Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0173590 | XP_013469040.1 | 97.418 | 1123 | 25 | 2 | 1 | 1120 | 1 | 1122 | 0.0 | 2264 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0173590 | sp|Q6A332|ALY3_ARATH | 42.343 | 1195 | 551 | 27 | 1 | 1120 | 1 | 1132 | 0.0 | 781 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0173590 | A0A072VML3 | 97.418 | 1123 | 25 | 2 | 1 | 1120 | 1 | 1122 | 0.0 | 2264 |
Gene ID | Type | Classification |
---|---|---|
Msa0173590 | TF | MYB-related |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa0173590 | 0.845162 | 4.821981e-59 | -8.615850e-47 |
Msa0003270 | Msa0173590 | 0.822292 | 2.561286e-53 | -8.615850e-47 |
Msa0031180 | Msa0173590 | 0.823655 | 1.232550e-53 | -8.615850e-47 |
Msa0032900 | Msa0173590 | 0.995171 | 1.104167e-213 | -8.615850e-47 |
Msa0032940 | Msa0173590 | 0.994326 | 2.390909e-206 | -8.615850e-47 |
Msa0037120 | Msa0173590 | 0.811356 | 7.293834e-51 | -8.615850e-47 |
Msa0045340 | Msa0173590 | 0.815572 | 8.629629e-52 | -8.615850e-47 |
Msa0054820 | Msa0173590 | 0.822736 | 2.018941e-53 | -8.615850e-47 |
Msa0055600 | Msa0173590 | 0.832456 | 9.357908e-56 | -8.615850e-47 |
Msa0055660 | Msa0173590 | 0.820007 | 8.609179e-53 | -8.615850e-47 |
Msa0061040 | Msa0173590 | 0.815131 | 1.081906e-51 | -8.615850e-47 |
Msa0078480 | Msa0173590 | 0.822627 | 2.141007e-53 | -8.615850e-47 |
Msa0080050 | Msa0173590 | 0.986156 | 7.413414e-166 | -8.615850e-47 |
Msa0084340 | Msa0173590 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
Msa0092440 | Msa0173590 | 0.814221 | 1.720236e-51 | -8.615850e-47 |
Msa0096580 | Msa0173590 | 0.840568 | 8.040858e-58 | -8.615850e-47 |
Msa0100160 | Msa0173590 | 0.829767 | 4.281989e-55 | -8.615850e-47 |
Msa0131290 | Msa0173590 | 0.812093 | 5.042673e-51 | -8.615850e-47 |
Msa0144780 | Msa0173590 | 0.837507 | 4.989340e-57 | -8.615850e-47 |
Msa0173590 | Msa0177170 | 0.801471 | 8.866768e-49 | -8.615850e-47 |
Msa0173590 | Msa0183420 | 0.805345 | 1.396406e-49 | -8.615850e-47 |
Msa0173590 | Msa0202730 | 0.813283 | 2.768893e-51 | -8.615850e-47 |
Msa0173590 | Msa0205010 | 0.808430 | 3.108807e-50 | -8.615850e-47 |
Msa0173590 | Msa0205340 | 0.803151 | 3.997832e-49 | -8.615850e-47 |
Msa0173590 | Msa0227230 | 0.821597 | 3.710815e-53 | -8.615850e-47 |
Msa0173590 | Msa0237200 | 0.824172 | 9.320200e-54 | -8.615850e-47 |
Msa0173590 | Msa0269520 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
Msa0173590 | Msa0271790 | 0.819665 | 1.031013e-52 | -8.615850e-47 |
Msa0173590 | Msa0274970 | 0.833336 | 5.654407e-56 | -8.615850e-47 |
Msa0173590 | Msa0280150 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
Msa0173590 | Msa0290760 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
Msa0173590 | Msa0310430 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
Msa0173590 | Msa0310600 | 0.816289 | 5.970238e-52 | -8.615850e-47 |
Msa0173590 | Msa0310660 | 0.821837 | 3.264648e-53 | -8.615850e-47 |
Msa0173590 | Msa0315680 | 0.830612 | 2.662708e-55 | -8.615850e-47 |
Msa0173590 | Msa0341840 | 0.803598 | 3.229982e-49 | -8.615850e-47 |
Msa0173590 | Msa0376020 | 0.806170 | 9.369999e-50 | -8.615850e-47 |
Msa0173590 | Msa0377440 | 0.832820 | 7.601065e-56 | -8.615850e-47 |
Msa0173590 | Msa0378970 | 0.816089 | 6.618337e-52 | -8.615850e-47 |
Msa0173590 | Msa0390960 | 0.811710 | 6.110088e-51 | -8.615850e-47 |
Msa0173590 | Msa0392270 | 0.821837 | 3.264648e-53 | -8.615850e-47 |
Msa0173590 | Msa0415530 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
Msa0173590 | Msa0417650 | 0.844146 | 9.055216e-59 | -8.615850e-47 |
Msa0173590 | Msa0417730 | 0.819861 | 9.297706e-53 | -8.615850e-47 |
Msa0173590 | Msa0428050 | 0.808689 | 2.737867e-50 | -8.615850e-47 |
Msa0173590 | Msa0430060 | 0.841719 | 4.006651e-58 | -8.615850e-47 |
Msa0173590 | Msa0430150 | 0.836136 | 1.116819e-56 | -8.615850e-47 |
Msa0173590 | Msa0430950 | 0.800386 | 1.476944e-48 | -8.615850e-47 |
Msa0173590 | Msa0474390 | 0.804599 | 1.999425e-49 | -8.615850e-47 |
Msa0173590 | Msa0474940 | 0.810944 | 8.958805e-51 | -8.615850e-47 |
Msa0173590 | Msa0480780 | 0.822163 | 2.743235e-53 | -8.615850e-47 |
Msa0173590 | Msa0481030 | 0.826111 | 3.246062e-54 | -8.615850e-47 |
Msa0173590 | Msa0487720 | 0.804569 | 2.028668e-49 | -8.615850e-47 |
Msa0173590 | Msa0500470 | 0.821415 | 4.086552e-53 | -8.615850e-47 |
Msa0173590 | Msa0516020 | 0.805905 | 1.065082e-49 | -8.615850e-47 |
Msa0173590 | Msa0517650 | 0.823957 | 1.047067e-53 | -8.615850e-47 |
Msa0173590 | Msa0549280 | 0.824373 | 8.362988e-54 | -8.615850e-47 |
Msa0173590 | Msa0580640 | 0.814842 | 1.253726e-51 | -8.615850e-47 |
Msa0173590 | Msa0610670 | 0.801686 | 8.009518e-49 | -8.615850e-47 |
Msa0173590 | Msa0629430 | 0.820844 | 5.534899e-53 | -8.615850e-47 |
Msa0173590 | Msa0642250 | 0.821219 | 4.536093e-53 | -8.615850e-47 |
Msa0173590 | Msa0652690 | 0.824521 | 7.716050e-54 | -8.615850e-47 |
Msa0173590 | Msa0705390 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
Msa0173590 | Msa0763890 | 0.805915 | 1.059900e-49 | -8.615850e-47 |
Msa0173590 | Msa0763920 | 0.817575 | 3.070997e-52 | -8.615850e-47 |
Msa0173590 | Msa0800700 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
Msa0173590 | Msa0945240 | 0.821569 | 3.765409e-53 | -8.615850e-47 |
Msa0173590 | Msa0945510 | 0.985408 | 1.791140e-163 | -8.615850e-47 |
Msa0173590 | Msa0958030 | 0.839866 | 1.225984e-57 | -8.615850e-47 |
Msa0173590 | Msa0981310 | 0.814474 | 1.512297e-51 | -8.615850e-47 |
Msa0173590 | Msa0992580 | 0.818230 | 2.184538e-52 | -8.615850e-47 |
Msa0173590 | Msa0992600 | 0.804651 | 1.950429e-49 | -8.615850e-47 |
Msa0173590 | Msa1074010 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
Msa0173590 | Msa1077070 | 0.807031 | 6.164594e-50 | -8.615850e-47 |
Msa0173590 | Msa1080270 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
Msa0173590 | Msa1227320 | 0.835777 | 1.377097e-56 | -8.615850e-47 |
Msa0173590 | Msa1320820 | 0.813563 | 2.403098e-51 | -8.615850e-47 |
Msa0173590 | Msa1340130 | 0.817143 | 3.842449e-52 | -8.615850e-47 |
Msa0173590 | Msa1341490 | 0.812006 | 5.267495e-51 | -8.615850e-47 |
Msa0173590 | Msa1359560 | 0.840526 | 8.244796e-58 | -8.615850e-47 |
Msa0173590 | Msa1372290 | 0.817144 | 3.839205e-52 | -8.615850e-47 |
Msa0173590 | Msa1376130 | 0.804312 | 2.294911e-49 | -8.615850e-47 |
Msa0173590 | Msa1401460 | 0.816053 | 6.743825e-52 | -8.615850e-47 |
Msa0173590 | Msa1424780 | 0.822434 | 2.373289e-53 | -8.615850e-47 |
Msa0173590 | Msa1426570 | 0.802561 | 5.291378e-49 | -8.615850e-47 |
Msa0173590 | Msa1438520 | 0.815675 | 8.188165e-52 | -8.615850e-47 |
Msa0173590 | Msa1444400 | 0.815405 | 9.401308e-52 | -8.615850e-47 |
Msa0173590 | Msa1450720 | 0.811979 | 5.337865e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0173590 | MtrunA17_Chr1g0191931 | 97.418 | 1123 | 25 | 2 | 1 | 1120 | 1 | 1122 | 0.0 | 2264 |
Msa0173590 | MtrunA17_Chr4g0066971 | 43.647 | 1212 | 542 | 34 | 1 | 1120 | 1 | 1163 | 0.0 | 782 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0173590 | AT3G21430.4 | 42.628 | 1187 | 555 | 26 | 1 | 1120 | 1 | 1128 | 0.0 | 782 |
Msa0173590 | AT3G21430.3 | 42.628 | 1187 | 555 | 26 | 1 | 1120 | 1 | 1128 | 0.0 | 782 |
Msa0173590 | AT3G21430.2 | 42.343 | 1195 | 551 | 27 | 1 | 1120 | 1 | 1132 | 0.0 | 781 |
Msa0173590 | AT3G05380.4 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
Msa0173590 | AT3G05380.4 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
Msa0173590 | AT3G05380.2 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
