AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0045340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0045340 MtrunA17_Chr1g0212331 93.505 1047 16 4 1 1002 1 1040 0.0 1993
Msa0045340 MtrunA17_Chr2g0281601 54.975 804 288 13 258 1002 515 1303 0.0 816
Msa0045340 MtrunA17_Chr1g0168031 32.012 681 301 13 364 1000 590 1152 1.46e-100 342
Msa0045340 MtrunA17_Chr7g0255821 30.448 647 317 14 365 1000 296 820 8.48e-90 305
Msa0045340 MtrunA17_Chr4g0024921 29.455 825 404 24 261 1001 204 934 7.30e-89 305
Msa0045340 MtrunA17_Chr2g0320751 30.289 657 322 14 363 1000 476 1015 2.07e-88 305
Msa0045340 MtrunA17_Chr1g0163011 41.985 131 76 0 849 979 588 718 1.05e-25 114
Msa0045340 MtrunA17_Chr7g0257101 44.094 127 71 0 845 971 1206 1332 7.45e-25 112
Msa0045340 MtrunA17_Chr5g0403921 42.029 138 77 2 849 983 524 661 7.47e-24 108
Msa0045340 MtrunA17_Chr5g0428401 26.835 395 209 12 351 703 475 831 2.41e-23 107
Msa0045340 MtrunA17_Chr5g0428401 31.973 147 80 3 830 967 1487 1622 1.77e-15 82.0
Msa0045340 MtrunA17_Chr4g0017211 30.137 292 171 6 740 1000 1693 1982 2.74e-23 107
Msa0045340 MtrunA17_Chr4g0017211 23.511 319 159 7 366 660 1508 1765 2.75e-16 84.7
Msa0045340 MtrunA17_Chr1g0175191 40.476 126 75 0 849 974 1080 1205 3.01e-23 107
Msa0045340 MtrunA17_Chr1g0175191 28.251 223 127 6 460 661 601 811 2.01e-15 81.6
Msa0045340 MtrunA17_Chr4g0052341 37.333 150 87 3 849 996 1078 1222 7.73e-21 99.4
Msa0045340 MtrunA17_Chr4g0052341 26.437 174 116 4 487 660 877 1038 1.32e-12 72.4
Msa0045340 MtrunA17_Chr1g0183681 38.333 120 74 0 849 968 753 872 3.84e-20 97.1
Msa0045340 MtrunA17_Chr1g0183681 24.062 320 185 11 366 665 442 723 2.96e-11 67.8
Msa0045340 MtrunA17_Chr4g0040301 38.095 126 78 0 849 974 398 523 3.42e-19 93.2
Msa0045340 MtrunA17_Chr4g0066741 41.525 118 68 1 849 965 507 624 6.05e-19 92.8
Msa0045340 MtrunA17_Chr4g0066741 27.273 176 116 3 486 661 307 470 9.00e-15 79.3
Msa0045340 MtrunA17_Chr2g0286291 41.525 118 68 1 849 965 510 627 8.37e-19 92.4
Msa0045340 MtrunA17_Chr2g0286291 26.966 178 118 3 484 661 308 473 2.11e-14 78.2
Msa0045340 MtrunA17_Chr8g0348721 39.024 123 71 2 849 970 1331 1450 1.90e-18 91.7
Msa0045340 MtrunA17_Chr3g0095091 39.062 128 75 2 849 975 905 1030 2.42e-18 91.3
Msa0045340 MtrunA17_Chr3g0095091 29.282 181 115 4 482 661 693 861 2.60e-15 81.3
Msa0045340 MtrunA17_Chr8g0384531 36.667 120 76 0 849 968 758 877 3.47e-18 90.5
Msa0045340 MtrunA17_Chr5g0442141 38.281 128 76 2 849 975 951 1076 5.18e-18 90.1
Msa0045340 MtrunA17_Chr5g0442141 22.222 297 170 9 367 661 670 907 1.28e-11 69.3
Msa0045340 MtrunA17_Chr3g0137091 36.719 128 78 2 849 975 629 754 1.35e-17 88.6
Msa0045340 MtrunA17_Chr3g0137091 24.022 179 122 4 483 661 426 590 5.48e-11 67.0
Msa0045340 MtrunA17_Chr1g0205891 35.484 155 96 2 849 1002 704 855 2.38e-17 87.8
Msa0045340 MtrunA17_Chr1g0205891 26.562 192 119 5 484 664 493 673 7.30e-14 76.3
Msa0045340 MtrunA17_Chr5g0394201 34.641 153 96 2 849 1000 690 839 2.90e-17 87.4
Msa0045340 MtrunA17_Chr5g0394201 26.882 186 115 4 484 659 480 654 1.47e-13 75.5
Msa0045340 MtrunA17_Chr4g0066651 38.710 124 75 1 849 971 1326 1449 3.61e-17 87.4
Msa0045340 MtrunA17_Chr7g0248031 37.398 123 73 2 849 970 1339 1458 6.64e-17 86.7
Msa0045340 MtrunA17_Chr7g0232121 32.877 146 86 1 849 982 383 528 7.04e-17 85.9
Msa0045340 MtrunA17_Chr7g0232121 27.536 207 134 6 484 679 166 367 3.82e-12 70.5
Msa0045340 MtrunA17_Chr7g0231521 32.192 146 87 1 849 982 304 449 1.80e-16 84.7
Msa0045340 MtrunA17_Chr1g0190381 35.211 142 78 2 849 976 206 347 3.41e-16 83.2
Msa0045340 MtrunA17_Chr4g0047081 30.872 149 95 3 849 990 1054 1201 2.36e-14 78.2
Msa0045340 MtrunA17_Chr2g0320781 31.081 148 90 3 833 971 95 239 3.15e-14 73.6
Msa0045340 MtrunA17_Chr3g0086111 38.739 111 68 0 849 959 552 662 3.55e-14 77.4
Msa0045340 MtrunA17_Chr7g0225791 31.690 142 91 2 849 984 1104 1245 5.59e-14 77.0
Msa0045340 MtrunA17_Chr3g0083491 27.632 152 104 3 847 994 1169 1318 8.27e-14 76.3
Msa0045340 MtrunA17_Chr5g0393461 30.769 156 103 3 849 1000 557 711 9.08e-14 75.9
Msa0045340 MtrunA17_Chr4g0069451 35.345 116 75 0 849 964 488 603 1.42e-13 75.1
Msa0045340 MtrunA17_Chr7g0232991 30.000 140 93 2 849 983 479 618 3.84e-13 73.6
Msa0045340 MtrunA17_Chr7g0233001 29.054 148 93 3 849 987 339 483 7.72e-13 72.4
Msa0045340 MtrunA17_Chr7g0233021 29.940 167 106 5 825 984 1029 1191 4.76e-12 70.5
Msa0045340 MtrunA17_Chr2g0296421 33.858 127 78 3 842 963 860 985 2.22e-11 68.2
Msa0045340 MtrunA17_Chr8g0352361 33.333 126 78 3 842 962 711 835 3.05e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0045340 AT1G50410.2 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0045340 AT1G50410.1 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0045340 AT1G50410.3 60.277 939 276 14 120 1002 84 981 0.0 1050
Msa0045340 AT3G20010.1 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0045340 AT3G20010.5 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0045340 AT3G20010.7 52.952 1067 360 22 58 1002 1 1047 0.0 983
Msa0045340 AT3G20010.3 66.379 696 209 8 311 1002 107 781 0.0 909
Msa0045340 AT3G20010.2 66.379 696 209 8 311 1002 82 756 0.0 909
Msa0045340 AT1G50410.4 56.138 839 271 14 120 902 84 881 0.0 849
Msa0045340 AT3G20010.4 48.601 965 354 22 58 900 1 945 0.0 783
Msa0045340 AT3G20010.6 48.601 965 354 22 58 900 1 945 0.0 783
Msa0045340 AT3G20010.8 48.601 965 354 22 58 900 1 945 0.0 783
Msa0045340 AT1G61140.3 52.116 827 307 20 228 1001 329 1119 0.0 744
Msa0045340 AT1G61140.1 52.116 827 307 20 228 1001 487 1277 0.0 743
Msa0045340 AT1G11100.3 52.219 766 317 10 272 1001 374 1126 0.0 728
Msa0045340 AT1G11100.4 52.219 766 317 10 272 1001 517 1269 0.0 727
Msa0045340 AT1G11100.2 52.219 766 317 10 272 1001 516 1268 0.0 727
Msa0045340 AT1G11100.5 49.737 760 301 8 272 1001 374 1082 0.0 687
Msa0045340 AT1G11100.1 49.737 760 301 8 272 1001 517 1225 0.0 687
Msa0045340 AT3G16600.1 45.192 520 198 9 256 759 8 456 7.84e-144 444
Msa0045340 AT3G16600.1 74.227 97 25 0 885 981 493 589 3.31e-36 146
Msa0045340 AT1G61140.2 50.860 523 190 16 228 702 494 997 2.16e-138 441
Msa0045340 AT5G22750.1 31.250 656 315 13 364 1000 490 1028 4.00e-98 333
Msa0045340 AT5G43530.1 32.073 661 306 15 361 1000 738 1276 6.47e-98 337
Msa0045340 AT1G05120.1 31.704 716 335 15 363 1000 192 831 1.04e-91 311
Msa0045340 AT1G05120.2 31.704 716 335 15 363 1000 235 874 3.02e-91 311
Msa0045340 AT5G05130.1 31.341 619 301 12 366 979 360 859 1.51e-79 278
Msa0045340 AT1G02670.4 32.164 342 154 7 358 672 172 462 1.14e-36 146
Msa0045340 AT1G02670.6 47.368 152 79 1 849 1000 512 662 2.30e-36 147
Msa0045340 AT1G02670.6 32.424 330 147 6 358 660 145 425 5.91e-36 146
Msa0045340 AT1G02670.7 47.368 152 79 1 849 1000 516 666 2.80e-36 147
Msa0045340 AT1G02670.7 28.962 366 183 10 358 715 172 468 6.72e-30 127
Msa0045340 AT1G02670.3 47.368 152 79 1 849 1000 539 689 2.89e-36 147
Msa0045340 AT1G02670.3 32.164 342 154 7 358 672 172 462 7.04e-36 146
Msa0045340 AT1G02670.1 47.368 152 79 1 849 1000 527 677 2.97e-36 147
Msa0045340 AT1G02670.1 28.767 365 185 9 358 715 183 479 4.96e-30 127
Msa0045340 AT1G02670.5 32.164 342 154 7 358 672 145 435 4.72e-36 145
Msa0045340 AT1G02670.5 52.475 101 48 0 849 949 512 612 6.15e-27 117
Msa0045340 AT1G02670.2 32.164 342 154 7 358 672 172 462 6.73e-36 145
Msa0045340 AT1G02670.2 52.475 101 48 0 849 949 539 639 6.49e-27 117
Msa0045340 AT2G02090.1 42.857 154 77 2 834 978 582 733 1.31e-27 120
Msa0045340 AT2G40770.2 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0045340 AT2G40770.2 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0045340 AT2G40770.1 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0045340 AT2G40770.1 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0045340 AT2G40770.3 26.899 316 173 8 365 657 501 781 1.27e-26 118
Msa0045340 AT2G40770.3 31.902 163 100 3 849 1000 1451 1613 6.12e-16 84.0
Msa0045340 AT3G57300.1 41.549 142 83 0 845 986 1220 1361 1.66e-25 115
Msa0045340 AT3G57300.4 41.549 142 83 0 845 986 1220 1361 1.66e-25 115
Msa0045340 AT3G57300.2 41.549 142 83 0 845 986 1253 1394 1.68e-25 115
Msa0045340 AT3G54280.1 30.802 237 136 4 790 1000 1750 1984 2.16e-24 111
Msa0045340 AT3G54280.1 24.107 336 168 9 366 675 1509 1783 1.14e-16 86.3
Msa0045340 AT3G54280.2 30.802 237 136 4 790 1000 1781 2015 2.28e-24 111
Msa0045340 AT3G54280.2 24.107 336 168 9 366 675 1540 1814 1.57e-16 85.9
Msa0045340 AT5G66750.1 40.299 134 79 1 849 981 542 675 2.44e-24 110
Msa0045340 AT3G12810.2 41.732 127 74 0 846 972 1086 1212 2.06e-23 108
Msa0045340 AT3G12810.2 28.177 181 110 4 489 661 654 822 2.45e-13 75.5
Msa0045340 AT3G12810.1 41.732 127 74 0 846 972 1090 1216 2.18e-23 108
Msa0045340 AT3G12810.1 28.177 181 110 4 489 661 658 826 2.47e-13 75.5
Msa0045340 AT3G54460.1 20.906 684 399 20 363 996 753 1344 3.07e-23 107
Msa0045340 AT5G63950.1 36.154 130 83 0 849 978 750 879 1.55e-19 95.1
Msa0045340 AT5G63950.2 36.154 130 83 0 849 978 733 862 1.62e-19 95.1
Msa0045340 AT2G44980.1 37.778 135 83 1 849 982 386 520 1.90e-19 94.7
Msa0045340 AT2G44980.1 26.961 204 136 6 484 679 172 370 1.01e-13 76.3
Msa0045340 AT1G03750.1 38.889 126 77 0 849 974 546 671 1.93e-19 94.7
Msa0045340 AT5G44800.1 38.400 125 75 1 849 971 1022 1146 5.44e-19 94.0
Msa0045340 AT5G44800.1 26.554 177 118 4 484 660 818 982 3.62e-11 68.2
Msa0045340 AT2G18760.3 35.833 120 77 0 849 968 804 923 1.62e-18 92.0
Msa0045340 AT2G18760.4 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G18760.1 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G18760.2 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G18760.7 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G18760.5 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G18760.6 35.833 120 77 0 849 968 745 864 1.66e-18 92.0
Msa0045340 AT2G13370.1 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0045340 AT2G13370.1 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0045340 AT2G13370.2 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0045340 AT2G13370.2 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0045340 AT2G13370.3 38.281 128 76 2 849 975 957 1082 1.98e-18 92.0
Msa0045340 AT2G13370.3 26.519 181 120 4 482 661 747 915 5.92e-12 70.9
Msa0045340 AT5G18620.2 39.831 118 70 1 849 965 513 630 2.12e-18 91.7
Msa0045340 AT5G18620.2 25.843 178 120 3 484 661 311 476 6.96e-14 77.0
Msa0045340 AT5G18620.1 39.831 118 70 1 849 965 513 630 2.25e-18 91.7
Msa0045340 AT5G18620.1 25.843 178 120 3 484 661 311 476 7.70e-14 76.6
Msa0045340 AT2G44980.3 35.862 145 82 2 849 982 394 538 3.10e-18 90.9
Msa0045340 AT2G44980.3 26.033 242 156 8 456 679 142 378 3.02e-14 77.8
Msa0045340 AT2G44980.2 35.862 145 82 2 849 982 395 539 3.41e-18 90.9
Msa0045340 AT2G44980.2 26.033 242 156 8 456 679 143 379 3.59e-14 77.8
Msa0045340 AT3G06400.3 39.831 118 70 1 849 965 508 625 3.86e-18 90.9
Msa0045340 AT3G06400.3 27.374 179 118 3 483 661 305 471 3.43e-15 81.3
Msa0045340 AT3G06400.2 39.831 118 70 1 849 965 508 625 3.96e-18 90.9
Msa0045340 AT3G06400.2 27.374 179 118 3 483 661 305 471 3.34e-15 81.3
Msa0045340 AT3G06400.1 39.831 118 70 1 849 965 508 625 4.09e-18 90.5
Msa0045340 AT3G06400.1 27.374 179 118 3 483 661 305 471 3.51e-15 81.3
Msa0045340 AT2G25170.1 36.719 128 78 2 849 975 613 738 7.23e-18 90.1
Msa0045340 AT2G25170.1 25.253 198 132 5 482 679 409 590 1.96e-12 72.4
Msa0045340 AT2G25170.4 36.719 128 78 2 849 975 613 738 7.23e-18 90.1
Msa0045340 AT2G25170.4 25.253 198 132 5 482 679 409 590 1.96e-12 72.4
Msa0045340 AT2G25170.2 36.719 128 78 2 849 975 630 755 8.18e-18 89.7
Msa0045340 AT2G25170.2 25.253 198 132 5 482 679 426 607 2.20e-12 72.0
Msa0045340 AT2G25170.3 36.719 128 78 2 849 975 639 764 9.39e-18 89.7
Msa0045340 AT2G25170.3 25.253 198 132 5 482 679 435 616 2.72e-12 72.0
Msa0045340 AT2G28290.2 38.710 124 75 1 849 971 1091 1214 1.18e-17 89.7
Msa0045340 AT2G28290.3 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0045340 AT2G28290.4 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0045340 AT2G28290.1 38.710 124 75 1 849 971 1091 1214 1.26e-17 89.7
Msa0045340 AT2G28290.6 38.710 124 75 1 849 971 1092 1215 1.27e-17 89.4
Msa0045340 AT2G28290.5 38.710 124 75 1 849 971 1092 1215 1.27e-17 89.4
Msa0045340 AT3G06010.1 35.948 153 94 2 849 1000 731 880 6.97e-17 86.7
Msa0045340 AT3G06010.1 27.957 186 113 4 484 659 520 694 4.91e-15 80.5
Msa0045340 AT2G46020.5 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0045340 AT2G46020.1 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0045340 AT2G46020.6 40.351 114 65 2 849 961 1325 1436 9.37e-17 86.7
Msa0045340 AT2G46020.2 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0045340 AT2G46020.3 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0045340 AT2G46020.4 40.351 114 65 2 849 961 1326 1437 9.61e-17 86.7
Msa0045340 AT5G19310.2 38.583 127 75 2 849 974 449 573 2.17e-16 84.7
Msa0045340 AT5G19310.2 27.354 223 129 6 459 659 201 412 2.93e-14 77.8
