.0% |
| GCACAACCCAAAATCAAAGA+TGG | - | chr1_2:58254730-58254749 | None:intergenic | 40.0% | |
| AAACTTCTCACCTTACAAGC+TGG | - | chr1_2:58255116-58255135 | None:intergenic | 40.0% | |
| AAGCCACATCTCATCCAATA+TGG | + | chr1_2:58255159-58255178 | Msa0080050:intron | 40.0% | |
| AGCCACATCTCATCCAATAT+GGG | + | chr1_2:58255160-58255179 | Msa0080050:intron | 40.0% | |
| GGACTTCTCAACATAACTGT+AGG | + | chr1_2:58255181-58255200 | Msa0080050:intron | 40.0% | |
| TGAGACACAAATACAGAGAG+AGG | + | chr1_2:58255234-58255253 | Msa0080050:intron | 40.0% | |
| GAGACACAAATACAGAGAGA+GGG | + | chr1_2:58255235-58255254 | Msa0080050:intron | 40.0% | |
| AGACACAAATACAGAGAGAG+GGG | + | chr1_2:58255236-58255255 | Msa0080050:intron | 40.0% | |
| TCATTCTTTCTCCCTTCAAC+TGG | - | chr1_2:58255353-58255372 | None:intergenic | 40.0% | |
| GTTGAAGGGAGAAAGAATGA+TGG | + | chr1_2:58255353-58255372 | Msa0080050:CDS | 40.0% | |
| !! | TGGCTTGTTGATGTTGATTC+GGG | - | chr1_2:58255405-58255424 | None:intergenic | 40.0% |
| TATACTTGCCTTTGACACAG+TGG | - | chr1_2:58255577-58255596 | None:intergenic | 40.0% | |
| ! | CGCACATTTTGTGTTGTGTT+TGG | + | chr1_2:58255621-58255640 | Msa0080050:intron | 40.0% |
| !! | TTTTCAAGGAGATTATGGGG+TGG | + | chr1_2:58255969-58255988 | Msa0080050:intron | 40.0% |
| TGGCGTTGCATATATAAGCA+TGG | - | chr1_2:58256006-58256025 | None:intergenic | 40.0% | |
| TGTGGTTCAACCAACAACAA+AGG | - | chr1_2:58256168-58256187 | None:intergenic | 40.0% | |
| ! | GTTGTTGGTTGAACCACATT+CGG | + | chr1_2:58256170-58256189 | Msa0080050:intron | 40.0% |
| TGGTGAGGCAAAAACTTGAT+CGG | - | chr1_2:58256479-58256498 | None:intergenic | 40.0% | |
| !! | CTCTGCATTCTAAAGCTTTG+AGG | + | chr1_2:58256746-58256765 | Msa0080050:intron | 40.0% |
| !! | CTGCATTCTAAAGCTTTGAG+GGG | + | chr1_2:58256748-58256767 | Msa0080050:intron | 40.0% |
| !! | TAAAGCTTTGAGGGGATTCA+AGG | + | chr1_2:58256756-58256775 | Msa0080050:intron | 40.0% |
| ! | CATCTTATTTGGTTCGCAGA+TGG | + | chr1_2:58256846-58256865 | Msa0080050:CDS | 40.0% |
| ! | AACAGTATCGAGAATCAGTG+AGG | + | chr1_2:58257176-58257195 | Msa0080050:CDS | 40.0% |
| GGAAACATTATTCTGAGCTG+CGG | + | chr1_2:58257197-58257216 | Msa0080050:CDS | 40.0% | |
| ! | AGATGGACTTCCAACAGATT+TGG | + | chr1_2:58257231-58257250 | Msa0080050:CDS | 40.0% |
| ! | AATGGTCTTGCCAAATCTGT+TGG | - | chr1_2:58257244-58257263 | None:intergenic | 40.0% |
| ACTGAATTCTGCACTTGTCA+TGG | - | chr1_2:58257342-58257361 | None:intergenic | 40.0% | |
| GTGCATAGAAGAATAGCACA+AGG | - | chr1_2:58257590-58257609 | None:intergenic | 40.0% | |
| ! | CATTACCTTGCATTTGCTAG+AGG | + | chr1_2:58257656-58257675 | Msa0080050:intron | 40.0% |
| GTTTCTAACGAGTAACCAAG+AGG | - | chr1_2:58257707-58257726 | None:intergenic | 40.0% | |
| !!! | ATGAGTGGGGTTTTTTGTTC+AGG | + | chr1_2:58257922-58257941 | Msa0080050:intron | 40.0% |
| GCTTCGGGCATATTATCTAA+TGG | - | chr1_2:58257971-58257990 | None:intergenic | 40.0% | |
| ATAATATGCCCGAAGCTTTG+AGG | + | chr1_2:58257975-58257994 | Msa0080050:CDS | 40.0% | |
| ! | ACTCGTAAAAGAGGCTTTTC+TGG | - | chr1_2:58258014-58258033 | None:intergenic | 40.0% |
| AGCACCAAAACGAAATTCTG+TGG | - | chr1_2:58258183-58258202 | None:intergenic | 40.0% | |
| ! | GTTCCTTTCCTTTTGCCTAA+TGG | + | chr1_2:58258267-58258286 | Msa0080050:intron | 40.0% |
| TGTCCATTAGGCAAAAGGAA+AGG | - | chr1_2:58258273-58258292 | None:intergenic | 40.0% | |
| TATGTCAAGGCTTGTCCATT+AGG | - | chr1_2:58258285-58258304 | None:intergenic | 40.0% | |
| !! | TGACTTCCTAAGGCTTTGTT+TGG | + | chr1_2:58258368-58258387 | Msa0080050:intron | 40.0% |
| !! | GACTTCCTAAGGCTTTGTTT+GGG | + | chr1_2:58258369-58258388 | Msa0080050:intron | 40.0% |
| AAACTCCCAAACAAAGCCTT+AGG | - | chr1_2:58258377-58258396 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | chr1_2:58258376-58258395 | Msa0080050:intron | 40.0% |
| TTTGGAGGGGAATGAATAAG+AGG | + | chr1_2:58258394-58258413 | Msa0080050:intron | 40.0% | |
| GGAATGAATAAGAGGCTTAG+AGG | + | chr1_2:58258402-58258421 | Msa0080050:intron | 40.0% | |
| AGAGGCTTAGAGGATTAAGT+AGG | + | chr1_2:58258412-58258431 | Msa0080050:intron | 40.0% | |