Msa0173590 | AT3G05380.2 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
Msa0173590 | AT3G05380.5 | 46.659 | 913 | 395 | 24 | 1 | 852 | 1 | 882 | 0.0 | 663 |
Msa0173590 | AT3G05380.5 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 887 | 1052 | 2.39e-44 | 175 |
Msa0173590 | AT3G05380.1 | 46.440 | 913 | 396 | 25 | 1 | 852 | 1 | 881 | 0.0 | 662 |
Msa0173590 | AT3G05380.1 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 886 | 1051 | 2.38e-44 | 175 |
Msa0173590 | AT3G05380.3 | 44.538 | 833 | 373 | 22 | 80 | 852 | 1 | 804 | 0.0 | 573 |
Msa0173590 | AT3G05380.3 | 53.179 | 173 | 73 | 4 | 949 | 1120 | 809 | 974 | 1.63e-44 | 176 |
Msa0173590 | AT5G27610.1 | 44.114 | 807 | 318 | 25 | 1 | 770 | 1 | 711 | 5.06e-174 | 537 |
Msa0173590 | AT5G27610.1 | 43.011 | 186 | 99 | 3 | 935 | 1120 | 792 | 970 | 1.04e-31 | 134 |
Find 277 sgRNAs with CRISPR-Local
Find 804 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATGAATCTCTCTTGTTT+TGG | 0.149228 | 1_4:+58913092 | None:intergenic |
TAGCTGTTTGTCATCTTATT+TGG | 0.158728 | 1_4:-58913553 | Msa0173590:CDS |
GAAGAAGTTGTCTAATAAAT+TGG | 0.161696 | 1_4:-58918750 | Msa0173590:CDS |
GATTAATAACGGCAATATTA+AGG | 0.164204 | 1_4:-58909421 | Msa0173590:three_prime_UTR |
CGTTATTAATCAACAGCTTT+TGG | 0.191177 | 1_4:+58909433 | None:intergenic |
ATTAATGGAAATTCAAGTTT+TGG | 0.224585 | 1_4:-58912370 | Msa0173590:CDS |
CGTCTACTTCTTTGTTTAGT+TGG | 0.235444 | 1_4:+58913784 | None:intergenic |
TTCTTTGAAGGAAAATAATA+TGG | 0.244666 | 1_4:-58916231 | Msa0173590:CDS |
TTAAACATTCTATGCCATTT+TGG | 0.249911 | 1_4:+58911035 | None:intergenic |
AGAGAGAGAAAGAGAGAGAT+AGG | 0.252798 | 1_4:+58920879 | None:intergenic |
ATTTGAATTTCTCTGTAAAT+AGG | 0.271279 | 1_4:+58909642 | None:intergenic |
AGCACAGAGGTTACCAATAT+TGG | 0.278915 | 1_4:+58911466 | None:intergenic |
GTACTCCACAAATTCTCTTT+TGG | 0.279992 | 1_4:+58913473 | None:intergenic |
AGTATAGAACCACATATTAA+TGG | 0.291083 | 1_4:-58912385 | Msa0173590:CDS |
TTCGAGTATCGCACGGTTGC+AGG | 0.302283 | 1_4:+58909670 | None:intergenic |
CCTATGTGATACAAACTAAA+TGG | 0.302689 | 1_4:+58909523 | None:intergenic |
TGATGAATTCAACTCCTAAC+TGG | 0.311762 | 1_4:+58913016 | None:intergenic |
TTGACCGTCTTTATTTGTTT+TGG | 0.312836 | 1_4:+58913892 | None:intergenic |
AAAGCGTGCTCTAGATAAAA+AGG | 0.313137 | 1_4:-58911366 | Msa0173590:intron |
TTGGAGGTAATTCTGTCAAT+AGG | 0.317043 | 1_4:-58916139 | Msa0173590:CDS |
GTCACTTCCCAGGCCAATAT+TGG | 0.328742 | 1_4:-58911479 | Msa0173590:CDS |
TCAGAATCTTTGTGCAGTTT+CGG | 0.329467 | 1_4:+58910113 | None:intergenic |
TGTCTAGGAAGGGTGCATTT+AGG | 0.329734 | 1_4:-58909206 | Msa0173590:three_prime_UTR |
AATGCTGGATGCTGCATTTC+AGG | 0.332422 | 1_4:-58910668 | Msa0173590:intron |
TACTAGTTCCTTGATGGATA+TGG | 0.336948 | 1_4:-58916390 | Msa0173590:CDS |
TAGAGATACTAGTTCCTTGA+TGG | 0.342926 | 1_4:-58916396 | Msa0173590:CDS |
TTGAGTGGAGTGTCATAAAA+AGG | 0.349014 | 1_4:-58913407 | Msa0173590:intron |
ATTAATAACGGCAATATTAA+GGG | 0.350075 | 1_4:-58909420 | Msa0173590:three_prime_UTR |
GGCATATTGGAAAACCAAAA+TGG | 0.350448 | 1_4:-58911049 | Msa0173590:CDS |
AAAGATGCTATTACGAAGAT+TGG | 0.351072 | 1_4:-58910287 | Msa0173590:CDS |
TCTGTCAATAGGGATGTCTT+TGG | 0.351786 | 1_4:-58916128 | Msa0173590:CDS |
ATGGCCATCAAAATTTGCTT+TGG | 0.355548 | 1_4:+58910786 | None:intergenic |
AGCCTCGTGCTGTTGGAAAA+AGG | 0.356186 | 1_4:-58916921 | Msa0173590:CDS |
TTCCATTTGCTGATAAGATA+TGG | 0.360437 | 1_4:-58914851 | Msa0173590:CDS |
TAGAGAGAGGCAACCATCAC+TGG | 0.361044 | 1_4:+58917600 | None:intergenic |
CACGAGCTGTCTCTGACATT+TGG | 0.361609 | 1_4:+58916501 | None:intergenic |
AGATGGACTTCCAACAGATT+TGG | 0.362036 | 1_4:-58913157 | Msa0173590:CDS |
AAGAAAATTTCACGAATTGA+TGG | 0.368949 | 1_4:+58909285 | None:intergenic |
GGCTACATTAACCATGATTC+AGG | 0.369905 | 1_4:-58910045 | Msa0173590:intron |
CTTGGATGCTTTGCAAACTT+TGG | 0.371982 | 1_4:-58915960 | Msa0173590:CDS |
AGCTCCTATTCAGTAGCTCT+TGG | 0.373329 | 1_4:+58909387 | None:intergenic |
ACTCTCAAAAGAAAGATGAT+AGG | 0.373372 | 1_4:-58916876 | Msa0173590:CDS |
ACTGTCATTGAAATCATTAA+AGG | 0.374232 | 1_4:-58910712 | Msa0173590:CDS |
GAAAGCAGGGGAGCTGAAAA+TGG | 0.374259 | 1_4:-58916428 | Msa0173590:CDS |
GCTTCGGGCATATTATCTAA+TGG | 0.375299 | 1_4:+58912448 | None:intergenic |
ATCTGCCTCCTCAAAGCTTC+GGG | 0.377312 | 1_4:+58912433 | None:intergenic |
TAGGGATGAGAGCTAAAATC+TGG | 0.378728 | 1_4:+58909598 | None:intergenic |
TCATTCTTTCTCCCTTCAAC+TGG | 0.380375 | 1_4:+58915036 | None:intergenic |
ATGGCTTGTTGATGTTGATT+CGG | 0.382537 | 1_4:+58914983 | None:intergenic |
CGCGGAATCACTTTCACTCT+TGG | 0.385290 | 1_4:-58920786 | Msa0173590:five_prime_UTR |
GAGGGGACAGCTTCTGTTGT+AGG | 0.386769 | 1_4:-58918155 | Msa0173590:CDS |
GAGCTTCGAAATGCTAATAA+TGG | 0.388504 | 1_4:-58911070 | Msa0173590:CDS |
AAATGCTAATAATGGCATAT+TGG | 0.389348 | 1_4:-58911062 | Msa0173590:CDS |
CTGAAGAAAAGACGCATTGA+TGG | 0.393599 | 1_4:-58917577 | Msa0173590:intron |
TGGCCATCAAAATTTGCTTT+GGG | 0.396560 | 1_4:+58910787 | None:intergenic |
CCGCGGCTGTTACTGATTGT+AGG | 0.401511 | 1_4:+58920804 | None:intergenic |
AGCTTGAAGTCTACTGTTGA+TGG | 0.408517 | 1_4:-58916826 | Msa0173590:CDS |
CAGTTCGATCGTCCCCAGTT+AGG | 0.409738 | 1_4:-58913030 | Msa0173590:CDS |
GTCTTTAATTACCTGAATCA+TGG | 0.409754 | 1_4:+58910034 | None:intergenic |
TGGCTTGTTGATGTTGATTC+GGG | 0.410687 | 1_4:+58914984 | None:intergenic |
ACACTTCTAGATTTCCTTGT+CGG | 0.411329 | 1_4:+58919523 | None:intergenic |
GAGAAGATATAATTCTAAGT+AGG | 0.419321 | 1_4:+58909579 | None:intergenic |
TGGAGGTAATTCTGTCAATA+GGG | 0.420535 | 1_4:-58916138 | Msa0173590:CDS |
AATCTGCCTCCTCAAAGCTT+CGG | 0.421550 | 1_4:+58912432 | None:intergenic |
TTCCATATCTTATCAGCAAA+TGG | 0.431294 | 1_4:+58914849 | None:intergenic |
TACGAAGATTGGGCAGGCAT+TGG | 0.432224 | 1_4:-58910276 | Msa0173590:CDS |
ACACGTTGTCCAACATATAA+TGG | 0.433131 | 1_4:+58913129 | None:intergenic |
GAGGCAACGCAATACCTATA+CGG | 0.433200 | 1_4:-58910836 | Msa0173590:CDS |
AAGAGCTTCCACCATTTCAA+TGG | 0.436695 | 1_4:+58918465 | None:intergenic |
AAGAAGTTGTCTAATAAATT+GGG | 0.437836 | 1_4:-58918749 | Msa0173590:CDS |
GCCGCGAAACTTGAATATAA+AGG | 0.440993 | 1_4:+58920922 | None:intergenic |
CATGAAGTGATGAGCTCAAA+TGG | 0.441310 | 1_4:+58910071 | None:intergenic |
CCGTCTTCTGAAGTAGAATC+TGG | 0.447167 | 1_4:-58915917 | Msa0173590:intron |
AAGCTCTTTACAATATGAAT+CGG | 0.447230 | 1_4:-58918450 | Msa0173590:CDS |
ACAGAAAGCATGGTAAAGAT+TGG | 0.448397 | 1_4:-58918682 | Msa0173590:CDS |
GAGCCAGCTCCATCTTTCTC+AGG | 0.448770 | 1_4:+58919466 | None:intergenic |
CTTGAATTTCCATTAATATG+TGG | 0.449653 | 1_4:+58912376 | None:intergenic |
ACTTGTTTCTGCAGTTCCCT+TGG | 0.450351 | 1_4:-58913288 | Msa0173590:intron |
CTGATACCATGCTTCAATTG+AGG | 0.455978 | 1_4:-58910855 | Msa0173590:CDS |
CACTCAACACGAGTTAGCCT+TGG | 0.457331 | 1_4:+58913423 | None:intergenic |
CATTGCATGTGCCTGTAGCC+TGG | 0.458879 | 1_4:+58910687 | None:intergenic |
GTTTGCCAAAAGAGAATTTG+TGG | 0.458990 | 1_4:-58913478 | Msa0173590:CDS |
AATATCTGAGCCACATCAGC+TGG | 0.464887 | 1_4:+58909711 | None:intergenic |
CACAGAAGCATCGAGAAACT+TGG | 0.464933 | 1_4:+58916478 | None:intergenic |
AGAAGATATAATTCTAAGTA+GGG | 0.465953 | 1_4:+58909580 | None:intergenic |
AAAGAAAGAGTGGAAAATGT+TGG | 0.469922 | 1_4:-58916317 | Msa0173590:CDS |
TGCTCAGAGCCGGGATAGAA+TGG | 0.470304 | 1_4:-58916689 | Msa0173590:intron |
TGGAAGGTAGTCTTGAAAGC+AGG | 0.470580 | 1_4:-58916442 | Msa0173590:CDS |
TGATGACATTATTAATGTCT+AGG | 0.471983 | 1_4:-58909221 | Msa0173590:three_prime_UTR |
AGAATCACGTCTCCAGTTGA+AGG | 0.473764 | 1_4:-58915048 | Msa0173590:CDS |