Msa0045340 AT1G08600.4 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0045340 AT1G08600.3 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0045340 AT1G08600.2 35.211 142 78 2 849 976 1133 1274 2.45e-16 85.1
Msa0045340 AT3G54460.2 28.477 151 104 2 849 996 898 1047 2.60e-16 84.7
Msa0045340 AT5G19310.1 34.641 153 96 2 849 1000 713 862 2.61e-16 84.7
Msa0045340 AT5G19310.1 26.906 223 130 6 459 659 465 676 4.77e-14 77.4
Msa0045340 AT1G08600.1 35.211 142 78 2 849 976 1112 1253 2.81e-16 84.7
Msa0045340 AT4G31900.3 31.618 136 92 1 849 983 542 677 1.78e-15 82.0
Msa0045340 AT4G31900.3 26.396 197 124 4 483 679 344 519 1.42e-14 79.3
Msa0045340 AT4G31900.1 31.618 136 92 1 849 983 542 677 1.98e-15 82.0
Msa0045340 AT4G31900.1 26.396 197 124 4 483 679 344 519 1.62e-14 79.0
Msa0045340 AT4G31900.2 31.618 136 92 1 849 983 501 636 2.04e-15 82.0
Msa0045340 AT4G31900.2 26.396 197 124 4 483 679 303 478 1.74e-14 79.0
Msa0045340 AT3G24340.1 34.286 140 80 3 849 979 945 1081 8.14e-15 80.1
Msa0045340 AT1G48310.2 32.414 145 98 0 827 971 469 613 1.82e-14 78.6
Msa0045340 AT1G48310.1 32.414 145 98 0 827 971 464 608 1.94e-14 78.2
Msa0045340 AT1G48310.3 32.414 145 98 0 827 971 464 608 2.09e-14 78.2
Msa0045340 AT3G19210.1 32.051 156 101 3 849 1000 553 707 3.09e-14 77.8
Msa0045340 AT3G19210.2 32.051 156 101 3 849 1000 551 705 3.39e-14 77.8
Msa0045340 AT3G19210.3 32.051 156 101 3 849 1000 553 707 3.45e-14 77.8
Msa0045340 AT1G05490.1 33.813 139 84 3 849 980 1217 1354 1.37e-12 72.8
Msa0045340 AT5G07810.1 33.333 114 76 0 849 962 556 669 1.40e-12 72.8

Find 250 sgRNAs with CRISPR-Local

Find 840 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTAGGTGGTTGGGTTTC+TGG 0.027826 1_1:-77253544 Msa0045340:CDS
TGATTCACGTTCTCAATTTA+AGG 0.116064 1_1:-77248576 Msa0045340:intron
CATTTGATGGTTCTATTTCT+AGG 0.130546 1_1:-77253399 Msa0045340:CDS
TGAATAGAATTTCTGGATAT+TGG 0.151101 1_1:+77249547 None:intergenic
AATTCAAGGCTTCAGCTTTA+TGG 0.156810 1_1:+77250289 None:intergenic
GTAACCTTGAATAGAATTTC+TGG 0.162895 1_1:+77249540 None:intergenic
ATGTGATTTAAACTGATTAA+TGG 0.194685 1_1:-77244992 Msa0045340:three_prime_UTR
TAAAGCTGAAGCCTTGAATT+TGG 0.196050 1_1:-77250286 Msa0045340:CDS
CAAACAACCTATTTGCTAAA+TGG 0.208544 1_1:+77253654 None:intergenic
ATTAGTCTCTCATCAGTTTC+AGG 0.221036 1_1:+77252640 None:intergenic
AAGTTATTTAATCTGTTATT+AGG 0.236063 1_1:+77252907 None:intergenic
TTGCAAAAGTAGGTTGGTTT+AGG 0.237456 1_1:-77249771 Msa0045340:CDS
CGCATGTCATGTTATTCTTT+TGG 0.239707 1_1:-77246447 Msa0045340:CDS
GAACTACTCGGTTCAGTAAT+AGG 0.252859 1_1:+77250186 None:intergenic
ATTAGCGAAATGTGTGAAAA+AGG 0.258433 1_1:+77255718 None:intergenic
AGGAAACCTTGGTTTAAATA+TGG 0.268636 1_1:-77246474 Msa0045340:CDS
AGCAAATAGGTTGTTTGTTA+AGG 0.268906 1_1:-77253648 Msa0045340:five_prime_UTR
GAATAGAATTTCTGGATATT+GGG 0.273088 1_1:+77249548 None:intergenic
CCAGAGCTTGCTCCAGCCTT+AGG 0.279556 1_1:-77249699 Msa0045340:CDS
ATGATTTATATAGCTACTTT+AGG 0.279893 1_1:-77249627 Msa0045340:CDS
GAAGACCATGCTGGCGGTTC+TGG 0.285184 1_1:-77245560 Msa0045340:CDS
ATTTCCTCCATTTAGCAAAT+AGG 0.289725 1_1:-77253661 Msa0045340:five_prime_UTR
CTCGGACCAGGTTGATTATT+GGG 0.293648 1_1:+77253090 None:intergenic
AATTTATGAAGCAGCATTAC+AGG 0.294583 1_1:-77252620 Msa0045340:intron
AGTGAATCTGCGTACCGTTC+TGG 0.303097 1_1:-77252682 Msa0045340:CDS
GCCTCCTAAAACAATTAATC+TGG 0.315310 1_1:-77248651 Msa0045340:CDS
CTCCTCGACTAACGGTTGTT+TGG 0.316018 1_1:+77249945 None:intergenic
TTAGGAGGCAAAGTGATTAT+AGG 0.316851 1_1:+77248665 None:intergenic
AAAGGCAATCACAGATAAAA+TGG 0.318808 1_1:-77250332 Msa0045340:intron
TGCAAAAGTAGGTTGGTTTA+GGG 0.319202 1_1:-77249770 Msa0045340:CDS
TGTCTAGGAACTTTGCTTGA+TGG 0.323557 1_1:-77248692 Msa0045340:intron
CTTCCTCCATCTTTGATGCT+TGG 0.327393 1_1:-77252736 Msa0045340:CDS
CACTGCCGAAGAACACTTGC+AGG 0.334877 1_1:+77250111 None:intergenic
GCTCGGACCAGGTTGATTAT+TGG 0.339372 1_1:+77253089 None:intergenic
CAGGTTGGCTCTGCATTTGA+TGG 0.340581 1_1:-77253412 Msa0045340:CDS
CACCATTGGAATTAGAAATT+CGG 0.346379 1_1:+77253031 None:intergenic
AGCTTCCAACTTCTTGTAGA+AGG 0.347975 1_1:+77248598 None:intergenic
AATATGCTAATCGAATTATA+TGG 0.357516 1_1:-77245278 Msa0045340:three_prime_UTR
GCAACTCCTCAAAGTTGCTT+TGG 0.369209 1_1:+77247221 None:intergenic
TCCTCGACTAACGGTTGTTT+GGG 0.372223 1_1:+77249946 None:intergenic
ATAGCTTGATCTTCAGTAGT+TGG 0.372539 1_1:+77246410 None:intergenic
CTAATCGAATTATATGGTTT+AGG 0.374503 1_1:-77245272 Msa0045340:three_prime_UTR
CGAATCAGAATGGTGGGATC+AGG 0.374903 1_1:-77252762 Msa0045340:CDS
GCTGCTTCTGAAAGGAATTC+AGG 0.375573 1_1:-77253259 Msa0045340:intron
ATTGATCGAGCTCATAGAAT+TGG 0.376291 1_1:-77246389 Msa0045340:CDS
TACAGTTGAAGATAGAATAT+TGG 0.382555 1_1:-77246324 Msa0045340:CDS
AAAAGAAGGTGGTGCTTGTC+TGG 0.385925 1_1:-77249673 Msa0045340:CDS
TGCGAGGGACAGAGCTGTTA+AGG 0.386134 1_1:-77246815 Msa0045340:CDS
ATGTGCTCTTGTAGGTGGTT+GGG 0.388007 1_1:-77253551 Msa0045340:CDS
GATCAATCTGTTTAATAGTC+TGG 0.392290 1_1:-77248175 Msa0045340:CDS
AGAATCAAAACGACATAGAT+AGG 0.392397 1_1:+77255827 None:intergenic
AAATATTCAGAGTGCACATC+TGG 0.395770 1_1:-77246955 Msa0045340:CDS
TGTACTCACTGTTCTGTACT+AGG 0.396558 1_1:+77247142 None:intergenic
CTGCAAGTGTTCTTCGGCAG+TGG 0.399264 1_1:-77250110 Msa0045340:CDS
TGATGGTTCTATTTCTAGGT+TGG 0.399857 1_1:-77253395 Msa0045340:CDS
TCATCAATGGTATTCTGAAT+AGG 0.400698 1_1:+77249646 None:intergenic
CAGTGAATCTCTATTGCCTT+CGG 0.400819 1_1:+77247041 None:intergenic
AATACCTGATGTCTCATTAG+AGG 0.401255 1_1:+77250661 None:intergenic
AGATAGAATATTGGCTCTAC+AGG 0.403717 1_1:-77246315 Msa0045340:intron
GTGATCCGTGTCACAGTAAC+AGG 0.411769 1_1:+77246356 None:intergenic
TCAAGGAAATCGGAGTGAAT+AGG 0.412633 1_1:+77255689 None:intergenic
TGAATCAAAATCTTCAATAT+CGG 0.413189 1_1:+77247005 None:intergenic
CCTAAGGCTGGAGCAAGCTC+TGG 0.413231 1_1:+77249699 None:intergenic
AGTGAATCTCTATTGCCTTC+GGG 0.416076 1_1:+77247042 None:intergenic
GGAGTAGGACCTAGCACATC+TGG 0.416344 1_1:-77252841 Msa0045340:CDS
CAAGGAAATCGGAGTGAATA+GGG 0.417364 1_1:+77255690 None:intergenic
AGATTGATCAGCATCTCCTT+TGG 0.419161 1_1:+77248189 None:intergenic
CAGAGCTTGCTCCAGCCTTA+GGG 0.421331 1_1:-77249698 Msa0045340:CDS
GTCAAATACAGGAGACTTGA+TGG 0.424033 1_1:-77246853 Msa0045340:CDS
ATCATCATCATCCAAATTCA+AGG 0.426949 1_1:+77250275 None:intergenic
CAGCATAAGGATCATACTTC+AGG 0.428885 1_1:+77249602 None:intergenic
TCAACAGAATCTTTCCCAAC+AGG 0.429310 1_1:+77248228 None:intergenic
GTAGAAGGCCCGCTCCTCAT+AGG 0.430281 1_1:+77248613 None:intergenic
GATGGTTCTATTTCTAGGTT+GGG 0.431235 1_1:-77253394 Msa0045340:CDS
CTTTCAGAAGCAGCCCATCT+TGG 0.431602 1_1:+77253268 None:intergenic
AAAATGGTGGCATCTGCATT+TGG 0.431781 1_1:-77245584 Msa0045340:CDS
AAAGGTAGGAAGGGATTAGA+TGG 0.436702 1_1:-77249820 Msa0045340:CDS
ATATCCAGAAATTCTATTCA+AGG 0.436994 1_1:-77249544 Msa0045340:CDS
TCGCCAAATTTCACCAGCAC+TGG 0.442207 1_1:+77245076 None:intergenic
TTCATTGTAAAGAACAACTT+GGG 0.444221 1_1:-77247260 Msa0045340:CDS
TGGTAGTATTGATGTGGAAA+AGG 0.445155 1_1:-77250247 Msa0045340:CDS
ACCATTGGAATTAGAAATTC+GGG 0.448176 1_1:+77253032 None:intergenic
GTGCTTCCATTGCTCGGACC+AGG 0.448588 1_1:+77253078 None:intergenic
TGTTCTTTACAATGAACTGC+AGG 0.451989 1_1:+77247267 None:intergenic
AGCAATCTGGCGTCAAATAC+AGG 0.452070 1_1:-77246864 Msa0045340:CDS
CTCAAACGATAAAGAATCAT+AGG 0.453758 1_1:-77249732 Msa0045340:CDS
GCTATATAATGGAAGTAAGA+AGG 0.460022 1_1:-77249848 Msa0045340:CDS
CGCCAAATTTCACCAGCACT+GGG 0.463213 1_1:+77245077 None:intergenic
TTTCTCATAACCGGCACCAT+TGG 0.465345 1_1:+77253017 None:intergenic
AATATAATTCTGATCCTGTT+GGG 0.465695 1_1:-77248242 Msa0045340:CDS
ATCTTTGGAGAGGAAATTGA+AGG 0.466688 1_1:+77255745 None:intergenic
TTCAAAACCTTACACAAAAG+TGG 0.466852 1_1:-77253515 Msa0045340:intron
TATGTGCTCTTGTAGGTGGT+TGG 0.470245 1_1:-77253552 Msa0045340:CDS
AATGATTTATACACAGCATA+AGG 0.470686 1_1:+77249589 None:intergenic
GCTTTAAGCTACCTAGCAGT+TGG 0.471541 1_1:+77245305 None:intergenic
TTGCAGGCATATGCAGCTGC+TGG 0.472343 1_1:-77248348 Msa0045340:intron
ATTTCAGATCAACATTGGTA+TGG 0.472537 1_1:-77245474 Msa0045340:three_prime_UTR
TCTGCCCTGCAAGTGTTCTT+CGG 0.476335 1_1:-77250116 Msa0045340:CDS
GTGGACTAGCATGTTGGACT+TGG 0.476758 1_1:-77246902 Msa0045340:CDS
AAAGAAGCTGATTTACCTGC+TGG 0.477068 1_1:-77250697 Msa0045340:CDS
TTCTAGGTTGGGCAACGAAA+GGG 0.477557 1_1:-77253383 Msa0045340:CDS
TGGAGACTATGTGCTCTTGT+AGG 0.479611 1_1:-77253559 Msa0045340:CDS
GAAGGTTGATTTCTCCTATG+AGG 0.479926 1_1:-77248627 Msa0045340:CDS
TGGGAAAGATTCTGTTGAAA+TGG 0.482246 1_1:-77248223 Msa0045340:CDS
AGAGAGCTTGATGAGAAAGT+TGG 0.483880 1_1:-77250084 Msa0045340:CDS
CTGGGAGGATTCTTCCAAGA+TGG 0.484682 1_1:-77253282 Msa0045340:CDS
TCTGCGTACCGTTCTGGAGC+AGG 0.485246 1_1:-77252676 Msa0045340:CDS
AGTTGTAAATTGAAGACTCC+TGG 0.487683 1_1:-77247078 Msa0045340:CDS
TGACTTGTGCTTCCATTGCT+CGG 0.489521 1_1:+77253072 None:intergenic
TAGTTCGTCGGACGATGAGT+TGG 0.489567 1_1:-77253320 Msa0045340:CDS
CACAGGCCCCAGGTAGGAAA+AGG 0.493320 1_1:-77250161 Msa0045340:CDS
GAATATAATTCTGATCCTGT+TGG 0.494306 1_1:-77248243 Msa0045340:CDS
AGTTGCCTCTGTGACGATCT+TGG 0.495610 1_1:-77247204 Msa0045340:CDS
GAGACATCAATGGAGCAATC+TGG 0.496744 1_1:-77246877 Msa0045340:CDS
TTGGAGGTGATTGTAGATCC+TGG 0.498865 1_1:-77253301 Msa0045340:CDS
TATTGATCATAATGTGGAGC+TGG 0.498904 1_1:-77245130 Msa0045340:three_prime_UTR
GAGGCGGGAATCAAGGAAAT+CGG 0.503952 1_1:+77255679 None:intergenic
TGATTTCTCCTATGAGGAGC+GGG 0.509422 1_1:-77248621 Msa0045340:CDS
TGCAAGTGTTCTTCGGCAGT+GGG 0.509603 1_1:-77250109 Msa0045340:CDS
CACATCTGGAGGACCACTAA+AGG 0.513599 1_1:-77246941 Msa0045340:CDS
TTCTCAGTGGACTAGCATGT+TGG 0.514207 1_1:-77246908 Msa0045340:CDS
AAGGCCAGCTGCTGGTACAC+TGG 0.515179 1_1:-77250142 Msa0045340:CDS
GCCTTTCCAAGCATCAAAGA+TGG 0.516458 1_1:+77252730 None:intergenic
TTCTGGAGCAGGTGATGAAA+GGG 0.516566 1_1:-77252665 Msa0045340:CDS
TCCATCTTTGATGCTTGGAA+AGG 0.517451 1_1:-77252731 Msa0045340:CDS
TCCCGAATTTCTAATTCCAA+TGG 0.518955 1_1:-77253033 Msa0045340:CDS
ATCAACATTGGTATGGATGA+TGG 0.520065 1_1:-77245467 Msa0045340:three_prime_UTR
CAAGCCAATGCTTGATAATG+TGG 0.520836 1_1:-77253602 Msa0045340:exon
ACCTAGCACATCTGGTGAGA+AGG 0.521088 1_1:-77252833 Msa0045340:CDS
TTGTCCACATTATCAAGCAT+TGG 0.521854 1_1:+77253598 None:intergenic
TCACTAAAAGCAGGAAACCT+TGG 0.522451 1_1:-77246485 Msa0045340:CDS
ACAATATTATCGACTCAACT+TGG 0.524986 1_1:-77253579 Msa0045340:CDS
TATATTCTTTAACAAGAAGC+GGG 0.526456 1_1:+77248259 None:intergenic
TATTATGTACAGATTCAAGA+AGG 0.526786 1_1:-77253167 Msa0045340:intron
GCGGGCCTTCTACAAGAAGT+TGG 0.526893 1_1:-77248603 Msa0045340:CDS
TCTTTATAATATTCTCTGCA+TGG 0.528318 1_1:-77245199 Msa0045340:three_prime_UTR
CTTTAAGCTACCTAGCAGTT+GGG 0.529494 1_1:+77245306 None:intergenic
GCGCTCTTGCAAAAGTAGGT+TGG 0.530031 1_1:-77249777 Msa0045340:CDS
ATGCTGGCGGTTCTGGAACT+CGG 0.531077 1_1:-77245553 Msa0045340:CDS
GAGCCAACGATAGATTGTTA+AGG 0.532964 1_1:-77245168 Msa0045340:three_prime_UTR
GGTTTAGGATGATATTACCT+TGG 0.533665 1_1:-77245257 Msa0045340:three_prime_UTR
ATTGTATTTCAGATCAACAT+TGG 0.535278 1_1:-77245479 Msa0045340:three_prime_UTR
GCATACAAGAATCGTCATCA+TGG 0.535825 1_1:-77252862 Msa0045340:CDS
GATGGCTCTTCTTTCGATTG+CGG 0.537917 1_1:-77249802 Msa0045340:CDS
GTACCAGATGATTGAAAAGA+TGG 0.539039 1_1:+77252958 None:intergenic
TTCGTCGGACGATGAGTTGG+AGG 0.539395 1_1:-77253317 Msa0045340:CDS
TCAAATTATTGATCATAATG+TGG 0.539557 1_1:-77245136 Msa0045340:three_prime_UTR
CTATATAATGGAAGTAAGAA+GGG 0.539807 1_1:-77249847 Msa0045340:CDS
ATAATGCTACGTCGTACAAA+AGG 0.541045 1_1:-77249490 Msa0045340:intron
TGGGAGGATTCTTCCAAGAT+GGG 0.542766 1_1:-77253281 Msa0045340:CDS
CAGTAGTTGGATTCCACCAA+AGG 0.544822 1_1:+77246423 None:intergenic
TTTCTAGGTTGGGCAACGAA+AGG 0.544856 1_1:-77253384 Msa0045340:CDS
ATTTCTAATTCCAATGGTGC+CGG 0.545046 1_1:-77253027 Msa0045340:CDS
GGTGGCGCTCTTGCAAAAGT+AGG 0.546852 1_1:-77249781 Msa0045340:CDS
GTTCTGGAGCAGGTGATGAA+AGG 0.546993 1_1:-77252666 Msa0045340:CDS
AAATAGTTATCTAGATTACA+TGG 0.547848 1_1:-77253359 Msa0045340:CDS
CGCATTGATAACAGAAGACA+TGG 0.550770 1_1:+77247325 None:intergenic
TGTACCTCTAATGAGACATC+AGG 0.551258 1_1:-77250665 Msa0045340:intron
ACAACCAGTGTACCAGCAGC+TGG 0.551867 1_1:+77250138 None:intergenic
TGTGGAGTTATGAAGGTGTA+TGG 0.551870 1_1:-77245412 Msa0045340:three_prime_UTR
ACTTCACATTTAGCTTCCGA+TGG 0.553101 1_1:-77245440 Msa0045340:three_prime_UTR
GTAGCTATATAAATCATCAA+TGG 0.553564 1_1:+77249633 None:intergenic
CCTAGCACATCTGGTGAGAA+GGG 0.554518 1_1:-77252832 Msa0045340:CDS
TGGAGGTGATTGTAGATCCT+GGG 0.556404 1_1:-77253300 Msa0045340:CDS
GGACTTGGTCGAGACATCAA+TGG 0.556406 1_1:-77246887 Msa0045340:CDS
TTATATTCTTTAACAAGAAG+CGG 0.557473 1_1:+77248258 None:intergenic
ATGCTGATGTCACTAAAAGC+AGG 0.559813 1_1:-77246494 Msa0045340:CDS
TAAAACAATTAATCTGGAGA+AGG 0.560183 1_1:-77248645 Msa0045340:CDS
GGCTCTGTGTGGAGTTATGA+AGG 0.560486 1_1:-77245419 Msa0045340:three_prime_UTR
GGTAGGAAAAGGCCAGCTGC+TGG 0.562826 1_1:-77250150 Msa0045340:CDS
