AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1424780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424780 MtrunA17_Chr3g0131161 96.782 404 12 1 1 404 1 403 0.0 808
Msa1424780 MtrunA17_Chr8g0356141 42.654 211 111 2 107 316 350 551 1.67e-44 165
Msa1424780 MtrunA17_Chr7g0267221 46.354 192 95 4 108 292 195 385 7.06e-44 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1424780 AT5G23610.1 41.727 278 156 4 108 385 124 395 2.64e-66 221
Msa1424780 AT5G23610.2 41.727 278 156 4 108 385 124 395 2.94e-66 220
Msa1424780 AT5G51330.1 40.000 240 127 2 70 292 257 496 3.97e-45 166
Msa1424780 AT5G51330.2 40.000 240 127 2 70 292 253 492 4.41e-45 166

Find 178 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTCTTCGCGCTTCT+TGG 0.208719 tig0025789:-53468 Msa1424780:intron
TTTCTTGCAGGAGATGTTTA+TGG 0.210272 tig0025789:-50878 Msa1424780:intron
TTACTATCTGGAAAATATAT+TGG 0.261036 tig0025789:+52612 None:intergenic
CGTAAATACATTGGTGATAC+TGG 0.271676 tig0025789:-52201 Msa1424780:CDS
CCCGCCACCATTAAACTAAA+AGG 0.280995 tig0025789:+50280 None:intergenic
AAGTTCAGTACTTCTTCATT+TGG 0.283704 tig0025789:+51926 None:intergenic
CTTAGTACAGGTCGGGTTAT+TGG 0.284312 tig0025789:+52234 None:intergenic
AGATCAAACTATACTGTAAA+AGG 0.292421 tig0025789:+50566 None:intergenic
GGTGGTTATAATCCTATTCT+AGG 0.293975 tig0025789:+50751 None:intergenic
TCCCTCCAGGTGCCACTTTA+CGG 0.303889 tig0025789:+52148 None:intergenic
GTTCAACCCTGACGGAATTA+TGG 0.307173 tig0025789:-52106 Msa1424780:CDS
TTTGCCAACCACTAAGTTCA+TGG 0.323165 tig0025789:-50644 Msa1424780:three_prime_UTR
GTATTATTGTCTTGTTGGTT+AGG 0.328584 tig0025789:-50506 Msa1424780:three_prime_UTR
GTCTTCAACAGGAATGAAAT+TGG 0.332023 tig0025789:-50531 Msa1424780:three_prime_UTR
AGACATCTCTTTGAGGTATC+AGG 0.343221 tig0025789:-50774 Msa1424780:CDS
GATGACGTCCGCGAGGAGGC+TGG 0.343634 tig0025789:-52057 Msa1424780:CDS
CATCGTCAACAGGCATTCAT+TGG 0.346643 tig0025789:-52720 Msa1424780:CDS
TGAAGTGGAGCAACATCTTA+TGG 0.347796 tig0025789:-51459 Msa1424780:CDS
CAGTATCACCAATGTATTTA+CGG 0.351183 tig0025789:+52202 None:intergenic
GGTCTTTAGGTAGGCTTTGC+CGG 0.351234 tig0025789:-50461 Msa1424780:three_prime_UTR
GTATATTAACAGGGCAAGTA+TGG 0.358640 tig0025789:-51503 Msa1424780:intron
GGATACCACCATCCACTGTT+AGG 0.358688 tig0025789:-52017 Msa1424780:CDS
CATTAGATCTACATTATTGT+AGG 0.362477 tig0025789:+50126 None:intergenic
TCTTCATTGAGTGGCTGAAT+TGG 0.364573 tig0025789:+51236 None:intergenic
CCGTCATCCTGAGTATTGTC+TGG 0.369164 tig0025789:+51338 None:intergenic
GGTTGATCCTCTTGCATTGT+GGG 0.373824 tig0025789:+51044 None:intergenic
GTGGATGGTGGTATCCAATA+GGG 0.379280 tig0025789:+52024 None:intergenic
TTAGTACAGGTCGGGTTATT+GGG 0.379451 tig0025789:+52235 None:intergenic
AACCTCTTCCATGAACTTAG+TGG 0.380359 tig0025789:+50636 None:intergenic
CTGGGGTTGATGACCCCTAT+TGG 0.380387 tig0025789:-52038 Msa1424780:CDS
AGTTCAGTACTTCTTCATTT+GGG 0.387011 tig0025789:+51927 None:intergenic
GGCCATCCGTGCCCCTTGTC+AGG 0.402712 tig0025789:-51995 Msa1424780:CDS
AGGTGTTACTGTTGTGTTAA+CGG 0.403039 tig0025789:+53681 None:intergenic
GGATTCTTTGAAGAATTTGC+AGG 0.406927 tig0025789:-51625 Msa1424780:intron
GATGTATCAAACACTGTATA+TGG 0.414656 tig0025789:-50814 Msa1424780:CDS
TTCTTCTTTACTCTTAAAAC+TGG 0.421159 tig0025789:-50713 Msa1424780:three_prime_UTR
ATTCAAATGGAAAGAAAAGA+TGG 0.422345 tig0025789:-50851 Msa1424780:CDS
CGTCAGGGTTGAACCATCTT+CGG 0.426408 tig0025789:+52115 None:intergenic
AGTGGATGGTGGTATCCAAT+AGG 0.428009 tig0025789:+52023 None:intergenic
ACCAACTCGCACTGTGTTGT+CGG 0.428213 tig0025789:-53505 Msa1424780:five_prime_UTR
AGTATGGTGAGTTCGCGATA+TGG 0.430148 tig0025789:-51487 Msa1424780:CDS
TGCAAGTGCAAGTGCTTTGT+CGG 0.430693 tig0025789:+52789 None:intergenic
TAGTTTAATGGTGGCGGGTG+GGG 0.432405 tig0025789:-50275 Msa1424780:three_prime_UTR
GAAGAAAACTTGTGAAGAAA+AGG 0.432818 tig0025789:+50730 None:intergenic
AAGTACAAGTTCTCATTGAA+TGG 0.433501 tig0025789:+50417 None:intergenic
TTTGTTTAACTTAGAGCTGC+AGG 0.433568 tig0025789:-52762 Msa1424780:five_prime_UTR
TGGTTGTATTATTGTCTTGT+TGG 0.436350 tig0025789:-50511 Msa1424780:three_prime_UTR
AAACTAGAAAGGGTGACATT+AGG 0.439013 tig0025789:+51023 None:intergenic
GAGAAAGAAGCATGACAGTA+AGG 0.439317 tig0025789:-52442 Msa1424780:CDS
GAAACTGCTTAAAATAGAAA+TGG 0.441793 tig0025789:-51950 Msa1424780:CDS
GTTGCTAATGCAGCTGACTT+TGG 0.445231 tig0025789:-52816 Msa1424780:intron
AGGATGACGGATTGGCAACT+TGG 0.448641 tig0025789:-51325 Msa1424780:CDS
TGTTTATGGATTTATTCAAA+TGG 0.448971 tig0025789:-50864 Msa1424780:CDS
AGCTGCAGGGATGGATAGGT+GGG 0.450023 tig0025789:-52748 Msa1424780:exon
GTGGGGTTATGTGTCGCATA+TGG 0.455859 tig0025789:-50258 Msa1424780:three_prime_UTR
AGTATCACCAATGTATTTAC+GGG 0.456584 tig0025789:+52203 None:intergenic