TTTCTCGATGCTTCTGTGGA+TGG | 0.475165 | 1_4:-58916473 | Msa0173590:CDS |
TATCACAGGCAACCTGTACT+TGG | 0.476810 | 1_4:+58910226 | None:intergenic |
AGTTCTCTCCTGCTCAGAGC+CGG | 0.477289 | 1_4:-58916699 | Msa0173590:CDS |
ATGGAAGGAACGAGCACTGC+TGG | 0.477901 | 1_4:-58916371 | Msa0173590:CDS |
GACTATGCAGCTCTTTAGAA+AGG | 0.478944 | 1_4:+58909251 | None:intergenic |
TGGAAGTAACAGACTGAGAC+TGG | 0.479884 | 1_4:+58917620 | None:intergenic |
GATATTTCTCCTGAGAAAGA+TGG | 0.480654 | 1_4:-58919475 | Msa0173590:CDS |
GAATCCAAGAGCTACTGAAT+AGG | 0.481206 | 1_4:-58909391 | Msa0173590:three_prime_UTR |
ATAATATGCCCGAAGCTTTG+AGG | 0.481922 | 1_4:-58912441 | Msa0173590:CDS |
GAGCACTGCTGGAGTTCCTA+AGG | 0.483645 | 1_4:-58916360 | Msa0173590:CDS |
CATTAAAGGATCCAGGCTAC+AGG | 0.484028 | 1_4:-58910698 | Msa0173590:CDS |
CAAAAGCTGTTGATTAATAA+CGG | 0.484703 | 1_4:-58909432 | Msa0173590:three_prime_UTR |
ATTCTATCCCGGCTCTGAGC+AGG | 0.485679 | 1_4:+58916691 | None:intergenic |
TGGCAGAGAGGTTTCCGTAT+AGG | 0.486136 | 1_4:+58910822 | None:intergenic |
GCTACAGGCACATGCAATGC+TGG | 0.487202 | 1_4:-58910683 | Msa0173590:CDS |
ACCTTTATATTCAAGTTTCG+CGG | 0.487436 | 1_4:-58920923 | Msa0173590:five_prime_UTR |
TTGAAATCATTAAAGGATCC+AGG | 0.488460 | 1_4:-58910705 | Msa0173590:CDS |
AATGGTCTTGCCAAATCTGT+TGG | 0.489638 | 1_4:+58913147 | None:intergenic |
CCTTTACTTAACGATGCATC+TGG | 0.490660 | 1_4:-58910137 | Msa0173590:CDS |
TTGGGATCTCAGTGGAGCAA+GGG | 0.491437 | 1_4:-58918731 | Msa0173590:CDS |
GCATGCAGCGGCACTGAAGA+AGG | 0.491447 | 1_4:-58916266 | Msa0173590:CDS |
AGAGGTTACCAATATTGGCC+TGG | 0.491630 | 1_4:+58911471 | None:intergenic |
CATCTTATTTGGTTCGCAGA+TGG | 0.495359 | 1_4:-58913542 | Msa0173590:CDS |
GGAGAGAGAAAACAAGAGAA+AGG | 0.497037 | 1_4:+58920846 | None:intergenic |
AACAGATGAAATCCACGCCT+TGG | 0.497756 | 1_4:-58915978 | Msa0173590:intron |
GCACGGTTGCAGGCTGGTAA+CGG | 0.498043 | 1_4:+58909680 | None:intergenic |
CAGAGAAATTCAAATGTGCA+TGG | 0.498649 | 1_4:-58909634 | Msa0173590:CDS |
GGTCTGCAGCCTCGTGCTGT+TGG | 0.500748 | 1_4:-58916928 | Msa0173590:CDS |
ACGTAATAGATCCATTGAAA+TGG | 0.501185 | 1_4:-58918476 | Msa0173590:CDS |
TCAGTATACTAAAGGATCAA+TGG | 0.502629 | 1_4:-58919548 | Msa0173590:intron |
GAACTAACTTCACTTAAAAG+TGG | 0.502840 | 1_4:+58913808 | None:intergenic |
GAGAGAGAAAGAGAGAGATA+GGG | 0.504017 | 1_4:+58920880 | None:intergenic |
TAATAAGCACTCTACCCAAA+AGG | 0.509532 | 1_4:-58913692 | Msa0173590:intron |
GACATTATTAATGTCTAGGA+AGG | 0.510569 | 1_4:-58909217 | Msa0173590:three_prime_UTR |
CAGTCTGTTACTTCCAGTGA+TGG | 0.510709 | 1_4:-58917613 | Msa0173590:CDS |
GACAGATCATTATAATGTCC+TGG | 0.510737 | 1_4:-58918117 | Msa0173590:intron |
GTCAATAGGGATGTCTTTGG+AGG | 0.511224 | 1_4:-58916125 | Msa0173590:intron |
AGTACAGGTTGCCTGTGATA+AGG | 0.511473 | 1_4:-58910223 | Msa0173590:CDS |
CTCTCAAAAGAAAGATGATA+GGG | 0.511587 | 1_4:-58916875 | Msa0173590:CDS |
GAAGAGGGGCGTACCTTCAC+AGG | 0.513156 | 1_4:+58912325 | None:intergenic |
AAGATGCTATTACGAAGATT+GGG | 0.513873 | 1_4:-58910286 | Msa0173590:CDS |
TTTGCTTTGGGCTTCATCCA+TGG | 0.515055 | 1_4:+58910799 | None:intergenic |
GCTAAAGGAAGCCAGTGGAC+AGG | 0.515599 | 1_4:-58910966 | Msa0173590:intron |
TGGTTCTATACTCGTAAAAG+AGG | 0.516423 | 1_4:+58912396 | None:intergenic |
TCTATCTACCCTTTGTGTGA+AGG | 0.516911 | 1_4:-58909349 | Msa0173590:three_prime_UTR |
GTTCTCTCCTGCTCAGAGCC+GGG | 0.518889 | 1_4:-58916698 | Msa0173590:CDS |
CACGGTACTTGTAGAGCTAA+AGG | 0.519139 | 1_4:-58910981 | Msa0173590:CDS |
TACTTAAATCATGTTGGACT+AGG | 0.519442 | 1_4:-58913453 | Msa0173590:CDS |
AGGAAGAGAGTGATAGTGAA+AGG | 0.519581 | 1_4:-58917726 | Msa0173590:CDS |
CATTATTCTGAGCTGCGGAC+TGG | 0.520480 | 1_4:-58913186 | Msa0173590:CDS |
AGCTCTTTACAATATGAATC+GGG | 0.520904 | 1_4:-58918449 | Msa0173590:intron |
ATAGAACTATCCGACATACT+AGG | 0.521403 | 1_4:+58910754 | None:intergenic |
GGAAGAGAGTGATAGTGAAA+GGG | 0.522040 | 1_4:-58917725 | Msa0173590:CDS |
TTACAGAAAGAAAGAAAGAG+TGG | 0.522065 | 1_4:-58916327 | Msa0173590:CDS |
GTGGAGTACTTAAATCATGT+TGG | 0.522193 | 1_4:-58913459 | Msa0173590:CDS |
TTCTGTTCTCCTCTCCTATG+TGG | 0.525089 | 1_4:+58916721 | None:intergenic |
ACAAAGGGTAGATAGATAAC+CGG | 0.526358 | 1_4:+58909356 | None:intergenic |
CAAAGTTTGCAAAGCATCCA+AGG | 0.526548 | 1_4:+58915961 | None:intergenic |
GGAAATTATCAGCTTGATGA+CGG | 0.526857 | 1_4:-58916296 | Msa0173590:CDS |
GAAGCCACATGCCTGTCCAC+TGG | 0.527209 | 1_4:+58910955 | None:intergenic |
ATATTATCTAATGGATTCAA+AGG | 0.530582 | 1_4:+58912457 | None:intergenic |
GCAAAAGTCCACTGTGTCAA+AGG | 0.530832 | 1_4:-58914820 | Msa0173590:intron |
GATGAATTCAACTCCTAACT+GGG | 0.531998 | 1_4:+58913017 | None:intergenic |
TTGGCAAGACCATTATATGT+TGG | 0.532186 | 1_4:-58913138 | Msa0173590:CDS |
ATGTGGTGTCTGAGAAACTA+GGG | 0.533355 | 1_4:+58916738 | None:intergenic |
ACAACAGAAGCTGTCCCCTC+TGG | 0.533993 | 1_4:+58918158 | None:intergenic |
GACTTCTCTTTACGCATGGA+TGG | 0.534395 | 1_4:+58913742 | None:intergenic |
ATAAGACTTCTCTTTACGCA+TGG | 0.535515 | 1_4:+58913738 | None:intergenic |
CACAGGCAACCTGTACTTGG+TGG | 0.535612 | 1_4:+58910229 | None:intergenic |
ATAGTGCACTTGATTATCCA+TGG | 0.536074 | 1_4:-58913500 | Msa0173590:CDS |
ACTGAATTCTGCACTTGTCA+TGG | 0.538319 | 1_4:+58913049 | None:intergenic |
CGGCATCATTAGAGATAGAT+CGG | 0.538917 | 1_4:+58915937 | None:intergenic |
GGAAGGTAGTCTTGAAAGCA+GGG | 0.541939 | 1_4:-58916441 | Msa0173590:CDS |
ACTCAACACGAGTTAGCCTT+GGG | 0.542670 | 1_4:+58913424 | None:intergenic |
AGCAGTTGTCCACCAAGTAC+AGG | 0.544298 | 1_4:-58910238 | Msa0173590:CDS |
TGCTAACCATGTCACTTCCC+AGG | 0.548811 | 1_4:-58911489 | Msa0173590:CDS |
CTGCGGACTGGTATAAGAGA+TGG | 0.549190 | 1_4:-58913174 | Msa0173590:CDS |
TTGTAGGTTAAATCGATTCA+CGG | 0.552596 | 1_4:+58920820 | None:intergenic |
GAGAGAGAAAACAAGAGAAA+GGG | 0.553322 | 1_4:+58920847 | None:intergenic |
AGGTCTCAAGATCAAGTGAA+TGG | 0.554399 | 1_4:-58910203 | Msa0173590:CDS |
CGTTCCTTCCATATCCATCA+AGG | 0.554433 | 1_4:+58916382 | None:intergenic |
TATGTGGTGTCTGAGAAACT+AGG | 0.554615 | 1_4:+58916737 | None:intergenic |
CCAGATGCATCGTTAAGTAA+AGG | 0.554967 | 1_4:+58910137 | None:intergenic |
AAAACCTGCGTGGTTTGCCA+AGG | 0.555120 | 1_4:+58913271 | None:intergenic |
GAAGCTTTGAGGAGGCAGAT+TGG | 0.556916 | 1_4:-58912430 | Msa0173590:CDS |
GAATTTCTCTGTAAATAGGA+AGG | 0.557537 | 1_4:+58909646 | None:intergenic |
AAAATTACAGATTAAGTAAG+GGG | 0.558954 | 1_4:+58909491 | None:intergenic |
AAGAGCTACTGAATAGGAGC+TGG | 0.562419 | 1_4:-58909385 | Msa0173590:three_prime_UTR |
TGCTATTACGAAGATTGGGC+AGG | 0.562780 | 1_4:-58910282 | Msa0173590:CDS |
GTTCTATGACACAAGAGTCT+AGG | 0.563001 | 1_4:-58910738 | Msa0173590:CDS |
CCATTTAGTTTGTATCACAT+AGG | 0.564439 | 1_4:-58909523 | Msa0173590:three_prime_UTR |
ACTTCAGCTTAATGTCTCAA+AGG | 0.565165 | 1_4:-58917650 | Msa0173590:CDS |
TTATGTAGCCTTCACACAAA+GGG | 0.567098 | 1_4:+58909341 | None:intergenic |
ACATACTAGGAAGGTCATCA+TGG | 0.567760 | 1_4:+58910767 | None:intergenic |
TTTGCAAAGCATCCAAGGCG+TGG | 0.570904 | 1_4:+58915966 | None:intergenic |
GAGGTTACCAATATTGGCCT+GGG | 0.571947 | 1_4:+58911472 | None:intergenic |
TTTGAAGGAAAATAATATGG+AGG | 0.574084 | 1_4:-58916228 | Msa0173590:CDS |
GCAATACCCTCCAGCTGATG+TGG | 0.575728 | 1_4:-58909721 | Msa0173590:CDS |
AGTATCGCACGGTTGCAGGC+TGG | 0.577322 | 1_4:+58909674 | None:intergenic |
AGGGAGAGCAATGATGCACC+AGG | 0.581666 | 1_4:-58917706 | Msa0173590:CDS |
AAAGACGGTCAAACCTTCTG+AGG | 0.581676 | 1_4:-58913881 | Msa0173590:CDS |
TGGGATCTCAGTGGAGCAAG+GGG | 0.581686 | 1_4:-58918730 | Msa0173590:CDS |