GTTCATTGTAAAGAACAACT+TGG 0.563332 1_1:-77247261 Msa0045340:CDS
ATGATTGAAAAGATGGTGGA+AGG 0.564345 1_1:+77252965 None:intergenic
CAAGATGGGCTGCTTCTGAA+AGG 0.564924 1_1:-77253267 Msa0045340:CDS
ACACCTTAACAATCTATCGT+TGG 0.565617 1_1:+77245165 None:intergenic
AATCAACCTGGTCCGAGCAA+TGG 0.566425 1_1:-77253084 Msa0045340:CDS
CCAAATTTCACCAGCACTGG+GGG 0.567337 1_1:+77245079 None:intergenic
GTGAATCTCTATTGCCTTCG+GGG 0.568781 1_1:+77247043 None:intergenic
GTACTCACTGTTCTGTACTA+GGG 0.569675 1_1:+77247143 None:intergenic
AGAGTGAAATTGAACCTGAA+AGG 0.570800 1_1:+77255648 None:intergenic
GGCTCTTCTTTCGATTGCGG+TGG 0.571687 1_1:-77249799 Msa0045340:CDS
ATCGAAATAACAGAGTCATC+AGG 0.572260 1_1:+77247354 None:intergenic
GAATCAGAATGGTGGGATCA+GGG 0.574020 1_1:-77252761 Msa0045340:CDS
AAAAGGTTTGATCTTTGGAG+AGG 0.576265 1_1:+77255735 None:intergenic
AGACTATGTGCTCTTGTAGG+TGG 0.578440 1_1:-77253556 Msa0045340:CDS
CTCGTCCTGTTACTGTGACA+CGG 0.583353 1_1:-77246361 Msa0045340:CDS
ATATCATCCTCCTCGACTAA+CGG 0.583591 1_1:+77249937 None:intergenic
GCATTTGGCGAAGACCATGC+TGG 0.584437 1_1:-77245569 Msa0045340:CDS
AAGAATCGTCATCATGGAGT+AGG 0.586195 1_1:-77252856 Msa0045340:CDS
GGTACAGACATTATACCAGC+AGG 0.590038 1_1:+77250682 None:intergenic
GACTCTGTTATTTCGATGTG+TGG 0.590515 1_1:-77247348 Msa0045340:CDS
AAGGAAACTGTAATGCGGCT+CGG 0.590799 1_1:-77253629 Msa0045340:five_prime_UTR
CGGCAACCATATTTAAACCA+AGG 0.591292 1_1:+77246468 None:intergenic
GATCGTTTCACGAATCAGAA+TGG 0.593273 1_1:-77252772 Msa0045340:CDS
TGCCTCTGTGACGATCTTGG+TGG 0.594445 1_1:-77247201 Msa0045340:CDS
GGATTTCAATACTGATCCTG+AGG 0.595725 1_1:-77246794 Msa0045340:intron
CCCTTCTCACCAGATGTGCT+AGG 0.595968 1_1:+77252832 None:intergenic
CGTTTCACGAATCAGAATGG+TGG 0.597491 1_1:-77252769 Msa0045340:CDS
GTTTCACGAATCAGAATGGT+GGG 0.599820 1_1:-77252768 Msa0045340:CDS
ATAACTCCACACAGAGCCAT+CGG 0.600554 1_1:+77245424 None:intergenic
AAAGAATCATAGGACTCAGA+TGG 0.603963 1_1:-77249722 Msa0045340:CDS
AGTAGTTCAACACAGGCCCC+AGG 0.608515 1_1:-77250171 Msa0045340:CDS
TGATTGAAAAGATGGTGGAA+GGG 0.609027 1_1:+77252966 None:intergenic
TTGGATGATGATGATGAGAA+TGG 0.612698 1_1:-77250267 Msa0045340:CDS
TCTACTTCAAAACGCAGTAA+CGG 0.613580 1_1:+77255793 None:intergenic
GCTTCAGCTTTATGGTTGCG+TGG 0.616461 1_1:+77250297 None:intergenic
AATACAGGAGACTTGATGGT+AGG 0.619105 1_1:-77246849 Msa0045340:CDS
GGGGCCTGTGTTGAACTACT+CGG 0.619233 1_1:+77250174 None:intergenic
ATTATGTACAGATTCAAGAA+GGG 0.619950 1_1:-77253166 Msa0045340:intron
GATTCACTAGAACTAGCAAA+CGG 0.621045 1_1:+77252697 None:intergenic
AAAACAAAGAAGTTACTACA+TGG 0.624136 1_1:+77245355 None:intergenic
GAGTTCCAGAACCGCCAGCA+TGG 0.626039 1_1:+77245555 None:intergenic
TATTCAGAGTGCACATCTGG+AGG 0.626253 1_1:-77246952 Msa0045340:CDS
GTGTATATATATTAGTTCGT+CGG 0.627656 1_1:-77253332 Msa0045340:CDS
TTGATTTCTCCTATGAGGAG+CGG 0.628332 1_1:-77248622 Msa0045340:CDS
ACAACCTATTTGCTAAATGG+AGG 0.628425 1_1:+77253657 None:intergenic
TAAAATCAAAGCTGTCCTTG+AGG 0.629967 1_1:-77247112 Msa0045340:CDS
CATCTTGGAAGAATCCTCCC+AGG 0.631366 1_1:+77253283 None:intergenic
GTTCTTTACAATGAACTGCA+GGG 0.633934 1_1:+77247268 None:intergenic
ACTGCCGAAGAACACTTGCA+GGG 0.634815 1_1:+77250112 None:intergenic
TCAATATCGGAATCATCAGA+AGG 0.635062 1_1:+77247018 None:intergenic
TTAGGTGCAAATGACGAAGG+TGG 0.636052 1_1:+77252925 None:intergenic
ACAACATACGCAAGGTCACA+TGG 0.638369 1_1:+77245104 None:intergenic
CCAGATGATTGAAAAGATGG+TGG 0.645944 1_1:+77252961 None:intergenic
TAGGATGACTCTTACTGCGA+GGG 0.647232 1_1:-77246830 Msa0045340:CDS
TCCCAAACAACCGTTAGTCG+AGG 0.649684 1_1:-77249947 Msa0045340:CDS
TGAGAATGGTAGTATTGATG+TGG 0.651173 1_1:-77250253 Msa0045340:CDS
TTTCATCACCTGCTCCAGAA+CGG 0.653042 1_1:+77252668 None:intergenic
GTTAAGCCCAATAATCAACC+TGG 0.653811 1_1:-77253096 Msa0045340:CDS
AGAAGAAAGTACATAAACCA+AGG 0.654744 1_1:+77245240 None:intergenic
CAAAAGAATAACATGACATG+CGG 0.657977 1_1:+77246448 None:intergenic
GAAATAACAGAGTCATCAGG+TGG 0.658456 1_1:+77247357 None:intergenic
GCCAAATTTCACCAGCACTG+GGG 0.659737 1_1:+77245078 None:intergenic
TTTCCAAGCATCAAAGATGG+AGG 0.662100 1_1:+77252733 None:intergenic
TGAATCTCTATTGCCTTCGG+GGG 0.663579 1_1:+77247044 None:intergenic
GCGGGTGATCACAAGCCTGA+CGG 0.667422 1_1:+77248277 None:intergenic
AACTTGACTGCAGAACCTCA+AGG 0.667843 1_1:+77247097 None:intergenic
CAAACAACCGTTAGTCGAGG+AGG 0.667934 1_1:-77249944 Msa0045340:CDS
TTTGGCGAAGACCATGCTGG+CGG 0.671173 1_1:-77245566 Msa0045340:CDS
TAGCTTCCGATGGCTCTGTG+TGG 0.679854 1_1:-77245430 Msa0045340:three_prime_UTR
TCATTGTAAAGAACAACTTG+GGG 0.686210 1_1:-77247259 Msa0045340:CDS
TTATTAGGTGCAAATGACGA+AGG 0.688311 1_1:+77252922 None:intergenic
TTGTTAAGGAAACTGTAATG+CGG 0.688880 1_1:-77253634 Msa0045340:five_prime_UTR
GTAGGATGACTCTTACTGCG+AGG 0.690531 1_1:-77246831 Msa0045340:CDS
TGAACTTGCAAAATATGATG+TGG 0.692648 1_1:-77250004 Msa0045340:CDS
GTTCAACACAGGCCCCAGGT+AGG 0.695205 1_1:-77250167 Msa0045340:CDS
AGGTGATTGTAGATCCTGGG+AGG 0.700899 1_1:-77253297 Msa0045340:CDS
TCTGAAATACAATTGTAACA+AGG 0.700905 1_1:+77245489 None:intergenic
TCACTAGAACTAGCAAACGG+TGG 0.718383 1_1:+77252700 None:intergenic
TGAACCGAGTAGTTCAACAC+AGG 0.722104 1_1:-77250178 Msa0045340:CDS
TACCACCAAGATCGTCACAG+AGG 0.755206 1_1:+77247199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - chr1_1:77249561-77249580 Msa0045340:CDS 0.0%
!!! TATTATTATTATTATTATTT+TGG - chr1_1:77248894-77248913 Msa0045340:intron 0.0%
!! AACAATATTATATTTCTTTA+TGG + chr1_1:77251946-77251965 None:intergenic 10.0%
!! TAAAGAAATATAATATTGTT+TGG - chr1_1:77251946-77251965 Msa0045340:intron 10.0%
!!! TTAAATTATTTTATTTGTCT+AGG - chr1_1:77252081-77252100 Msa0045340:intron 10.0%
!!! TTTTCGTTTATAAATTTAAA+AGG + chr1_1:77254858-77254877 None:intergenic 10.0%
!! ATTATAGACATTAAAAAATC+TGG + chr1_1:77246952-77246971 None:intergenic 15.0%
!!! TAAATTTTAACGTTCAAAAA+GGG - chr1_1:77247092-77247111 Msa0045340:CDS 15.0%
!! TTATAAAGAAATTTCATTAC+AGG + chr1_1:77247578-77247597 None:intergenic 15.0%
!! AAGTTATTTAATCTGTTATT+AGG + chr1_1:77247884-77247903 None:intergenic 15.0%
!! TTCAAGCTTAATAAAAAAAA+AGG + chr1_1:77248551-77248570 None:intergenic 15.0%
!!! AAACAATTTTAATAACTGAT+GGG + chr1_1:77248610-77248629 None:intergenic 15.0%
!!! AAAACAATTTTAATAACTGA+TGG + chr1_1:77248611-77248630 None:intergenic 15.0%
!!! ATTAAAATTGTTTTTATCAG+AGG - chr1_1:77248617-77248636 Msa0045340:CDS 15.0%
!!! AAATATTGTTTTTTTTTAGC+AGG - chr1_1:77248679-77248698 Msa0045340:CDS 15.0%
!!! AATATTGTTTTTTTTTAGCA+GGG - chr1_1:77248680-77248699 Msa0045340:CDS 15.0%
!!! CTACAATTACTATTTTAAAT+GGG + chr1_1:77249258-77249277 None:intergenic 15.0%
!!! TCTACAATTACTATTTTAAA+TGG + chr1_1:77249259-77249278 None:intergenic 15.0%
!!! TCATTTATTAAGTTTTTTTG+TGG + chr1_1:77249330-77249349 None:intergenic 15.0%
!!! TTTTTTCTTTTTTCATAATC+TGG - chr1_1:77251324-77251343 Msa0045340:intron 15.0%
!!! TAGAAATTTGTTTTGATATT+GGG - chr1_1:77252318-77252337 Msa0045340:intron 15.0%
!! TGATATGATAATTTCATTAT+TGG - chr1_1:77252680-77252699 Msa0045340:CDS 15.0%
!!! TAGTTATAGGATATATTTTA+GGG - chr1_1:77253089-77253108 Msa0045340:CDS 15.0%
!!! TAATAATTGTTGTTTGAAAA+AGG - chr1_1:77253178-77253197 Msa0045340:intron 15.0%
!!! AGTTTAATTTTTATTTCATG+TGG - chr1_1:77254509-77254528 Msa0045340:intron 15.0%
!! CTTGAACAATATTAAAATCA+GGG + chr1_1:77245338-77245357 None:intergenic 20.0%
!! ACTTGAACAATATTAAAATC+AGG + chr1_1:77245339-77245358 None:intergenic 20.0%
!! AGATTTAATTGTAGAAAAGA+TGG - chr1_1:77245921-77245940 Msa0045340:intron 20.0%
!! ATAAATGATTTGATTATGTG+TGG - chr1_1:77245956-77245975 Msa0045340:intron 20.0%
!!! TTATGAAATTATTTTCCATG+TGG + chr1_1:77246121-77246140 None:intergenic 20.0%
!! ATGGAAAATAATTTCATAAG+AGG - chr1_1:77246122-77246141 Msa0045340:intron 20.0%
!!! ATTTCTTTAATTTGTGTACA+AGG + chr1_1:77246713-77246732 None:intergenic 20.0%
!! ATAATATTGCAATTCATGTT+AGG - chr1_1:77246763-77246782 Msa0045340:intron 20.0%
!! ATTTCAATTATATTCACCTT+GGG - chr1_1:77246816-77246835 Msa0045340:CDS 20.0%
!! ACAACCAATATAAAGTTAAA+GGG + chr1_1:77246896-77246915 None:intergenic 20.0%
!! TACAACCAATATAAAGTTAA+AGG + chr1_1:77246897-77246916 None:intergenic 20.0%
!!! TTATATTGGTTGTATTTCTA+TGG - chr1_1:77246903-77246922 Msa0045340:CDS 20.0%
!!! GTAAATTTTAACGTTCAAAA+AGG - chr1_1:77247091-77247110 Msa0045340:CDS 20.0%
!!! AAATTTTAACGTTCAAAAAG+GGG - chr1_1:77247093-77247112 Msa0045340:CDS 20.0%
!! AAATAGTTATCTAGATTACA+TGG - chr1_1:77247429-77247448 Msa0045340:intron 20.0%
!! TCAAAAAAAGAGATTTGAAA+TGG + chr1_1:77248295-77248314 None:intergenic 20.0%
!!! TTTTGTTTCTTCTTAGTTTT+TGG - chr1_1:77248489-77248508 Msa0045340:intron 20.0%
!!! AAAAACAATATTTTCTGACA+TGG + chr1_1:77248672-77248691 None:intergenic 20.0%
!!! TCATTTTGACTGTAAAAAAA+AGG - chr1_1:77249769-77249788 Msa0045340:CDS 20.0%
!!! TTTCTGTTTTGATTTTTCAT+GGG - chr1_1:77250738-77250757 Msa0045340:intron 20.0%
!!! ATGATTTATATAGCTACTTT+AGG - chr1_1:77251161-77251180 Msa0045340:intron 20.0%
!! AAACTTATCAAAATTATGGA+AGG + chr1_1:77251651-77251670 None:intergenic 20.0%
!! AGCTAAACTTATCAAAATTA+TGG + chr1_1:77251655-77251674 None:intergenic 20.0%
!! ATTAACACCAAATAAATACT+TGG + chr1_1:77251702-77251721 None:intergenic 20.0%
!!! ATTTTCTTGTTTTTGAATGA+TGG - chr1_1:77251828-77251847 Msa0045340:intron 20.0%
!! ATTCGTTAAAAAAGAAATCA+AGG + chr1_1:77251882-77251901 None:intergenic 20.0%
!!! TTTCTTTTTTAACGAATCTA+TGG - chr1_1:77251885-77251904 Msa0045340:intron 20.0%
!! AAATTCATTATTATACACGA+TGG + chr1_1:77251911-77251930 None:intergenic 20.0%
!! ATCGTGTATAATAATGAATT+TGG - chr1_1:77251910-77251929 Msa0045340:intron 20.0%
!! TCGTGTATAATAATGAATTT+GGG - chr1_1:77251911-77251930 Msa0045340:intron 20.0%
!! GTTAAGATAAGCAATATAAA+AGG + chr1_1:77252245-77252264 None:intergenic 20.0%
!! TTATATTGCTTATCTTAACT+TGG - chr1_1:77252246-77252265 Msa0045340:intron 20.0%
!!! CTAGAAATTTGTTTTGATAT+TGG - chr1_1:77252317-77252336 Msa0045340:intron 20.0%
!! TTATATTCTTTAACAAGAAG+CGG + chr1_1:77252533-77252552 None:intergenic 20.0%
!!! GTAGTTATAGGATATATTTT+AGG - chr1_1:77253088-77253107 Msa0045340:CDS 20.0%
!!! AGTTATAGGATATATTTTAG+GGG - chr1_1:77253090-77253109 Msa0045340:CDS 20.0%
!! ATCAACAAATTGATAAATCA+GGG + chr1_1:77253261-77253280 None:intergenic 20.0%
!! AATCAACAAATTGATAAATC+AGG + chr1_1:77253262-77253281 None:intergenic 20.0%
!! TGAATCAAAATCTTCAATAT+CGG + chr1_1:77253786-77253805 None:intergenic 20.0%
!! ATTAAACTAATACCAGAAAT+TGG - chr1_1:77254188-77254207 Msa0045340:intron 20.0%
!! AATATGCTAATCGAATTATA+TGG - chr1_1:77255510-77255529 Msa0045340:intron 20.0%
!! TCAAATTATTGATCATAATG+TGG - chr1_1:77255652-77255671 Msa0045340:intron 20.0%
!!! AATGTTTTATAGAAACCTAT+GGG + chr1_1:77255769-77255788 None:intergenic 20.0%
!! ATGTGATTTAAACTGATTAA+TGG - chr1_1:77255796-77255815 Msa0045340:five_prime_UTR 20.0%
!! CATTTGTTAAACTGTTACAT+GGG - chr1_1:77245231-77245250 Msa0045340:three_prime_UTR 25.0%
! AAAATCATACTTAGACTGAT+AGG + chr1_1:77245483-77245502 None:intergenic 25.0%
!!! AACCAAGACTTTTTTTAACA+AGG + chr1_1:77246059-77246078 None:intergenic 25.0%
!! ATAAAGTTGCCAATTTTACA+AGG + chr1_1:77246215-77246234 None:intergenic 25.0%
!!! GAAACTATTTTGTTTGGAAT+TGG + chr1_1:77246260-77246279 None:intergenic 25.0%
! AGTTTCAGAGAAATGAAAAT+CGG - chr1_1:77246607-77246626 Msa0045340:intron 25.0%
! AATATTATAAATCCTACCCA+TGG + chr1_1:77246751-77246770 None:intergenic 25.0%
! TTGAAATCTTACTCAGAATT+GGG + chr1_1:77246803-77246822 None:intergenic 25.0%
! ATTGAAATCTTACTCAGAAT+TGG + chr1_1:77246804-77246823 None:intergenic 25.0%
! GATTTCAATTATATTCACCT+TGG - chr1_1:77246815-77246834 Msa0045340:CDS 25.0%
!! ATGTCCCTTTAACTTTATAT+TGG - chr1_1:77246889-77246908 Msa0045340:CDS 25.0%
!! ATGTCTATAATGAATCCTTT+TGG - chr1_1:77246961-77246980 Msa0045340:CDS 25.0%
!!! AATTTTAACGTTCAAAAAGG+GGG - chr1_1:77247094-77247113 Msa0045340:CDS 25.0%
! GTGTATATATATTAGTTCGT+CGG - chr1_1:77247456-77247475 Msa0045340:intron 25.0%
! TATTATGTACAGATTCAAGA+AGG - chr1_1:77247621-77247640 Msa0045340:intron 25.0%
! ATTATGTACAGATTCAAGAA+GGG - chr1_1:77247622-77247641 Msa0045340:intron 25.0%
! TTTGAGTAAGCATGTAAATA+CGG + chr1_1:77248213-77248232 None:intergenic 25.0%
! GAAAGAATATTCTGTTTGTT+AGG - chr1_1:77248240-77248259 Msa0045340:CDS 25.0%
!!! TTCAAATCTCTTTTTTTGAG+AGG - chr1_1:77248296-77248315 Msa0045340:CDS 25.0%
! GCATATATGATTCACAATTA+AGG + chr1_1:77248354-77248373 None:intergenic 25.0%
! TGTTAATACTGAAACCATAA+GGG - chr1_1:77249100-77249119 Msa0045340:intron 25.0%
!! TTTTGTATTTTCAATCCTAG+AGG + chr1_1:77249219-77249238 None:intergenic 25.0%
! TTATTATCATCGAGAGTTAT+TGG - chr1_1:77250016-77250035 Msa0045340:CDS 25.0%
! TATTATCATCGAGAGTTATT+GGG - chr1_1:77250017-77250036 Msa0045340:CDS 25.0%
! TTTATAACCTTGTTCAAACA+GGG - chr1_1:77250392-77250411 Msa0045340:intron 25.0%
!!! CTTTCTGTTTTGATTTTTCA+TGG - chr1_1:77250737-77250756 Msa0045340:intron 25.0%
!!! TTCTGTTTTGATTTTTCATG+GGG - chr1_1:77250739-77250758 Msa0045340:intron 25.0%