TCATCTTGTAGATGTCCTAT+AGG 0.457242 tig0025789:-50358 Msa1424780:three_prime_UTR
ATTTGAGGCAGGTCTTCAAC+AGG 0.457533 tig0025789:-50542 Msa1424780:three_prime_UTR
CGGAATTATGGAGTATTGGT+TGG 0.461416 tig0025789:-52094 Msa1424780:CDS
TTTGGATAGCAGAGATATGC+AGG 0.462744 tig0025789:-51842 Msa1424780:intron
CTGACGGAATTATGGAGTAT+TGG 0.463406 tig0025789:-52098 Msa1424780:CDS
GTGGGAGGTGCTGAAGGCAG+AGG 0.464284 tig0025789:-52274 Msa1424780:CDS
ATGACGTCCGCGAGGAGGCT+GGG 0.464713 tig0025789:-52056 Msa1424780:CDS
CAATACTCCATAATTCCGTC+AGG 0.466213 tig0025789:+52099 None:intergenic
CTAAAAGTGGTGCACTCTCT+TGG 0.466483 tig0025789:+51404 None:intergenic
TTAGTTTAATGGTGGCGGGT+GGG 0.466736 tig0025789:-50276 Msa1424780:three_prime_UTR
CAACCGCCTAACTGAAATCA+TGG 0.467995 tig0025789:-51646 Msa1424780:CDS
TTTAGTACAGGTCTTTAGGT+AGG 0.472068 tig0025789:-50470 Msa1424780:three_prime_UTR
TGAGGTATCAGGCCTAGAAT+AGG 0.473853 tig0025789:-50763 Msa1424780:exon
GTGGGGTGTTCATCGTCAAC+AGG 0.476341 tig0025789:-52730 Msa1424780:CDS
ACCTCAATAAGCTGACCATA+AGG 0.476397 tig0025789:+52507 None:intergenic
GTATAGTTTGATCTAATTTG+AGG 0.478849 tig0025789:-50557 Msa1424780:three_prime_UTR
GAGCTGCAGGGATGGATAGG+TGG 0.485530 tig0025789:-52749 Msa1424780:exon
TTTAGTTTAATGGTGGCGGG+TGG 0.486710 tig0025789:-50277 Msa1424780:three_prime_UTR
AAGAATCCATGATTTCAGTT+AGG 0.487830 tig0025789:+51640 None:intergenic
TGGGAGGTGCTGAAGGCAGA+GGG 0.492323 tig0025789:-52273 Msa1424780:CDS
AGCTGATCTTAGTACAGGTC+GGG 0.496477 tig0025789:+52227 None:intergenic
AGCATGACAGTAAGGATAGA+TGG 0.497539 tig0025789:-52434 Msa1424780:CDS
GGACTGATCGGTTCCGAAGA+TGG 0.500965 tig0025789:-52128 Msa1424780:CDS
GCCTTATGGTCAGCTTATTG+AGG 0.505640 tig0025789:-52508 Msa1424780:CDS
TGACGTCCGCGAGGAGGCTG+GGG 0.505696 tig0025789:-52055 Msa1424780:CDS
CTAGCTAACATGTAAAATAC+CGG 0.506948 tig0025789:+50442 None:intergenic
GACTATGATTTGAGCAATGT+GGG 0.508900 tig0025789:-53615 Msa1424780:five_prime_UTR
AGGTTGATCCTCTTGCATTG+TGG 0.510835 tig0025789:+51043 None:intergenic
AGTTTGATCTAATTTGAGGC+AGG 0.512861 tig0025789:-50553 Msa1424780:three_prime_UTR
TTGGTTGGAGAGGGCTGACT+TGG 0.513352 tig0025789:-52079 Msa1424780:CDS
ATCCTGACAAGGGGCACGGA+TGG 0.514234 tig0025789:+51993 None:intergenic
TTAGTCAGTTCTTCATTGAG+TGG 0.514458 tig0025789:+51227 None:intergenic
GAGGTGAAAGAGGAGTATGC+TGG 0.516120 tig0025789:-52489 Msa1424780:CDS
GAAGAATCAGCATCCTGACA+AGG 0.520021 tig0025789:+51982 None:intergenic
TTAGAGCTGCAGGGATGGAT+AGG 0.521038 tig0025789:-52752 Msa1424780:exon
ATGAAGTAGACATCTCTTTG+AGG 0.522762 tig0025789:-50781 Msa1424780:CDS
GTCAACAGGCATTCATTGGT+TGG 0.523113 tig0025789:-52716 Msa1424780:CDS
TTCTGTTACTAGGAAGGAAG+AGG 0.524484 tig0025789:-52676 Msa1424780:CDS
GACGGATTGGCAACTTGGAT+AGG 0.527728 tig0025789:-51320 Msa1424780:CDS
CTGAATTGGCATGCCTGAGT+AGG 0.528503 tig0025789:+51250 None:intergenic
AACCACTAAGTTCATGGAAG+AGG 0.533655 tig0025789:-50638 Msa1424780:three_prime_UTR
GGTCAATGTGCTTCAGTAAG+TGG 0.534563 tig0025789:+52169 None:intergenic
CGGGCAGCTGATCTTAGTAC+AGG 0.536563 tig0025789:+52222 None:intergenic
GAAGCTTAGAGAGGTGAAAG+AGG 0.537563 tig0025789:-52532 Msa1424780:CDS
TTGAAATAATAGTCATGTTG+AGG 0.537928 tig0025789:-51075 Msa1424780:intron
CAGCTGATCTTAGTACAGGT+CGG 0.541011 tig0025789:+52226 None:intergenic
ACGGATTGGCAACTTGGATA+GGG 0.541184 tig0025789:-51319 Msa1424780:CDS
AAGCATGTGGGAGGTGCTGA+AGG 0.543073 tig0025789:-52280 Msa1424780:CDS
TTTCTTGAAGATCCCTACTC+AGG 0.547860 tig0025789:-51263 Msa1424780:CDS
TCACCTCTCTAAGCTGACTA+AGG 0.547878 tig0025789:+52571 None:intergenic
AAAGATGGAGCAGCAGCTGT+TGG 0.548685 tig0025789:-50836 Msa1424780:CDS
TTCTGAAGGAGGACTAAAAG+TGG 0.548840 tig0025789:+51391 None:intergenic
GATACCACCATCCACTGTTA+GGG 0.550025 tig0025789:-52016 Msa1424780:CDS
GAAAACTGAAAGTAACATGA+TGG 0.552332 tig0025789:-51797 Msa1424780:CDS
GGAGGTGCTGAAGGCAGAGG+GGG 0.552568 tig0025789:-52271 Msa1424780:CDS
TATGGAGTATTGGTTGGAGA+GGG 0.553818 tig0025789:-52088 Msa1424780:CDS
AGGTGAAAGAGGAGTATGCT+GGG 0.555325 tig0025789:-52488 Msa1424780:CDS
TTGTTTAACTTAGAGCTGCA+GGG 0.555987 tig0025789:-52761 Msa1424780:five_prime_UTR
CGGAACCGATCAGTCCCTCC+AGG 0.556285 tig0025789:+52135 None:intergenic
TTAACTTAGAGCTGCAGGGA+TGG 0.557996 tig0025789:-52757 Msa1424780:exon
GAAAACTTGTGAAGAAAAGG+TGG 0.559690 tig0025789:+50733 None:intergenic
TTAGAATTCAACATCAGTGA+AGG 0.562148 tig0025789:+50199 None:intergenic
CAATTTGCAGCTCAACAAGC+AGG 0.562189 tig0025789:+50605 None:intergenic
CTCTAAGCTGACTAAGGCTG+AGG 0.562519 tig0025789:+52577 None:intergenic
GCAGGAGCTCATTGCCCAGA+AGG 0.562853 tig0025789:-51824 Msa1424780:CDS
AAGAACTGACTAACAAGAAG+AGG 0.565105 tig0025789:-51217 Msa1424780:intron