CACTTTACACGGTTGAGCAG+AGG | 0.582929 | 1_4:+58911436 | None:intergenic |
GAATGTTTAAAAGATTCTGA+AGG | 0.583011 | 1_4:-58911022 | Msa0173590:CDS |
ATTGGGATCTCAGTGGAGCA+AGG | 0.585319 | 1_4:-58918732 | Msa0173590:CDS |
CCAGATTCTACTTCAGAAGA+CGG | 0.586286 | 1_4:+58915917 | None:intergenic |
TGGTCTCAAGCTACAAAGGA+AGG | 0.586757 | 1_4:-58910311 | Msa0173590:CDS |
GTTCCCTTGGCAAACCACGC+AGG | 0.587364 | 1_4:-58913275 | Msa0173590:CDS |
AGAGAAATTCAAATGTGCAT+GGG | 0.587897 | 1_4:-58909633 | Msa0173590:CDS |
ACTTAAATCATGTTGGACTA+GGG | 0.588058 | 1_4:-58913452 | Msa0173590:CDS |
TATGAAGCATACAGAAAGCA+TGG | 0.589048 | 1_4:-58918692 | Msa0173590:CDS |
TGATGTTGCATCACTTTACA+CGG | 0.589402 | 1_4:+58911425 | None:intergenic |
GTAACAGACTGAGACTGGAC+AGG | 0.589416 | 1_4:+58917625 | None:intergenic |
CAAGGCTAACTCGTGTTGAG+TGG | 0.590048 | 1_4:-58913422 | Msa0173590:CDS |
TATTGGCCTGGGAAGTGACA+TGG | 0.591157 | 1_4:+58911483 | None:intergenic |
TAATAGATCCATTGAAATGG+TGG | 0.592802 | 1_4:-58918473 | Msa0173590:CDS |
GAATAGGAGCTGGCACATAC+CGG | 0.594291 | 1_4:-58909375 | Msa0173590:three_prime_UTR |
GCACGCAGTAAAACCTCAGA+AGG | 0.597284 | 1_4:+58913868 | None:intergenic |
CATTAATAATGTCATCAAAG+AGG | 0.597905 | 1_4:+58909227 | None:intergenic |
AAAACAAGAGAGATTCATGA+TGG | 0.598180 | 1_4:-58913090 | Msa0173590:CDS |
TCTCCTGAGAAAGATGGAGC+TGG | 0.598280 | 1_4:-58919469 | Msa0173590:CDS |
TGATCTTGAGACCTTATCAC+AGG | 0.600930 | 1_4:+58910212 | None:intergenic |
GCATGGTAAAGATTGGAAGA+AGG | 0.602065 | 1_4:-58918675 | Msa0173590:intron |
CTTCATCCATGGTGGCAGAG+AGG | 0.603440 | 1_4:+58910810 | None:intergenic |
ATCTGAGCCACATCAGCTGG+AGG | 0.605296 | 1_4:+58909714 | None:intergenic |
AAACCTGCGTGGTTTGCCAA+GGG | 0.605604 | 1_4:+58913272 | None:intergenic |
AGGGATGAGAGCTAAAATCT+GGG | 0.606466 | 1_4:+58909599 | None:intergenic |
CAAGTTTCTCGATGCTTCTG+TGG | 0.606617 | 1_4:-58916477 | Msa0173590:CDS |
GGCATGGTCTCAAGCTACAA+AGG | 0.609766 | 1_4:-58910315 | Msa0173590:CDS |
CGGAAACCTCTCTGCCACCA+TGG | 0.610537 | 1_4:-58910816 | Msa0173590:CDS |
AATCAACATCAACAAGCCAT+AGG | 0.617002 | 1_4:-58914980 | Msa0173590:CDS |
GCGTTGCCTCAATTGAAGCA+TGG | 0.617652 | 1_4:+58910849 | None:intergenic |
GAATCACGTCTCCAGTTGAA+GGG | 0.618260 | 1_4:-58915047 | Msa0173590:CDS |
AATCTAGAAGTGTGAATAAG+CGG | 0.619158 | 1_4:-58919513 | Msa0173590:CDS |
TACAGATTAAGTAAGGGGCA+AGG | 0.619550 | 1_4:+58909496 | None:intergenic |
GCATATCTATCTCTACCAGA+GGG | 0.620511 | 1_4:-58918173 | Msa0173590:CDS |
ATTATGTAGCCTTCACACAA+AGG | 0.620809 | 1_4:+58909340 | None:intergenic |
AGTTGAATACCATTCTATCC+CGG | 0.621666 | 1_4:+58916680 | None:intergenic |
AGCACTGCTGGAGTTCCTAA+GGG | 0.622103 | 1_4:-58916359 | Msa0173590:CDS |
TTACTGCGTGCTGATCAGAA+AGG | 0.622646 | 1_4:-58913856 | Msa0173590:CDS |
ACTTGCAGAGTTGTACTGAA+CGG | 0.624851 | 1_4:-58909743 | Msa0173590:intron |
TGACAGAATTACCTCCAAAG+AGG | 0.625229 | 1_4:+58916144 | None:intergenic |
GGCATATCTATCTCTACCAG+AGG | 0.628948 | 1_4:-58918174 | Msa0173590:CDS |
GGTTAAATCGATTCACGGCG+AGG | 0.629367 | 1_4:+58920825 | None:intergenic |
TGATGACCTTCCTAGTATGT+CGG | 0.630040 | 1_4:-58910764 | Msa0173590:CDS |
TGAGCTCATCACTTCATGTG+TGG | 0.634529 | 1_4:-58910066 | Msa0173590:CDS |
GTTGAAGGGAGAAAGAATGA+TGG | 0.638179 | 1_4:-58915033 | Msa0173590:CDS |
CAAGAGTGAAAGTGATTCCG+CGG | 0.644840 | 1_4:+58920787 | None:intergenic |
TCTGAGCCACATCAGCTGGA+GGG | 0.645393 | 1_4:+58909715 | None:intergenic |
TTTCAAGAAGCATTATGCCA+CGG | 0.645708 | 1_4:-58910999 | Msa0173590:CDS |
AACTATCCGACATACTAGGA+AGG | 0.646168 | 1_4:+58910758 | None:intergenic |
GCTTTGGGCTTCATCCATGG+TGG | 0.646183 | 1_4:+58910802 | None:intergenic |
AAGGATCAATGGCACCGACA+AGG | 0.648478 | 1_4:-58919537 | Msa0173590:exon |
TTAAGCAGGGCTTCACAAAG+AGG | 0.648843 | 1_4:-58916769 | Msa0173590:CDS |
GGAAGGTTTCGAGTATCGCA+CGG | 0.648915 | 1_4:+58909663 | None:intergenic |
GACGGAGGAGAAGCATGCAG+CGG | 0.650843 | 1_4:-58916278 | Msa0173590:CDS |
AGTTCCTTGATGGATATGGA+AGG | 0.652302 | 1_4:-58916386 | Msa0173590:CDS |
AGCAGGGCTTCACAAAGAGG+AGG | 0.653229 | 1_4:-58916766 | Msa0173590:CDS |
GTTAGGAGTTGAATTCATCA+CGG | 0.655789 | 1_4:-58913013 | Msa0173590:intron |
CTCACCAAAACAAATAAAGA+CGG | 0.659655 | 1_4:-58913896 | Msa0173590:CDS |
TTGGACTAGGGAATATCCCA+AGG | 0.661354 | 1_4:-58913440 | Msa0173590:CDS |
AATTATCAGCTTGATGACGG+AGG | 0.663340 | 1_4:-58916293 | Msa0173590:CDS |
TATACTTGCCTTTGACACAG+TGG | 0.663441 | 1_4:+58914812 | None:intergenic |
AATTCTCCCCAACAAGTCAG+CGG | 0.664103 | 1_4:-58916184 | Msa0173590:CDS |
CTAATAAATTGGGATCTCAG+TGG | 0.665494 | 1_4:-58918739 | Msa0173590:CDS |
AATGCATGCTTCACCTGTGA+AGG | 0.667655 | 1_4:-58912338 | Msa0173590:intron |
TAGTTTCTCAGACACCACAT+AGG | 0.669340 | 1_4:-58916735 | Msa0173590:CDS |
ACATTATTAATGTCTAGGAA+GGG | 0.673447 | 1_4:-58909216 | Msa0173590:three_prime_UTR |
AATGGATCTATTACGTACAG+CGG | 0.676588 | 1_4:+58918483 | None:intergenic |
CTTTAGCTCTACAAGTACCG+TGG | 0.680662 | 1_4:+58910982 | None:intergenic |
CAGAGGCAGCTTGAGCACAG+AGG | 0.682588 | 1_4:+58911453 | None:intergenic |
TCTCAGACACCACATAGGAG+AGG | 0.683376 | 1_4:-58916730 | Msa0173590:CDS |
GAGTGGTAAACTGGGACTCG+TGG | 0.685072 | 1_4:+58916895 | None:intergenic |
ACTGCTGGAGTTCCTAAGGG+AGG | 0.691043 | 1_4:-58916356 | Msa0173590:CDS |
GAAGGTAGTCTTGAAAGCAG+GGG | 0.695243 | 1_4:-58916440 | Msa0173590:CDS |
ATATGCCCGAAGCTTTGAGG+AGG | 0.696255 | 1_4:-58912438 | Msa0173590:CDS |
GGAAACATTATTCTGAGCTG+CGG | 0.699382 | 1_4:-58913191 | Msa0173590:CDS |
AAGTGTTCCGAAAACCTGCG+TGG | 0.699640 | 1_4:+58913261 | None:intergenic |
TGTGGTGTCTGAGAAACTAG+GGG | 0.699681 | 1_4:+58916739 | None:intergenic |
AAATAAAGTTAAAATTCGTG+CGG | 0.700583 | 1_4:-58914955 | Msa0173590:CDS |
AACAGTATCGAGAATCAGTG+AGG | 0.709059 | 1_4:-58913212 | Msa0173590:CDS |
GATCTGTCATCATTGCAATG+AGG | 0.714057 | 1_4:+58918132 | None:intergenic |
GTAGAGCTAAAGGAAGCCAG+TGG | 0.716008 | 1_4:-58910971 | Msa0173590:CDS |
GGGATCTCAGTGGAGCAAGG+GGG | 0.723954 | 1_4:-58918729 | Msa0173590:CDS |
ATGAATTCAACTCCTAACTG+GGG | 0.726781 | 1_4:+58913018 | None:intergenic |
CATATCTATCTCTACCAGAG+GGG | 0.741033 | 1_4:-58918172 | Msa0173590:CDS |
CCTACAATCAGTAACAGCCG+CGG | 0.743042 | 1_4:-58920804 | Msa0173590:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTAAAATTGATTTTG+AGG | - | chr1_4:58909552-58909571 | Msa0173590:three_prime_UTR | 10.0% |
!!! | TTTTTTTATGATTTGATTTT+TGG | - | chr1_4:58909857-58909876 | Msa0173590:intron | 10.0% |
!!! | TTTTTTATGATTTGATTTTT+GGG | - | chr1_4:58909858-58909877 | Msa0173590:intron | 10.0% |
!! | ATACAAAAAAAAAAAAATAG+AGG | - | chr1_4:58915431-58915450 | Msa0173590:intron | 10.0% |
!!! | ATAATTTCTTTAAAATTTTC+AGG | - | chr1_4:58918581-58918600 | Msa0173590:intron | 10.0% |
!!! | AACAATAAAAAGATTAATTT+TGG | + | chr1_4:58920332-58920351 | None:intergenic | 10.0% |
!!! | CTGTTTTTAAATTAATTTTG+AGG | - | chr1_4:58909801-58909820 | Msa0173590:intron | 15.0% |
!!! | TTTTAAAAATGCATCATATA+TGG | + | chr1_4:58910284-58910303 | None:intergenic | 15.0% |
!!! | ATTGATTTATTTAAATTTCC+AGG | - | chr1_4:58911585-58911604 | Msa0173590:intron | 15.0% |
!!! | CAAAATATTTTCATAAAGAA+GGG | - | chr1_4:58912102-58912121 | Msa0173590:intron | 15.0% |
!! | AACCATTATTACATTAATTA+TGG | + | chr1_4:58914026-58914045 | None:intergenic | 15.0% |
!! | AAAAAAAAAAACATAACTGT+AGG | - | chr1_4:58914918-58914937 | Msa0173590:CDS | 15.0% |
!! | GATAATAATAACTAAGAAAT+AGG | + | chr1_4:58915589-58915608 | None:intergenic | 15.0% |
!! | ATGTAAAGATTGTATATATA+TGG | + | chr1_4:58917202-58917221 | None:intergenic | 15.0% |