! GATGATATTGATGAAAAAGA+CGG - chr1_1:77250866-77250885 Msa0045340:intron 25.0%
! ATGATATTGATGAAAAAGAC+GGG - chr1_1:77250867-77250886 Msa0045340:intron 25.0%
!! CTTTTTATTGCCAGAAAAAT+CGG + chr1_1:77250912-77250931 None:intergenic 25.0%
!!! ATTTTTCTGGCAATAAAAAG+AGG - chr1_1:77250912-77250931 Msa0045340:intron 25.0%
! AAGAGGAAAAAGCTATATAA+TGG - chr1_1:77250929-77250948 Msa0045340:intron 25.0%
!! CTATATAATGGAAGTAAGAA+GGG - chr1_1:77250941-77250960 Msa0045340:intron 25.0%
! GTAGCTATATAAATCATCAA+TGG + chr1_1:77251158-77251177 None:intergenic 25.0%
! AATGATTTATACACAGCATA+AGG + chr1_1:77251202-77251221 None:intergenic 25.0%
!! GAATAGAATTTCTGGATATT+GGG + chr1_1:77251243-77251262 None:intergenic 25.0%
!! TGAATAGAATTTCTGGATAT+TGG + chr1_1:77251244-77251263 None:intergenic 25.0%
! ATATCCAGAAATTCTATTCA+AGG - chr1_1:77251244-77251263 Msa0045340:intron 25.0%
!!! AATTTTGATAAGTTTAGCTG+AGG - chr1_1:77251656-77251675 Msa0045340:intron 25.0%
!!! ATTTTGATAAGTTTAGCTGA+GGG - chr1_1:77251657-77251676 Msa0045340:intron 25.0%
! AATATAATATTGTTTGGCTG+AGG - chr1_1:77251952-77251971 Msa0045340:intron 25.0%
! ATATAATATTGTTTGGCTGA+GGG - chr1_1:77251953-77251972 Msa0045340:intron 25.0%
!! TTCTCCAGATTAATTGTTTT+AGG + chr1_1:77252144-77252163 None:intergenic 25.0%
! TAAAACAATTAATCTGGAGA+AGG - chr1_1:77252143-77252162 Msa0045340:intron 25.0%
!! TTCTAGACACTAATTTTGAA+GGG + chr1_1:77252303-77252322 None:intergenic 25.0%
!! TTTCTAGACACTAATTTTGA+AGG + chr1_1:77252304-77252323 None:intergenic 25.0%
! TCATTTCAGAACTACAAATT+TGG + chr1_1:77252409-77252428 None:intergenic 25.0%
! TATATTCTTTAACAAGAAGC+GGG + chr1_1:77252532-77252551 None:intergenic 25.0%
! AATATAATTCTGATCCTGTT+GGG - chr1_1:77252546-77252565 Msa0045340:intron 25.0%
! TTGTAAGATATGCAATCAAA+AGG + chr1_1:77252751-77252770 None:intergenic 25.0%
! AATAACATAACATGTACCAT+AGG + chr1_1:77252785-77252804 None:intergenic 25.0%
! TTTGTCTAATGAATGATATC+AGG - chr1_1:77252803-77252822 Msa0045340:CDS 25.0%
!! ATAACTACTTTATGATGATG+TGG + chr1_1:77253076-77253095 None:intergenic 25.0%
! CATCATCATAAAGTAGTTAT+AGG - chr1_1:77253076-77253095 Msa0045340:CDS 25.0%
!!! GTTATAGGATATATTTTAGG+GGG - chr1_1:77253091-77253110 Msa0045340:CDS 25.0%
!!! TTATAGGATATATTTTAGGG+GGG - chr1_1:77253092-77253111 Msa0045340:CDS 25.0%
! GTTTATTCAGATGAAGATAA+AGG - chr1_1:77253203-77253222 Msa0045340:intron 25.0%
! ATGAAGATAAAGGATTTCAA+GGG - chr1_1:77253213-77253232 Msa0045340:intron 25.0%
! AAATAAAATTCCAGACATTC+AGG + chr1_1:77253320-77253339 None:intergenic 25.0%
! ATTTATACTATGGTTTCAAC+AGG - chr1_1:77253406-77253425 Msa0045340:CDS 25.0%
! TTCATTGTAAAGAACAACTT+GGG - chr1_1:77253528-77253547 Msa0045340:CDS 25.0%
! GAAAAAATTATAGCCTTTAG+TGG + chr1_1:77253863-77253882 None:intergenic 25.0%
!! TTACAGCTTTAACAATATTG+GGG + chr1_1:77254029-77254048 None:intergenic 25.0%
!! GTTACAGCTTTAACAATATT+GGG + chr1_1:77254030-77254049 None:intergenic 25.0%
!! AGTTACAGCTTTAACAATAT+TGG + chr1_1:77254031-77254050 None:intergenic 25.0%
!! AAAAAGCAGATTTAACTTCT+CGG + chr1_1:77254127-77254146 None:intergenic 25.0%
!! TAAACCTAGATTTTCTTTGT+TGG - chr1_1:77254234-77254253 Msa0045340:intron 25.0%
!! ATCTTCAACTGTATCTTTTA+TGG + chr1_1:77254457-77254476 None:intergenic 25.0%
! TACAGTTGAAGATAGAATAT+TGG - chr1_1:77254464-77254483 Msa0045340:intron 25.0%
! AGCAATGATAGAAAAAGAAA+GGG + chr1_1:77254662-77254681 None:intergenic 25.0%
!!! GTTGAAAGATGACTTTTTTT+TGG - chr1_1:77254886-77254905 Msa0045340:intron 25.0%
!!! TTTTTTTGGCATTCTTTTCA+AGG - chr1_1:77254900-77254919 Msa0045340:intron 25.0%
!!! TTTTTTGGCATTCTTTTCAA+GGG - chr1_1:77254901-77254920 Msa0045340:intron 25.0%
!!! AGTGTTTTTTCTTGCTTTTA+TGG - chr1_1:77255044-77255063 Msa0045340:intron 25.0%
!!! GTGTTTTTTCTTGCTTTTAT+GGG - chr1_1:77255045-77255064 Msa0045340:intron 25.0%
!!! TTCTGATGTTATTTTTGTGT+TGG - chr1_1:77255155-77255174 Msa0045340:intron 25.0%
!!! TGATCTGAAATATCTTTTCA+TGG - chr1_1:77255269-77255288 Msa0045340:intron 25.0%
!! TCTGAAATACAATTGTAACA+AGG + chr1_1:77255302-77255321 None:intergenic 25.0%
! ATTGTATTTCAGATCAACAT+TGG - chr1_1:77255309-77255328 Msa0045340:intron 25.0%
! AAAACAAAGAAGTTACTACA+TGG + chr1_1:77255436-77255455 None:intergenic 25.0%
! CTAATCGAATTATATGGTTT+AGG - chr1_1:77255516-77255535 Msa0045340:intron 25.0%
! TCTTTATAATATTCTCTGCA+TGG - chr1_1:77255589-77255608 Msa0045340:intron 25.0%
!!! TTTTAGAACAATAAACCCAT+AGG - chr1_1:77255751-77255770 Msa0045340:five_prime_UTR 25.0%
!! GAATGTTTTATAGAAACCTA+TGG + chr1_1:77255770-77255789 None:intergenic 25.0%
AGAATCAAAACGACATAGAT+AGG + chr1_1:77244964-77244983 None:intergenic 30.0%
TGTGAAAAAGGTTTGATCTT+TGG + chr1_1:77245061-77245080 None:intergenic 30.0%
ATTAGCGAAATGTGTGAAAA+AGG + chr1_1:77245073-77245092 None:intergenic 30.0%
AACCTGAAAGGAAAAAATTG+AGG + chr1_1:77245131-77245150 None:intergenic 30.0%
! GCATTTGTTAAACTGTTACA+TGG - chr1_1:77245230-77245249 Msa0045340:three_prime_UTR 30.0%
TTGCAAGGATTGATTGATTA+AGG - chr1_1:77245264-77245283 Msa0045340:three_prime_UTR 30.0%
TGCAAGGATTGATTGATTAA+GGG - chr1_1:77245265-77245284 Msa0045340:three_prime_UTR 30.0%
!! TATTGGGTTTGTTTCTATGA+GGG - chr1_1:77245290-77245309 Msa0045340:three_prime_UTR 30.0%
!!! TTTGTTTCTATGAGGGTTTT+TGG - chr1_1:77245297-77245316 Msa0045340:three_prime_UTR 30.0%
ATAGCATACACATTAGGAAA+AGG - chr1_1:77245437-77245456 Msa0045340:three_prime_UTR 30.0%
TAGCATACACATTAGGAAAA+GGG - chr1_1:77245438-77245457 Msa0045340:three_prime_UTR 30.0%
!!! AGACTTTTTTTAACAAGGTC+TGG + chr1_1:77246054-77246073 None:intergenic 30.0%
GACCTTGTTAAAAAAAGTCT+TGG - chr1_1:77246054-77246073 Msa0045340:intron 30.0%
AAATCATCATTGTTTCCACA+TGG - chr1_1:77246103-77246122 Msa0045340:intron 30.0%
! ACATGGGAAACTATTTTGTT+TGG + chr1_1:77246266-77246285 None:intergenic 30.0%
AATAGTTTCCCATGTTGAAT+TGG - chr1_1:77246271-77246290 Msa0045340:intron 30.0%
CAATTTCACCAATTCAACAT+GGG + chr1_1:77246282-77246301 None:intergenic 30.0%
GAGCAAGTTCTGTTTATTTA+AGG - chr1_1:77246435-77246454 Msa0045340:CDS 30.0%
! AAGCAGCATTGAATTGAATT+GGG + chr1_1:77246643-77246662 None:intergenic 30.0%
! AAAGCAGCATTGAATTGAAT+TGG + chr1_1:77246644-77246663 None:intergenic 30.0%
!! TGCTTTTACTTCTTTTTAGC+CGG - chr1_1:77246658-77246677 Msa0045340:intron 30.0%
AATTTGTGTACAAGGAGTTT+GGG + chr1_1:77246705-77246724 None:intergenic 30.0%
! TAATTTGTGTACAAGGAGTT+TGG + chr1_1:77246706-77246725 None:intergenic 30.0%
!! ATCTAGAAAGTATTGTTCCA+TGG - chr1_1:77246731-77246750 Msa0045340:intron 30.0%
!! TCTAGAAAGTATTGTTCCAT+GGG - chr1_1:77246732-77246751 Msa0045340:intron 30.0%
TGAAATCTTACTCAGAATTG+GGG + chr1_1:77246802-77246821 None:intergenic 30.0%
AAAGTTAAAGGGACATAGAA+AGG + chr1_1:77246885-77246904 None:intergenic 30.0%
! TGGTTGTATTTCTATGGAAA+AGG - chr1_1:77246909-77246928 Msa0045340:CDS 30.0%
TGAAGCACATCAAAAGAAAA+CGG + chr1_1:77247032-77247051 None:intergenic 30.0%
! TTCAGGTTATACTCATGATT+TGG - chr1_1:77247048-77247067 Msa0045340:CDS 30.0%
ATTTCCTCCATTTAGCAAAT+AGG - chr1_1:77247127-77247146 Msa0045340:CDS 30.0%
! CAAACAACCTATTTGCTAAA+TGG + chr1_1:77247137-77247156 None:intergenic 30.0%
! AGCAAATAGGTTGTTTGTTA+AGG - chr1_1:77247140-77247159 Msa0045340:CDS 30.0%
TTGTTAAGGAAACTGTAATG+CGG - chr1_1:77247154-77247173 Msa0045340:CDS 30.0%
!! ACAATATTATCGACTCAACT+TGG - chr1_1:77247209-77247228 Msa0045340:CDS 30.0%
TTCAAAACCTTACACAAAAG+TGG - chr1_1:77247273-77247292 Msa0045340:CDS 30.0%
AAACCTTCGCTAAATGAAAA+TGG + chr1_1:77247308-77247327 None:intergenic 30.0%
!! TCATGATACTTTTTGACTAC+AGG - chr1_1:77247357-77247376 Msa0045340:CDS 30.0%
! CATTTGATGGTTCTATTTCT+AGG - chr1_1:77247389-77247408 Msa0045340:intron 30.0%
ACCATTGGAATTAGAAATTC+GGG + chr1_1:77247759-77247778 None:intergenic 30.0%
CACCATTGGAATTAGAAATT+CGG + chr1_1:77247760-77247779 None:intergenic 30.0%
! AGATGACATTTTCTCATAAC+CGG + chr1_1:77247783-77247802 None:intergenic 30.0%
! TTTTCAATCATCTGGTACAA+GGG - chr1_1:77247835-77247854 Msa0045340:intron 30.0%
AATTTATGAAGCAGCATTAC+AGG - chr1_1:77248168-77248187 Msa0045340:CDS 30.0%
!! TTCTGTTTGTTAGGTTTTAG+TGG - chr1_1:77248249-77248268 Msa0045340:CDS 30.0%
!!! AAATCTCTTTTTTTGAGAGG+AGG - chr1_1:77248299-77248318 Msa0045340:CDS 30.0%
TTTAGAAACCTGTGATAGTT+GGG - chr1_1:77248418-77248437 Msa0045340:intron 30.0%
! CCTTCTAAGAAAGAAAAAAG+AGG + chr1_1:77248519-77248538 None:intergenic 30.0%
!!! CCTCTTTTTTCTTTCTTAGA+AGG - chr1_1:77248516-77248535 Msa0045340:intron 30.0%
! AATATTTTCTGACATGGCAA+CGG + chr1_1:77248666-77248685 None:intergenic 30.0%
AGGTTCTCTATTAGTTACTT+CGG - chr1_1:77248741-77248760 Msa0045340:intron 30.0%
TGTTTGTGAACATGTGATTT+AGG - chr1_1:77249069-77249088 Msa0045340:intron 30.0%
GTTTGTGAACATGTGATTTA+GGG - chr1_1:77249070-77249089 Msa0045340:intron 30.0%
TTTGTGAACATGTGATTTAG+GGG - chr1_1:77249071-77249090 Msa0045340:intron 30.0%
CTTATGGTTTCAGTATTAAC+AGG + chr1_1:77249101-77249120 None:intergenic 30.0%
CTGTTAATACTGAAACCATA+AGG - chr1_1:77249099-77249118 Msa0045340:intron 30.0%
AGAATTGTTGTAGTTGAGAT+AGG + chr1_1:77249166-77249185 None:intergenic 30.0%
GTATTATTATCCCATACACT+TGG + chr1_1:77249295-77249314 None:intergenic 30.0%
TTCTGCATCAATATGATATG+TGG - chr1_1:77249395-77249414 Msa0045340:intron 30.0%
CAGTCAAAATGAAGAAGAAA+GGG + chr1_1:77249761-77249780 None:intergenic 30.0%
ACAGTCAAAATGAAGAAGAA+AGG + chr1_1:77249762-77249781 None:intergenic 30.0%
! GGTAAATCAGCTTCTTTTAA+TGG + chr1_1:77250088-77250107 None:intergenic 30.0%
TAAGAGCAGTTATGATAGAT+AGG + chr1_1:77250157-77250176 None:intergenic 30.0%
!!! GTGCAATTTTCTGGAATATA+AGG + chr1_1:77250235-77250254 None:intergenic 30.0%
TATATTCCAGAAAATTGCAC+TGG - chr1_1:77250235-77250254 Msa0045340:CDS 30.0%
CTTTATAACCTTGTTCAAAC+AGG - chr1_1:77250391-77250410 Msa0045340:intron 30.0%
AAAGGCAATCACAGATAAAA+TGG - chr1_1:77250456-77250475 Msa0045340:intron 30.0%
ATCATCATCATCCAAATTCA+AGG + chr1_1:77250516-77250535 None:intergenic 30.0%
! AGTAATAGGTTTTGCATCAT+TGG + chr1_1:77250591-77250610 None:intergenic 30.0%
!!! TCTGTTTTGATTTTTCATGG+GGG - chr1_1:77250740-77250759 Msa0045340:intron 30.0%
! TCATATTTTGCAAGTTCAAC+AGG + chr1_1:77250782-77250801 None:intergenic 30.0%
TGAACTTGCAAAATATGATG+TGG - chr1_1:77250784-77250803 Msa0045340:intron 30.0%
TGATATTGATGAAAAAGACG+GGG - chr1_1:77250868-77250887 Msa0045340:intron 30.0%
! GCTATATAATGGAAGTAAGA+AGG - chr1_1:77250940-77250959 Msa0045340:intron 30.0%
CTCAAACGATAAAGAATCAT+AGG - chr1_1:77251056-77251075 Msa0045340:intron 30.0%
TCATCAATGGTATTCTGAAT+AGG + chr1_1:77251145-77251164 None:intergenic 30.0%
GTAACCTTGAATAGAATTTC+TGG + chr1_1:77251251-77251270 None:intergenic 30.0%
! AAAAACTTCAAGCAGTTTTG+AGG - chr1_1:77251272-77251291 Msa0045340:intron 30.0%
!! AAAACTTCAAGCAGTTTTGA+GGG - chr1_1:77251273-77251292 Msa0045340:intron 30.0%
! GTATGAATTTATCGTTTTCC+TGG - chr1_1:77251372-77251391 Msa0045340:intron 30.0%
GTCATGAACTTTAACTAAAG+AGG + chr1_1:77251442-77251461 None:intergenic 30.0%
CTTATCAAAATTATGGAAGG+TGG + chr1_1:77251648-77251667 None:intergenic 30.0%
AATATGTCTAGCATTCTGAT+GGG + chr1_1:77251757-77251776 None:intergenic 30.0%
AAATATGTCTAGCATTCTGA+TGG + chr1_1:77251758-77251777 None:intergenic 30.0%
!! TTGGTGTCATATTTACTGTA+TGG - chr1_1:77252026-77252045 Msa0045340:intron 30.0%
!! TGGTGTCATATTTACTGTAT+GGG - chr1_1:77252027-77252046 Msa0045340:intron 30.0%
!!! TCCAGATTAATTGTTTTAGG+AGG + chr1_1:77252141-77252160 None:intergenic 30.0%
TGATTCACGTTCTCAATTTA+AGG - chr1_1:77252212-77252231 Msa0045340:intron 30.0%
! ATTGCTTATCTTAACTTGGT+TGG - chr1_1:77252250-77252269 Msa0045340:intron 30.0%
! ATCTGATATTTCTATGCTGA+TGG - chr1_1:77252376-77252395 Msa0045340:intron 30.0%
GAATATAATTCTGATCCTGT+TGG - chr1_1:77252545-77252564 Msa0045340:intron 30.0%
GATCAATCTGTTTAATAGTC+TGG - chr1_1:77252613-77252632 Msa0045340:intron 30.0%
TTCTAAGCATATGTTTACTC+TGG - chr1_1:77252876-77252895 Msa0045340:CDS 30.0%
TCTAAGCATATGTTTACTCT+GGG - chr1_1:77252877-77252896 Msa0045340:CDS 30.0%
!!! CGTCACATTATTAGTCTTTT+TGG - chr1_1:77252913-77252932 Msa0045340:CDS 30.0%
TACACTTTGTTCACAAAATC+AGG - chr1_1:77252947-77252966 Msa0045340:CDS 30.0%
! AAGAAAGTCATGGATTATGA+TGG - chr1_1:77252999-77253018 Msa0045340:CDS 30.0%
ATGGAAACAAGTCAAAGTTA+AGG - chr1_1:77253018-77253037 Msa0045340:CDS 30.0%
GATGAAGATAAAGGATTTCA+AGG - chr1_1:77253212-77253231 Msa0045340:intron 30.0%
TGAAGATAAAGGATTTCAAG+GGG - chr1_1:77253214-77253233 Msa0045340:intron 30.0%
! TAATTTTCTACCTGAATGTC+TGG - chr1_1:77253307-77253326 Msa0045340:CDS 30.0%
TAGCTATGCATTGTCATTAA+GGG - chr1_1:77253374-77253393 Msa0045340:CDS 30.0%
GTTCATTGTAAAGAACAACT+TGG - chr1_1:77253527-77253546 Msa0045340:CDS 30.0%
TCATTGTAAAGAACAACTTG+GGG - chr1_1:77253529-77253548 Msa0045340:CDS 30.0%
!!! AGATTTTGATTCAGATGTCA+AGG - chr1_1:77253793-77253812 Msa0045340:intron 30.0%
!!! AGGCTATAATTTTTTCTCAG+TGG - chr1_1:77253867-77253886 Msa0045340:intron 30.0%
CACAGTAATAATCCAATTTC+TGG + chr1_1:77254203-77254222 None:intergenic 30.0%
AGGAAACCTTGGTTTAAATA+TGG - chr1_1:77254314-77254333 Msa0045340:intron 30.0%