TGCAGCTCAACAAGCAGGTG+AGG 0.569589 tig0025789:+50610 None:intergenic
GAAGCACATTGACCGTAAAG+TGG 0.570384 tig0025789:-52160 Msa1424780:CDS
CTAAAAGGCAAGAGTAGCGA+GGG 0.571358 tig0025789:+50295 None:intergenic
TGAATTGGCATGCCTGAGTA+GGG 0.572022 tig0025789:+51251 None:intergenic
CGCGATATGGAAAACTGAAG+TGG 0.573314 tig0025789:-51474 Msa1424780:CDS
TCAGCTTATTGAGGTGAAAG+AGG 0.574832 tig0025789:-52499 Msa1424780:CDS
AATCCATGATTTCAGTTAGG+CGG 0.575656 tig0025789:+51643 None:intergenic
TGGCACCTGGAGGGACTGAT+CGG 0.577271 tig0025789:-52140 Msa1424780:CDS
CGTCATCCTGAGTATTGTCT+GGG 0.578265 tig0025789:+51339 None:intergenic
CGAAGATGGTTCAACCCTGA+CGG 0.579824 tig0025789:-52114 Msa1424780:CDS
TACTAGGAAGGAAGAGGACT+CGG 0.580045 tig0025789:-52670 Msa1424780:CDS
ATTGTAGTATATGCCAAGGT+AGG 0.581707 tig0025789:+50167 None:intergenic
CTTGGATGACGTCCGCGAGG+AGG 0.584682 tig0025789:-52061 Msa1424780:CDS
TCTTCCATGAACTTAGTGGT+TGG 0.588265 tig0025789:+50640 None:intergenic
CAGCATCCTGACAAGGGGCA+CGG 0.588448 tig0025789:+51989 None:intergenic
CAATACTCAGGATGACGGAT+TGG 0.588917 tig0025789:-51333 Msa1424780:CDS
CGGATGGCCCTAACAGTGGA+TGG 0.589422 tig0025789:+52009 None:intergenic
CTTGCAAGGAACTTATGAAG+TGG 0.591648 tig0025789:-51683 Msa1424780:CDS
TCTTCAAGAAAACACTCTTG+TGG 0.592785 tig0025789:+51275 None:intergenic
TCTTCCTTCCTAGTAACAGA+AGG 0.594292 tig0025789:+52678 None:intergenic
TTATGGAGTATTGGTTGGAG+AGG 0.594798 tig0025789:-52089 Msa1424780:CDS
ACCGTAAAGTGGCACCTGGA+GGG 0.600671 tig0025789:-52149 Msa1424780:CDS
TCAGCTGCCCGTAAATACAT+TGG 0.601607 tig0025789:-52210 Msa1424780:CDS
GAGGTGAAAGAGGAGCCTTA+TGG 0.602537 tig0025789:-52522 Msa1424780:CDS
AGGATAGATGGTCAAGCGAG+AGG 0.602598 tig0025789:-52422 Msa1424780:intron
GGGCATAAGAACAACTTAGT+CGG 0.603284 tig0025789:+50315 None:intergenic
CAGCCTTAGTCAGCTTAGAG+AGG 0.603304 tig0025789:-52574 Msa1424780:CDS
CACTAACCCAGACAATACTC+AGG 0.613204 tig0025789:-51345 Msa1424780:CDS
AAGAATCAGCATCCTGACAA+GGG 0.613306 tig0025789:+51983 None:intergenic
TAGAATTCAACATCAGTGAA+GGG 0.620272 tig0025789:+50200 None:intergenic
AATCTAATGTAGGTACAAGT+CGG 0.623854 tig0025789:-52310 Msa1424780:intron
GAATATTGTAGTATATGCCA+AGG 0.623890 tig0025789:+50163 None:intergenic
GGCACGGATGGCCCTAACAG+TGG 0.626312 tig0025789:+52005 None:intergenic
ATTGACCGTAAAGTGGCACC+TGG 0.626391 tig0025789:-52153 Msa1424780:CDS
GCTGATACCCACAATGCAAG+AGG 0.632260 tig0025789:-51051 Msa1424780:CDS
ACTAAAAGGCAAGAGTAGCG+AGG 0.637851 tig0025789:+50294 None:intergenic
CCAGACAATACTCAGGATGA+CGG 0.639358 tig0025789:-51338 Msa1424780:CDS
TGACTATGATTTGAGCAATG+TGG 0.639748 tig0025789:-53616 Msa1424780:five_prime_UTR
GCCGACAACACAGTGCGAGT+TGG 0.640849 tig0025789:+53504 None:intergenic
TGGATGGTGGTATCCAATAG+GGG 0.643639 tig0025789:+52025 None:intergenic
AGTCGGCTGAACAAAGCATG+TGG 0.643899 tig0025789:-52293 Msa1424780:CDS
GTCGGCTGAACAAAGCATGT+GGG 0.649689 tig0025789:-52292 Msa1424780:CDS
GTCTTGTGAGAAGCTTAGAG+AGG 0.651620 tig0025789:-52541 Msa1424780:CDS
GGCTGAACAAAGCATGTGGG+AGG 0.654214 tig0025789:-52289 Msa1424780:CDS
AACTGAAAGTAACATGATGG+AGG 0.656525 tig0025789:-51794 Msa1424780:intron
CATCAACCCCAGCCTCCTCG+CGG 0.661718 tig0025789:+52049 None:intergenic
AGAATCAGCATCCTGACAAG+GGG 0.662008 tig0025789:+51984 None:intergenic
GGGAGGTGCTGAAGGCAGAG+GGG 0.662463 tig0025789:-52272 Msa1424780:CDS
GACCGTAAAGTGGCACCTGG+AGG 0.665408 tig0025789:-52150 Msa1424780:CDS
TCTTTCACTACTTTCTCGCG+AGG 0.672061 tig0025789:+53661 None:intergenic
AATACTCCATAATTCCGTCA+GGG 0.681790 tig0025789:+52100 None:intergenic
TCAATGGCAGAAGACTTGCA+AGG 0.688837 tig0025789:-51697 Msa1424780:intron
GCTGCAGGGATGGATAGGTG+GGG 0.693071 tig0025789:-52747 Msa1424780:exon
ATGGCCCTAACAGTGGATGG+TGG 0.700088 tig0025789:+52012 None:intergenic
ACTATGATTTGAGCAATGTG+GGG 0.707382 tig0025789:-53614 Msa1424780:five_prime_UTR
TGACTTGGATGACGTCCGCG+AGG 0.712793 tig0025789:-52064 Msa1424780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCCTAATAATTTTATT+TGG - tig0025789:51907-51926 Msa1424780:intron 10.0%
!! ATTAACTCTATATAATTACT+TGG + tig0025789:51432-51451 None:intergenic 15.0%
!!! TGAATGCTTTAATATTTTAA+TGG - tig0025789:52003-52022 Msa1424780:CDS 15.0%
!! GTATATATTCAAGATTTAAT+GGG - tig0025789:52164-52183 Msa1424780:CDS 15.0%
!! TTACTATCTGGAAAATATAT+TGG + tig0025789:51158-51177 None:intergenic 20.0%
!! GCTATCCAAATAAAATTATT+AGG + tig0025789:51915-51934 None:intergenic 20.0%
!! GGTATATATTCAAGATTTAA+TGG - tig0025789:52163-52182 Msa1424780:CDS 20.0%
!!! AAATTAACTTTTTTCCTTCT+TGG + tig0025789:52648-52667 None:intergenic 20.0%
!! AATAGATCATGAATATAAGA+AGG + tig0025789:52866-52885 None:intergenic 20.0%
!! TGTTTATGGATTTATTCAAA+TGG - tig0025789:52903-52922 Msa1424780:intron 20.0%