!!! | GCATAAAAAAGTATTAATTT+GGG | + | chr1_4:58918841-58918860 | None:intergenic | 15.0% |
!!! | TGCATAAAAAAGTATTAATT+TGG | + | chr1_4:58918842-58918861 | None:intergenic | 15.0% |
!!! | ATATTTTTATGCTATAAATC+AGG | - | chr1_4:58919761-58919780 | Msa0173590:intron | 15.0% |
!! | AAAAATTACAGATTAAGTAA+GGG | + | chr1_4:58920610-58920629 | None:intergenic | 15.0% |
!! | AAAAAATTACAGATTAAGTA+AGG | + | chr1_4:58920611-58920630 | None:intergenic | 15.0% |
!!! | GGATTTTAGTATTTAAGATT+TGG | - | chr1_4:58909983-58910002 | Msa0173590:intron | 20.0% |
!! | ATACTATGTAATTAACATGA+AGG | + | chr1_4:58910419-58910438 | None:intergenic | 20.0% |
!!! | TTTTTGTTTCAGTATACTAA+AGG | - | chr1_4:58910541-58910560 | Msa0173590:intron | 20.0% |
!!! | TTTAAAATGACATGATTTCA+TGG | - | chr1_4:58911100-58911119 | Msa0173590:intron | 20.0% |
!! | TTAAAATGACATGATTTCAT+GGG | - | chr1_4:58911101-58911120 | Msa0173590:intron | 20.0% |
!! | AAGAAGTTGTCTAATAAATT+GGG | - | chr1_4:58911348-58911367 | Msa0173590:intron | 20.0% |
!! | ATTGTAAATTAAAATGGTAG+TGG | + | chr1_4:58911543-58911562 | None:intergenic | 20.0% |
!!! | ACAAGCATTGTAAATTAAAA+TGG | + | chr1_4:58911549-58911568 | None:intergenic | 20.0% |
!!! | TTTTTTTTCCTTAAGTGATT+TGG | - | chr1_4:58911776-58911795 | Msa0173590:intron | 20.0% |
!! | ATTAATAATTCAGTTCATGA+TGG | + | chr1_4:58911849-58911868 | None:intergenic | 20.0% |
!!! | GAAATTTTGTTAAGGAAAAA+AGG | + | chr1_4:58912045-58912064 | None:intergenic | 20.0% |
!!! | GCAAAATATTTTCATAAAGA+AGG | - | chr1_4:58912101-58912120 | Msa0173590:intron | 20.0% |
!! | ACTAACTATACACAAATTAA+AGG | + | chr1_4:58912612-58912631 | None:intergenic | 20.0% |
!!! | AATGTATAATCTGAAGTTTT+GGG | + | chr1_4:58912975-58912994 | None:intergenic | 20.0% |
!!! | TAATGTATAATCTGAAGTTT+TGG | + | chr1_4:58912976-58912995 | None:intergenic | 20.0% |
!!! | ATTACTTTTTCAATTTAGTC+TGG | - | chr1_4:58912992-58913011 | Msa0173590:intron | 20.0% |
!!! | ACTAAGTTTTAATTCTTTGA+AGG | - | chr1_4:58913854-58913873 | Msa0173590:CDS | 20.0% |
!!! | TTCTTTGAAGGAAAATAATA+TGG | - | chr1_4:58913866-58913885 | Msa0173590:CDS | 20.0% |
!!! | TTTTAACTTTATTTCTCCTA+TGG | + | chr1_4:58915136-58915155 | None:intergenic | 20.0% |
!! | AAATAAAGTTAAAATTCGTG+CGG | - | chr1_4:58915142-58915161 | Msa0173590:intron | 20.0% |
!!! | AATATCATTGATTATCTCTT+AGG | - | chr1_4:58915554-58915573 | Msa0173590:intron | 20.0% |
!!! | ACTAAGATTTACAGTATTTT+AGG | + | chr1_4:58915776-58915795 | None:intergenic | 20.0% |
!! | CTATATAATGTAGTTGAATA+AGG | + | chr1_4:58916024-58916043 | None:intergenic | 20.0% |
!! | CGGTATTATGATTTATTATA+TGG | - | chr1_4:58917104-58917123 | Msa0173590:intron | 20.0% |
!! | AGATTGTATATATATGGTAA+TGG | + | chr1_4:58917196-58917215 | None:intergenic | 20.0% |
!! | TAATAGTAAACAATAAGAAG+TGG | - | chr1_4:58917243-58917262 | Msa0173590:intron | 20.0% |
!! | TAAATGAGACAAAAAAAATG+AGG | + | chr1_4:58917438-58917457 | None:intergenic | 20.0% |
!! | TTAATTGAAGAAAATTAGCA+TGG | - | chr1_4:58917536-58917555 | Msa0173590:intron | 20.0% |
!!! | ATATTATCTAATGGATTCAA+AGG | + | chr1_4:58917643-58917662 | None:intergenic | 20.0% |
!!! | ATTAATGGAAATTCAAGTTT+TGG | - | chr1_4:58917727-58917746 | Msa0173590:CDS | 20.0% |
!!! | TTAATGGAAATTCAAGTTTT+GGG | - | chr1_4:58917728-58917747 | Msa0173590:intron | 20.0% |
!! | AAATAGTAACTACAATGTAT+AGG | + | chr1_4:58917908-58917927 | None:intergenic | 20.0% |
!! | GATCTCAAAAAATACATTAA+GGG | - | chr1_4:58918199-58918218 | Msa0173590:intron | 20.0% |
!!! | TTATTTAGAATAGTGTTTTG+GGG | + | chr1_4:58918331-58918350 | None:intergenic | 20.0% |
!!! | CTTATTTAGAATAGTGTTTT+GGG | + | chr1_4:58918332-58918351 | None:intergenic | 20.0% |
!! | TGACGATACATAAATATATT+AGG | - | chr1_4:58918534-58918553 | Msa0173590:intron | 20.0% |
!!! | ATTTCTTTAAAATTTTCAGG+TGG | - | chr1_4:58918584-58918603 | Msa0173590:intron | 20.0% |
!!! | TAAAAAAGTATTAATTTGGG+AGG | + | chr1_4:58918838-58918857 | None:intergenic | 20.0% |
!! | TGATGATTTCTAAATCTTAA+TGG | - | chr1_4:58918912-58918931 | Msa0173590:intron | 20.0% |
!! | GATGATTTCTAAATCTTAAT+GGG | - | chr1_4:58918913-58918932 | Msa0173590:intron | 20.0% |
!!! | CTTTATATGTAAATTTTCCT+TGG | - | chr1_4:58918946-58918965 | Msa0173590:intron | 20.0% |
!! | CATTATGACTTATACATAAA+TGG | - | chr1_4:58919498-58919517 | Msa0173590:CDS | 20.0% |
!! | TCATGATAATAAGTAAATAC+CGG | + | chr1_4:58919615-58919634 | None:intergenic | 20.0% |
!! | ATAGCATAAAAATATGTCAA+AGG | + | chr1_4:58919756-58919775 | None:intergenic | 20.0% |
!! | TATGATGTATATTCAAGAAT+GGG | + | chr1_4:58920276-58920295 | None:intergenic | 20.0% |
!! | ATATGATGTATATTCAAGAA+TGG | + | chr1_4:58920277-58920296 | None:intergenic | 20.0% |
!! | CTTGAATATACATCATATAT+TGG | - | chr1_4:58920279-58920298 | Msa0173590:intron | 20.0% |
!! | ATTTGAATTTCTCTGTAAAT+AGG | + | chr1_4:58920458-58920477 | None:intergenic | 20.0% |
!! | AGAAGATATAATTCTAAGTA+GGG | + | chr1_4:58920520-58920539 | None:intergenic | 20.0% |
!! | AAAATTACAGATTAAGTAAG+GGG | + | chr1_4:58920609-58920628 | None:intergenic | 20.0% |
!! | ATTAATAACGGCAATATTAA+GGG | - | chr1_4:58920677-58920696 | Msa0173590:intron | 20.0% |
! | ACAACATTATGAAGAAAATG+AGG | + | chr1_4:58909444-58909463 | None:intergenic | 25.0% |
!!! | GGTTTTTTTCTTGATGATTT+GGG | - | chr1_4:58909597-58909616 | Msa0173590:CDS | 25.0% |
!!! | AATTAATTTTGAGGTGAATG+AGG | - | chr1_4:58909810-58909829 | Msa0173590:intron | 25.0% |
!!! | ATTAATTTTGAGGTGAATGA+GGG | - | chr1_4:58909811-58909830 | Msa0173590:intron | 25.0% |
!! | TTAGTATTTAAGATTTGGAG+TGG | - | chr1_4:58909988-58910007 | Msa0173590:intron | 25.0% |
!! | TAGTATTTAAGATTTGGAGT+GGG | - | chr1_4:58909989-58910008 | Msa0173590:intron | 25.0% |
! | TGCTATAGATCTTACATAAA+CGG | + | chr1_4:58910129-58910148 | None:intergenic | 25.0% |
! | CATTAATTCTCTTCAAAAAG+TGG | + | chr1_4:58910354-58910373 | None:intergenic | 25.0% |
! | AGAGAATTAATGTTAACGAT+TGG | - | chr1_4:58910362-58910381 | Msa0173590:intron | 25.0% |
!!! | AGTTTCTAAAAGAGTTTTAG+TGG | - | chr1_4:58910774-58910793 | Msa0173590:CDS | 25.0% |
!! | TCTTTTAAACTATGTTGCAT+CGG | - | chr1_4:58910858-58910877 | Msa0173590:CDS | 25.0% |
! | TGGTAAAAAAATCACCAATT+TGG | - | chr1_4:58911210-58911229 | Msa0173590:intron | 25.0% |
! | GAAGAAGTTGTCTAATAAAT+TGG | - | chr1_4:58911347-58911366 | Msa0173590:intron | 25.0% |
! | GATTTATTTAAATTTCCAGG+TGG | - | chr1_4:58911588-58911607 | Msa0173590:intron | 25.0% |
! | AAGCTCTTTACAATATGAAT+CGG | - | chr1_4:58911647-58911666 | Msa0173590:intron | 25.0% |
! | TACCTAATTTCTAAACCTAA+AGG | + | chr1_4:58911738-58911757 | None:intergenic | 25.0% |
!! | TTTAGAAATTAGGTATTGTC+TGG | - | chr1_4:58911743-58911762 | Msa0173590:intron | 25.0% |
!! | TTAGAAATTAGGTATTGTCT+GGG | - | chr1_4:58911744-58911763 | Msa0173590:intron | 25.0% |
! | ATCACAAATAATGGTTTCAA+TGG | + | chr1_4:58911898-58911917 | None:intergenic | 25.0% |
! | AACCATTATTTGTGATTAAC+AGG | - | chr1_4:58911902-58911921 | Msa0173590:intron | 25.0% |
!! | GCTGTTTAGAAATTTTGTTA+AGG | + | chr1_4:58912053-58912072 | None:intergenic | 25.0% |
!! | CAAAATTTCTAAACAGCTTT+TGG | - | chr1_4:58912056-58912075 | Msa0173590:intron | 25.0% |
! | ACTACATCATTTATAATGTC+AGG | + | chr1_4:58912240-58912259 | None:intergenic | 25.0% |
! | ATACAAAAACAATGCTTAGT+TGG | - | chr1_4:58912655-58912674 | Msa0173590:intron | 25.0% |
! | AGTATGAAAAATATGTTACC+AGG | + | chr1_4:58913097-58913116 | None:intergenic | 25.0% |
! | TTTGAAGGAAAATAATATGG+AGG | - | chr1_4:58913869-58913888 | Msa0173590:CDS | 25.0% |