| AGAGGATTAAGTAGGAGGAA+AGG | + | chr1_2:58258420-58258439 | Msa0080050:intron | 40.0% | |
| GAGGATTAAGTAGGAGGAAA+GGG | + | chr1_2:58258421-58258440 | Msa0080050:intron | 40.0% | |
| AGGATTAAGTAGGAGGAAAG+GGG | + | chr1_2:58258422-58258441 | Msa0080050:intron | 40.0% | |
| AAGAAACCTCCACAAAAGGT+GGG | - | chr1_2:58258464-58258483 | None:intergenic | 40.0% | |
| AAAGAAACCTCCACAAAAGG+TGG | - | chr1_2:58258465-58258484 | None:intergenic | 40.0% | |
| TGGATCAAAACCCTCCAATA+TGG | + | chr1_2:58258493-58258512 | Msa0080050:intron | 40.0% | |
| ATCAAAACCCTCCAATATGG+AGG | + | chr1_2:58258496-58258515 | Msa0080050:intron | 40.0% | |
| TTGAGATCCTCCATATTGGA+GGG | - | chr1_2:58258506-58258525 | None:intergenic | 40.0% | |
| ! | TTTGAGATCCTCCATATTGG+AGG | - | chr1_2:58258507-58258526 | None:intergenic | 40.0% |
| !! | ATGACTTTGGAGAGTTTTGG+AGG | + | chr1_2:58258541-58258560 | Msa0080050:intron | 40.0% |
| !!! | TGACTTTGGAGAGTTTTGGA+GGG | + | chr1_2:58258542-58258561 | Msa0080050:intron | 40.0% |
| !!! | TTAGAATAGTGTTTTGGGGG+AGG | - | chr1_2:58258646-58258665 | None:intergenic | 40.0% |
| !! | GAAAGGGCTTTAGAAGCAAA+AGG | - | chr1_2:58258711-58258730 | None:intergenic | 40.0% |
| ! | GTCTTTATTTGGAAGTCAGG+AGG | - | chr1_2:58258734-58258753 | None:intergenic | 40.0% |
| AATCTTCCATCGCTTTCACA+TGG | + | chr1_2:58258792-58258811 | Msa0080050:intron | 40.0% | |
| AGCACAGAGGTTACCAATAT+TGG | - | chr1_2:58258953-58258972 | None:intergenic | 40.0% | |
| AACAAGGCCATATCTAACCA+AGG | - | chr1_2:58259285-58259304 | None:intergenic | 40.0% | |
| ! | CCCAATCAAATGTTGCTTCA+AGG | - | chr1_2:58259524-58259543 | None:intergenic | 40.0% |
| CTGATACCATGCTTCAATTG+AGG | + | chr1_2:58259561-58259580 | Msa0080050:CDS | 40.0% | |
| ACATACTAGGAAGGTCATCA+TGG | - | chr1_2:58259652-58259671 | None:intergenic | 40.0% | |
| TGATGACCTTCCTAGTATGT+CGG | + | chr1_2:58259652-58259671 | Msa0080050:CDS | 40.0% | |
| AACTATCCGACATACTAGGA+AGG | - | chr1_2:58259661-58259680 | None:intergenic | 40.0% | |
| GTTCTATGACACAAGAGTCT+AGG | + | chr1_2:58259678-58259697 | Msa0080050:CDS | 40.0% | |
| TGATCTTGAGACCTTATCAC+AGG | - | chr1_2:58260207-58260226 | None:intergenic | 40.0% | |
| AGGTCTCAAGATCAAGTGAA+TGG | + | chr1_2:58260213-58260232 | Msa0080050:CDS | 40.0% | |
| CCAGATGCATCGTTAAGTAA+AGG | - | chr1_2:58260282-58260301 | None:intergenic | 40.0% | |
| CCTTTACTTAACGATGCATC+TGG | + | chr1_2:58260279-58260298 | Msa0080050:CDS | 40.0% | |
| CATGAAGTGATGAGCTCAAA+TGG | - | chr1_2:58260348-58260367 | None:intergenic | 40.0% | |
| GGCTACATTAACCATGATTC+AGG | + | chr1_2:58260371-58260390 | Msa0080050:CDS | 40.0% | |
| CGAATGGGAAGTTGTGAAAT+AGG | - | chr1_2:58260421-58260440 | None:intergenic | 40.0% | |
| TTTGAACAGCACATCTTTGG+GGG | + | chr1_2:58260485-58260504 | Msa0080050:intron | 40.0% | |
| ACTTGCAGAGTTGTACTGAA+CGG | + | chr1_2:58260673-58260692 | Msa0080050:intron | 40.0% | |
| AGGGATGAGAGCTAAAATCT+GGG | - | chr1_2:58260820-58260839 | None:intergenic | 40.0% | |
| TAGGGATGAGAGCTAAAATC+TGG | - | chr1_2:58260821-58260840 | None:intergenic | 40.0% | |
| TACAGATTAAGTAAGGGGCA+AGG | - | chr1_2:58260923-58260942 | None:intergenic | 40.0% | |
| GAATCCAAGAGCTACTGAAT+AGG | + | chr1_2:58261025-58261044 | Msa0080050:three_prime_UTR | 40.0% | |
| TCTATCTACCCTTTGTGTGA+AGG | + | chr1_2:58261067-58261086 | Msa0080050:three_prime_UTR | 40.0% | |
| ! | GACTATGCAGCTCTTTAGAA+AGG | - | chr1_2:58261168-58261187 | None:intergenic | 40.0% |
| CAAGAGTGAAAGTGATTCCG+CGG | - | chr1_2:58249610-58249629 | None:intergenic | 45.0% | |
| AACATGAAGGCTTAGGTCAG+TGG | - | chr1_2:58250702-58250721 | None:intergenic | 45.0% | |
| ! | GTTGCATCGGTACAGGAATT+TGG | + | chr1_2:58251167-58251186 | Msa0080050:intron | 45.0% |
| AGAGAGGAAATTCGGGAGAA+TGG | + | chr1_2:58251343-58251362 | Msa0080050:intron | 45.0% | |
| ! | GAAATTCGGGAGAATGGACT+TGG | + | chr1_2:58251349-58251368 | Msa0080050:intron | 45.0% |
| GGCATATCTATCTCTACCAG+AGG | + | chr1_2:58252218-58252237 | Msa0080050:intron | 45.0% | |
| TATCTTGTTCTTTGCCCCGA+TGG | + | chr1_2:58252454-58252473 | Msa0080050:intron | 45.0% | |
| !! | TGTTGAGATGGGTTGGTTTC+TGG | + | chr1_2:58252590-58252609 | Msa0080050:intron | 45.0% |