CAAAAGAATAACATGACATG+CGG + chr1_1:77254343-77254362 None:intergenic 30.0%
! ATGTTATTCTTTTGGACCTT+TGG - chr1_1:77254349-77254368 Msa0045340:intron 30.0%
TTATTTCATGTGGCAATATG+AGG - chr1_1:77254519-77254538 Msa0045340:intron 30.0%
CAGCAATGATAGAAAAAGAA+AGG + chr1_1:77254663-77254682 None:intergenic 30.0%
! TCTTTTTCTATCATTGCTGA+CGG - chr1_1:77254664-77254683 Msa0045340:intron 30.0%
AGGAAAGCAATAATGAGAAA+AGG + chr1_1:77254838-77254857 None:intergenic 30.0%
! AAATCCTTAGCCACTTTAAT+TGG - chr1_1:77254977-77254996 Msa0045340:intron 30.0%
CATTGAAATTAAAAGTTCCC+CGG + chr1_1:77255091-77255110 None:intergenic 30.0%
ATTTCAGATCAACATTGGTA+TGG - chr1_1:77255314-77255333 Msa0045340:intron 30.0%
! AGAAGAAAGTACATAAACCA+AGG + chr1_1:77255551-77255570 None:intergenic 30.0%
TCTACTTCAAAACGCAGTAA+CGG + chr1_1:77244998-77245017 None:intergenic 35.0%
! ATCTTTGGAGAGGAAATTGA+AGG + chr1_1:77245046-77245065 None:intergenic 35.0%
! AAAAGGTTTGATCTTTGGAG+AGG + chr1_1:77245056-77245075 None:intergenic 35.0%
TGAAAGGAAAAAATTGAGGC+GGG + chr1_1:77245127-77245146 None:intergenic 35.0%
CTGAAAGGAAAAAATTGAGG+CGG + chr1_1:77245128-77245147 None:intergenic 35.0%
AGAGTGAAATTGAACCTGAA+AGG + chr1_1:77245143-77245162 None:intergenic 35.0%
GCAAGGATTGATTGATTAAG+GGG - chr1_1:77245266-77245285 Msa0045340:three_prime_UTR 35.0%
CAAGGATTGATTGATTAAGG+GGG - chr1_1:77245267-77245286 Msa0045340:three_prime_UTR 35.0%
! TTGATTGATTAAGGGGGTAT+TGG - chr1_1:77245273-77245292 Msa0045340:three_prime_UTR 35.0%
!! TGATTGATTAAGGGGGTATT+GGG - chr1_1:77245274-77245293 Msa0045340:three_prime_UTR 35.0%
!! GTATTGGGTTTGTTTCTATG+AGG - chr1_1:77245289-77245308 Msa0045340:three_prime_UTR 35.0%
!!! ACTAGGGTTTTTGAGTAGAT+TGG - chr1_1:77245399-77245418 Msa0045340:three_prime_UTR 35.0%
!!! CTAGGGTTTTTGAGTAGATT+GGG - chr1_1:77245400-77245419 Msa0045340:three_prime_UTR 35.0%
AGCATACACATTAGGAAAAG+GGG - chr1_1:77245439-77245458 Msa0045340:three_prime_UTR 35.0%
TAGGTGAAACAATTCATGGT+CGG + chr1_1:77245591-77245610 None:intergenic 35.0%
TTCCTAGGTGAAACAATTCA+TGG + chr1_1:77245595-77245614 None:intergenic 35.0%
TAGATAAGCTGTCATAGCAA+AGG - chr1_1:77245699-77245718 Msa0045340:intron 35.0%
TTCATATACTGCGTTTGCAA+TGG - chr1_1:77245744-77245763 Msa0045340:intron 35.0%
!!! TTGTCTCTGGTGGATTTTTT+TGG - chr1_1:77245777-77245796 Msa0045340:intron 35.0%
GTACTAATATCCCATGAATC+CGG - chr1_1:77245799-77245818 Msa0045340:intron 35.0%
TACTAATATCCCATGAATCC+GGG - chr1_1:77245800-77245819 Msa0045340:intron 35.0%
GATTTGATTATGTGTGGAGA+AGG - chr1_1:77245962-77245981 Msa0045340:intron 35.0%
CGCGATTTACCTTGTAAAAT+TGG - chr1_1:77246203-77246222 Msa0045340:intron 35.0%
GCAATTTCACCAATTCAACA+TGG + chr1_1:77246283-77246302 None:intergenic 35.0%
TTGAATTGGTGAAATTGCCT+GGG - chr1_1:77246285-77246304 Msa0045340:intron 35.0%
ACCAAAATTTCGATTTACCC+AGG + chr1_1:77246305-77246324 None:intergenic 35.0%
TGGTGAAATCTTCAATTCGT+TGG - chr1_1:77246321-77246340 Msa0045340:CDS 35.0%
TTGAATGACAAACCCTATTC+AGG - chr1_1:77246385-77246404 Msa0045340:CDS 35.0%
TGAATGACAAACCCTATTCA+GGG - chr1_1:77246386-77246405 Msa0045340:CDS 35.0%
! TAAACAGAACTTGCTCACAA+GGG + chr1_1:77246431-77246450 None:intergenic 35.0%
! ATAAACAGAACTTGCTCACA+AGG + chr1_1:77246432-77246451 None:intergenic 35.0%
! GTTTGTTTGTGATGGTGAAA+AGG - chr1_1:77246515-77246534 Msa0045340:intron 35.0%
!!! AAGGCACTCATTTTTTGAGA+CGG - chr1_1:77246544-77246563 Msa0045340:intron 35.0%
!! TTTTACTTCTTTTTAGCCGG+TGG - chr1_1:77246661-77246680 Msa0045340:intron 35.0%
TAAAATGTTGTTGCTACCCA+AGG + chr1_1:77246835-77246854 None:intergenic 35.0%
! GGGTAGCAACAACATTTTAT+TGG - chr1_1:77246836-77246855 Msa0045340:CDS 35.0%
! GTTTTCTTTTGATGTGCTTC+AGG - chr1_1:77247031-77247050 Msa0045340:CDS 35.0%
! ACAACCTATTTGCTAAATGG+AGG + chr1_1:77247134-77247153 None:intergenic 35.0%
TTGTCCACATTATCAAGCAT+TGG + chr1_1:77247193-77247212 None:intergenic 35.0%
!! TAACTCACCACTTTTGTGTA+AGG + chr1_1:77247283-77247302 None:intergenic 35.0%
! ACACCATTTTCATTTAGCGA+AGG - chr1_1:77247302-77247321 Msa0045340:CDS 35.0%
!! GATACTTTTTGACTACAGGT+TGG - chr1_1:77247361-77247380 Msa0045340:CDS 35.0%
!! TGATGGTTCTATTTCTAGGT+TGG - chr1_1:77247393-77247412 Msa0045340:intron 35.0%
!! GATGGTTCTATTTCTAGGTT+GGG - chr1_1:77247394-77247413 Msa0045340:intron 35.0%
TCCCGAATTTCTAATTCCAA+TGG - chr1_1:77247755-77247774 Msa0045340:intron 35.0%
ATTTCTAATTCCAATGGTGC+CGG - chr1_1:77247761-77247780 Msa0045340:intron 35.0%
! CATCTCAACAAGCTTTTAAC+AGG - chr1_1:77247798-77247817 Msa0045340:intron 35.0%
!! TGATTGAAAAGATGGTGGAA+GGG + chr1_1:77247825-77247844 None:intergenic 35.0%
!! ATGATTGAAAAGATGGTGGA+AGG + chr1_1:77247826-77247845 None:intergenic 35.0%
GTACCAGATGATTGAAAAGA+TGG + chr1_1:77247833-77247852 None:intergenic 35.0%
! CTTTTCAATCATCTGGTACA+AGG - chr1_1:77247834-77247853 Msa0045340:intron 35.0%
TTATTAGGTGCAAATGACGA+AGG + chr1_1:77247869-77247888 None:intergenic 35.0%
!!! GGCTTTTTTCGTGACAATTT+TGG - chr1_1:77247977-77247996 Msa0045340:intron 35.0%
GATTCACTAGAACTAGCAAA+CGG + chr1_1:77248094-77248113 None:intergenic 35.0%
! ATTAGTCTCTCATCAGTTTC+AGG + chr1_1:77248151-77248170 None:intergenic 35.0%
CAACTATCACAGGTTTCTAA+AGG + chr1_1:77248419-77248438 None:intergenic 35.0%
! CTTTAGAAACCTGTGATAGT+TGG - chr1_1:77248417-77248436 Msa0045340:intron 35.0%
ATGTAGTGCATGTGGATATT+TGG - chr1_1:77248451-77248470 Msa0045340:intron 35.0%
TGTAGTGCATGTGGATATTT+GGG - chr1_1:77248452-77248471 Msa0045340:intron 35.0%
GTATCATGTCTAGCATGTAA+AGG + chr1_1:77248576-77248595 None:intergenic 35.0%
TGCATTAATGTCTGTGATAC+AGG - chr1_1:77249023-77249042 Msa0045340:intron 35.0%
!! TTGTGCCATTTGTGTTTCAT+GGG + chr1_1:77249191-77249210 None:intergenic 35.0%
!! TTTGTGCCATTTGTGTTTCA+TGG + chr1_1:77249192-77249211 None:intergenic 35.0%
AATGGCACAAAAATACCTCT+AGG - chr1_1:77249201-77249220 Msa0045340:intron 35.0%
TTGTCACATAGTTGTCAAAG+CGG - chr1_1:77249446-77249465 Msa0045340:intron 35.0%
GATTAGAGATCTAGAGATCT+AGG + chr1_1:77249723-77249742 None:intergenic 35.0%
! AGAACAGAGATGAGATTTTG+TGG - chr1_1:77249803-77249822 Msa0045340:CDS 35.0%
AATACCTGATGTCTCATTAG+AGG + chr1_1:77250130-77250149 None:intergenic 35.0%
! TAATGAGACATCAGGTATTG+CGG - chr1_1:77250131-77250150 Msa0045340:CDS 35.0%
AATTCAAGGCTTCAGCTTTA+TGG + chr1_1:77250502-77250521 None:intergenic 35.0%
TAAAGCTGAAGCCTTGAATT+TGG - chr1_1:77250502-77250521 Msa0045340:intron 35.0%
! TTGGATGATGATGATGAGAA+TGG - chr1_1:77250521-77250540 Msa0045340:intron 35.0%
!! TGAGAATGGTAGTATTGATG+TGG - chr1_1:77250535-77250554 Msa0045340:intron 35.0%
!! TGGTAGTATTGATGTGGAAA+AGG - chr1_1:77250541-77250560 Msa0045340:intron 35.0%
TTTATTGCCAGAAAAATCGG+AGG + chr1_1:77250909-77250928 None:intergenic 35.0%
GGAAGTAAGAAGGGTAAAAA+AGG - chr1_1:77250950-77250969 Msa0045340:intron 35.0%
GTAAGAAGGGTAAAAAAGGT+AGG - chr1_1:77250954-77250973 Msa0045340:intron 35.0%
AAGGGTAAAAAAGGTAGGAA+GGG - chr1_1:77250959-77250978 Msa0045340:intron 35.0%
!! TTGCAAAAGTAGGTTGGTTT+AGG - chr1_1:77251017-77251036 Msa0045340:intron 35.0%
!! TGCAAAAGTAGGTTGGTTTA+GGG - chr1_1:77251018-77251037 Msa0045340:intron 35.0%
AAAGAATCATAGGACTCAGA+TGG - chr1_1:77251066-77251085 Msa0045340:intron 35.0%
! TTTTGTACGACGTAGCATTA+TGG + chr1_1:77251299-77251318 None:intergenic 35.0%
ATAATGCTACGTCGTACAAA+AGG - chr1_1:77251298-77251317 Msa0045340:intron 35.0%
CTTAAAACCTAAATCAAGCC+AGG + chr1_1:77251393-77251412 None:intergenic 35.0%
AGACTTGACATCATTACAAC+TGG + chr1_1:77251567-77251586 None:intergenic 35.0%
GTCGACACCAAGTATTTATT+TGG - chr1_1:77251692-77251711 Msa0045340:intron 35.0%
!!! AGCCTGATTTTCTTTGAAGT+TGG - chr1_1:77252007-77252026 Msa0045340:intron 35.0%
CACCAACTTCAAAGAAAATC+AGG + chr1_1:77252012-77252031 None:intergenic 35.0%
! GGTGTCATATTTACTGTATG+GGG - chr1_1:77252028-77252047 Msa0045340:intron 35.0%
GTGTCATATTTACTGTATGG+GGG - chr1_1:77252029-77252048 Msa0045340:intron 35.0%
TTAGGAGGCAAAGTGATTAT+AGG + chr1_1:77252126-77252145 None:intergenic 35.0%
GCCTCCTAAAACAATTAATC+TGG - chr1_1:77252137-77252156 Msa0045340:intron 35.0%
AATGAATGCTTGTACTTTGC+AGG - chr1_1:77252424-77252443 Msa0045340:intron 35.0%
TGGGAAAGATTCTGTTGAAA+TGG - chr1_1:77252565-77252584 Msa0045340:intron 35.0%
AATGGCAAAAAAGCTTCCAA+AGG - chr1_1:77252583-77252602 Msa0045340:intron 35.0%
! GATCTATACCGGATGTTTTA+AGG + chr1_1:77252729-77252748 None:intergenic 35.0%
GCAATCAAAAGGATCTATAC+CGG + chr1_1:77252740-77252759 None:intergenic 35.0%
TACAAGTCTTACTCTTCCTA+TGG - chr1_1:77252766-77252785 Msa0045340:CDS 35.0%
GTCTAATGAATGATATCAGG+AGG - chr1_1:77252806-77252825 Msa0045340:CDS 35.0%
CCATGACTTTCTTACAATGA+AGG + chr1_1:77252992-77253011 None:intergenic 35.0%
CCTTCATTGTAAGAAAGTCA+TGG - chr1_1:77252989-77253008 Msa0045340:CDS 35.0%
TGTGCTACATAAAATACCCA+TGG + chr1_1:77253125-77253144 None:intergenic 35.0%
GAAGATAAAGGATTTCAAGG+GGG - chr1_1:77253215-77253234 Msa0045340:intron 35.0%
AAGATAAAGGATTTCAAGGG+GGG - chr1_1:77253216-77253235 Msa0045340:intron 35.0%
GTAGCTATGCATTGTCATTA+AGG - chr1_1:77253373-77253392 Msa0045340:CDS 35.0%
ATCGAAATAACAGAGTCATC+AGG + chr1_1:77253437-77253456 None:intergenic 35.0%
GTTCTTTACAATGAACTGCA+GGG + chr1_1:77253523-77253542 None:intergenic 35.0%
TGTTCTTTACAATGAACTGC+AGG + chr1_1:77253524-77253543 None:intergenic 35.0%
! TTTTCTCCAAAGCAACTTTG+AGG - chr1_1:77253561-77253580 Msa0045340:CDS 35.0%
TAAAATCAAAGCTGTCCTTG+AGG - chr1_1:77253676-77253695 Msa0045340:five_prime_UTR 35.0%
AGTTGTAAATTGAAGACTCC+TGG - chr1_1:77253710-77253729 Msa0045340:intron 35.0%
TCAATATCGGAATCATCAGA+AGG + chr1_1:77253773-77253792 None:intergenic 35.0%
AAATATTCAGAGTGCACATC+TGG - chr1_1:77253833-77253852 Msa0045340:intron 35.0%
! AGCTTTAACAATATTGGGGA+TGG + chr1_1:77254025-77254044 None:intergenic 35.0%
GGTTCTTACATCACATTTCT+TGG + chr1_1:77254081-77254100 None:intergenic 35.0%
TACTTCAGCTACTAACAAAC+AGG + chr1_1:77254102-77254121 None:intergenic 35.0%
TCAGCCAACAAAGAAAATCT+AGG + chr1_1:77254241-77254260 None:intergenic 35.0%
! CGCATGTCATGTTATTCTTT+TGG - chr1_1:77254341-77254360 Msa0045340:intron 35.0%
! TTATTCTTTTGGACCTTTGG+TGG - chr1_1:77254352-77254371 Msa0045340:intron 35.0%
ATAGCTTGATCTTCAGTAGT+TGG + chr1_1:77254381-77254400 None:intergenic 35.0%
ATTGATCGAGCTCATAGAAT+TGG - chr1_1:77254399-77254418 Msa0045340:intron 35.0%
!! AGATAGAATATTGGCTCTAC+AGG - chr1_1:77254473-77254492 Msa0045340:intron 35.0%
! ATTTAGAGTCCCCAGTAATT+CGG - chr1_1:77254564-77254583 Msa0045340:intron 35.0%
! ATTGAGGTGATTTGTGAGTT+TGG - chr1_1:77254607-77254626 Msa0045340:intron 35.0%
! CTTTTTCTATCATTGCTGAC+GGG - chr1_1:77254665-77254684 Msa0045340:intron 35.0%
TGGTATTGTCAATCTACTGT+AGG + chr1_1:77254773-77254792 None:intergenic 35.0%
TTTATGAGATCAATGCCCAT+TGG + chr1_1:77254958-77254977 None:intergenic 35.0%
ATAACTCTTCCTGTATCGTT+TGG + chr1_1:77255017-77255036 None:intergenic 35.0%
!!! CGGGGAACTTTTAATTTCAA+TGG - chr1_1:77255089-77255108 Msa0045340:intron 35.0%
! TTTTTCTCTTTTCTTCCTGC+CGG + chr1_1:77255188-77255207 None:intergenic 35.0%
GCAGGAAGAAAAGAGAAAAA+TGG - chr1_1:77255188-77255207 Msa0045340:intron 35.0%
GGAAGAAAAGAGAAAAATGG+TGG - chr1_1:77255191-77255210 Msa0045340:intron 35.0%
ATCAACATTGGTATGGATGA+TGG - chr1_1:77255321-77255340 Msa0045340:intron 35.0%
!!! GAAGGTGTATGGCTATTTTT+TGG - chr1_1:77255387-77255406 Msa0045340:intron 35.0%
!!! GTGTATGGCTATTTTTTGGT+TGG - chr1_1:77255391-77255410 Msa0045340:intron 35.0%
! GGTTTAGGATGATATTACCT+TGG - chr1_1:77255531-77255550 Msa0045340:intron 35.0%
ACACCTTAACAATCTATCGT+TGG + chr1_1:77255626-77255645 None:intergenic 35.0%
TATTGATCATAATGTGGAGC+TGG - chr1_1:77255658-77255677 Msa0045340:intron 35.0%
CAAGGAAATCGGAGTGAATA+GGG + chr1_1:77245101-77245120 None:intergenic 40.0%
TCAAGGAAATCGGAGTGAAT+AGG + chr1_1:77245102-77245121 None:intergenic 40.0%
AAAAATTGAGGCGGGAATCA+AGG + chr1_1:77245119-77245138 None:intergenic 40.0%
!!! CGCCTCAATTTTTTCCTTTC+AGG - chr1_1:77245126-77245145 Msa0045340:three_prime_UTR 40.0%
! TCACTCTGATCTGCTTTGTT+TGG - chr1_1:77245156-77245175 Msa0045340:three_prime_UTR 40.0%
! ATGGGTCATGCAATTTTGCA+AGG - chr1_1:77245249-77245268 Msa0045340:three_prime_UTR 40.0%
!!! GGGTTTTTGGCTGCATTATT+AGG - chr1_1:77245310-77245329 Msa0045340:three_prime_UTR 40.0%
TTATGTGTGTTCTCCTTACG+TGG - chr1_1:77245367-77245386 Msa0045340:three_prime_UTR 40.0%
TATGTGTGTTCTCCTTACGT+GGG - chr1_1:77245368-77245387 Msa0045340:three_prime_UTR 40.0%
TAGTAAACTTTCCCCACGTA+AGG + chr1_1:77245383-77245402 None:intergenic 40.0%
TTACGTGGGGAAAGTTTACT+AGG - chr1_1:77245382-77245401 Msa0045340:three_prime_UTR 40.0%
TACGTGGGGAAAGTTTACTA+GGG - chr1_1:77245383-77245402 Msa0045340:three_prime_UTR 40.0%
CTGCAGATAGCATACACATT+AGG - chr1_1:77245431-77245450 Msa0045340:three_prime_UTR 40.0%
ATTAGGAAAAGGGGAATGAG+TGG - chr1_1:77245448-77245467 Msa0045340:three_prime_UTR 40.0%
! CTCGTAATCTGGAGTTTAGT+CGG - chr1_1:77245541-77245560 Msa0045340:CDS 40.0%
! TCGTAATCTGGAGTTTAGTC+GGG - chr1_1:77245542-77245561 Msa0045340:CDS 40.0%