!!! TTCTCTTCTTACGTTATTTT+TGG - tig0025789:50236-50255 Msa1424780:three_prime_UTR 25.0%
! ATTGAAAAAATGGGAGAAAT+TGG + tig0025789:50340-50359 None:intergenic 25.0%
! AAAACGCGAATTGAAAAAAT+GGG + tig0025789:50349-50368 None:intergenic 25.0%
!! TCGTACTTTGTTTCTTAATT+TGG - tig0025789:50406-50425 Msa1424780:three_prime_UTR 25.0%
!! CGTACTTTGTTTCTTAATTT+GGG - tig0025789:50407-50426 Msa1424780:three_prime_UTR 25.0%
!! TTGTTTCTTAATTTGGGATT+AGG - tig0025789:50413-50432 Msa1424780:three_prime_UTR 25.0%
!! TGTTTCTTAATTTGGGATTA+GGG - tig0025789:50414-50433 Msa1424780:three_prime_UTR 25.0%
!!! TTGATTACTCTTTGATTTGA+TGG - tig0025789:50563-50582 Msa1424780:three_prime_UTR 25.0%
! AGGTTATATAGAGAAGATAT+TGG - tig0025789:50607-50626 Msa1424780:three_prime_UTR 25.0%
! AGTAAAAACATTGGATTTCT+TGG + tig0025789:50702-50721 None:intergenic 25.0%
! AATAGCTCATACATTAGAAA+AGG + tig0025789:50731-50750 None:intergenic 25.0%
!! TTTTCTAATGTATGAGCTAT+TGG - tig0025789:50730-50749 Msa1424780:three_prime_UTR 25.0%
! TTTCTAATGTATGAGCTATT+GGG - tig0025789:50731-50750 Msa1424780:three_prime_UTR 25.0%
! TTACAAACGACAGTTAATTA+TGG + tig0025789:50786-50805 None:intergenic 25.0%
! ATATGTGATTAAATCAACCT+TGG - tig0025789:50870-50889 Msa1424780:CDS 25.0%
!! ATTTTCCAGATAGTAAGAAA+AGG - tig0025789:51162-51181 Msa1424780:intron 25.0%
! AACTCTATATAATTACTTGG+TGG + tig0025789:51429-51448 None:intergenic 25.0%
! TTAATCATGCAATCTAATGT+AGG - tig0025789:51447-51466 Msa1424780:CDS 25.0%
! GAAACTGCTTAAAATAGAAA+TGG - tig0025789:51817-51836 Msa1424780:CDS 25.0%
! TGCTTTATGTTGAATTTCAA+TGG - tig0025789:52054-52073 Msa1424780:CDS 25.0%
! GGAGAAATCAAACAAATAAA+AGG + tig0025789:52213-52232 None:intergenic 25.0%
!! TGTAGTTCTGTATATTAACA+GGG - tig0025789:52255-52274 Msa1424780:CDS 25.0%
! CAACATGACTATTATTTCAA+AGG + tig0025789:52692-52711 None:intergenic 25.0%
! TTGAAATAATAGTCATGTTG+AGG - tig0025789:52692-52711 Msa1424780:CDS 25.0%
! AACAACTCAAAAACTAGAAA+GGG + tig0025789:52757-52776 None:intergenic 25.0%
! TAACAACTCAAAAACTAGAA+AGG + tig0025789:52758-52777 None:intergenic 25.0%
!!! TGATCTATTATTTTTCTTGC+AGG - tig0025789:52877-52896 Msa1424780:intron 25.0%
! ATTCAAATGGAAAGAAAAGA+TGG - tig0025789:52916-52935 Msa1424780:intron 25.0%
! TTCTTCTTTACTCTTAAAAC+TGG - tig0025789:53054-53073 Msa1424780:intron 25.0%
! AGATCAAACTATACTGTAAA+AGG + tig0025789:53204-53223 None:intergenic 25.0%
! GTATAGTTTGATCTAATTTG+AGG - tig0025789:53210-53229 Msa1424780:intron 25.0%
!! ATTTTGTAATTCACACCTAT+AGG + tig0025789:53427-53446 None:intergenic 25.0%
!! CTAATATAATTTTCCTACCT+TGG - tig0025789:53587-53606 Msa1424780:five_prime_UTR 25.0%
! CATTAGATCTACATTATTGT+AGG + tig0025789:53644-53663 None:intergenic 25.0%
!!! TAATCTGTTTTTGCATGTTA+AGG + tig0025789:53676-53695 None:intergenic 25.0%
AAAATGGGAGAAATTGGAAA+AGG + tig0025789:50334-50353 None:intergenic 30.0%
CAAAACGCGAATTGAAAAAA+TGG + tig0025789:50350-50369 None:intergenic 30.0%
!! TTCGTGATAATGTATTTTGC+TGG - tig0025789:50525-50544 Msa1424780:three_prime_UTR 30.0%
! ATAGAGAAGATATTGGTTGT+AGG - tig0025789:50614-50633 Msa1424780:three_prime_UTR 30.0%
! TAGAGAAGATATTGGTTGTA+GGG - tig0025789:50615-50634 Msa1424780:three_prime_UTR 30.0%
CAATAACCTAAAAGCTTAGT+AGG + tig0025789:50911-50930 None:intergenic 30.0%
AATCTAATGTAGGTACAAGT+CGG - tig0025789:51457-51476 Msa1424780:CDS 30.0%
AGTATCACCAATGTATTTAC+GGG + tig0025789:51567-51586 None:intergenic 30.0%
CAGTATCACCAATGTATTTA+CGG + tig0025789:51568-51587 None:intergenic 30.0%
AGTTCAGTACTTCTTCATTT+GGG + tig0025789:51843-51862 None:intergenic 30.0%
AAGTTCAGTACTTCTTCATT+TGG + tig0025789:51844-51863 None:intergenic 30.0%
! TTCAGTTTTCTTTTCCTTCT+GGG + tig0025789:51960-51979 None:intergenic 30.0%
! TTTCAGTTTTCTTTTCCTTC+TGG + tig0025789:51961-51980 None:intergenic 30.0%
GAAAACTGAAAGTAACATGA+TGG - tig0025789:51970-51989 Msa1424780:CDS 30.0%
AAGAATCCATGATTTCAGTT+AGG + tig0025789:52130-52149 None:intergenic 30.0%
TAAGTCAGATATCACATAAG+TGG + tig0025789:52234-52253 None:intergenic 30.0%
! CTGTAGTTCTGTATATTAAC+AGG - tig0025789:52254-52273 Msa1424780:CDS 30.0%
!! CAATCTTTCCATTTTTCTGA+AGG + tig0025789:52393-52412 None:intergenic 30.0%
CTTCAGAAAAATGGAAAGAT+TGG - tig0025789:52391-52410 Msa1424780:intron 30.0%
TTGACATGTTGATATGTTTC+AGG - tig0025789:52787-52806 Msa1424780:five_prime_UTR 30.0%
AAGGAAAAAATGGGAATAAG+TGG + tig0025789:52837-52856 None:intergenic 30.0%
AGATCATGAATATAAGAAGG+TGG + tig0025789:52863-52882 None:intergenic 30.0%
GATGTATCAAACACTGTATA+TGG - tig0025789:52953-52972 Msa1424780:intron 30.0%
GAAGAAAACTTGTGAAGAAA+AGG + tig0025789:53040-53059 None:intergenic 30.0%
TGGTTGTATTATTGTCTTGT+TGG - tig0025789:53256-53275 Msa1424780:intron 30.0%