| !! | GTTGAGATGGGTTGGTTTCT+GGG | + | chr1_2:58252591-58252610 | Msa0080050:intron | 45.0% |
| !! | TTGAGATGGGTTGGTTTCTG+GGG | + | chr1_2:58252592-58252611 | Msa0080050:intron | 45.0% |
| TTTCTGTACCTGACATCGAC+AGG | + | chr1_2:58252645-58252664 | Msa0080050:intron | 45.0% | |
| !! | TTCACAGGTTTTCGAGATCC+TGG | - | chr1_2:58252706-58252725 | None:intergenic | 45.0% |
| TGGAAGTAACAGACTGAGAC+TGG | - | chr1_2:58252774-58252793 | None:intergenic | 45.0% | |
| ! | CAGTCTGTTACTTCCAGTGA+TGG | + | chr1_2:58252778-58252797 | Msa0080050:CDS | 45.0% |
| GCTGCACAGTCAGTTAGTTA+TGG | + | chr1_2:58253016-58253035 | Msa0080050:intron | 45.0% | |
| TTAAGCAGGGCTTCACAAAG+AGG | + | chr1_2:58253622-58253641 | Msa0080050:CDS | 45.0% | |
| TGTGGTGTCTGAGAAACTAG+GGG | - | chr1_2:58253655-58253674 | None:intergenic | 45.0% | |
| TTCTGTTCTCCTCTCCTATG+TGG | - | chr1_2:58253673-58253692 | None:intergenic | 45.0% | |
| !! | CACAGAAGCATCGAGAAACT+TGG | - | chr1_2:58253916-58253935 | None:intergenic | 45.0% |
| CAAGTTTCTCGATGCTTCTG+TGG | + | chr1_2:58253914-58253933 | Msa0080050:CDS | 45.0% | |
| TTTCTCGATGCTTCTGTGGA+TGG | + | chr1_2:58253918-58253937 | Msa0080050:CDS | 45.0% | |
| !! | GTGGATGGAGAGTTTTTGGA+AGG | + | chr1_2:58253933-58253952 | Msa0080050:CDS | 45.0% |
| ! | TGGAAGGTAGTCTTGAAAGC+AGG | + | chr1_2:58253949-58253968 | Msa0080050:CDS | 45.0% |
| ! | GGAAGGTAGTCTTGAAAGCA+GGG | + | chr1_2:58253950-58253969 | Msa0080050:CDS | 45.0% |
| ! | GAAGGTAGTCTTGAAAGCAG+GGG | + | chr1_2:58253951-58253970 | Msa0080050:CDS | 45.0% |
| CGTTCCTTCCATATCCATCA+AGG | - | chr1_2:58254012-58254031 | None:intergenic | 45.0% | |
| AATTCTCCCCAACAAGTCAG+CGG | + | chr1_2:58254207-58254226 | Msa0080050:CDS | 45.0% | |
| !!! | TCTTTTCCGCTGACTTGTTG+GGG | - | chr1_2:58254216-58254235 | None:intergenic | 45.0% |
| GTCAATAGGGATGTCTTTGG+AGG | + | chr1_2:58254266-58254285 | Msa0080050:CDS | 45.0% | |
| CCTAAGGTTAAGGCAGGAAA+AGG | - | chr1_2:58254297-58254316 | None:intergenic | 45.0% | |
| ! | CCTTTTCCTGCCTTAACCTT+AGG | + | chr1_2:58254294-58254313 | Msa0080050:intron | 45.0% |
| TTATGGCCTAAGGTTAAGGC+AGG | - | chr1_2:58254303-58254322 | None:intergenic | 45.0% | |
| AACAGATGAAATCCACGCCT+TGG | + | chr1_2:58254413-58254432 | Msa0080050:intron | 45.0% | |
| !! | CCGTCTTCTGAAGTAGAATC+TGG | + | chr1_2:58254474-58254493 | Msa0080050:CDS | 45.0% |
| CTGTGTCTTAGAATTGGGGT+TGG | + | chr1_2:58254524-58254543 | Msa0080050:intron | 45.0% | |
| !!! | CTCCAGATGTCTAGTTTTGG+GGG | - | chr1_2:58255002-58255021 | None:intergenic | 45.0% |
| !! | CCTTACAAGCTGGCTTTGTA+GGG | - | chr1_2:58255106-58255125 | None:intergenic | 45.0% |
| !! | ACCTTACAAGCTGGCTTTGT+AGG | - | chr1_2:58255107-58255126 | None:intergenic | 45.0% |
| GTCCCATATTGGATGAGATG+TGG | - | chr1_2:58255165-58255184 | None:intergenic | 45.0% | |
| GACACAAATACAGAGAGAGG+GGG | + | chr1_2:58255237-58255256 | Msa0080050:intron | 45.0% | |
| ACACAAATACAGAGAGAGGG+GGG | + | chr1_2:58255238-58255257 | Msa0080050:intron | 45.0% | |
| ACTGGAGACGTGATTCTAGA+CGG | - | chr1_2:58255335-58255354 | None:intergenic | 45.0% | |
| AGAATCACGTCTCCAGTTGA+AGG | + | chr1_2:58255338-58255357 | Msa0080050:intron | 45.0% | |
| GAATCACGTCTCCAGTTGAA+GGG | + | chr1_2:58255339-58255358 | Msa0080050:intron | 45.0% | |
| GCAAAAGTCCACTGTGTCAA+AGG | + | chr1_2:58255566-58255585 | Msa0080050:CDS | 45.0% | |
| AGATTATGGGGTGGATGCAT+AGG | + | chr1_2:58255978-58255997 | Msa0080050:intron | 45.0% | |
| ! | CAAAATGTAGGTGATGGCTG+TGG | - | chr1_2:58256026-58256045 | None:intergenic | 45.0% |
| ! | CAGCCATCACCTACATTTTG+TGG | + | chr1_2:58256026-58256045 | Msa0080050:intron | 45.0% |
| GAATAGAGCGAAGAGAGACA+GGG | - | chr1_2:58256198-58256217 | None:intergenic | 45.0% | |
| AGAATAGAGCGAAGAGAGAC+AGG | - | chr1_2:58256199-58256218 | None:intergenic | 45.0% | |
| ! | AGCTGTTTCACGTTCTCTGT+AGG | + | chr1_2:58256411-58256430 | Msa0080050:intron | 45.0% |
| AAAGACGGTCAAACCTTCTG+AGG | + | chr1_2:58256507-58256526 | Msa0080050:CDS | 45.0% | |
| ! | TTACTGCGTGCTGATCAGAA+AGG | + | chr1_2:58256532-58256551 | Msa0080050:CDS | 45.0% |