AGGTGAAACAATTCATGGTC+GGG + chr1_1:77245590-77245609 None:intergenic 40.0%
GACCATGAATTGTTTCACCT+AGG - chr1_1:77245590-77245609 Msa0045340:CDS 40.0%
TGGACTGTTAATGTTGTCTC+TGG - chr1_1:77245764-77245783 Msa0045340:intron 40.0%
ACTGTTAATGTTGTCTCTGG+TGG - chr1_1:77245767-77245786 Msa0045340:intron 40.0%
TAAAAACACCGATAAGCAGC+AGG - chr1_1:77245989-77246008 Msa0045340:intron 40.0%
AAAAACACCGATAAGCAGCA+GGG - chr1_1:77245990-77246009 Msa0045340:intron 40.0%
!! TGGTTGCTGTTGTTCTCTTT+TGG - chr1_1:77246074-77246093 Msa0045340:intron 40.0%
CTCAGAATTAGTCAAGTGCT+GGG + chr1_1:77246158-77246177 None:intergenic 40.0%
CAGCACTTGACTAATTCTGA+GGG - chr1_1:77246157-77246176 Msa0045340:intron 40.0%
! GTTTGGAATTGGATAGCTCA+GGG + chr1_1:77246249-77246268 None:intergenic 40.0%
! TGTTTGGAATTGGATAGCTC+AGG + chr1_1:77246250-77246269 None:intergenic 40.0%
GTTGAATTGGTGAAATTGCC+TGG - chr1_1:77246284-77246303 Msa0045340:intron 40.0%
! GCCTGGGTAAATCGAAATTT+TGG - chr1_1:77246301-77246320 Msa0045340:intron 40.0%
ATAGGGTTTGTCATTCAACC+TGG + chr1_1:77246383-77246402 None:intergenic 40.0%
TCAGAGAAATGAAAATCGGC+CGG - chr1_1:77246611-77246630 Msa0045340:intron 40.0%
! AAATGAAAATCGGCCGGTTT+GGG - chr1_1:77246617-77246636 Msa0045340:intron 40.0%
!! GAAAGTATTGTTCCATGGGT+AGG - chr1_1:77246736-77246755 Msa0045340:intron 40.0%
ATCTTACTCAGAATTGGGGA+TGG + chr1_1:77246798-77246817 None:intergenic 40.0%
!! CAAGCCAATGCTTGATAATG+TGG - chr1_1:77247186-77247205 Msa0045340:CDS 40.0%
GTTAAGCCCAATAATCAACC+TGG - chr1_1:77247692-77247711 Msa0045340:intron 40.0%
CCAGATGATTGAAAAGATGG+TGG + chr1_1:77247830-77247849 None:intergenic 40.0%
! CCACCATCTTTTCAATCATC+TGG - chr1_1:77247827-77247846 Msa0045340:intron 40.0%
GCATACAAGAATCGTCATCA+TGG - chr1_1:77247926-77247945 Msa0045340:intron 40.0%
AAGAATCGTCATCATGGAGT+AGG - chr1_1:77247932-77247951 Msa0045340:intron 40.0%
!! TTTCGTGACAATTTTGGCAG+AGG - chr1_1:77247983-77248002 Msa0045340:intron 40.0%
!! AATTTTGGCAGAGGCAATGA+TGG - chr1_1:77247992-77248011 Msa0045340:intron 40.0%
GATCGTTTCACGAATCAGAA+TGG - chr1_1:77248016-77248035 Msa0045340:intron 40.0%
GTTTCACGAATCAGAATGGT+GGG - chr1_1:77248020-77248039 Msa0045340:intron 40.0%
TTTCCAAGCATCAAAGATGG+AGG + chr1_1:77248058-77248077 None:intergenic 40.0%
TCCATCTTTGATGCTTGGAA+AGG - chr1_1:77248057-77248076 Msa0045340:intron 40.0%
TAAACCTACCCAACTATCAC+AGG + chr1_1:77248429-77248448 None:intergenic 40.0%
! GGTTTAAGATGTAGTGCATG+TGG - chr1_1:77248443-77248462 Msa0045340:intron 40.0%
CTGAAACCATAAGGGAAACT+TGG - chr1_1:77249108-77249127 Msa0045340:intron 40.0%
TCTAGCCCATGAAACACAAA+TGG - chr1_1:77249183-77249202 Msa0045340:intron 40.0%
ACAGTAATCTGCCAAGTGTA+TGG - chr1_1:77249281-77249300 Msa0045340:intron 40.0%
CAGTAATCTGCCAAGTGTAT+GGG - chr1_1:77249282-77249301 Msa0045340:intron 40.0%
TGAAGACGATCTAGAGATCT+AGG + chr1_1:77249683-77249702 None:intergenic 40.0%
CAAACCTCTGTTGTCAATAG+CGG + chr1_1:77249982-77250001 None:intergenic 40.0%
TTATTGGGACACAATGTCAG+TGG - chr1_1:77250032-77250051 Msa0045340:CDS 40.0%
CACAATGTCAGTGGTGAATT+TGG - chr1_1:77250041-77250060 Msa0045340:CDS 40.0%
! AAAGAAGCTGATTTACCTGC+TGG - chr1_1:77250091-77250110 Msa0045340:CDS 40.0%
TGTACCTCTAATGAGACATC+AGG - chr1_1:77250123-77250142 Msa0045340:CDS 40.0%
AAACAGGAGTTTGCATTGCT+TGG - chr1_1:77250277-77250296 Msa0045340:CDS 40.0%
AACAGGAGTTTGCATTGCTT+GGG - chr1_1:77250278-77250297 Msa0045340:CDS 40.0%
TTGCTCTCATCCTAATGCAA+AGG - chr1_1:77250438-77250457 Msa0045340:intron 40.0%
TCTGTGATTGCCTTTGCATT+AGG + chr1_1:77250451-77250470 None:intergenic 40.0%
GAACTACTCGGTTCAGTAAT+AGG + chr1_1:77250605-77250624 None:intergenic 40.0%
AGAGAGCTTGATGAGAAAGT+TGG - chr1_1:77250704-77250723 Msa0045340:CDS 40.0%
ATATCATCCTCCTCGACTAA+CGG + chr1_1:77250854-77250873 None:intergenic 40.0%
GAAAAAGACGGGGAAAAGTT+TGG - chr1_1:77250878-77250897 Msa0045340:intron 40.0%
GAAGGGTAAAAAAGGTAGGA+AGG - chr1_1:77250958-77250977 Msa0045340:intron 40.0%
AAAGGTAGGAAGGGATTAGA+TGG - chr1_1:77250968-77250987 Msa0045340:intron 40.0%
CAGCATAAGGATCATACTTC+AGG + chr1_1:77251189-77251208 None:intergenic 40.0%
!! TCGTTTTCCTGGCTTGATTT+AGG - chr1_1:77251383-77251402 Msa0045340:intron 40.0%
CTCATTTCCTTCTCTACCTT+TGG - chr1_1:77251489-77251508 Msa0045340:intron 40.0%
!! TTTAGCTGAGGGTTTTGTAG+TGG - chr1_1:77251668-77251687 Msa0045340:intron 40.0%
GCATTCTGATGGGAATTTCA+GGG + chr1_1:77251747-77251766 None:intergenic 40.0%
AGCATTCTGATGGGAATTTC+AGG + chr1_1:77251748-77251767 None:intergenic 40.0%
TACTGTATGGGGGTGATTAT+TGG - chr1_1:77252039-77252058 Msa0045340:intron 40.0%
TGTCTAGGAACTTTGCTTGA+TGG - chr1_1:77252096-77252115 Msa0045340:intron 40.0%
! GAAGGTTGATTTCTCCTATG+AGG - chr1_1:77252161-77252180 Msa0045340:intron 40.0%
TTGATTTCTCCTATGAGGAG+CGG - chr1_1:77252166-77252185 Msa0045340:intron 40.0%
AGCTTCCAACTTCTTGTAGA+AGG + chr1_1:77252193-77252212 None:intergenic 40.0%
TCAACAGAATCTTTCCCAAC+AGG + chr1_1:77252563-77252582 None:intergenic 40.0%
AGATTGATCAGCATCTCCTT+TGG + chr1_1:77252602-77252621 None:intergenic 40.0%
TTGTGCCTCCTTAAAACATC+CGG - chr1_1:77252718-77252737 Msa0045340:CDS 40.0%
!!! CTATACCGGATGTTTTAAGG+AGG + chr1_1:77252726-77252745 None:intergenic 40.0%
! GTTTACTCTGGGCATGTTTT+AGG - chr1_1:77252888-77252907 Msa0045340:CDS 40.0%
! GGAGTTCTAGTTGTTAGTTG+TGG - chr1_1:77253039-77253058 Msa0045340:CDS 40.0%
TAGCACAATCCAAAACTACC+AGG - chr1_1:77253138-77253157 Msa0045340:CDS 40.0%
CATAGCTACTGTTTACCACT+CGG + chr1_1:77253362-77253381 None:intergenic 40.0%
! GCTCTGGCTGATTTATACTA+TGG - chr1_1:77253396-77253415 Msa0045340:CDS 40.0%
GAAATAACAGAGTCATCAGG+TGG + chr1_1:77253434-77253453 None:intergenic 40.0%
!! GACTCTGTTATTTCGATGTG+TGG - chr1_1:77253440-77253459 Msa0045340:intron 40.0%
! CGCATTGATAACAGAAGACA+TGG + chr1_1:77253466-77253485 None:intergenic 40.0%
GTACTCACTGTTCTGTACTA+GGG + chr1_1:77253648-77253667 None:intergenic 40.0%
TGTACTCACTGTTCTGTACT+AGG + chr1_1:77253649-77253668 None:intergenic 40.0%
AGTGAATCTCTATTGCCTTC+GGG + chr1_1:77253749-77253768 None:intergenic 40.0%
CAGTGAATCTCTATTGCCTT+CGG + chr1_1:77253750-77253769 None:intergenic 40.0%
GTCAAATACAGGAGACTTGA+TGG - chr1_1:77253935-77253954 Msa0045340:intron 40.0%
! AATACAGGAGACTTGATGGT+AGG - chr1_1:77253939-77253958 Msa0045340:intron 40.0%
GGATTTCAATACTGATCCTG+AGG - chr1_1:77253994-77254013 Msa0045340:intron 40.0%
TCAATACTGATCCTGAGGTT+TGG - chr1_1:77253999-77254018 Msa0045340:intron 40.0%
ATGCTGATGTCACTAAAAGC+AGG - chr1_1:77254294-77254313 Msa0045340:intron 40.0%
TCACTAAAAGCAGGAAACCT+TGG - chr1_1:77254303-77254322 Msa0045340:intron 40.0%
CGGCAACCATATTTAAACCA+AGG + chr1_1:77254323-77254342 None:intergenic 40.0%
AGAAAAGAATCCCCTCATGA+CGG + chr1_1:77254812-77254831 None:intergenic 40.0%
!! GGCATTCTTTTCAAGGGTTT+AGG - chr1_1:77254907-77254926 Msa0045340:intron 40.0%
! CTTAGCCACTTTAATTGGCA+GGG - chr1_1:77254982-77255001 Msa0045340:intron 40.0%
! TTAGCCACTTTAATTGGCAG+GGG - chr1_1:77254983-77255002 Msa0045340:intron 40.0%
TTAGTGAGCTTTGCAATCTC+CGG - chr1_1:77255069-77255088 Msa0045340:intron 40.0%
!! TTTTTGTGTTGGCCTGTATC+CGG - chr1_1:77255166-77255185 Msa0045340:intron 40.0%
AAAATGGTGGCATCTGCATT+TGG - chr1_1:77255204-77255223 Msa0045340:intron 40.0%
! ACTTCACATTTAGCTTCCGA+TGG - chr1_1:77255348-77255367 Msa0045340:intron 40.0%
! TGTGGAGTTATGAAGGTGTA+TGG - chr1_1:77255376-77255395 Msa0045340:intron 40.0%
!!! TATTTTTTGGTTGGCTGCTG+AGG - chr1_1:77255400-77255419 Msa0045340:intron 40.0%
!!! ATTTTTTGGTTGGCTGCTGA+GGG - chr1_1:77255401-77255420 Msa0045340:intron 40.0%
!!! TCTTTGTTTTGAAGCCCACA+AGG - chr1_1:77255446-77255465 Msa0045340:intron 40.0%
!!! CTTTGTTTTGAAGCCCACAA+GGG - chr1_1:77255447-77255466 Msa0045340:intron 40.0%
GAAGACAAAAATGCCCTTGT+GGG + chr1_1:77255463-77255482 None:intergenic 40.0%
! TTTTTGTCTTCCCAACTGCT+AGG - chr1_1:77255472-77255491 Msa0045340:intron 40.0%
CTTTAAGCTACCTAGCAGTT+GGG + chr1_1:77255485-77255504 None:intergenic 40.0%
GAGCCAACGATAGATTGTTA+AGG - chr1_1:77255620-77255639 Msa0045340:intron 40.0%
TGAGAGAGAGAGAGAGACTA+GGG + chr1_1:77245022-77245041 None:intergenic 45.0%
ATGAGAGAGAGAGAGAGACT+AGG + chr1_1:77245023-77245042 None:intergenic 45.0%
ATGTGTGTTCTCCTTACGTG+GGG - chr1_1:77245369-77245388 Msa0045340:three_prime_UTR 45.0%
CGACTAAACTCCAGATTACG+AGG + chr1_1:77245543-77245562 None:intergenic 45.0%
! AATCTGGAGTTTAGTCGGGT+CGG - chr1_1:77245546-77245565 Msa0045340:CDS 45.0%
TTTCACCTAGGAATCAGACG+CGG - chr1_1:77245602-77245621 Msa0045340:intron 45.0%
TCGTACTTATCGTGCTCAAG+TGG + chr1_1:77245667-77245686 None:intergenic 45.0%
CCTCAGAATTAGTCAAGTGC+TGG + chr1_1:77246159-77246178 None:intergenic 45.0%
CCAGCACTTGACTAATTCTG+AGG - chr1_1:77246156-77246175 Msa0045340:intron 45.0%
GAGAGAAGAGACCCTGAATA+GGG + chr1_1:77246400-77246419 None:intergenic 45.0%
AGAGAGAAGAGACCCTGAAT+AGG + chr1_1:77246401-77246420 None:intergenic 45.0%
ACACAGACTTCTGAACGACA+CGG + chr1_1:77246477-77246496 None:intergenic 45.0%
GATGGTGAAAAGGAGAGCAA+AGG - chr1_1:77246525-77246544 Msa0045340:intron 45.0%
GAAATGAAAATCGGCCGGTT+TGG - chr1_1:77246616-77246635 Msa0045340:intron 45.0%
GAATTGAATTGGGCCCAAAC+CGG + chr1_1:77246633-77246652 None:intergenic 45.0%
!! TACTTCTTTTTAGCCGGTGG+AGG - chr1_1:77246664-77246683 Msa0045340:intron 45.0%
TCTCAGATACGTACGCCAAA+AGG + chr1_1:77246979-77246998 None:intergenic 45.0%
GCGTACGTATCTGAGAATTG+TGG - chr1_1:77246983-77247002 Msa0045340:CDS 45.0%
CGTATCTGAGAATTGTGGCT+TGG - chr1_1:77246988-77247007 Msa0045340:CDS 45.0%
AAGGAAACTGTAATGCGGCT+CGG - chr1_1:77247159-77247178 Msa0045340:CDS 45.0%
TGGAGACTATGTGCTCTTGT+AGG - chr1_1:77247229-77247248 Msa0045340:CDS 45.0%
AGACTATGTGCTCTTGTAGG+TGG - chr1_1:77247232-77247251 Msa0045340:CDS 45.0%
TATGTGCTCTTGTAGGTGGT+TGG - chr1_1:77247236-77247255 Msa0045340:CDS 45.0%
ATGTGCTCTTGTAGGTGGTT+GGG - chr1_1:77247237-77247256 Msa0045340:CDS 45.0%
! TTTCTAGGTTGGGCAACGAA+AGG - chr1_1:77247404-77247423 Msa0045340:intron 45.0%
! TTCTAGGTTGGGCAACGAAA+GGG - chr1_1:77247405-77247424 Msa0045340:intron 45.0%
TTGGAGGTGATTGTAGATCC+TGG - chr1_1:77247487-77247506 Msa0045340:intron 45.0%
TGGAGGTGATTGTAGATCCT+GGG - chr1_1:77247488-77247507 Msa0045340:intron 45.0%
TGGGAGGATTCTTCCAAGAT+GGG - chr1_1:77247507-77247526 Msa0045340:intron 45.0%
! GCTGCTTCTGAAAGGAATTC+AGG - chr1_1:77247529-77247548 Msa0045340:intron 45.0%
! GCTTCTGAAAGGAATTCAGG+TGG - chr1_1:77247532-77247551 Msa0045340:intron 45.0%
!! CTCGGACCAGGTTGATTATT+GGG + chr1_1:77247701-77247720 None:intergenic 45.0%
! TGACTTGTGCTTCCATTGCT+CGG + chr1_1:77247719-77247738 None:intergenic 45.0%
TTTCTCATAACCGGCACCAT+TGG + chr1_1:77247774-77247793 None:intergenic 45.0%
TTAGGTGCAAATGACGAAGG+TGG + chr1_1:77247866-77247885 None:intergenic 45.0%
CGTTTCACGAATCAGAATGG+TGG - chr1_1:77248019-77248038 Msa0045340:intron 45.0%
! GAATCAGAATGGTGGGATCA+GGG - chr1_1:77248027-77248046 Msa0045340:intron 45.0%
CTTCCTCCATCTTTGATGCT+TGG - chr1_1:77248052-77248071 Msa0045340:intron 45.0%
GCCTTTCCAAGCATCAAAGA+TGG + chr1_1:77248061-77248080 None:intergenic 45.0%
TCACTAGAACTAGCAAACGG+TGG + chr1_1:77248091-77248110 None:intergenic 45.0%
TTTCATCACCTGCTCCAGAA+CGG + chr1_1:77248123-77248142 None:intergenic 45.0%
!! TTCTGGAGCAGGTGATGAAA+GGG - chr1_1:77248123-77248142 Msa0045340:intron 45.0%
GAAACCTGTGATAGTTGGGT+AGG - chr1_1:77248422-77248441 Msa0045340:intron 45.0%
TACGGCAGTGCTCTTTATAG+AGG + chr1_1:77248841-77248860 None:intergenic 45.0%
GCATGTCCAAGTTTCCCTTA+TGG + chr1_1:77249117-77249136 None:intergenic 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr1_1:77249454-77249473 Msa0045340:intron 45.0%
TTGTCAATAGCGGTCTAACG+CGG + chr1_1:77249972-77249991 None:intergenic 45.0%
TAGACCGCTATTGACAACAG+AGG - chr1_1:77249975-77249994 Msa0045340:CDS 45.0%
GTGGTGAATTTGGTTGTTGC+AGG - chr1_1:77250051-77250070 Msa0045340:CDS 45.0%
GGTACAGACATTATACCAGC+AGG + chr1_1:77250109-77250128 None:intergenic 45.0%
!! TCCAGAAAATTGCACTGGCT+TGG - chr1_1:77250240-77250259 Msa0045340:CDS 45.0%
! TCCAAGCCAGTGCAATTTTC+TGG + chr1_1:77250244-77250263 None:intergenic 45.0%
ACAGGAGTTTGCATTGCTTG+GGG - chr1_1:77250279-77250298 Msa0045340:CDS 45.0%
ACCTTGTTCAAACAGGGTCT+TGG - chr1_1:77250398-77250417 Msa0045340:intron 45.0%
TCCAAGACCCTGTTTGAACA+AGG + chr1_1:77250402-77250421 None:intergenic 45.0%
TGAACCGAGTAGTTCAACAC+AGG - chr1_1:77250610-77250629 Msa0045340:intron 45.0%
! TGATTTTTCATGGGGGCAGT+AGG - chr1_1:77250747-77250766 Msa0045340:intron 45.0%
TCCTCGACTAACGGTTGTTT+GGG + chr1_1:77250845-77250864 None:intergenic 45.0%
! GGCTTATCCTCCGATTTTTC+TGG - chr1_1:77250899-77250918 Msa0045340:intron 45.0%
GATGGCTCTTCTTTCGATTG+CGG - chr1_1:77250986-77251005 Msa0045340:intron 45.0%
! ACCACCTTCTTTTTGCCCTA+AGG + chr1_1:77251108-77251127 None:intergenic 45.0%
AAAAGAAGGTGGTGCTTGTC+TGG - chr1_1:77251115-77251134 Msa0045340:intron 45.0%
TCTGGCTGCTAAGTCTTGAT+TGG - chr1_1:77251342-77251361 Msa0045340:intron 45.0%