! GTATTATTGTCTTGTTGGTT+AGG - tig0025789:53261-53280 Msa1424780:intron 30.0%
!! TTACCAGTTCTTTTTAGTAC+AGG - tig0025789:53285-53304 Msa1424780:intron 30.0%
!! TCTTTTTAGTACAGGTCTTT+AGG - tig0025789:53293-53312 Msa1424780:intron 30.0%
CTAGCTAACATGTAAAATAC+CGG + tig0025789:53328-53347 None:intergenic 30.0%
AAGTACAAGTTCTCATTGAA+TGG + tig0025789:53353-53372 None:intergenic 30.0%
!!! ACTCTTGCCTTTTAGTTTAA+TGG - tig0025789:53480-53499 Msa1424780:five_prime_UTR 30.0%
TAGAATTCAACATCAGTGAA+GGG + tig0025789:53570-53589 None:intergenic 30.0%
TTAGAATTCAACATCAGTGA+AGG + tig0025789:53571-53590 None:intergenic 30.0%
GAATATTGTAGTATATGCCA+AGG + tig0025789:53607-53626 None:intergenic 30.0%
!! AGGTGTTACTGTTGTGTTAA+CGG + tig0025789:50089-50108 None:intergenic 35.0%
TGACTATGATTTGAGCAATG+TGG - tig0025789:50151-50170 Msa1424780:three_prime_UTR 35.0%
GACTATGATTTGAGCAATGT+GGG - tig0025789:50152-50171 Msa1424780:three_prime_UTR 35.0%
ACTATGATTTGAGCAATGTG+GGG - tig0025789:50153-50172 Msa1424780:three_prime_UTR 35.0%
GAAACAAAGTACGAAGAAAC+TGG + tig0025789:50400-50419 None:intergenic 35.0%
TAGTGAAGTGAAATGCGATA+AGG - tig0025789:50587-50606 Msa1424780:three_prime_UTR 35.0%
AGGCAAGCAAGTAAAAACAT+TGG + tig0025789:50711-50730 None:intergenic 35.0%
! TTTGTTTAACTTAGAGCTGC+AGG - tig0025789:51005-51024 Msa1424780:intron 35.0%
! TTGTTTAACTTAGAGCTGCA+GGG - tig0025789:51006-51025 Msa1424780:intron 35.0%
! GTTCTTTTCCTTCTGTTACT+AGG - tig0025789:51081-51100 Msa1424780:intron 35.0%
! TTTTCCTTCTGTTACTAGGA+AGG - tig0025789:51085-51104 Msa1424780:intron 35.0%
! CGTAAATACATTGGTGATAC+TGG - tig0025789:51566-51585 Msa1424780:intron 35.0%
AATACTCCATAATTCCGTCA+GGG + tig0025789:51670-51689 None:intergenic 35.0%
AACTGAAAGTAACATGATGG+AGG - tig0025789:51973-51992 Msa1424780:CDS 35.0%
AATCCATGATTTCAGTTAGG+CGG + tig0025789:52127-52146 None:intergenic 35.0%
! GGATTCTTTGAAGAATTTGC+AGG - tig0025789:52142-52161 Msa1424780:CDS 35.0%
GTATATTAACAGGGCAAGTA+TGG - tig0025789:52264-52283 Msa1424780:CDS 35.0%
TTAGTCCTCCTTCAGAAAAA+TGG - tig0025789:52382-52401 Msa1424780:intron 35.0%
!! TCTTTCCATTTTTCTGAAGG+AGG + tig0025789:52390-52409 None:intergenic 35.0%
TCTTCAAGAAAACACTCTTG+TGG + tig0025789:52495-52514 None:intergenic 35.0%
TTAGTCAGTTCTTCATTGAG+TGG + tig0025789:52543-52562 None:intergenic 35.0%
AAGAACTGACTAACAAGAAG+AGG - tig0025789:52550-52569 Msa1424780:CDS 35.0%
AAACTAGAAAGGGTGACATT+AGG + tig0025789:52747-52766 None:intergenic 35.0%
AGGTGGTAGAAGGAAAAAAT+GGG + tig0025789:52846-52865 None:intergenic 35.0%
AAGGTGGTAGAAGGAAAAAA+TGG + tig0025789:52847-52866 None:intergenic 35.0%
GAATATAAGAAGGTGGTAGA+AGG + tig0025789:52856-52875 None:intergenic 35.0%
TTTCTTGCAGGAGATGTTTA+TGG - tig0025789:52889-52908 Msa1424780:intron 35.0%
ATGAAGTAGACATCTCTTTG+AGG - tig0025789:52986-53005 Msa1424780:intron 35.0%
GGTGGTTATAATCCTATTCT+AGG + tig0025789:53019-53038 None:intergenic 35.0%
GAAAACTTGTGAAGAAAAGG+TGG + tig0025789:53037-53056 None:intergenic 35.0%
! AGTTTGATCTAATTTGAGGC+AGG - tig0025789:53214-53233 Msa1424780:intron 35.0%
GTCTTCAACAGGAATGAAAT+TGG - tig0025789:53236-53255 Msa1424780:intron 35.0%
AGACCTGTACTAAAAAGAAC+TGG + tig0025789:53291-53310 None:intergenic 35.0%
TTTAGTACAGGTCTTTAGGT+AGG - tig0025789:53297-53316 Msa1424780:intron 35.0%
TCATCTTGTAGATGTCCTAT+AGG - tig0025789:53409-53428 Msa1424780:intron 35.0%
!!! CTTGCCTTTTAGTTTAATGG+TGG - tig0025789:53483-53502 Msa1424780:five_prime_UTR 35.0%
ATTGTAGTATATGCCAAGGT+AGG + tig0025789:53603-53622 None:intergenic 35.0%
!!! CTGTTTTTGCATGTTAAGGT+AGG + tig0025789:53672-53691 None:intergenic 35.0%
! TTTGAGCAATGTGGGGTTTT+TGG - tig0025789:50160-50179 Msa1424780:three_prime_UTR 40.0%
! AATCAACCTTGGTGATCCAA+TGG - tig0025789:50881-50900 Msa1424780:intron 40.0%
AAGCTTAGTAGGTGATCCAT+TGG + tig0025789:50900-50919 None:intergenic 40.0%
! GGATCACCTACTAAGCTTTT+AGG - tig0025789:50902-50921 Msa1424780:intron 40.0%
TCTTCCTTCCTAGTAACAGA+AGG + tig0025789:51092-51111 None:intergenic 40.0%
TTCTGTTACTAGGAAGGAAG+AGG - tig0025789:51091-51110 Msa1424780:intron 40.0%
! CGCTTCCTTTTCTTACTATC+TGG + tig0025789:51170-51189 None:intergenic 40.0%
ACCTCAATAAGCTGACCATA+AGG + tig0025789:51263-51282 None:intergenic 40.0%
TCAGCTTATTGAGGTGAAAG+AGG - tig0025789:51268-51287 Msa1424780:CDS 40.0%
! GAGAAAGAAGCATGACAGTA+AGG - tig0025789:51325-51344 Msa1424780:CDS 40.0%
AGCATGACAGTAAGGATAGA+TGG - tig0025789:51333-51352 Msa1424780:CDS 40.0%
TTAGTACAGGTCGGGTTATT+GGG + tig0025789:51535-51554 None:intergenic 40.0%
CAATACTCCATAATTCCGTC+AGG + tig0025789:51671-51690 None:intergenic 40.0%
CTGACGGAATTATGGAGTAT+TGG - tig0025789:51669-51688 Msa1424780:CDS 40.0%
!! CGGAATTATGGAGTATTGGT+TGG - tig0025789:51673-51692 Msa1424780:CDS 40.0%