| GACTTCTCTTTACGCATGGA+TGG | - | chr1_2:58256649-58256668 | None:intergenic | 45.0% | |
| ! | TTGGACTAGGGAATATCCCA+AGG | + | chr1_2:58256948-58256967 | Msa0080050:CDS | 45.0% |
| !! | ACTCAACACGAGTTAGCCTT+GGG | - | chr1_2:58256967-58256986 | None:intergenic | 45.0% |
| ACAGCACTGCAATGTCAAGT+AGG | - | chr1_2:58257080-58257099 | None:intergenic | 45.0% | |
| !! | ACTTGTTTCTGCAGTTCCCT+TGG | + | chr1_2:58257100-58257119 | Msa0080050:intron | 45.0% |
| !!! | CTCTCTTGTTTTGGGGTGAA+TGG | - | chr1_2:58257290-58257309 | None:intergenic | 45.0% |
| TATGCACGGTATCCAGAGAA+AGG | + | chr1_2:58257603-58257622 | Msa0080050:intron | 45.0% | |
| AGAAAGGTCTGACCCATTCT+TGG | + | chr1_2:58257619-58257638 | Msa0080050:intron | 45.0% | |
| AATCTGCCTCCTCAAAGCTT+CGG | - | chr1_2:58257987-58258006 | None:intergenic | 45.0% | |
| AATGCATGCTTCACCTGTGA+AGG | + | chr1_2:58258078-58258097 | Msa0080050:CDS | 45.0% | |
| AGGCTTGTCCATTAGGCAAA+AGG | - | chr1_2:58258278-58258297 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr1_2:58258380-58258399 | Msa0080050:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr1_2:58258381-58258400 | Msa0080050:intron | 45.0% |
| GGCTTAGAGGATTAAGTAGG+AGG | + | chr1_2:58258415-58258434 | Msa0080050:intron | 45.0% | |
| TTAAGTAGGAGGAAAGGGGA+AGG | + | chr1_2:58258426-58258445 | Msa0080050:intron | 45.0% | |
| TAAGTAGGAGGAAAGGGGAA+GGG | + | chr1_2:58258427-58258446 | Msa0080050:intron | 45.0% | |
| AGAAACCTCCACAAAAGGTG+GGG | - | chr1_2:58258463-58258482 | None:intergenic | 45.0% | |
| !! | GGGATGACTTTGGAGAGTTT+TGG | + | chr1_2:58258538-58258557 | Msa0080050:intron | 45.0% |
| !! | AGAGTATTGCAAAGACGGGA+AGG | - | chr1_2:58258588-58258607 | None:intergenic | 45.0% |
| !!! | ATAGTGTTTTGGGGGAGGAT+GGG | - | chr1_2:58258641-58258660 | None:intergenic | 45.0% |
| !!! | AATAGTGTTTTGGGGGAGGA+TGG | - | chr1_2:58258642-58258661 | None:intergenic | 45.0% |
| TTTGGAAGTCAGGAGGGAAA+GGG | - | chr1_2:58258727-58258746 | None:intergenic | 45.0% | |
| ATTTGGAAGTCAGGAGGGAA+AGG | - | chr1_2:58258728-58258747 | None:intergenic | 45.0% | |
| ! | GAGGTTACCAATATTGGCCT+GGG | - | chr1_2:58258947-58258966 | None:intergenic | 45.0% |
| AGAGGTTACCAATATTGGCC+TGG | - | chr1_2:58258948-58258967 | None:intergenic | 45.0% | |
| ! | CTTTTTCCAGCTGCTCTTAC+AGG | + | chr1_2:58259309-58259328 | Msa0080050:intron | 45.0% |
| !! | CTTTAGCTCTACAAGTACCG+TGG | - | chr1_2:58259437-58259456 | None:intergenic | 45.0% |
| CACGGTACTTGTAGAGCTAA+AGG | + | chr1_2:58259435-58259454 | Msa0080050:CDS | 45.0% | |
| GAGGCAACGCAATACCTATA+CGG | + | chr1_2:58259580-58259599 | Msa0080050:CDS | 45.0% | |
| ! | TTTGCTTTGGGCTTCATCCA+TGG | - | chr1_2:58259620-58259639 | None:intergenic | 45.0% |
| CATTAAAGGATCCAGGCTAC+AGG | + | chr1_2:58259718-58259737 | Msa0080050:CDS | 45.0% | |
| AATGCTGGATGCTGCATTTC+AGG | + | chr1_2:58259748-58259767 | Msa0080050:CDS | 45.0% | |
| ! | TGGATGCTGCATTTCAGGTA+TGG | + | chr1_2:58259753-58259772 | Msa0080050:intron | 45.0% |
| ! | TTTCAGGTATGGATGCTCTG+TGG | + | chr1_2:58259764-58259783 | Msa0080050:intron | 45.0% |
| TGGTCTCAAGCTACAAAGGA+AGG | + | chr1_2:58260105-58260124 | Msa0080050:CDS | 45.0% | |
| TGCTATTACGAAGATTGGGC+AGG | + | chr1_2:58260134-58260153 | Msa0080050:CDS | 45.0% | |
| TATCACAGGCAACCTGTACT+TGG | - | chr1_2:58260193-58260212 | None:intergenic | 45.0% | |
| AGTACAGGTTGCCTGTGATA+AGG | + | chr1_2:58260193-58260212 | Msa0080050:CDS | 45.0% | |
| TGAGCTCATCACTTCATGTG+TGG | + | chr1_2:58260350-58260369 | Msa0080050:CDS | 45.0% | |
| !! | GGGCGTGCACCTATTTTAAA+TGG | + | chr1_2:58260505-58260524 | Msa0080050:intron | 45.0% |
| AATATCTGAGCCACATCAGC+TGG | - | chr1_2:58260708-58260727 | None:intergenic | 45.0% | |
| AGCTCCTATTCAGTAGCTCT+TGG | - | chr1_2:58261032-58261051 | None:intergenic | 45.0% | |
| AAGAGCTACTGAATAGGAGC+TGG | + | chr1_2:58261031-58261050 | Msa0080050:three_prime_UTR | 45.0% | |
| ! | TGTCTAGGAAGGGTGCATTT+AGG | + | chr1_2:58261210-58261229 | Msa0080050:three_prime_UTR | 45.0% |
| ! | GGTTAAATCGATTCACGGCG+AGG | - | chr1_2:58249572-58249591 | None:intergenic | 50.0% |