! | ATTACATTAATTATGGCCTA+AGG | + | chr1_4:58914019-58914038 | None:intergenic | 25.0% |
! | GGCCATAATTAATGTAATAA+TGG | - | chr1_4:58914021-58914040 | Msa0173590:intron | 25.0% |
!! | ATTTTACTGTGTCTTAGAAT+TGG | - | chr1_4:58914224-58914243 | Msa0173590:intron | 25.0% |
!! | TTTTACTGTGTCTTAGAATT+GGG | - | chr1_4:58914225-58914244 | Msa0173590:intron | 25.0% |
!!! | TGTTTATAAGTGGTTTTGTA+GGG | + | chr1_4:58914267-58914286 | None:intergenic | 25.0% |
! | CATGAAAATGTGTTTATAAG+TGG | + | chr1_4:58914277-58914296 | None:intergenic | 25.0% |
!!! | TCTAATACCATCTTTGATTT+TGG | - | chr1_4:58914426-58914445 | Msa0173590:intron | 25.0% |
!!! | CTAATACCATCTTTGATTTT+GGG | - | chr1_4:58914427-58914446 | Msa0173590:intron | 25.0% |
! | CATGAAAATGTGTTTATAAG+TGG | + | chr1_4:58914277-58914296 | None:intergenic | 25.0% |
! | CATGAAAATGTGTTTATAAG+TGG | + | chr1_4:58914277-58914296 | None:intergenic | 25.0% |
!!! | TCTAATACCATCTTTGATTT+TGG | - | chr1_4:58914426-58914445 | Msa0173590:intron | 25.0% |
!!! | CTAATACCATCTTTGATTTT+GGG | - | chr1_4:58914427-58914446 | Msa0173590:intron | 25.0% |
!!! | ATCCTTGAGTTTAGATTTTT+TGG | + | chr1_4:58915183-58915202 | None:intergenic | 25.0% |
! | TTCCCTATATTATTAGAATC+AGG | - | chr1_4:58915618-58915637 | Msa0173590:intron | 25.0% |
! | CTCCTGATTCTAATAATATA+GGG | + | chr1_4:58915623-58915642 | None:intergenic | 25.0% |
! | ACTCCTGATTCTAATAATAT+AGG | + | chr1_4:58915624-58915643 | None:intergenic | 25.0% |
!!! | AAGAATTTTCAAGGAGATTA+TGG | - | chr1_4:58915673-58915692 | Msa0173590:intron | 25.0% |
!!! | AGAATTTTCAAGGAGATTAT+GGG | - | chr1_4:58915674-58915693 | Msa0173590:intron | 25.0% |
!! | CTTCTCATTTTCGATATATT+TGG | - | chr1_4:58916065-58916084 | Msa0173590:intron | 25.0% |
! | TGTAGATGATGAGAAAAAAA+CGG | - | chr1_4:58916144-58916163 | Msa0173590:CDS | 25.0% |
!!! | TAATTTTCTTTGTAACTTGC+AGG | - | chr1_4:58916511-58916530 | Msa0173590:intron | 25.0% |
! | GTTAAAGTATGTGATTGTAA+AGG | - | chr1_4:58916762-58916781 | Msa0173590:CDS | 25.0% |
!! | TTTTAGTATGTTGCATACAA+AGG | + | chr1_4:58917483-58917502 | None:intergenic | 25.0% |
! | TCATCAAAAGCAAGAAAATA+TGG | + | chr1_4:58917587-58917606 | None:intergenic | 25.0% |
! | AGTATAGAACCACATATTAA+TGG | - | chr1_4:58917712-58917731 | Msa0173590:CDS | 25.0% |
! | CTTGAATTTCCATTAATATG+TGG | + | chr1_4:58917724-58917743 | None:intergenic | 25.0% |
!!! | TAATGGAAATTCAAGTTTTG+GGG | - | chr1_4:58917729-58917748 | Msa0173590:intron | 25.0% |
! | AACAATGAAAATGTATGTCA+AGG | + | chr1_4:58917979-58917998 | None:intergenic | 25.0% |
! | GGATCTCAAAAAATACATTA+AGG | - | chr1_4:58918198-58918217 | Msa0173590:intron | 25.0% |
!!! | TATTTAGAATAGTGTTTTGG+GGG | + | chr1_4:58918330-58918349 | None:intergenic | 25.0% |
!!! | CCTTATTTAGAATAGTGTTT+TGG | + | chr1_4:58918333-58918352 | None:intergenic | 25.0% |
! | CCAAAACACTATTCTAAATA+AGG | - | chr1_4:58918330-58918349 | Msa0173590:intron | 25.0% |
!! | GCATTTCTTTAGTCTTTATT+TGG | + | chr1_4:58918426-58918445 | None:intergenic | 25.0% |
! | AGACTAAAGAAATGCATTAA+AGG | - | chr1_4:58918431-58918450 | Msa0173590:intron | 25.0% |
!!! | ACTTTTTTATGCAGTTCTTT+TGG | - | chr1_4:58918849-58918868 | Msa0173590:intron | 25.0% |
! | ATGAAAAGGGTAAATGAAAA+CGG | + | chr1_4:58918890-58918909 | None:intergenic | 25.0% |
! | AGAAATCATCAAGATGAAAA+GGG | + | chr1_4:58918903-58918922 | None:intergenic | 25.0% |
! | TAGAAATCATCAAGATGAAA+AGG | + | chr1_4:58918904-58918923 | None:intergenic | 25.0% |
!! | AAATTTTCCTTGGTTAGATA+TGG | - | chr1_4:58918956-58918975 | Msa0173590:intron | 25.0% |
! | AAATGCTAATAATGGCATAT+TGG | - | chr1_4:58919035-58919054 | Msa0173590:intron | 25.0% |
!!! | TTAAACATTCTATGCCATTT+TGG | + | chr1_4:58919065-58919084 | None:intergenic | 25.0% |
! | GAATGTTTAAAAGATTCTGA+AGG | - | chr1_4:58919075-58919094 | Msa0173590:intron | 25.0% |
!! | TTGATTGGGTTATATTTTAC+AGG | - | chr1_4:58919216-58919235 | Msa0173590:intron | 25.0% |
! | ACTGTCATTGAAATCATTAA+AGG | - | chr1_4:58919385-58919404 | Msa0173590:intron | 25.0% |
!!! | AACAATGAGAATAATTTGCT+AGG | + | chr1_4:58919586-58919605 | None:intergenic | 25.0% |
! | AATTAAAGACATGTCAAACT+TGG | - | chr1_4:58920076-58920095 | Msa0173590:intron | 25.0% |
! | CATTAACTTTACAATCGAAT+GGG | + | chr1_4:58920117-58920136 | None:intergenic | 25.0% |
! | ACATTAACTTTACAATCGAA+TGG | + | chr1_4:58920118-58920137 | None:intergenic | 25.0% |
!! | TGTAAAGTTAATGTTTTCCT+TGG | - | chr1_4:58920124-58920143 | Msa0173590:intron | 25.0% |
! | ATGATGTATATTCAAGAATG+GGG | + | chr1_4:58920275-58920294 | None:intergenic | 25.0% |
! | GAGAAGATATAATTCTAAGT+AGG | + | chr1_4:58920521-58920540 | None:intergenic | 25.0% |
! | CTCTATACAACTAAAAATTC+TGG | + | chr1_4:58920545-58920564 | None:intergenic | 25.0% |
!!! | CAGAATTTTTAGTTGTATAG+AGG | - | chr1_4:58920543-58920562 | Msa0173590:intron | 25.0% |
!! | GTTATTAATCAACAGCTTTT+GGG | + | chr1_4:58920666-58920685 | None:intergenic | 25.0% |
!! | CAAAAGCTGTTGATTAATAA+CGG | - | chr1_4:58920665-58920684 | Msa0173590:intron | 25.0% |
! | GATTAATAACGGCAATATTA+AGG | - | chr1_4:58920676-58920695 | Msa0173590:intron | 25.0% |
! | AAGAAAATTTCACGAATTGA+TGG | + | chr1_4:58920815-58920834 | None:intergenic | 25.0% |
!!! | TTCGTGAAATTTTCTTGTTT+TGG | - | chr1_4:58920819-58920838 | Msa0173590:five_prime_UTR | 25.0% |
! | CATTAATAATGTCATCAAAG+AGG | + | chr1_4:58920873-58920892 | None:intergenic | 25.0% |
! | TGATGACATTATTAATGTCT+AGG | - | chr1_4:58920876-58920895 | Msa0173590:five_prime_UTR | 25.0% |
! | ACATTATTAATGTCTAGGAA+GGG | - | chr1_4:58920881-58920900 | Msa0173590:five_prime_UTR | 25.0% |
! | ACCTTTATATTCAAGTTTCG+CGG | - | chr1_4:58909174-58909193 | Msa0173590:three_prime_UTR | 30.0% |
! | TTGTAGGTTAAATCGATTCA+CGG | + | chr1_4:58909280-58909299 | None:intergenic | 30.0% |
!!! | CGGTTTTTTTCTTGATGATT+TGG | - | chr1_4:58909596-58909615 | Msa0173590:CDS | 30.0% |
!!! | TTTCAGTTTTGAAGTGTTTG+AGG | - | chr1_4:58909739-58909758 | Msa0173590:intron | 30.0% |
ACGAAGAAAATTGTTGAATC+TGG | - | chr1_4:58909885-58909904 | Msa0173590:intron | 30.0% | |
!! | TTTTAGATTCGAAGTGTTTG+AGG | - | chr1_4:58909938-58909957 | Msa0173590:intron | 30.0% |
TGTAATTAACATGAAGGCTT+AGG | + | chr1_4:58910413-58910432 | None:intergenic | 30.0% | |
TCAGTATACTAAAGGATCAA+TGG | - | chr1_4:58910549-58910568 | Msa0173590:intron | 30.0% | |
! | AATCTAGAAGTGTGAATAAG+CGG | - | chr1_4:58910584-58910603 | Msa0173590:intron | 30.0% |
TTTCGAAACATGAAGTAACA+TGG | - | chr1_4:58910700-58910719 | Msa0173590:CDS | 30.0% | |
ATTGATGTCAGTATTAGTGT+AGG | - | chr1_4:58910815-58910834 | Msa0173590:CDS | 30.0% | |
! | AGGTTTTCTTCAAAGTTATC+GGG | + | chr1_4:58911005-58911024 | None:intergenic | 30.0% |
! | CAGGTTTTCTTCAAAGTTAT+CGG | + | chr1_4:58911006-58911025 | None:intergenic | 30.0% |
TTCCTCTCTCAAAACATAAA+TGG | + | chr1_4:58911036-58911055 | None:intergenic | 30.0% | |
!!! | ATGTTTTGAGAGAGGAAATT+CGG | - | chr1_4:58911039-58911058 | Msa0173590:CDS | 30.0% |
! | ACATGATTTCATGGGTTTTT+GGG | - | chr1_4:58911109-58911128 | Msa0173590:intron | 30.0% |
! | TTTGAGGTTTATCCTTTGTT+TGG | + | chr1_4:58911142-58911161 | None:intergenic | 30.0% |
! | CATCATACCTGTATTTCTAT+TGG | - | chr1_4:58911176-58911195 | Msa0173590:intron | 30.0% |
TTCATAGCCAATAGAAATAC+AGG | + | chr1_4:58911186-58911205 | None:intergenic | 30.0% | |
! | TTCTATTGGCTATGAATACA+TGG | - | chr1_4:58911190-58911209 | Msa0173590:intron | 30.0% |
CAATTAATATGCATGATGCA+TGG | + | chr1_4:58911241-58911260 | None:intergenic | 30.0% | |