!! TTATGGAGTATTGGTTGGAG+AGG - tig0025789:51678-51697 Msa1424780:CDS 40.0%
!! TATGGAGTATTGGTTGGAGA+GGG - tig0025789:51679-51698 Msa1424780:CDS 40.0%
AAGAATCAGCATCCTGACAA+GGG + tig0025789:51787-51806 None:intergenic 40.0%
TTTGGATAGCAGAGATATGC+AGG - tig0025789:51925-51944 Msa1424780:intron 40.0%
CTTGCAAGGAACTTATGAAG+TGG - tig0025789:52084-52103 Msa1424780:CDS 40.0%
TGAAGTGGAGCAACATCTTA+TGG - tig0025789:52308-52327 Msa1424780:intron 40.0%
! TTCTGAAGGAGGACTAAAAG+TGG + tig0025789:52379-52398 None:intergenic 40.0%
TTTCTTGAAGATCCCTACTC+AGG - tig0025789:52504-52523 Msa1424780:CDS 40.0%
TCTTCATTGAGTGGCTGAAT+TGG + tig0025789:52534-52553 None:intergenic 40.0%
!! AGACATCTCTTTGAGGTATC+AGG - tig0025789:52993-53012 Msa1424780:intron 40.0%
TTTGCCAACCACTAAGTTCA+TGG - tig0025789:53123-53142 Msa1424780:intron 40.0%
TCTTCCATGAACTTAGTGGT+TGG + tig0025789:53130-53149 None:intergenic 40.0%
AACCACTAAGTTCATGGAAG+AGG - tig0025789:53129-53148 Msa1424780:intron 40.0%
AACCTCTTCCATGAACTTAG+TGG + tig0025789:53134-53153 None:intergenic 40.0%
GGGCATAAGAACAACTTAGT+CGG + tig0025789:53455-53474 None:intergenic 40.0%
!!! GCCTTTTAGTTTAATGGTGG+CGG - tig0025789:53486-53505 Msa1424780:five_prime_UTR 40.0%
!!! CCTTTTAGTTTAATGGTGGC+GGG - tig0025789:53487-53506 Msa1424780:five_prime_UTR 40.0%
TCTTTCACTACTTTCTCGCG+AGG + tig0025789:50109-50128 None:intergenic 45.0%
! GTTGCTAATGCAGCTGACTT+TGG - tig0025789:50951-50970 Msa1424780:intron 45.0%
TGCAAGTGCAAGTGCTTTGT+CGG + tig0025789:50981-51000 None:intergenic 45.0%
TTAACTTAGAGCTGCAGGGA+TGG - tig0025789:51010-51029 Msa1424780:intron 45.0%
CATCGTCAACAGGCATTCAT+TGG - tig0025789:51047-51066 Msa1424780:CDS 45.0%
GTCAACAGGCATTCATTGGT+TGG - tig0025789:51051-51070 Msa1424780:CDS 45.0%
TACTAGGAAGGAAGAGGACT+CGG - tig0025789:51097-51116 Msa1424780:intron 45.0%
TCACCTCTCTAAGCTGACTA+AGG + tig0025789:51199-51218 None:intergenic 45.0%
GTCTTGTGAGAAGCTTAGAG+AGG - tig0025789:51226-51245 Msa1424780:CDS 45.0%
GAAGCTTAGAGAGGTGAAAG+AGG - tig0025789:51235-51254 Msa1424780:CDS 45.0%
GCCTTATGGTCAGCTTATTG+AGG - tig0025789:51259-51278 Msa1424780:CDS 45.0%
! AGGTGAAAGAGGAGTATGCT+GGG - tig0025789:51279-51298 Msa1424780:CDS 45.0%
CTTAGTACAGGTCGGGTTAT+TGG + tig0025789:51536-51555 None:intergenic 45.0%
AGCTGATCTTAGTACAGGTC+GGG + tig0025789:51543-51562 None:intergenic 45.0%
CAGCTGATCTTAGTACAGGT+CGG + tig0025789:51544-51563 None:intergenic 45.0%
TCAGCTGCCCGTAAATACAT+TGG - tig0025789:51557-51576 Msa1424780:intron 45.0%
GGTCAATGTGCTTCAGTAAG+TGG + tig0025789:51601-51620 None:intergenic 45.0%
GAAGCACATTGACCGTAAAG+TGG - tig0025789:51607-51626 Msa1424780:intron 45.0%
GTTCAACCCTGACGGAATTA+TGG - tig0025789:51661-51680 Msa1424780:CDS 45.0%
! TGGATGGTGGTATCCAATAG+GGG + tig0025789:51745-51764 None:intergenic 45.0%
! GTGGATGGTGGTATCCAATA+GGG + tig0025789:51746-51765 None:intergenic 45.0%
! AGTGGATGGTGGTATCCAAT+AGG + tig0025789:51747-51766 None:intergenic 45.0%
GATACCACCATCCACTGTTA+GGG - tig0025789:51751-51770 Msa1424780:intron 45.0%
AGAATCAGCATCCTGACAAG+GGG + tig0025789:51786-51805 None:intergenic 45.0%
GAAGAATCAGCATCCTGACA+AGG + tig0025789:51788-51807 None:intergenic 45.0%
TCAATGGCAGAAGACTTGCA+AGG - tig0025789:52070-52089 Msa1424780:CDS 45.0%
CAACCGCCTAACTGAAATCA+TGG - tig0025789:52121-52140 Msa1424780:CDS 45.0%
AGTATGGTGAGTTCGCGATA+TGG - tig0025789:52280-52299 Msa1424780:CDS 45.0%
CGCGATATGGAAAACTGAAG+TGG - tig0025789:52293-52312 Msa1424780:CDS 45.0%
CTAAAAGTGGTGCACTCTCT+TGG + tig0025789:52366-52385 None:intergenic 45.0%
CACTAACCCAGACAATACTC+AGG - tig0025789:52422-52441 Msa1424780:intron 45.0%
! CGTCATCCTGAGTATTGTCT+GGG + tig0025789:52431-52450 None:intergenic 45.0%
CCAGACAATACTCAGGATGA+CGG - tig0025789:52429-52448 Msa1424780:CDS 45.0%
!! CAATACTCAGGATGACGGAT+TGG - tig0025789:52434-52453 Msa1424780:CDS 45.0%
!! ACGGATTGGCAACTTGGATA+GGG - tig0025789:52448-52467 Msa1424780:CDS 45.0%
TGAATTGGCATGCCTGAGTA+GGG + tig0025789:52519-52538 None:intergenic 45.0%
AGATGTGCGTGCATGTTTGA+GGG + tig0025789:52608-52627 None:intergenic 45.0%
!! TCTTGGTTTTTCCACCTCCA+AGG + tig0025789:52631-52650 None:intergenic 45.0%
TGGAGGTGGAAAAACCAAGA+AGG - tig0025789:52631-52650 Msa1424780:CDS 45.0%
GGTTGATCCTCTTGCATTGT+GGG + tig0025789:52726-52745 None:intergenic 45.0%
! AGGTTGATCCTCTTGCATTG+TGG + tig0025789:52727-52746 None:intergenic 45.0%
! TGAGGTATCAGGCCTAGAAT+AGG - tig0025789:53004-53023 Msa1424780:intron 45.0%
CAATTTGCAGCTCAACAAGC+AGG + tig0025789:53165-53184 None:intergenic 45.0%
! ATTTGAGGCAGGTCTTCAAC+AGG - tig0025789:53225-53244 Msa1424780:intron 45.0%
CTAAAAGGCAAGAGTAGCGA+GGG + tig0025789:53475-53494 None:intergenic 45.0%