| CCTACAATCAGTAACAGCCG+CGG | + | chr1_2:58249590-58249609 | Msa0080050:five_prime_UTR | 50.0% | |
| CGCGGAATCACTTTCACTCT+TGG | + | chr1_2:58249608-58249627 | Msa0080050:five_prime_UTR | 50.0% | |
| !! | AAGGATCAATGGCACCGACA+AGG | + | chr1_2:58250856-58250875 | Msa0080050:exon | 50.0% |
| TCTCCTGAGAAAGATGGAGC+TGG | + | chr1_2:58250924-58250943 | Msa0080050:CDS | 50.0% | |
| ATACAGCACTGCATCCTGCA+TGG | + | chr1_2:58251030-58251049 | Msa0080050:intron | 50.0% | |
| ATTGGGATCTCAGTGGAGCA+AGG | + | chr1_2:58251661-58251680 | Msa0080050:CDS | 50.0% | |
| TTGGGATCTCAGTGGAGCAA+GGG | + | chr1_2:58251662-58251681 | Msa0080050:CDS | 50.0% | |
| AGAAGTGAGGTCTGACCATC+GGG | - | chr1_2:58252472-58252491 | None:intergenic | 50.0% | |
| CAGAAGTGAGGTCTGACCAT+CGG | - | chr1_2:58252473-58252492 | None:intergenic | 50.0% | |
| ACTCTCTTCCTGTCGATGTC+AGG | - | chr1_2:58252656-58252675 | None:intergenic | 50.0% | |
| GTAACAGACTGAGACTGGAC+AGG | - | chr1_2:58252769-58252788 | None:intergenic | 50.0% | |
| TAGAGAGAGGCAACCATCAC+TGG | - | chr1_2:58252794-58252813 | None:intergenic | 50.0% | |
| GCTGTACAAACACAGGCTGA+AGG | - | chr1_2:58253142-58253161 | None:intergenic | 50.0% | |
| ! | AGCCTCGTGCTGTTGGAAAA+AGG | + | chr1_2:58253470-58253489 | Msa0080050:CDS | 50.0% |
| ! | GTCCTTTTTCCAACAGCACG+AGG | - | chr1_2:58253475-58253494 | None:intergenic | 50.0% |
| TCTCAGACACCACATAGGAG+AGG | + | chr1_2:58253661-58253680 | Msa0080050:CDS | 50.0% | |
| CACGAGCTGTCTCTGACATT+TGG | - | chr1_2:58253893-58253912 | None:intergenic | 50.0% | |
| GAAAGCAGGGGAGCTGAAAA+TGG | + | chr1_2:58253963-58253982 | Msa0080050:CDS | 50.0% | |
| AGCACTGCTGGAGTTCCTAA+GGG | + | chr1_2:58254032-58254051 | Msa0080050:CDS | 50.0% | |
| ! | TTTGCAAAGCATCCAAGGCG+TGG | - | chr1_2:58254428-58254447 | None:intergenic | 50.0% |
| ! | TGTGTTGAGAGGTCCCGTTT+TGG | - | chr1_2:58254605-58254624 | None:intergenic | 50.0% |
| TGGCTCAGTGGATGTTGGAT+AGG | + | chr1_2:58254695-58254714 | Msa0080050:intron | 50.0% | |
| GGCTCAGTGGATGTTGGATA+GGG | + | chr1_2:58254696-58254715 | Msa0080050:intron | 50.0% | |
| ! | CATTGCAAGCCGGCTTTGTA+GGG | - | chr1_2:58254762-58254781 | None:intergenic | 50.0% |
| ! | TGTGTTGAGAGGTCCCGTTT+TGG | - | chr1_2:58254605-58254624 | None:intergenic | 50.0% |
| ! | TGTGTTGAGAGGTCCCGTTT+TGG | - | chr1_2:58254605-58254624 | None:intergenic | 50.0% |
| CACCCCCAAAACTAGACATC+TGG | + | chr1_2:58254997-58255016 | Msa0080050:intron | 50.0% | |
| ! | ATCTGGAGTGTGGGCTGATA+GGG | + | chr1_2:58255014-58255033 | Msa0080050:intron | 50.0% |
| TGGCTCAGTGGATGTTGGAT+AGG | + | chr1_2:58254695-58254714 | Msa0080050:intron | 50.0% | |
| GGCTCAGTGGATGTTGGATA+GGG | + | chr1_2:58254696-58254715 | Msa0080050:intron | 50.0% | |
| CCCTACAAAGCCAGCTTGTA+AGG | + | chr1_2:58255103-58255122 | Msa0080050:intron | 50.0% | |
| CTGGAGACGTGATTCTAGAC+GGG | - | chr1_2:58255334-58255353 | None:intergenic | 50.0% | |
| TTGGGCGCACATTCGTTAAG+TGG | + | chr1_2:58256097-58256116 | Msa0080050:intron | 50.0% | |
| GCACGCAGTAAAACCTCAGA+AGG | - | chr1_2:58256523-58256542 | None:intergenic | 50.0% | |
| ! | CACTCAACACGAGTTAGCCT+TGG | - | chr1_2:58256968-58256987 | None:intergenic | 50.0% |
| CAAGGCTAACTCGTGTTGAG+TGG | + | chr1_2:58256966-58256985 | Msa0080050:CDS | 50.0% | |
| ! | AAACCTGCGTGGTTTGCCAA+GGG | - | chr1_2:58257119-58257138 | None:intergenic | 50.0% |
| ! | AAAACCTGCGTGGTTTGCCA+AGG | - | chr1_2:58257120-58257139 | None:intergenic | 50.0% |
| ! | TGGCAAACCACGCAGGTTTT+CGG | + | chr1_2:58257120-58257139 | Msa0080050:CDS | 50.0% |
| AAGTGTTCCGAAAACCTGCG+TGG | - | chr1_2:58257130-58257149 | None:intergenic | 50.0% | |
| CATTATTCTGAGCTGCGGAC+TGG | + | chr1_2:58257202-58257221 | Msa0080050:CDS | 50.0% | |
| !! | CTGCGGACTGGTATAAGAGA+TGG | + | chr1_2:58257214-58257233 | Msa0080050:CDS | 50.0% |
| GAATGGGTCAGACCTTTCTC+TGG | - | chr1_2:58257618-58257637 | None:intergenic | 50.0% | |
| GAGGCCACAGATTAGAGTGT+TGG | - | chr1_2:58257688-58257707 | None:intergenic | 50.0% | |
| CACTCTAATCTGTGGCCTCT+TGG | + | chr1_2:58257689-58257708 | Msa0080050:intron | 50.0% | |
| !! | ATATGCCCGAAGCTTTGAGG+AGG | + | chr1_2:58257978-58257997 | Msa0080050:CDS | 50.0% |