TCAAAATGTGAGGTTTAAAC+AGG | + | chr1_4:58911307-58911326 | None:intergenic | 30.0% | |
ACGTAATAGATCCATTGAAA+TGG | - | chr1_4:58911621-58911640 | Msa0173590:intron | 30.0% | |
TAATAGATCCATTGAAATGG+TGG | - | chr1_4:58911624-58911643 | Msa0173590:intron | 30.0% | |
AGCTCTTTACAATATGAATC+GGG | - | chr1_4:58911648-58911667 | Msa0173590:intron | 30.0% | |
AAGGCATAATGCATACAATA+CGG | + | chr1_4:58911719-58911738 | None:intergenic | 30.0% | |
ATTGTATGCATTATGCCTTT+AGG | - | chr1_4:58911720-58911739 | Msa0173590:intron | 30.0% | |
! | TGCCTTTAGGTTTAGAAATT+AGG | - | chr1_4:58911733-58911752 | Msa0173590:intron | 30.0% |
TTTCTAAGCCAAATCACTTA+AGG | + | chr1_4:58911787-58911806 | None:intergenic | 30.0% | |
GACACTATTGTATGCATTAA+TGG | - | chr1_4:58911815-58911834 | Msa0173590:intron | 30.0% | |
TGCCTGTTAATCACAAATAA+TGG | + | chr1_4:58911907-58911926 | None:intergenic | 30.0% | |
ATCATTATAATGTCCTGGTA+AGG | - | chr1_4:58911985-58912004 | Msa0173590:intron | 30.0% | |
AAAATAATGTTGACCTTACC+AGG | + | chr1_4:58912001-58912020 | None:intergenic | 30.0% | |
!!! | CAACATTATTTTTTTCGCTG+TGG | - | chr1_4:58912009-58912028 | Msa0173590:intron | 30.0% |
! | ATCTCTTATGTTTGTTGAGA+TGG | - | chr1_4:58912284-58912303 | Msa0173590:intron | 30.0% |
! | TCTCTTATGTTTGTTGAGAT+GGG | - | chr1_4:58912285-58912304 | Msa0173590:intron | 30.0% |
!!! | ACTCTTTTTTTTTCCTCATC+AGG | - | chr1_4:58912567-58912586 | Msa0173590:intron | 30.0% |
!!! | CTCTTTTTTTTTCCTCATCA+GGG | - | chr1_4:58912568-58912587 | Msa0173590:intron | 30.0% |
! | ACAGTAATTTGCAAAGTTAG+TGG | - | chr1_4:58912762-58912781 | Msa0173590:intron | 30.0% |
AGAATAACAAATCTGGACAA+AGG | + | chr1_4:58913051-58913070 | None:intergenic | 30.0% | |
ACAGTTCAGAATAACAAATC+TGG | + | chr1_4:58913058-58913077 | None:intergenic | 30.0% | |
TGATGGCTATTCAATTAATC+AGG | - | chr1_4:58913148-58913167 | Msa0173590:CDS | 30.0% | |
!! | TATCATCTTTCTTTTGAGAG+TGG | + | chr1_4:58913222-58913241 | None:intergenic | 30.0% |
ACTCTCAAAAGAAAGATGAT+AGG | - | chr1_4:58913221-58913240 | Msa0173590:CDS | 30.0% | |
CTCTCAAAAGAAAGATGATA+GGG | - | chr1_4:58913222-58913241 | Msa0173590:CDS | 30.0% | |
TGCCATTATATAGTGTTTGT+TGG | - | chr1_4:58913444-58913463 | Msa0173590:CDS | 30.0% | |
AGCCAACAAACACTATATAA+TGG | + | chr1_4:58913449-58913468 | None:intergenic | 30.0% | |
GTGAATAAGTGCAATATTGA+TGG | - | chr1_4:58913506-58913525 | Msa0173590:CDS | 30.0% | |
TTACAGAAAGAAAGAAAGAG+TGG | - | chr1_4:58913770-58913789 | Msa0173590:CDS | 30.0% | |
AAAGAAAGAGTGGAAAATGT+TGG | - | chr1_4:58913780-58913799 | Msa0173590:CDS | 30.0% | |
AGAAACAAAAAACTCCTCTT+TGG | - | chr1_4:58913939-58913958 | Msa0173590:CDS | 30.0% | |
TTAATTATGGCCTAAGGTTA+AGG | + | chr1_4:58914013-58914032 | None:intergenic | 30.0% | |
TTTACTGTGTCTTAGAATTG+GGG | - | chr1_4:58914226-58914245 | Msa0173590:intron | 30.0% | |
!!! | GTGTTTATAAGTGGTTTTGT+AGG | + | chr1_4:58914268-58914287 | None:intergenic | 30.0% |
ATGCCATATCTTATCCAAAA+CGG | - | chr1_4:58914294-58914313 | Msa0173590:intron | 30.0% | |
GAAAATGTGTTTATAAGTGG+TGG | + | chr1_4:58914274-58914293 | None:intergenic | 30.0% | |
ATGCCATATCTTATCCAAAA+CGG | - | chr1_4:58914294-58914313 | Msa0173590:intron | 30.0% | |
GAAAATGTGTTTATAAGTGG+TGG | + | chr1_4:58914274-58914293 | None:intergenic | 30.0% | |
ATGCCATATCTTATCCAAAA+CGG | - | chr1_4:58914294-58914313 | Msa0173590:intron | 30.0% | |
!! | CTTGATGATGTGTTTATAAG+TGG | + | chr1_4:58914849-58914868 | None:intergenic | 30.0% |
GTCCAAAAAATCTAAACTCA+AGG | - | chr1_4:58915178-58915197 | Msa0173590:intron | 30.0% | |
! | TTCCATTTGCTGATAAGATA+TGG | - | chr1_4:58915246-58915265 | Msa0173590:intron | 30.0% |
TTCCATATCTTATCAGCAAA+TGG | + | chr1_4:58915251-58915270 | None:intergenic | 30.0% | |
TCCTTGAAAATTCTTACAGT+GGG | + | chr1_4:58915668-58915687 | None:intergenic | 30.0% | |
!! | GAATTTTCAAGGAGATTATG+GGG | - | chr1_4:58915675-58915694 | Msa0173590:intron | 30.0% |
! | AATCTTAGTTACAGAGTGTT+TGG | - | chr1_4:58915787-58915806 | Msa0173590:intron | 30.0% |
! | ATCTTAGTTACAGAGTGTTT+GGG | - | chr1_4:58915788-58915807 | Msa0173590:intron | 30.0% |
CCTATATCAACAAATCACAA+TGG | + | chr1_4:58915842-58915861 | None:intergenic | 30.0% | |
!! | CCATTGTGATTTGTTGATAT+AGG | - | chr1_4:58915839-58915858 | Msa0173590:intron | 30.0% |
! | TATAGTTTGTCCTTTGTTGT+TGG | - | chr1_4:58915864-58915883 | Msa0173590:intron | 30.0% |
TCAAGAGTTCAAACACAATT+AGG | - | chr1_4:58915954-58915973 | Msa0173590:CDS | 30.0% | |
AATGAGAAGATAACGACATT+TGG | + | chr1_4:58916054-58916073 | None:intergenic | 30.0% | |
GAGAAAAAAACGGTGATTAA+AGG | - | chr1_4:58916154-58916173 | Msa0173590:CDS | 30.0% | |
CTCACCAAAACAAATAAAGA+CGG | - | chr1_4:58916201-58916220 | Msa0173590:CDS | 30.0% | |
!! | TTGACCGTCTTTATTTGTTT+TGG | + | chr1_4:58916208-58916227 | None:intergenic | 30.0% |
GAACTAACTTCACTTAAAAG+TGG | + | chr1_4:58916292-58916311 | None:intergenic | 30.0% | |
! | TGAAAAAGCTTGAACCTTTT+GGG | + | chr1_4:58916422-58916441 | None:intergenic | 30.0% |
! | ATGAAAAAGCTTGAACCTTT+TGG | + | chr1_4:58916423-58916442 | None:intergenic | 30.0% |
TAGCTGTTTGTCATCTTATT+TGG | - | chr1_4:58916544-58916563 | Msa0173590:intron | 30.0% | |
TACTTAAATCATGTTGGACT+AGG | - | chr1_4:58916644-58916663 | Msa0173590:intron | 30.0% | |
ACTTAAATCATGTTGGACTA+GGG | - | chr1_4:58916645-58916664 | Msa0173590:intron | 30.0% | |
CACATACTTTAACATTCACA+TGG | + | chr1_4:58916755-58916774 | None:intergenic | 30.0% | |
!!! | TCATGAATCTCTCTTGTTTT+GGG | + | chr1_4:58917007-58917026 | None:intergenic | 30.0% |
!! | ATCATGAATCTCTCTTGTTT+TGG | + | chr1_4:58917008-58917027 | None:intergenic | 30.0% |
AAAACAAGAGAGATTCATGA+TGG | - | chr1_4:58917007-58917026 | Msa0173590:intron | 30.0% | |
AGCTACTATAAACCAAGAAT+GGG | + | chr1_4:58917315-58917334 | None:intergenic | 30.0% | |
GAGACAAAAAAAATGAGGAA+AGG | + | chr1_4:58917433-58917452 | None:intergenic | 30.0% | |
!! | ATTTTCTTGCTTTTGATGAG+TGG | - | chr1_4:58917588-58917607 | Msa0173590:CDS | 30.0% |
!! | TTTTCTTGCTTTTGATGAGT+GGG | - | chr1_4:58917589-58917608 | Msa0173590:CDS | 30.0% |
!! | AATGGAAATTCAAGTTTTGG+GGG | - | chr1_4:58917730-58917749 | Msa0173590:intron | 30.0% |
! | TTAACTAAAGCACTTGAAGA+GGG | + | chr1_4:58917790-58917809 | None:intergenic | 30.0% |
!!! | TTTTTTGAGATCCTCCATAT+TGG | + | chr1_4:58918191-58918210 | None:intergenic | 30.0% |
AATACATTAAGGGATGACTT+TGG | - | chr1_4:58918209-58918228 | Msa0173590:intron | 30.0% | |
!! | ATTTGAGAGTATTGCAAAGA+CGG | + | chr1_4:58918274-58918293 | None:intergenic | 30.0% |
AAAGGATGCATAGAAATGAA+GGG | + | chr1_4:58918374-58918393 | None:intergenic | 30.0% | |
AAAAGGATGCATAGAAATGA+AGG | + | chr1_4:58918375-58918394 | None:intergenic | 30.0% | |
! | TTAGTCTTTATTTGGAAGTC+AGG | + | chr1_4:58918418-58918437 | None:intergenic | 30.0% |
! | AATCCTAATTTTCACTGTCA+TGG | - | chr1_4:58918502-58918521 | Msa0173590:intron | 30.0% |
! | AGATCATGCTCTAGATAAAA+AGG | - | chr1_4:58918793-58918812 | Msa0173590:intron | 30.0% |
ATTTGGGAGGATAAAATGTA+AGG | + | chr1_4:58918825-58918844 | None:intergenic | 30.0% | |
TTGAAATCATTAAAGGATCC+AGG | - | chr1_4:58919392-58919411 | Msa0173590:intron | 30.0% | |
TATTCTCATTGTTCATGATC+CGG | - | chr1_4:58919593-58919612 | Msa0173590:intron | 30.0% | |
TTTAGTTGCAAAGCTTAGAA+CGG | - | chr1_4:58919652-58919671 | Msa0173590:intron | 30.0% | |
TTTATGCTATAAATCAGGCA+TGG | - | chr1_4:58919766-58919785 | Msa0173590:intron | 30.0% | |
AAAGATGCTATTACGAAGAT+TGG | - | chr1_4:58919810-58919829 | Msa0173590:intron | 30.0% | |
AAGATGCTATTACGAAGATT+GGG | - | chr1_4:58919811-58919830 | Msa0173590:intron | 30.0% | |