ACTAAAAGGCAAGAGTAGCG+AGG + tig0025789:53476-53495 None:intergenic 45.0%
CCCGCCACCATTAAACTAAA+AGG + tig0025789:53490-53509 None:intergenic 45.0%
!! TTTAGTTTAATGGTGGCGGG+TGG - tig0025789:53490-53509 Msa1424780:five_prime_UTR 45.0%
!! TTAGTTTAATGGTGGCGGGT+GGG - tig0025789:53491-53510 Msa1424780:five_prime_UTR 45.0%
!!! AATATCAAAATAATATTTTA+TGG - tig0025789:51872-51891 Msa1424780:intron 5.0%
!! GAGCAATGTGGGGTTTTTGG+CGG - tig0025789:50163-50182 Msa1424780:three_prime_UTR 50.0%
!!! ATGTGGGGTTTTTGGCGGTT+AGG - tig0025789:50168-50187 Msa1424780:three_prime_UTR 50.0%
!!! TGTGGGGTTTTTGGCGGTTA+GGG - tig0025789:50169-50188 Msa1424780:three_prime_UTR 50.0%
ACCAACTCGCACTGTGTTGT+CGG - tig0025789:50262-50281 Msa1424780:three_prime_UTR 50.0%
TCTCTCTTCTTCGCGCTTCT+TGG - tig0025789:50299-50318 Msa1424780:three_prime_UTR 50.0%
TCTTCTTCGCGCTTCTTGGT+AGG - tig0025789:50303-50322 Msa1424780:three_prime_UTR 50.0%
CTTCTTCGCGCTTCTTGGTA+GGG - tig0025789:50304-50323 Msa1424780:three_prime_UTR 50.0%
GGTGATCCATTGGATCACCA+AGG + tig0025789:50890-50909 None:intergenic 50.0%
TTAGAGCTGCAGGGATGGAT+AGG - tig0025789:51015-51034 Msa1424780:intron 50.0%
CTCTAAGCTGACTAAGGCTG+AGG + tig0025789:51193-51212 None:intergenic 50.0%
CAGCCTTAGTCAGCTTAGAG+AGG - tig0025789:51193-51212 Msa1424780:intron 50.0%
GAGGTGAAAGAGGAGCCTTA+TGG - tig0025789:51245-51264 Msa1424780:CDS 50.0%
! GAGGTGAAAGAGGAGTATGC+TGG - tig0025789:51278-51297 Msa1424780:CDS 50.0%
AGGATAGATGGTCAAGCGAG+AGG - tig0025789:51345-51364 Msa1424780:CDS 50.0%
AGTCGGCTGAACAAAGCATG+TGG - tig0025789:51474-51493 Msa1424780:CDS 50.0%
GTCGGCTGAACAAAGCATGT+GGG - tig0025789:51475-51494 Msa1424780:CDS 50.0%
ATTGACCGTAAAGTGGCACC+TGG - tig0025789:51614-51633 Msa1424780:intron 50.0%
CGTCAGGGTTGAACCATCTT+CGG + tig0025789:51655-51674 None:intergenic 50.0%
CGAAGATGGTTCAACCCTGA+CGG - tig0025789:51653-51672 Msa1424780:CDS 50.0%
GGATACCACCATCCACTGTT+AGG - tig0025789:51750-51769 Msa1424780:intron 50.0%
! CCGTCATCCTGAGTATTGTC+TGG + tig0025789:52432-52451 None:intergenic 50.0%
!! AGGATGACGGATTGGCAACT+TGG - tig0025789:52442-52461 Msa1424780:CDS 50.0%
!! GACGGATTGGCAACTTGGAT+AGG - tig0025789:52447-52466 Msa1424780:CDS 50.0%
CTGAATTGGCATGCCTGAGT+AGG + tig0025789:52520-52539 None:intergenic 50.0%
TGCGTGCATGTTTGAGGGTT+TGG + tig0025789:52603-52622 None:intergenic 50.0%
GAGATGTGCGTGCATGTTTG+AGG + tig0025789:52609-52628 None:intergenic 50.0%
AACATGCACGCACATCTCCT+TGG - tig0025789:52611-52630 Msa1424780:CDS 50.0%
GCTGATACCCACAATGCAAG+AGG - tig0025789:52716-52735 Msa1424780:CDS 50.0%
AAAGATGGAGCAGCAGCTGT+TGG - tig0025789:52931-52950 Msa1424780:intron 50.0%
GGTCTTTAGGTAGGCTTTGC+CGG - tig0025789:53306-53325 Msa1424780:intron 50.0%
!! TAGTTTAATGGTGGCGGGTG+GGG - tig0025789:53492-53511 Msa1424780:five_prime_UTR 50.0%
GTGGGGTTATGTGTCGCATA+TGG - tig0025789:53509-53528 Msa1424780:five_prime_UTR 50.0%
AGCTGCAGGGATGGATAGGT+GGG - tig0025789:51019-51038 Msa1424780:intron 55.0%
! GTGGGGTGTTCATCGTCAAC+AGG - tig0025789:51037-51056 Msa1424780:CDS 55.0%
GGCTGAACAAAGCATGTGGG+AGG - tig0025789:51478-51497 Msa1424780:CDS 55.0%
!! AAGCATGTGGGAGGTGCTGA+AGG - tig0025789:51487-51506 Msa1424780:CDS 55.0%
CGGGCAGCTGATCTTAGTAC+AGG + tig0025789:51548-51567 None:intergenic 55.0%
ACCGTAAAGTGGCACCTGGA+GGG - tig0025789:51618-51637 Msa1424780:intron 55.0%
!! TCCCTCCAGGTGCCACTTTA+CGG + tig0025789:51622-51641 None:intergenic 55.0%
! GGACTGATCGGTTCCGAAGA+TGG - tig0025789:51639-51658 Msa1424780:CDS 55.0%
TTGGTTGGAGAGGGCTGACT+TGG - tig0025789:51688-51707 Msa1424780:CDS 55.0%
!! CTGGGGTTGATGACCCCTAT+TGG - tig0025789:51729-51748 Msa1424780:intron 55.0%
ATGGCCCTAACAGTGGATGG+TGG + tig0025789:51758-51777 None:intergenic 55.0%
ATGCACGCACATCTCCTTGG+AGG - tig0025789:52614-52633 Msa1424780:CDS 55.0%
TGCAGCTCAACAAGCAGGTG+AGG + tig0025789:53160-53179 None:intergenic 55.0%
GCCGACAACACAGTGCGAGT+TGG + tig0025789:50266-50285 None:intergenic 60.0%
GAGCTGCAGGGATGGATAGG+TGG - tig0025789:51018-51037 Msa1424780:intron 60.0%
GCTGCAGGGATGGATAGGTG+GGG - tig0025789:51020-51039 Msa1424780:intron 60.0%
!! TGGGAGGTGCTGAAGGCAGA+GGG - tig0025789:51494-51513 Msa1424780:CDS 60.0%
GACCGTAAAGTGGCACCTGG+AGG - tig0025789:51617-51636 Msa1424780:intron 60.0%
TGGCACCTGGAGGGACTGAT+CGG - tig0025789:51627-51646 Msa1424780:CDS 60.0%
! TGACTTGGATGACGTCCGCG+AGG - tig0025789:51703-51722 Msa1424780:intron 60.0%
CGGATGGCCCTAACAGTGGA+TGG + tig0025789:51761-51780 None:intergenic 60.0%
! ATCCTGACAAGGGGCACGGA+TGG + tig0025789:51777-51796 None:intergenic 60.0%
CAGCATCCTGACAAGGGGCA+CGG + tig0025789:51781-51800 None:intergenic 60.0%
GCAGGAGCTCATTGCCCAGA+AGG - tig0025789:51943-51962 Msa1424780:CDS 60.0%
CACGCACATCTCCTTGGAGG+TGG - tig0025789:52617-52636 Msa1424780:CDS 60.0%