| ATCTGCCTCCTCAAAGCTTC+GGG | - | chr1_2:58257986-58258005 | None:intergenic | 50.0% | |
| !! | GAAGCTTTGAGGAGGCAGAT+TGG | + | chr1_2:58257986-58258005 | Msa0080050:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr1_2:58258379-58258398 | Msa0080050:intron | 50.0% |
| ! | AGTAATCCCCCCACCTTTTG+TGG | + | chr1_2:58258452-58258471 | Msa0080050:intron | 50.0% |
| AAACCTCCACAAAAGGTGGG+GGG | - | chr1_2:58258461-58258480 | None:intergenic | 50.0% | |
| GAAACCTCCACAAAAGGTGG+GGG | - | chr1_2:58258462-58258481 | None:intergenic | 50.0% | |
| ! | TGCTAACCATGTCACTTCCC+AGG | + | chr1_2:58258927-58258946 | Msa0080050:CDS | 50.0% |
| ! | TATTGGCCTGGGAAGTGACA+TGG | - | chr1_2:58258936-58258955 | None:intergenic | 50.0% |
| GTCACTTCCCAGGCCAATAT+TGG | + | chr1_2:58258937-58258956 | Msa0080050:CDS | 50.0% | |
| CACTTTACACGGTTGAGCAG+AGG | - | chr1_2:58258983-58259002 | None:intergenic | 50.0% | |
| GTGTATCCTGTAAGAGCAGC+TGG | - | chr1_2:58259318-58259337 | None:intergenic | 50.0% | |
| GTAGAGCTAAAGGAAGCCAG+TGG | + | chr1_2:58259445-58259464 | Msa0080050:CDS | 50.0% | |
| GCGTTGCCTCAATTGAAGCA+TGG | - | chr1_2:58259570-58259589 | None:intergenic | 50.0% | |
| TGGCAGAGAGGTTTCCGTAT+AGG | - | chr1_2:58259597-58259616 | None:intergenic | 50.0% | |
| TGACTGACTGCAAAACCGGA+GGG | - | chr1_2:58259799-58259818 | None:intergenic | 50.0% | |
| ATGACTGACTGCAAAACCGG+AGG | - | chr1_2:58259800-58259819 | None:intergenic | 50.0% | |
| TCCTCCCTATTTCGGTGACT+TGG | + | chr1_2:58259857-58259876 | Msa0080050:intron | 50.0% | |
| CCTCCCTATTTCGGTGACTT+GGG | + | chr1_2:58259858-58259877 | Msa0080050:intron | 50.0% | |
| GCTCCCAAGTCACCGAAATA+GGG | - | chr1_2:58259864-58259883 | None:intergenic | 50.0% | |
| TGCTCCCAAGTCACCGAAAT+AGG | - | chr1_2:58259865-58259884 | None:intergenic | 50.0% | |
| GGCATGGTCTCAAGCTACAA+AGG | + | chr1_2:58260101-58260120 | Msa0080050:intron | 50.0% | |
| TACGAAGATTGGGCAGGCAT+TGG | + | chr1_2:58260140-58260159 | Msa0080050:CDS | 50.0% | |
| AGCAGTTGTCCACCAAGTAC+AGG | + | chr1_2:58260178-58260197 | Msa0080050:CDS | 50.0% | |
| ! | GGAAGGTTTCGAGTATCGCA+CGG | - | chr1_2:58260756-58260775 | None:intergenic | 50.0% |
| GAATAGGAGCTGGCACATAC+CGG | + | chr1_2:58261041-58261060 | Msa0080050:three_prime_UTR | 50.0% | |
| ! | CCGCGGCTGTTACTGATTGT+AGG | - | chr1_2:58249593-58249612 | None:intergenic | 55.0% |
| GAGCCAGCTCCATCTTTCTC+AGG | - | chr1_2:58250930-58250949 | None:intergenic | 55.0% | |
| TGGGATCTCAGTGGAGCAAG+GGG | + | chr1_2:58251663-58251682 | Msa0080050:CDS | 55.0% | |
| ACAACAGAAGCTGTCCCCTC+TGG | - | chr1_2:58252237-58252256 | None:intergenic | 55.0% | |
| GAGGGGACAGCTTCTGTTGT+AGG | + | chr1_2:58252237-58252256 | Msa0080050:CDS | 55.0% | |
| GAAGTGAGGTCTGACCATCG+GGG | - | chr1_2:58252471-58252490 | None:intergenic | 55.0% | |
| AGGGAGAGCAATGATGCACC+AGG | + | chr1_2:58252685-58252704 | Msa0080050:CDS | 55.0% | |
| GAGTGGTAAACTGGGACTCG+TGG | - | chr1_2:58253499-58253518 | None:intergenic | 55.0% | |
| AGCAGGGCTTCACAAAGAGG+AGG | + | chr1_2:58253625-58253644 | Msa0080050:CDS | 55.0% | |
| AGTTCTCTCCTGCTCAGAGC+CGG | + | chr1_2:58253692-58253711 | Msa0080050:CDS | 55.0% | |
| !! | ATTCTATCCCGGCTCTGAGC+AGG | - | chr1_2:58253703-58253722 | None:intergenic | 55.0% |
| TGCTCAGAGCCGGGATAGAA+TGG | + | chr1_2:58253702-58253721 | Msa0080050:CDS | 55.0% | |
| ! | ATGGAAGGAACGAGCACTGC+TGG | + | chr1_2:58254020-58254039 | Msa0080050:CDS | 55.0% |
| ! | GAGCACTGCTGGAGTTCCTA+AGG | + | chr1_2:58254031-58254050 | Msa0080050:CDS | 55.0% |
| ACTGCTGGAGTTCCTAAGGG+AGG | + | chr1_2:58254035-58254054 | Msa0080050:CDS | 55.0% | |
| GCGTGTGTGTGTGTGTTGAG+AGG | - | chr1_2:58254616-58254635 | None:intergenic | 55.0% | |
| ! | ATCTGGAGTGTGGGCCGATA+GGG | + | chr1_2:58254670-58254689 | Msa0080050:intron | 55.0% |
| TCCACTGAGCCACTCCCTAT+CGG | - | chr1_2:58254687-58254706 | None:intergenic | 55.0% | |
| ! | GCATTGCAAGCCGGCTTTGT+AGG | - | chr1_2:58254763-58254782 | None:intergenic | 55.0% |
| ACAGTCCTCGCATTGCAAGC+CGG | - | chr1_2:58254772-58254791 | None:intergenic | 55.0% | |
| GCGTGTGTGTGTGTGTTGAG+AGG | - | chr1_2:58254616-58254635 | None:intergenic | 55.0% | |