TACTACTGTGGTGGTACCAA+AGG + chr1_1:77251508-77251527 None:intergenic 45.0%
! AACGTGTGCTGATACTACTG+TGG + chr1_1:77251520-77251539 None:intergenic 45.0%
GCACACGTTCATTCTTGTAC+AGG - chr1_1:77251531-77251550 Msa0045340:intron 45.0%
GAGTATGAAAAGCGAGTCAC+TGG - chr1_1:77251592-77251611 Msa0045340:intron 45.0%
GCATGGCAAGAATTCTTTCC+AGG + chr1_1:77251622-77251641 None:intergenic 45.0%
! ATTATGGAAGGTGGCTTGCA+TGG + chr1_1:77251639-77251658 None:intergenic 45.0%
TCTGATGGGAATTTCAGGGA+GGG + chr1_1:77251743-77251762 None:intergenic 45.0%
TTCTGATGGGAATTTCAGGG+AGG + chr1_1:77251744-77251763 None:intergenic 45.0%
ATATTGTTTGGCTGAGGGAG+TGG - chr1_1:77251958-77251977 Msa0045340:intron 45.0%
AGTGGACATCATCAAGGTAC+TGG - chr1_1:77251976-77251995 Msa0045340:intron 45.0%
TGATTTCTCCTATGAGGAGC+GGG - chr1_1:77252167-77252186 Msa0045340:intron 45.0%
! AATGCTTTTACGTCTCCGTC+AGG - chr1_1:77252496-77252515 Msa0045340:intron 45.0%
! AGGAGGCACAATTGCAACAA+AGG + chr1_1:77252709-77252728 None:intergenic 45.0%
ATCCAAAACTACCAGGTAGC+AGG - chr1_1:77253145-77253164 Msa0045340:CDS 45.0%
AAATCACATCACCTGCTACC+TGG + chr1_1:77253159-77253178 None:intergenic 45.0%
GTTAACCTGTTATTGCCGAG+TGG - chr1_1:77253344-77253363 Msa0045340:CDS 45.0%
GTTTACCACTCGGCAATAAC+AGG + chr1_1:77253352-77253371 None:intergenic 45.0%
TGCATTGTCATTAAGGGCTC+TGG - chr1_1:77253380-77253399 Msa0045340:CDS 45.0%
GCAACTCCTCAAAGTTGCTT+TGG + chr1_1:77253570-77253589 None:intergenic 45.0%
AACTTGACTGCAGAACCTCA+AGG + chr1_1:77253694-77253713 None:intergenic 45.0%
TGAATCTCTATTGCCTTCGG+GGG + chr1_1:77253747-77253766 None:intergenic 45.0%
GTGAATCTCTATTGCCTTCG+GGG + chr1_1:77253748-77253767 None:intergenic 45.0%
TATTCAGAGTGCACATCTGG+AGG - chr1_1:77253836-77253855 Msa0045340:intron 45.0%
!! TTCTCAGTGGACTAGCATGT+TGG - chr1_1:77253880-77253899 Msa0045340:intron 45.0%
GAGACATCAATGGAGCAATC+TGG - chr1_1:77253911-77253930 Msa0045340:intron 45.0%
AGCAATCTGGCGTCAAATAC+AGG - chr1_1:77253924-77253943 Msa0045340:intron 45.0%
TAGGATGACTCTTACTGCGA+GGG - chr1_1:77253958-77253977 Msa0045340:intron 45.0%
ACTGATTAGCAGTGCACTCA+GGG + chr1_1:77254165-77254184 None:intergenic 45.0%
! TACTGATTAGCAGTGCACTC+AGG + chr1_1:77254166-77254185 None:intergenic 45.0%
CAGTAGTTGGATTCCACCAA+AGG + chr1_1:77254368-77254387 None:intergenic 45.0%
GCTTCTAAGCCGAATTACTG+GGG + chr1_1:77254576-77254595 None:intergenic 45.0%
CGCTTCTAAGCCGAATTACT+GGG + chr1_1:77254577-77254596 None:intergenic 45.0%
TCGCTTCTAAGCCGAATTAC+TGG + chr1_1:77254578-77254597 None:intergenic 45.0%
TAATTCGGCTTAGAAGCGAG+TGG - chr1_1:77254579-77254598 Msa0045340:intron 45.0%
AATTCGGCTTAGAAGCGAGT+GGG - chr1_1:77254580-77254599 Msa0045340:intron 45.0%
CATGTGACTAGGATGGTCAT+GGG - chr1_1:77254726-77254745 Msa0045340:intron 45.0%
CCTGCCAATTAAAGTGGCTA+AGG + chr1_1:77254984-77255003 None:intergenic 45.0%
! CCTTAGCCACTTTAATTGGC+AGG - chr1_1:77254981-77255000 Msa0045340:intron 45.0%
ACTCTTCCTGTATCGTTTGG+AGG + chr1_1:77255014-77255033 None:intergenic 45.0%
TAGTGAGCTTTGCAATCTCC+GGG - chr1_1:77255070-77255089 Msa0045340:intron 45.0%
ATAACTCCACACAGAGCCAT+CGG + chr1_1:77255367-77255386 None:intergenic 45.0%
GGAAGACAAAAATGCCCTTG+TGG + chr1_1:77255464-77255483 None:intergenic 45.0%
! GCTTTAAGCTACCTAGCAGT+TGG + chr1_1:77255486-77255505 None:intergenic 45.0%
ACAACATACGCAAGGTCACA+TGG + chr1_1:77255687-77255706 None:intergenic 45.0%
!! ATAATAATAATAAAAAGATA+CGG + chr1_1:77248859-77248878 None:intergenic 5.0%
GAGGCGGGAATCAAGGAAAT+CGG + chr1_1:77245112-77245131 None:intergenic 50.0%
AGGAAAAGGGGAATGAGTGG+CGG - chr1_1:77245451-77245470 Msa0045340:three_prime_UTR 50.0%
GTGTGTTAACCCTCCTGTTC+CGG - chr1_1:77245506-77245525 Msa0045340:exon 50.0%
TGTGTTAACCCTCCTGTTCC+GGG - chr1_1:77245507-77245526 Msa0045340:exon 50.0%
! ATCTGGAGTTTAGTCGGGTC+GGG - chr1_1:77245547-77245566 Msa0045340:CDS 50.0%
TTCACCTAGGAATCAGACGC+GGG - chr1_1:77245603-77245622 Msa0045340:intron 50.0%
CACCAAAGCACGAATCGTTC+GGG + chr1_1:77245633-77245652 None:intergenic 50.0%
CCACCAAAGCACGAATCGTT+CGG + chr1_1:77245634-77245653 None:intergenic 50.0%
ACGAATTGTTCGGGAGAACC+CGG + chr1_1:77245821-77245840 None:intergenic 50.0%
TCTCCCGAACAATTCGTGCT+TGG - chr1_1:77245824-77245843 Msa0045340:intron 50.0%
CTCCCGAACAATTCGTGCTT+GGG - chr1_1:77245825-77245844 Msa0045340:intron 50.0%
CACCCAAGCACGAATTGTTC+GGG + chr1_1:77245830-77245849 None:intergenic 50.0%
CCACCCAAGCACGAATTGTT+CGG + chr1_1:77245831-77245850 None:intergenic 50.0%
CAGATCTGCAACCAGTTTGC+TGG - chr1_1:77246357-77246376 Msa0045340:CDS 50.0%
ATTCAACCTGGCCAGCAAAC+TGG + chr1_1:77246371-77246390 None:intergenic 50.0%
GAACGACACGGGAGAAGAAA+AGG + chr1_1:77246465-77246484 None:intergenic 50.0%
CACAGACTTCTGAACGACAC+GGG + chr1_1:77246476-77246495 None:intergenic 50.0%
GCGTGCGTGTTTGTTTGTGA+TGG - chr1_1:77246507-77246526 Msa0045340:intron 50.0%
!! TTTTTAGCCGGTGGAGGCAT+TGG - chr1_1:77246670-77246689 Msa0045340:intron 50.0%
!!! TTTTAGCCGGTGGAGGCATT+GGG - chr1_1:77246671-77246690 Msa0045340:intron 50.0%
CTTGTAGGTGGTTGGGTTTC+TGG - chr1_1:77247244-77247263 Msa0045340:CDS 50.0%
!! CAGGTTGGCTCTGCATTTGA+TGG - chr1_1:77247376-77247395 Msa0045340:intron 50.0%
TAGTTCGTCGGACGATGAGT+TGG - chr1_1:77247468-77247487 Msa0045340:intron 50.0%
AGGTGATTGTAGATCCTGGG+AGG - chr1_1:77247491-77247510 Msa0045340:intron 50.0%
CATCTTGGAAGAATCCTCCC+AGG + chr1_1:77247508-77247527 None:intergenic 50.0%
CTGGGAGGATTCTTCCAAGA+TGG - chr1_1:77247506-77247525 Msa0045340:intron 50.0%
CTTTCAGAAGCAGCCCATCT+TGG + chr1_1:77247523-77247542 None:intergenic 50.0%
!! CAAGATGGGCTGCTTCTGAA+AGG - chr1_1:77247521-77247540 Msa0045340:intron 50.0%
!! GCTCGGACCAGGTTGATTAT+TGG + chr1_1:77247702-77247721 None:intergenic 50.0%
AATCAACCTGGTCCGAGCAA+TGG - chr1_1:77247704-77247723 Msa0045340:intron 50.0%
ACCTAGCACATCTGGTGAGA+AGG - chr1_1:77247955-77247974 Msa0045340:intron 50.0%
CCTAGCACATCTGGTGAGAA+GGG - chr1_1:77247956-77247975 Msa0045340:intron 50.0%
! CGAATCAGAATGGTGGGATC+AGG - chr1_1:77248026-77248045 Msa0045340:intron 50.0%
AGTGAATCTGCGTACCGTTC+TGG - chr1_1:77248106-77248125 Msa0045340:intron 50.0%
!! GTTCTGGAGCAGGTGATGAA+AGG - chr1_1:77248122-77248141 Msa0045340:intron 50.0%
! ACCTTCTAGCTGCTGCTAGT+AGG - chr1_1:77248721-77248740 Msa0045340:intron 50.0%
ACCTACTAGCAGCAGCTAGA+AGG + chr1_1:77248725-77248744 None:intergenic 50.0%
!! ACTGGCTTGGATGCTTCAGA+GGG - chr1_1:77250253-77250272 Msa0045340:CDS 50.0%
GGATGCTTCAGAGGGAAAAC+AGG - chr1_1:77250261-77250280 Msa0045340:CDS 50.0%
CAGGAGTTTGCATTGCTTGG+GGG - chr1_1:77250280-77250299 Msa0045340:CDS 50.0%
AGGAGTTTGCATTGCTTGGG+GGG - chr1_1:77250281-77250300 Msa0045340:CDS 50.0%
!!! GGGGATTTTGGCTGATGATC+AGG - chr1_1:77250301-77250320 Msa0045340:CDS 50.0%
! GCTTCAGCTTTATGGTTGCG+TGG + chr1_1:77250494-77250513 None:intergenic 50.0%
TCTGCCCTGCAAGTGTTCTT+CGG - chr1_1:77250672-77250691 Msa0045340:CDS 50.0%
ACTGCCGAAGAACACTTGCA+GGG + chr1_1:77250679-77250698 None:intergenic 50.0%
TGCAAGTGTTCTTCGGCAGT+GGG - chr1_1:77250679-77250698 Msa0045340:CDS 50.0%
TCCCAAACAACCGTTAGTCG+AGG - chr1_1:77250841-77250860 Msa0045340:intron 50.0%
CTCCTCGACTAACGGTTGTT+TGG + chr1_1:77250846-77250865 None:intergenic 50.0%
CAAACAACCGTTAGTCGAGG+AGG - chr1_1:77250844-77250863 Msa0045340:intron 50.0%
GCGCTCTTGCAAAAGTAGGT+TGG - chr1_1:77251011-77251030 Msa0045340:intron 50.0%
! CCTTCTTTTTGCCCTAAGGC+TGG + chr1_1:77251104-77251123 None:intergenic 50.0%
CCAGCCTTAGGGCAAAAAGA+AGG - chr1_1:77251101-77251120 Msa0045340:intron 50.0%
GCCTTAGGGCAAAAAGAAGG+TGG - chr1_1:77251104-77251123 Msa0045340:intron 50.0%
GGTGGTACCAAAGGTAGAGA+AGG + chr1_1:77251499-77251518 None:intergenic 50.0%
! GTGTGCTGATACTACTGTGG+TGG + chr1_1:77251517-77251536 None:intergenic 50.0%
TGAGGGAGTGGACATCATCA+AGG - chr1_1:77251970-77251989 Msa0045340:intron 50.0%
! TCAGGAGGTACACTTCTCGA+TGG - chr1_1:77252821-77252840 Msa0045340:CDS 50.0%
TTTAGGGGGGATGCATTCCA+TGG - chr1_1:77253105-77253124 Msa0045340:CDS 50.0%
TTAGGGGGGATGCATTCCAT+GGG - chr1_1:77253106-77253125 Msa0045340:CDS 50.0%
! CACCTGCTACCTGGTAGTTT+TGG + chr1_1:77253150-77253169 None:intergenic 50.0%
AGTTGCCTCTGTGACGATCT+TGG - chr1_1:77253584-77253603 Msa0045340:CDS 50.0%
TACCACCAAGATCGTCACAG+AGG + chr1_1:77253592-77253611 None:intergenic 50.0%
CACATCTGGAGGACCACTAA+AGG - chr1_1:77253847-77253866 Msa0045340:intron 50.0%
!! GTGGACTAGCATGTTGGACT+TGG - chr1_1:77253886-77253905 Msa0045340:intron 50.0%
! GGACTTGGTCGAGACATCAA+TGG - chr1_1:77253901-77253920 Msa0045340:intron 50.0%
GTAGGATGACTCTTACTGCG+AGG - chr1_1:77253957-77253976 Msa0045340:intron 50.0%
CTCGTCCTGTTACTGTGACA+CGG - chr1_1:77254427-77254446 Msa0045340:intron 50.0%
GTGATCCGTGTCACAGTAAC+AGG + chr1_1:77254435-77254454 None:intergenic 50.0%
ATTCGGCTTAGAAGCGAGTG+GGG - chr1_1:77254581-77254600 Msa0045340:intron 50.0%
! TTCTATCATTGCTGACGGGC+CGG - chr1_1:77254669-77254688 Msa0045340:intron 50.0%
AGAGTTGTCGCCATGTGACT+AGG - chr1_1:77254715-77254734 Msa0045340:intron 50.0%
TTGTCGCCATGTGACTAGGA+TGG - chr1_1:77254719-77254738 Msa0045340:intron 50.0%
CCATGACCATCCTAGTCACA+TGG + chr1_1:77254728-77254747 None:intergenic 50.0%
CCATGTGACTAGGATGGTCA+TGG - chr1_1:77254725-77254744 Msa0045340:intron 50.0%
ATGGTCATGGGTTCAAGTCG+TGG - chr1_1:77254738-77254757 Msa0045340:intron 50.0%
TGGTCATGGGTTCAAGTCGT+GGG - chr1_1:77254739-77254758 Msa0045340:intron 50.0%
ACGGAGCTCGGAAAGTTACA+TGG + chr1_1:77254793-77254812 None:intergenic 50.0%
GATCAATGCCCATTGGACCA+TGG + chr1_1:77254951-77254970 None:intergenic 50.0%
AGCACCCCTGCCAATTAAAG+TGG + chr1_1:77254990-77255009 None:intergenic 50.0%
GTGCTTCCTCCAAACGATAC+AGG - chr1_1:77255005-77255024 Msa0045340:intron 50.0%
AGTGAGCTTTGCAATCTCCG+GGG - chr1_1:77255071-77255090 Msa0045340:intron 50.0%
! CTTTTCTTCCTGCCGGATAC+AGG + chr1_1:77255181-77255200 None:intergenic 50.0%
GGCTCTGTGTGGAGTTATGA+AGG - chr1_1:77255369-77255388 Msa0045340:intron 50.0%
! CCAAATTTCACCAGCACTGG+GGG + chr1_1:77255712-77255731 None:intergenic 50.0%
GCCAAATTTCACCAGCACTG+GGG + chr1_1:77255713-77255732 None:intergenic 50.0%
CGCCAAATTTCACCAGCACT+GGG + chr1_1:77255714-77255733 None:intergenic 50.0%
TCGCCAAATTTCACCAGCAC+TGG + chr1_1:77255715-77255734 None:intergenic 50.0%
GTGTTAACCCTCCTGTTCCG+GGG - chr1_1:77245508-77245527 Msa0045340:exon 55.0%
GAAGGGGCTACCTCGTAATC+TGG - chr1_1:77245530-77245549 Msa0045340:CDS 55.0%
GAGTTTAGTCGGGTCGGGAT+GGG - chr1_1:77245552-77245571 Msa0045340:CDS 55.0%
AGAACCCGCGTCTGATTCCT+AGG + chr1_1:77245610-77245629 None:intergenic 55.0%
CTCCCGAACGATTCGTGCTT+TGG - chr1_1:77245628-77245647 Msa0045340:intron 55.0%
CCGAACGATTCGTGCTTTGG+TGG - chr1_1:77245631-77245650 Msa0045340:intron 55.0%
TCGGGAGAACCCGGATTCAT+GGG + chr1_1:77245812-77245831 None:intergenic 55.0%
TTCGGGAGAACCCGGATTCA+TGG + chr1_1:77245813-77245832 None:intergenic 55.0%
CCGAACAATTCGTGCTTGGG+TGG - chr1_1:77245828-77245847 Msa0045340:intron 55.0%
! CCGTGTACCCTGCTGCTTAT+CGG + chr1_1:77246000-77246019 None:intergenic 55.0%
CCGATAAGCAGCAGGGTACA+CGG - chr1_1:77245997-77246016 Msa0045340:intron 55.0%
AGACGGTGAGCAGACGAGAA+AGG - chr1_1:77246561-77246580 Msa0045340:intron 55.0%
GACGGTGAGCAGACGAGAAA+GGG - chr1_1:77246562-77246581 Msa0045340:intron 55.0%
ACGGTGAGCAGACGAGAAAG+GGG - chr1_1:77246563-77246582 Msa0045340:intron 55.0%
CGAGAAAGGGGAAGAGAGAG+CGG - chr1_1:77246575-77246594 Msa0045340:intron 55.0%
GAGAAAGGGGAAGAGAGAGC+GGG - chr1_1:77246576-77246595 Msa0045340:intron 55.0%
AGAAAGGGGAAGAGAGAGCG+GGG - chr1_1:77246577-77246596 Msa0045340:intron 55.0%
ATACAGCCCAATGCCTCCAC+CGG + chr1_1:77246680-77246699 None:intergenic 55.0%
! TTCGTCGGACGATGAGTTGG+AGG - chr1_1:77247471-77247490 Msa0045340:intron 55.0%
GGAGTAGGACCTAGCACATC+TGG - chr1_1:77247947-77247966 Msa0045340:intron 55.0%
CCCTTCTCACCAGATGTGCT+AGG + chr1_1:77247959-77247978 None:intergenic 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr1_1:77249485-77249504 Msa0045340:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr1_1:77249494-77249513 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr1_1:77249495-77249514 None:intergenic 55.0%
AGCAAAAAGCGGGTCAACGC+GGG + chr1_1:77249863-77249882 None:intergenic 55.0%
GAGCAAAAAGCGGGTCAACG+CGG + chr1_1:77249864-77249883 None:intergenic 55.0%
GCTCAACGCGAGCAAAAAGC+GGG + chr1_1:77249873-77249892 None:intergenic 55.0%
GGCTCAACGCGAGCAAAAAG+CGG + chr1_1:77249874-77249893 None:intergenic 55.0%
AGTCGCGCGTTAGGCAAAAG+CGG + chr1_1:77249895-77249914 None:intergenic 55.0%
! CTTTTGCCTAACGCGCGACT+CGG - chr1_1:77249895-77249914 Msa0045340:CDS 55.0%
!! CACTGGCTTGGATGCTTCAG+AGG - chr1_1:77250252-77250271 Msa0045340:CDS 55.0%
GGAGTTTGCATTGCTTGGGG+GGG - chr1_1:77250282-77250301 Msa0045340:CDS 55.0%
! GCATTGCTTGGGGGGGATTT+TGG - chr1_1:77250289-77250308 Msa0045340:CDS 55.0%
GGGGCCTGTGTTGAACTACT+CGG + chr1_1:77250617-77250636 None:intergenic 55.0%
AGTAGTTCAACACAGGCCCC+AGG - chr1_1:77250617-77250636 Msa0045340:intron 55.0%
!!! AGCTGGCCTTTTCCTACCTG+GGG + chr1_1:77250636-77250655 None:intergenic 55.0%