!! GTGGGAGGTGCTGAAGGCAG+AGG - tig0025789:51493-51512 Msa1424780:CDS 65.0%
!! GGGAGGTGCTGAAGGCAGAG+GGG - tig0025789:51495-51514 Msa1424780:intron 65.0%
!! GGAGGTGCTGAAGGCAGAGG+GGG - tig0025789:51496-51515 Msa1424780:intron 65.0%
CGGAACCGATCAGTCCCTCC+AGG + tig0025789:51635-51654 None:intergenic 65.0%
CTTGGATGACGTCCGCGAGG+AGG - tig0025789:51706-51725 Msa1424780:intron 65.0%
ATGACGTCCGCGAGGAGGCT+GGG - tig0025789:51711-51730 Msa1424780:intron 65.0%
CATCAACCCCAGCCTCCTCG+CGG + tig0025789:51721-51740 None:intergenic 65.0%
GGCACGGATGGCCCTAACAG+TGG + tig0025789:51765-51784 None:intergenic 65.0%
GATGACGTCCGCGAGGAGGC+TGG - tig0025789:51710-51729 Msa1424780:intron 70.0%
TGACGTCCGCGAGGAGGCTG+GGG - tig0025789:51712-51731 Msa1424780:intron 70.0%
GGCCATCCGTGCCCCTTGTC+AGG - tig0025789:51772-51791 Msa1424780:intron 70.0%
Chromosome Type Strat End Strand Name
tig0025789 gene 50084 53705 50084 ID=Msa1424780;Name=Msa1424780
tig0025789 mRNA 50084 53705 50084 ID=Msa1424780-mRNA-1;Parent=Msa1424780;Name=Msa1424780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=302|0.85|0.87|1|0.85|0.75|8|685|446
tig0025789 exon 50084 50890 50084 ID=Msa1424780-mRNA-1:exon:3988;Parent=Msa1424780-mRNA-1
tig0025789 exon 51027 51085 51027 ID=Msa1424780-mRNA-1:exon:3987;Parent=Msa1424780-mRNA-1
tig0025789 exon 51218 51513 51218 ID=Msa1424780-mRNA-1:exon:3986;Parent=Msa1424780-mRNA-1
tig0025789 exon 51626 51709 51626 ID=Msa1424780-mRNA-1:exon:3985;Parent=Msa1424780-mRNA-1
tig0025789 exon 51795 51852 51795 ID=Msa1424780-mRNA-1:exon:3984;Parent=Msa1424780-mRNA-1
tig0025789 exon 51937 52320 51937 ID=Msa1424780-mRNA-1:exon:3983;Parent=Msa1424780-mRNA-1
tig0025789 exon 52423 52825 52423 ID=Msa1424780-mRNA-1:exon:3982;Parent=Msa1424780-mRNA-1
tig0025789 exon 53469 53705 53469 ID=Msa1424780-mRNA-1:exon:3981;Parent=Msa1424780-mRNA-1
tig0025789 five_prime_UTR 53469 53705 53469 ID=Msa1424780-mRNA-1:five_prime_utr;Parent=Msa1424780-mRNA-1
tig0025789 five_prime_UTR 52761 52825 52761 ID=Msa1424780-mRNA-1:five_prime_utr;Parent=Msa1424780-mRNA-1
tig0025789 CDS 52423 52760 52423 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 51937 52320 51937 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 51795 51852 51795 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 51626 51709 51626 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 51218 51513 51218 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 51027 51085 51027 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 CDS 50769 50890 50769 ID=Msa1424780-mRNA-1:cds;Parent=Msa1424780-mRNA-1
tig0025789 three_prime_UTR 50084 50768 50084 ID=Msa1424780-mRNA-1:three_prime_utr;Parent=Msa1424780-mRNA-1
Gene Sequence

>Msa1424780

ATGGATAGGTGGGGTGTTCATCGTCAACAGGCATTCATTGGTTGGCGTGCAAGTTCTTTTCCTTCTGTTACTAGGAAGGAAGAGGACTCGGACAACGACAGAGAAGAAGTAAATGTTAAGAATGAACCAATATATTTTCCAGATAGTAAGAAAAGGAAGCGCCTCAGCCTTAGTCAGCTTAGAGAGGTGAAAGTAGAGTCTTGTGAGAAGCTTAGAGAGGTGAAAGAGGAGCCTTATGGTCAGCTTATTGAGGTGAAAGAGGAGTATGCTGGGAATCAAAGCAGTAGCAAGAATAAGAGAAAGAAGCATGACAGTAAGGATAGATGGTCAAGCGAGAGGTACAAGTCGGCTGAACAAAGCATGTGGGAGGTGCTGAAGGCAGAGGGGGCGACTTTTGAACACCCAATAACCCGACCTGTACTAAGATCAGCTGCCCGTAAATACATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCACATTGACCGTAAAGTGGCACCTGGAGGGACTGATCGGTTCCGAAGATGGTTCAACCCTGACGGAATTATGGAGTATTGGTTGGAGAGGGCTGACTTGGATGACGTCCGCGAGGAGGCTGGGGTTGATGACCCCTATTGGATACCACCATCCACTGTTAGGGCCATCCGTGCCCCTTGTCAGGATGCTGATTCTTCTGCTGAATTGAAACTGCTTAAAATAGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCATTGCCCAGAAGGAAAAGAAAACTGAAAGTAACATGATGGAGAAGACTTGCAAGGAACTTATGAAGTGGAAAGCTAAAACTGACAACCGCCTAACTGAAATCATGGATTCTTTGAAGAATTTGCAGGGCAAGTATGGTGAGTTCGCGATATGGAAAACTGAAGTGGAGCAACATCTTATGGATATAACAAATAAATTGAATGCTCTTCAAGCACCAAGAGAGTGCACCACTTTTAGTCCTCCTTCAGAAAAATGGAAAGATTGGTTAGAAAACACTAACCCAGACAATACTCAGGATGACGGATTGGCAACTTGGATAGGGAGTTCAGAACTATTTAATGTTCCACAAGAGTGTTTTCTTGAAGATCCCTACTCAGGCATGCCAATTCAGCCACTCAATGAAGAACTGACTAACAAGAAGAGTCATGTTGAGGAGCTGATACCCACAATGCAAGAGGATCAACCTAATGTCACCCTTTCTAGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAGATGGAGCAGCAGCTGTTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAGACATCTCTTTGAGGTATCAGGCCTAG

Protein sequence

>Msa1424780

MDRWGVHRQQAFIGWRASSFPSVTRKEEDSDNDREEVNVKNEPIYFPDSKKRKRLSLSQLREVKVESCEKLREVKEEPYGQLIEVKEEYAGNQSSSKNKRKKHDSKDRWSSERYKSAEQSMWEVLKAEGATFEHPITRPVLRSAARKYIGDTGLLDHLLKHIDRKVAPGGTDRFRRWFNPDGIMEYWLERADLDDVREEAGVDDPYWIPPSTVRAIRAPCQDADSSAELKLLKIEMAQMKKDMQELIAQKEKKTESNMMEKTCKELMKWKAKTDNRLTEIMDSLKNLQGKYGEFAIWKTEVEQHLMDITNKLNALQAPRECTTFSPPSEKWKDWLENTNPDNTQDDGLATWIGSSELFNVPQECFLEDPYSGMPIQPLNEELTNKKSHVEELIPTMQEDQPNVTLSRDVYGFIQMERKDGAAAVGCIKHCIWHASNEVDISLRYQA*