| TGGACAGTCCTCGCATTGAG+AGG | - | chr1_2:58254898-58254917 | None:intergenic | 55.0% | |
| ! | CATCTGGAGTGTGGGCTGAT+AGG | + | chr1_2:58255013-58255032 | Msa0080050:intron | 55.0% |
| GACGTGATTCTAGACGGGCA+AGG | - | chr1_2:58255329-58255348 | None:intergenic | 55.0% | |
| GAGAGACAGGGAACCGAATG+TGG | - | chr1_2:58256186-58256205 | None:intergenic | 55.0% | |
| CAGTTCGATCGTCCCCAGTT+AGG | + | chr1_2:58257358-58257377 | Msa0080050:CDS | 55.0% | |
| ! | AATCCCCCCACCTTTTGTGG+AGG | + | chr1_2:58258455-58258474 | Msa0080050:intron | 55.0% |
| CTTCATCCATGGTGGCAGAG+AGG | - | chr1_2:58259609-58259628 | None:intergenic | 55.0% | |
| ! | GCTTTGGGCTTCATCCATGG+TGG | - | chr1_2:58259617-58259636 | None:intergenic | 55.0% |
| CATTGCATGTGCCTGTAGCC+TGG | - | chr1_2:58259732-58259751 | None:intergenic | 55.0% | |
| GCTACAGGCACATGCAATGC+TGG | + | chr1_2:58259733-58259752 | Msa0080050:CDS | 55.0% | |
| CTGTGGATCTTATGCCCCTC+CGG | + | chr1_2:58259781-58259800 | Msa0080050:intron | 55.0% | |
| GACTGACTGCAAAACCGGAG+GGG | - | chr1_2:58259798-58259817 | None:intergenic | 55.0% | |
| CCCAAGTCACCGAAATAGGG+AGG | - | chr1_2:58259861-58259880 | None:intergenic | 55.0% | |
| CACAGGCAACCTGTACTTGG+TGG | - | chr1_2:58260190-58260209 | None:intergenic | 55.0% | |
| GCAATACCCTCCAGCTGATG+TGG | + | chr1_2:58260695-58260714 | Msa0080050:CDS | 55.0% | |
| TCTGAGCCACATCAGCTGGA+GGG | - | chr1_2:58260704-58260723 | None:intergenic | 55.0% | |
| ATCTGAGCCACATCAGCTGG+AGG | - | chr1_2:58260705-58260724 | None:intergenic | 55.0% | |
| ! | TTCGAGTATCGCACGGTTGC+AGG | - | chr1_2:58260749-58260768 | None:intergenic | 55.0% |
| GGGATCTCAGTGGAGCAAGG+GGG | + | chr1_2:58251664-58251683 | Msa0080050:CDS | 60.0% | |
| GTTCTCTCCTGCTCAGAGCC+GGG | + | chr1_2:58253693-58253712 | Msa0080050:CDS | 60.0% | |
| ! | GACGGAGGAGAAGCATGCAG+CGG | + | chr1_2:58254113-58254132 | Msa0080050:CDS | 60.0% |
| ! | GCATGCAGCGGCACTGAAGA+AGG | + | chr1_2:58254125-58254144 | Msa0080050:CDS | 60.0% |
| ! | CATCTGGAGTGTGGGCCGAT+AGG | + | chr1_2:58254669-58254688 | Msa0080050:intron | 60.0% |
| GGGAGTGGCTCAGTGGATGT+TGG | + | chr1_2:58254690-58254709 | Msa0080050:intron | 60.0% | |
| !! | CAAAGCCGGCTTGCAATGCG+AGG | + | chr1_2:58254764-58254783 | Msa0080050:intron | 60.0% |
| GTGCGTGTGGGTGTGTTGAG+AGG | - | chr1_2:58254966-58254985 | None:intergenic | 60.0% | |
| GTGTGTGTGCGTGTGCGTGT+GGG | - | chr1_2:58254978-58254997 | None:intergenic | 60.0% | |
| TGTGTGTGTGCGTGTGCGTG+TGG | - | chr1_2:58254979-58254998 | None:intergenic | 60.0% | |
| ! | GAGTGTGGGCTGATAGGGAG+TGG | + | chr1_2:58255019-58255038 | Msa0080050:intron | 60.0% |
| GCTGATAGGGAGTGGCTCAG+TGG | + | chr1_2:58255027-58255046 | Msa0080050:intron | 60.0% | |
| GGGAGTGGCTCAGTGGATGT+TGG | + | chr1_2:58254690-58254709 | Msa0080050:intron | 60.0% | |
| GTTCCCTTGGCAAACCACGC+AGG | + | chr1_2:58257113-58257132 | Msa0080050:intron | 60.0% | |
| ! | GAAGAGGGGCGTACCTTCAC+AGG | - | chr1_2:58258094-58258113 | None:intergenic | 60.0% |
| CAGAGGCAGCTTGAGCACAG+AGG | - | chr1_2:58258966-58258985 | None:intergenic | 60.0% | |
| CGGAAACCTCTCTGCCACCA+TGG | + | chr1_2:58259600-58259619 | Msa0080050:CDS | 60.0% | |
| GCACGGTTGCAGGCTGGTAA+CGG | - | chr1_2:58260739-58260758 | None:intergenic | 60.0% | |
| AGTATCGCACGGTTGCAGGC+TGG | - | chr1_2:58260745-58260764 | None:intergenic | 60.0% | |
| TACGTACAGCGGCAGCCACC+TGG | - | chr1_2:58251902-58251921 | None:intergenic | 65.0% | |
| GGTCTGCAGCCTCGTGCTGT+TGG | + | chr1_2:58253463-58253482 | Msa0080050:intron | 65.0% | |
| GAGTGTGGGCCGATAGGGAG+TGG | + | chr1_2:58254675-58254694 | Msa0080050:intron | 65.0% | |
| GCCGATAGGGAGTGGCTCAG+TGG | + | chr1_2:58254683-58254702 | Msa0080050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 58249472 | 58261265 | 58249472 | ID=Msa0080050;Name=Msa0080050 |
| chr1_2 | mRNA | 58249472 | 58261265 | 58249472 | ID=Msa0080050-mRNA-1;Parent=Msa0080050;Name=Msa0080050-mRNA-1;_AED=0.08;_eAED=0.08;_QI=178|1|1|1|0.94|0.94|19|420|1120 |