!!! CAGCTGGCCTTTTCCTACCT+GGG + chr1_1:77250637-77250656 None:intergenic 55.0%
ACAACCAGTGTACCAGCAGC+TGG + chr1_1:77250653-77250672 None:intergenic 55.0%
CACTGCCGAAGAACACTTGC+AGG + chr1_1:77250680-77250699 None:intergenic 55.0%
CTGCAAGTGTTCTTCGGCAG+TGG - chr1_1:77250678-77250697 Msa0045340:CDS 55.0%
TCATGGGGGCAGTAGGACAA+AGG - chr1_1:77250754-77250773 Msa0045340:intron 55.0%
GGCTCTTCTTTCGATTGCGG+TGG - chr1_1:77250989-77251008 Msa0045340:intron 55.0%
GGTGGCGCTCTTGCAAAAGT+AGG - chr1_1:77251007-77251026 Msa0045340:intron 55.0%
! CAGAGCTTGCTCCAGCCTTA+GGG - chr1_1:77251090-77251109 Msa0045340:intron 55.0%
AAGCGAGTCACTGGTGATCC+TGG - chr1_1:77251601-77251620 Msa0045340:intron 55.0%
GCGGGCCTTCTACAAGAAGT+TGG - chr1_1:77252185-77252204 Msa0045340:intron 55.0%
TTGCAGGCATATGCAGCTGC+TGG - chr1_1:77252440-77252459 Msa0045340:intron 55.0%
TGCCTCTGTGACGATCTTGG+TGG - chr1_1:77253587-77253606 Msa0045340:CDS 55.0%
!! TCGGGGGTATTCAGTAAGCC+AGG + chr1_1:77253731-77253750 None:intergenic 55.0%
GGCTTACTGAATACCCCCGA+AGG - chr1_1:77253731-77253750 Msa0045340:intron 55.0%
TGCGAGGGACAGAGCTGTTA+AGG - chr1_1:77253973-77253992 Msa0045340:intron 55.0%
ATTGGGGATGGCCAAACCTC+AGG + chr1_1:77254013-77254032 None:intergenic 55.0%
TTCGGCTTAGAAGCGAGTGG+GGG - chr1_1:77254582-77254601 Msa0045340:intron 55.0%
! TCTATCATTGCTGACGGGCC+GGG - chr1_1:77254670-77254689 Msa0045340:intron 55.0%
ACTTTCCGAGCTCCGTCATG+AGG - chr1_1:77254797-77254816 Msa0045340:intron 55.0%
CTTTCCGAGCTCCGTCATGA+GGG - chr1_1:77254798-77254817 Msa0045340:intron 55.0%
TTTCCGAGCTCCGTCATGAG+GGG - chr1_1:77254799-77254818 Msa0045340:intron 55.0%
! AATCCCCTCATGACGGAGCT+CGG + chr1_1:77254805-77254824 None:intergenic 55.0%
GCATTTGGCGAAGACCATGC+TGG - chr1_1:77255219-77255238 Msa0045340:intron 55.0%
TTTGGCGAAGACCATGCTGG+CGG - chr1_1:77255222-77255241 Msa0045340:intron 55.0%
!! ATGCTGGCGGTTCTGGAACT+CGG - chr1_1:77255235-77255254 Msa0045340:intron 55.0%
! TAGCTTCCGATGGCTCTGTG+TGG - chr1_1:77255358-77255377 Msa0045340:intron 55.0%
TGGGGGCAACAACATACGCA+AGG + chr1_1:77255695-77255714 None:intergenic 55.0%
TATGTTGTTGCCCCCAGTGC+TGG - chr1_1:77255699-77255718 Msa0045340:five_prime_UTR 55.0%
!! CCCCCAGTGCTGGTGAAATT+TGG - chr1_1:77255709-77255728 Msa0045340:five_prime_UTR 55.0%
TAACCCTCCTGTTCCGGGGA+AGG - chr1_1:77245512-77245531 Msa0045340:exon 60.0%
AACCCTCCTGTTCCGGGGAA+GGG - chr1_1:77245513-77245532 Msa0045340:exon 60.0%
TTACGAGGTAGCCCCTTCCC+CGG + chr1_1:77245528-77245547 None:intergenic 60.0%
GGAGTTTAGTCGGGTCGGGA+TGG - chr1_1:77245551-77245570 Msa0045340:CDS 60.0%
TTTAGTCGGGTCGGGATGGG+AGG - chr1_1:77245555-77245574 Msa0045340:CDS 60.0%
!! CTGCAACCAGTTTGCTGGCC+AGG - chr1_1:77246362-77246381 Msa0045340:CDS 60.0%
!! GGTGGAGGCATTGGGCTGTA+TGG - chr1_1:77246679-77246698 Msa0045340:intron 60.0%
GTGCTTCCATTGCTCGGACC+AGG + chr1_1:77247713-77247732 None:intergenic 60.0%
!! TCTGCGTACCGTTCTGGAGC+AGG - chr1_1:77248112-77248131 Msa0045340:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr1_1:77249490-77249509 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr1_1:77249493-77249512 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr1_1:77249490-77249509 Msa0045340:intron 60.0%
AATTGACGCGGCGCGGTAAG+CGG - chr1_1:77249497-77249516 Msa0045340:CDS 60.0%
! GCGGGCGCTTTTACATGACG+CGG - chr1_1:77249527-77249546 Msa0045340:CDS 60.0%
! CGGGCGCTTTTACATGACGC+GGG - chr1_1:77249528-77249547 Msa0045340:CDS 60.0%
GGTCAACGCGGGCAAAAAGC+GGG + chr1_1:77249852-77249871 None:intergenic 60.0%
GGGTCAACGCGGGCAAAAAG+CGG + chr1_1:77249853-77249872 None:intergenic 60.0%
GTTCAACACAGGCCCCAGGT+AGG - chr1_1:77250621-77250640 Msa0045340:intron 60.0%
CACAGGCCCCAGGTAGGAAA+AGG - chr1_1:77250627-77250646 Msa0045340:intron 60.0%
!!! GCAGCTGGCCTTTTCCTACC+TGG + chr1_1:77250638-77250657 None:intergenic 60.0%
GGTAGGAAAAGGCCAGCTGC+TGG - chr1_1:77250638-77250657 Msa0045340:intron 60.0%
AAGGCCAGCTGCTGGTACAC+TGG - chr1_1:77250646-77250665 Msa0045340:intron 60.0%
CCTAAGGCTGGAGCAAGCTC+TGG + chr1_1:77251092-77251111 None:intergenic 60.0%
! CCAGAGCTTGCTCCAGCCTT+AGG - chr1_1:77251089-77251108 Msa0045340:intron 60.0%
GTAGAAGGCCCGCTCCTCAT+AGG + chr1_1:77252178-77252197 None:intergenic 60.0%
GCGGGTGATCACAAGCCTGA+CGG + chr1_1:77252514-77252533 None:intergenic 60.0%
TCGGCTTAGAAGCGAGTGGG+GGG - chr1_1:77254583-77254602 Msa0045340:intron 60.0%
GAAGCGAGTGGGGGGAATTG+AGG - chr1_1:77254591-77254610 Msa0045340:intron 60.0%
! CTATCATTGCTGACGGGCCG+GGG - chr1_1:77254671-77254690 Msa0045340:intron 60.0%
! TATCATTGCTGACGGGCCGG+GGG - chr1_1:77254672-77254691 Msa0045340:intron 60.0%
CATTGCGCCAAGATTCCCCC+CGG + chr1_1:77254691-77254710 None:intergenic 60.0%
GGGGGGAATCTTGGCGCAAT+GGG - chr1_1:77254690-77254709 Msa0045340:intron 60.0%
! TGTGTTGGCCTGTATCCGGC+AGG - chr1_1:77255170-77255189 Msa0045340:intron 60.0%
GAAGACCATGCTGGCGGTTC+TGG - chr1_1:77255228-77255247 Msa0045340:intron 60.0%
GAGTTCCAGAACCGCCAGCA+TGG + chr1_1:77255236-77255255 None:intergenic 60.0%
ACCCTCCTGTTCCGGGGAAG+GGG - chr1_1:77245514-77245533 Msa0045340:CDS 65.0%
GTCAAAGCGGAAACGCGGCG+TGG - chr1_1:77249459-77249478 Msa0045340:intron 65.0%
ATTGACGCGGCGCGGTAAGC+GGG - chr1_1:77249498-77249517 Msa0045340:CDS 65.0%
! ATCATTGCTGACGGGCCGGG+GGG - chr1_1:77254673-77254692 Msa0045340:intron 65.0%
CGGGGGGAATCTTGGCGCAA+TGG - chr1_1:77254689-77254708 Msa0045340:intron 65.0%
GCCCCTTCCCCGGAACAGGA+GGG + chr1_1:77245518-77245537 None:intergenic 70.0%
AGCCCCTTCCCCGGAACAGG+AGG + chr1_1:77245519-77245538 None:intergenic 70.0%
GGTAGCCCCTTCCCCGGAAC+AGG + chr1_1:77245522-77245541 None:intergenic 70.0%
ACGCGACCGAGTCGCGCGTT+AGG + chr1_1:77249904-77249923 None:intergenic 70.0%
CGGTCGCGTTCTGACGCGCT+AGG - chr1_1:77249915-77249934 Msa0045340:CDS 70.0%
GGTCTAACGCGGCGCGATCG+CGG + chr1_1:77249961-77249980 None:intergenic 70.0%
! TGACGGGCCGGGGGGAATCT+TGG - chr1_1:77254681-77254700 Msa0045340:intron 70.0%
AGCGGAAACGCGGCGTGGCG+CGG - chr1_1:77249464-77249483 Msa0045340:intron 75.0%
! CGCGGTAAGCGGGCGCGACG+CGG - chr1_1:77249508-77249527 Msa0045340:CDS 80.0%
! GCGGTAAGCGGGCGCGACGC+GGG - chr1_1:77249509-77249528 Msa0045340:CDS 80.0%
! AACGCGGCGCGATCGCGGCG+CGG + chr1_1:77249956-77249975 None:intergenic 80.0%
! GGCGCGATCGCGGCGCGGAG+CGG + chr1_1:77249951-77249970 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 77244945 77255865 77244945 ID=Msa0045340;Name=Msa0045340
chr1_1 mRNA 77244945 77255865 77244945 ID=Msa0045340-mRNA-1;Parent=Msa0045340;Name=Msa0045340-mRNA-1;_AED=0.06;_eAED=0.06;_QI=306|0.9|0.90|1|0.9|0.81|11|569|1002
chr1_1 exon 77244945 77245618 77244945 ID=Msa0045340-mRNA-1:exon:26356;Parent=Msa0045340-mRNA-1
chr1_1 exon 77246316 77246525 77246316 ID=Msa0045340-mRNA-1:exon:26355;Parent=Msa0045340-mRNA-1
chr1_1 exon 77246795 77247382 77246795 ID=Msa0045340-mRNA-1:exon:26354;Parent=Msa0045340-mRNA-1
chr1_1 exon 77248143 77248364 77248143 ID=Msa0045340-mRNA-1:exon:26353;Parent=Msa0045340-mRNA-1
chr1_1 exon 77248577 77248707 77248577 ID=Msa0045340-mRNA-1:exon:26352;Parent=Msa0045340-mRNA-1
chr1_1 exon 77249491 77250340 77249491 ID=Msa0045340-mRNA-1:exon:26351;Parent=Msa0045340-mRNA-1
chr1_1 exon 77250666 77250737 77250666 ID=Msa0045340-mRNA-1:exon:26350;Parent=Msa0045340-mRNA-1
chr1_1 exon 77252621 77253177 77252621 ID=Msa0045340-mRNA-1:exon:26349;Parent=Msa0045340-mRNA-1
chr1_1 exon 77253260 77253431 77253260 ID=Msa0045340-mRNA-1:exon:26348;Parent=Msa0045340-mRNA-1
chr1_1 exon 77253516 77253720 77253516 ID=Msa0045340-mRNA-1:exon:26347;Parent=Msa0045340-mRNA-1
chr1_1 exon 77255663 77255865 77255663 ID=Msa0045340-mRNA-1:exon:26346;Parent=Msa0045340-mRNA-1
chr1_1 five_prime_UTR 77255663 77255865 77255663 ID=Msa0045340-mRNA-1:five_prime_utr;Parent=Msa0045340-mRNA-1
chr1_1 five_prime_UTR 77253618 77253720 77253618 ID=Msa0045340-mRNA-1:five_prime_utr;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77253516 77253617 77253516 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77253260 77253431 77253260 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77252621 77253177 77252621 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77250666 77250737 77250666 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77249491 77250340 77249491 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77248577 77248707 77248577 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77248143 77248364 77248143 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77246795 77247382 77246795 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77246316 77246525 77246316 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 CDS 77245514 77245618 77245514 ID=Msa0045340-mRNA-1:cds;Parent=Msa0045340-mRNA-1
chr1_1 three_prime_UTR 77244945 77245513 77244945 ID=Msa0045340-mRNA-1:three_prime_utr;Parent=Msa0045340-mRNA-1
Gene Sequence

>Msa0045340

ATGCTTGATAATGTGGACAATATTATCGACTCAACTTGGAGACTATGTGCTCTTGTAGGTGGTTGGGTTTCTGGTTTAATTTCAAAACCTTACACAAAAGTGGTTGGCTCTGCATTTGATGGTTCTATTTCTAGGTTGGGCAACGAAAGGGAAAATAGTTATCTAGATTACATGGATCAGTGTATATATATTAGTTCGTCGGACGATGAGTTGGAGGTGATTGTAGATCCTGGGAGGATTCTTCCAAGATGGGCTGCTTCTGAAAGGAATTCAGATTCAAGAAGGGCAAAAAGTTCAAACGCGAGCTCGTCTAACGTTTTTAATCATTCACAAGTTAAGCCCAATAATCAACCTGGTCCGAGCAATGGAAGCACAAGTCAGCATCAGACAGTAAATTCCCGAATTTCTAATTCCAATGGTGCCGGTTATGAGAAAATGTCATCTCAACAAGCTTTTAACAGGACCCTTCCACCATCTTTTCAATCATCTGGTACAAGGGCTCTTCCACCTTCGTCATTTGCACCTAATAACAGATTAAATAACTTAAGCAGCAGTCAGCTGCATGATGCATACAAGAATCGTCATCATGGAGTAGGACCTAGCACATCTGGTGAGAAGGGCTTTTTTCGTGACAATTTTGGCAGAGGCAATGATGGAGATCGTTTCACGAATCAGAATGGTGGGATCAGGGCTCTTCCTCCATCTTTGATGCTTGGAAAGGCTATAACTCCACCGTTTGCTAGTTCTAGTGAATCTGCGTACCGTTCTGGAGCAGGTGATGAAAGGGCTCCTGAAACTGATGAGAGACTAATTTATGAAGCAGCATTACAGGATATCAGTCAACCATTAAAAGAAGCTGATTTACCTGCTGGTATAATGTCTGTACCTCTAATGAGACATCAGATAAAATGGAAAACAGATGATCCACGCAACCATAAAGCTGAAGCCTTGAATTTGGATGATGATGATGAGAATGGTAGTATTGATGTGGAAAAGGAAAAGCTTAAAAATGATGAAGAATCCAATGATGCAAAACCTATTACTGAACCGAGTAGTTCAACACAGGCCCCAGGTAGGAAAAGGCCAGCTGCTGGTACACTGGTTGTCTGCCCTGCAAGTGTTCTTCGGCAGTGGGCTAGAGAGCTTGATGAGAAAGTTGGAGATGAAAAGCTTTCTGTTTTGATTTTTCATGGGGGCAGTAGGACAAAGGATCCTGTTGAACTTGCAAAATATGATGTGGTTCTCACAACATACTCTCTTGTGACTAATGAAGTTCCCAAACAACCGTTAGTCGAGGAGGATGATATTGATGAAAAAGACGGGGAAAAGTTTGGCTTATCCTCCGATTTTTCTGGCAATAAAAAGAGGAAAAAGCTATATAATGGAAGTAAGAAGGGTAAAAAAGGTAGGAAGGGATTAGATGGCTCTTCTTTCGATTGCGGTGGCGCTCTTGCAAAAGTAGGTTGGTTTAGGGTTATTCTAGATGAAGCTCAAACGATAAAGAATCATAGGACTCAGATGGCCAGAGCTTGCTCCAGCCTTAGGGCAAAAAGAAGGTGGTGCTTGTCTGGCACGCCTATTCAGAATACCATTGATGATTTATATAGCTACTTTAGGTTCCTGAAGTATGATCCTTATGCTGTGTATAAATCATTCTACAATACAATAAAAGTCCCAATATCCAGAAATTCTATTCAAGGTTACAAAAAACTTCAAGCAGTTTTGAGGGCCATAATGCTACGTCGTACAAAAGGAACTTTGCTTGATGGCAAGCCTATAATCACTTTGCCTCCTAAAACAATTAATCTGGAGAAGGTTGATTTCTCCTATGAGGAGCGGGCCTTCTACAAGAAGTTGGAAGCTGATTCACGTTCTCAATTTAAGGCATATGCAGCTGCTGGCACAGTAAATCAAAACTACGCAAATATTCTTTTAATGCTTTTACGTCTCCGTCAGGCTTGTGATCACCCGCTTCTTGTTAAAGAATATAATTCTGATCCTGTTGGGAAAGATTCTGTTGAAATGGCAAAAAAGCTTCCAAAGGAGATGCTGATCAATCTGTTTAATAGTCTGGAAACAACTTCAGCTATATGCTGTGTCTGCAATGATCCACCTGATGACTCTGTTATTTCGATGTGTGGCCATGTCTTCTGTTATCAATGCGTGTCAGAACATTTGACAAGTGATGATAATATGTGCCCTGCAGTTCATTGTAAAGAACAACTTGGGGAAGATCTTGTTTTCTCCAAAGCAACTTTGAGGAGTTGCCTCTGTGACGATCTTGGTGGTAGTAGTTCTAGCAACTCGAGTCTTGTTGATTATTCCCTAGTACAGAACAGTGAGTACAGCTCATCTAAAATCAAAGCTGTCCTTGAGGTTCTGCAGTCAAGTTGTAAATTGAAGACTCCTGGCTTACTGAATACCCCCGAAGGCAATAGAGATTCACTGCCTTCTGATGATTCCGATATTGAAGATTTTGATTCAGATGTCAAGGTTACAAAACACACAAGTAAATATTCAGAGTGCACATCTGGAGGACCACTAAAGGCTATAATTTTTTCTCAGTGGACTAGCATGTTGGACTTGGTCGAGACATCAATGGAGCAATCTGGCGTCAAATACAGGAGACTTGATGGTAGGATGACTCTTACTGCGAGGGACAGAGCTGTTAAGGATTTCAATACTGATCCTGAGATTACTGTTATGCTGATGTCACTAAAAGCAGGAAACCTTGGTTTAAATATGGTTGCCGCATGTCATGTTATTCTTTTGGACCTTTGGTGGAATCCAACTACTGAAGATCAAGCTATTGATCGAGCTCATAGAATTGGACAGACTCGTCCTGTTACTGTGACACGGATCACCATAAAAGATACAGTTGAAGATAGAATATTGGCTCTACAGGAAGAAAAGAGAAAAATGGTGGCATCTGCATTTGGCGAAGACCATGCTGGCGGTTCTGGAACTCGGCTTACTGTTGATGATCTGAAATATCTTTTCATGGTTTAG
Protein sequence

>Msa0045340

MLDNVDNIIDSTWRLCALVGGWVSGLISKPYTKVVGSAFDGSISRLGNERENSYLDYMDQCIYISSSDDELEVIVDPGRILPRWAASERNSDSRRAKSSNASSSNVFNHSQVKPNNQPGPSNGSTSQHQTVNSRISNSNGAGYEKMSSQQAFNRTLPPSFQSSGTRALPPSSFAPNNRLNNLSSSQLHDAYKNRHHGVGPSTSGEKGFFRDNFGRGNDGDRFTNQNGGIRALPPSLMLGKAITPPFASSSESAYRSGAGDERAPETDERLIYEAALQDISQPLKEADLPAGIMSVPLMRHQIKWKTDDPRNHKAEALNLDDDDENGSIDVEKEKLKNDEESNDAKPITEPSSSTQAPGRKRPAAGTLVVCPASVLRQWARELDEKVGDEKLSVLIFHGGSRTKDPVELAKYDVVLTTYSLVTNEVPKQPLVEEDDIDEKDGEKFGLSSDFSGNKKRKKLYNGSKKGKKGRKGLDGSSFDCGGALAKVGWFRVILDEAQTIKNHRTQMARACSSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLLDGKPIITLPPKTINLEKVDFSYEERAFYKKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAICCVCNDPPDDSVISMCGHVFCYQCVSEHLTSDDNMCPAVHCKEQLGEDLVFSKATLRSCLCDDLGGSSSSNSSLVDYSLVQNSEYSSSKIKAVLEVLQSSCKLKTPGLLNTPEGNRDSLPSDDSDIEDFDSDVKVTKHTSKYSECTSGGPLKAIIFSQWTSMLDLVETSMEQSGVKYRRLDGRMTLTARDRAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDHAGGSGTRLTVDDLKYLFMV*