| chr1_2 | exon | 58249472 | 58249634 | 58249472 | ID=Msa0080050-mRNA-1:exon:18570;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58250849 | 58250968 | 58250849 | ID=Msa0080050-mRNA-1:exon:18571;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58251641 | 58251739 | 58251641 | ID=Msa0080050-mRNA-1:exon:18572;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58251903 | 58251965 | 58251903 | ID=Msa0080050-mRNA-1:exon:18573;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58252219 | 58252296 | 58252219 | ID=Msa0080050-mRNA-1:exon:18574;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58252667 | 58252835 | 58252667 | ID=Msa0080050-mRNA-1:exon:18575;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58253464 | 58253723 | 58253464 | ID=Msa0080050-mRNA-1:exon:18576;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58253888 | 58254287 | 58253888 | ID=Msa0080050-mRNA-1:exon:18577;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58254418 | 58254495 | 58254418 | ID=Msa0080050-mRNA-1:exon:18578;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58255340 | 58255587 | 58255340 | ID=Msa0080050-mRNA-1:exon:18579;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58256433 | 58256717 | 58256433 | ID=Msa0080050-mRNA-1:exon:18580;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58256824 | 58257002 | 58256824 | ID=Msa0080050-mRNA-1:exon:18581;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58257114 | 58257396 | 58257114 | ID=Msa0080050-mRNA-1:exon:18582;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58257944 | 58258099 | 58257944 | ID=Msa0080050-mRNA-1:exon:18583;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58258922 | 58259071 | 58258922 | ID=Msa0080050-mRNA-1:exon:18584;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58259331 | 58259471 | 58259331 | ID=Msa0080050-mRNA-1:exon:18585;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58259557 | 58259769 | 58259557 | ID=Msa0080050-mRNA-1:exon:18586;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58260102 | 58260392 | 58260102 | ID=Msa0080050-mRNA-1:exon:18587;Parent=Msa0080050-mRNA-1 |
| chr1_2 | exon | 58260681 | 58261265 | 58260681 | ID=Msa0080050-mRNA-1:exon:18588;Parent=Msa0080050-mRNA-1 |
| chr1_2 | five_prime_UTR | 58249472 | 58249634 | 58249472 | ID=Msa0080050-mRNA-1:five_prime_utr;Parent=Msa0080050-mRNA-1 |
| chr1_2 | five_prime_UTR | 58250849 | 58250863 | 58250849 | ID=Msa0080050-mRNA-1:five_prime_utr;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58250864 | 58250968 | 58250864 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58251641 | 58251739 | 58251641 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58251903 | 58251965 | 58251903 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58252219 | 58252296 | 58252219 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58252667 | 58252835 | 58252667 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58253464 | 58253723 | 58253464 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58253888 | 58254287 | 58253888 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58254418 | 58254495 | 58254418 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58255340 | 58255587 | 58255340 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58256433 | 58256717 | 58256433 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58256824 | 58257002 | 58256824 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58257114 | 58257396 | 58257114 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58257944 | 58258099 | 58257944 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58258922 | 58259071 | 58258922 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58259331 | 58259471 | 58259331 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58259557 | 58259769 | 58259557 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58260102 | 58260392 | 58260102 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | CDS | 58260681 | 58260845 | 58260681 | ID=Msa0080050-mRNA-1:cds;Parent=Msa0080050-mRNA-1 |
| chr1_2 | three_prime_UTR | 58260846 | 58261265 | 58260846 | ID=Msa0080050-mRNA-1:three_prime_utr;Parent=Msa0080050-mRNA-1 |
| Gene Sequence |
| Protein sequence |