GTCTTTAATTACCTGAATCA+TGG | + | chr1_4:58920066-58920085 | None:intergenic | 30.0% | |
!! | ACCTATTTTAAATGGTGAAC+TGG | - | chr1_4:58920194-58920213 | Msa0173590:intron | 30.0% |
! | ACCAGTTCACCATTTAAAAT+AGG | + | chr1_4:58920198-58920217 | None:intergenic | 30.0% |
GAATTTCTCTGTAAATAGGA+AGG | + | chr1_4:58920454-58920473 | None:intergenic | 30.0% | |
AGAGAAATTCAAATGTGCAT+GGG | - | chr1_4:58920464-58920483 | Msa0173590:intron | 30.0% | |
CCTATGTGATACAAACTAAA+TGG | + | chr1_4:58920577-58920596 | None:intergenic | 30.0% | |
!! | CCATTTAGTTTGTATCACAT+AGG | - | chr1_4:58920574-58920593 | Msa0173590:intron | 30.0% |
! | CGTTATTAATCAACAGCTTT+TGG | + | chr1_4:58920667-58920686 | None:intergenic | 30.0% |
GACATTATTAATGTCTAGGA+AGG | - | chr1_4:58920880-58920899 | Msa0173590:five_prime_UTR | 30.0% | |
GAGAGAGAAAACAAGAGAAA+GGG | + | chr1_4:58909253-58909272 | None:intergenic | 35.0% | |
!!! | AATTGATTTTGAGGTGAGTG+AGG | - | chr1_4:58909561-58909580 | Msa0173590:three_prime_UTR | 35.0% |
!!! | ATTGATTTTGAGGTGAGTGA+GGG | - | chr1_4:58909562-58909581 | Msa0173590:three_prime_UTR | 35.0% |
!! | GAGTGAGGGTTATTGTTTTA+CGG | - | chr1_4:58909576-58909595 | Msa0173590:exon | 35.0% |
! | TTTGAAGTGTTTGAGGTGAA+TGG | - | chr1_4:58909746-58909765 | Msa0173590:intron | 35.0% |
CTCATAATATCGACAGAAAG+AGG | + | chr1_4:58910061-58910080 | None:intergenic | 35.0% | |
TGTTGATGCACTTGAATCTT+TGG | - | chr1_4:58910088-58910107 | Msa0173590:CDS | 35.0% | |
AACAGAATAGAATGTGACAC+AGG | - | chr1_4:58910303-58910322 | Msa0173590:CDS | 35.0% | |
ACAGAATAGAATGTGACACA+GGG | - | chr1_4:58910304-58910323 | Msa0173590:CDS | 35.0% | |
ACACTTCTAGATTTCCTTGT+CGG | + | chr1_4:58910577-58910596 | None:intergenic | 35.0% | |
GATATTTCTCCTGAGAAAGA+TGG | - | chr1_4:58910622-58910641 | Msa0173590:intron | 35.0% | |
GCTCAAGTAAAAACAAGCAA+CGG | - | chr1_4:58910650-58910669 | Msa0173590:intron | 35.0% | |
CTCAAGTAAAAACAAGCAAC+GGG | - | chr1_4:58910651-58910670 | Msa0173590:intron | 35.0% | |
ATTGCAATACAATACCATGC+AGG | + | chr1_4:58910751-58910770 | None:intergenic | 35.0% | |
AAACATAAATGGCTCTTGTC+AGG | + | chr1_4:58911025-58911044 | None:intergenic | 35.0% | |
!!! | AGCCATTTATGTTTTGAGAG+AGG | - | chr1_4:58911031-58911050 | Msa0173590:CDS | 35.0% |
!!! | TGTTTTGAGAGAGGAAATTC+GGG | - | chr1_4:58911040-58911059 | Msa0173590:CDS | 35.0% |
! | GGATTTGAGTCTTTCTGTTT+TGG | - | chr1_4:58911074-58911093 | Msa0173590:CDS | 35.0% |
! | GACATGATTTCATGGGTTTT+TGG | - | chr1_4:58911108-58911127 | Msa0173590:intron | 35.0% |
TTGGGTATTACACCAAACAA+AGG | - | chr1_4:58911127-58911146 | Msa0173590:intron | 35.0% | |
!!! | TGCACTTGGTTTTGTATTTG+AGG | + | chr1_4:58911158-58911177 | None:intergenic | 35.0% |
AAATACAGGTATGATGCACT+TGG | + | chr1_4:58911172-58911191 | None:intergenic | 35.0% | |
TGAACAGGATTCAAAATGTG+AGG | + | chr1_4:58911317-58911336 | None:intergenic | 35.0% | |
TCTTCTTCTGTGTATTGAAC+AGG | + | chr1_4:58911332-58911351 | None:intergenic | 35.0% | |
CTAATAAATTGGGATCTCAG+TGG | - | chr1_4:58911358-58911377 | Msa0173590:intron | 35.0% | |
TATGAAGCATACAGAAAGCA+TGG | - | chr1_4:58911405-58911424 | Msa0173590:CDS | 35.0% | |
! | ACAGAAAGCATGGTAAAGAT+TGG | - | chr1_4:58911415-58911434 | Msa0173590:CDS | 35.0% |
!! | AAGAAGGTGTGCTTTTGTTT+TGG | - | chr1_4:58911438-58911457 | Msa0173590:CDS | 35.0% |
CTCTTTCATTTCGAAACTTG+AGG | - | chr1_4:58911482-58911501 | Msa0173590:CDS | 35.0% | |
! | TTCGAAACTTGAGGACATTT+TGG | - | chr1_4:58911491-58911510 | Msa0173590:CDS | 35.0% |
! | TCGAAACTTGAGGACATTTT+GGG | - | chr1_4:58911492-58911511 | Msa0173590:CDS | 35.0% |
AATGGATCTATTACGTACAG+CGG | + | chr1_4:58911617-58911636 | None:intergenic | 35.0% | |
GACAGATCATTATAATGTCC+TGG | - | chr1_4:58911980-58911999 | Msa0173590:intron | 35.0% | |
!!! | TATTTTTTTCGCTGTGGTGT+AGG | - | chr1_4:58912015-58912034 | Msa0173590:intron | 35.0% |
! | TTTCTAAACAGCTTTTGGTC+TGG | - | chr1_4:58912061-58912080 | Msa0173590:intron | 35.0% |
AAAACTATACTGCAGAAGTG+AGG | + | chr1_4:58912191-58912210 | None:intergenic | 35.0% | |
ATGTAGTTCATGCTTACACT+TGG | - | chr1_4:58912253-58912272 | Msa0173590:intron | 35.0% | |
! | TTATGTTTGTTGAGATGGGT+TGG | - | chr1_4:58912289-58912308 | Msa0173590:intron | 35.0% |
ACTTCAGCTTAATGTCTCAA+AGG | - | chr1_4:58912447-58912466 | Msa0173590:CDS | 35.0% | |
!!! | TTTTTTCCTCATCAGGGAAT+TGG | - | chr1_4:58912574-58912593 | Msa0173590:intron | 35.0% |
! | TTTTTCCTCATCAGGGAATT+GGG | - | chr1_4:58912575-58912594 | Msa0173590:intron | 35.0% |
!!! | CTGCACAGTCAGTTTTTTTT+TGG | - | chr1_4:58912693-58912712 | Msa0173590:intron | 35.0% |
!!! | GTATAATCTGAAGTTTTGGG+TGG | + | chr1_4:58912972-58912991 | None:intergenic | 35.0% |
!! | TCTTTTGAGAGTGGTAAACT+GGG | + | chr1_4:58913213-58913232 | None:intergenic | 35.0% |
!! | TTCTTTTGAGAGTGGTAAAC+TGG | + | chr1_4:58913214-58913233 | None:intergenic | 35.0% |
! | GACTTCAAGCTTCTTTTGTT+AGG | + | chr1_4:58913262-58913281 | None:intergenic | 35.0% |
! | ATGTAGCTTTTGCATTAAGC+AGG | - | chr1_4:58913314-58913333 | Msa0173590:intron | 35.0% |
! | TGTAGCTTTTGCATTAAGCA+GGG | - | chr1_4:58913315-58913334 | Msa0173590:intron | 35.0% |
AGTTGAATACCATTCTATCC+CGG | + | chr1_4:58913420-58913439 | None:intergenic | 35.0% | |
TAGAGATACTAGTTCCTTGA+TGG | - | chr1_4:58913701-58913720 | Msa0173590:CDS | 35.0% | |
! | TACTAGTTCCTTGATGGATA+TGG | - | chr1_4:58913707-58913726 | Msa0173590:CDS | 35.0% |
! | CTGTAAAATTTTCCTCCCTT+AGG | + | chr1_4:58913756-58913775 | None:intergenic | 35.0% |
GGAAATTATCAGCTTGATGA+CGG | - | chr1_4:58913801-58913820 | Msa0173590:CDS | 35.0% | |
AACAAAAAACTCCTCTTTGG+AGG | - | chr1_4:58913942-58913961 | Msa0173590:CDS | 35.0% | |
TTGGAGGTAATTCTGTCAAT+AGG | - | chr1_4:58913958-58913977 | Msa0173590:CDS | 35.0% | |
TGGAGGTAATTCTGTCAATA+GGG | - | chr1_4:58913959-58913978 | Msa0173590:intron | 35.0% | |
TGCCATATCTTATCCAAAAC+GGG | - | chr1_4:58914295-58914314 | Msa0173590:intron | 35.0% | |
TGCCATATCTTATCCAAAAC+GGG | - | chr1_4:58914295-58914314 | Msa0173590:intron | 35.0% | |
!!! | ATTGAGAGGTTTAGTTTTGG+GGG | + | chr1_4:58914590-58914609 | None:intergenic | 35.0% |
!!! | CATTGAGAGGTTTAGTTTTG+GGG | + | chr1_4:58914591-58914610 | None:intergenic | 35.0% |
!!! | GCATTGAGAGGTTTAGTTTT+GGG | + | chr1_4:58914592-58914611 | None:intergenic | 35.0% |
TGCCATATCTTATCCAAAAC+GGG | - | chr1_4:58914295-58914314 | Msa0173590:intron | 35.0% | |
GATGATGTGTTTATAAGTGG+TGG | + | chr1_4:58914846-58914865 | None:intergenic | 35.0% | |
TATGTTGAGAAGTCCCATAT+TGG | + | chr1_4:58914883-58914902 | None:intergenic | 35.0% | |
!! | ATGGCTTGTTGATGTTGATT+CGG | + | chr1_4:58915117-58915136 | None:intergenic | 35.0% |
AATCAACATCAACAAGCCAT+AGG | - | chr1_4:58915117-58915136 | Msa0173590:intron | 35.0% | |
!! | TTTTGATTCAGAGAGAGCAT+TGG | + | chr1_4:58915219-58915238 | None:intergenic | 35.0% |
TGTGCGGGATAAAACAATTA+GGG | + | chr1_4:58915318-58915337 | None:intergenic | 35.0% | |
ATGTGCGGGATAAAACAATT+AGG | + | chr1_4:58915319-58915338 | None:intergenic | 35.0% | |
AAACACAACACAAAATGTGC+GGG | + | chr1_4:58915333-58915352 | None:intergenic | 35.0% | |
CAAACACAACACAAAATGTG+CGG | + | chr1_4:58915334-58915353 | None:intergenic | 35.0% | |
AGAACAGAAACTACAGCATT+AGG | - | chr1_4:58915471-58915490 | Msa0173590:intron | 35.0% | |
AATCAGGAGTCTCTTATTAG+TGG | - | chr1_4:58915634-58915653 | Msa0173590:intron | 35.0% | |
ATCAGGAGTCTCTTATTAGT+GGG | - | chr1_4:58915635-58915654 | Msa0173590:intron | 35.0% | |
! | TCCCACTGTAAGAATTTTCA+AGG | - | chr1_4:58915664-58915683 | Msa0173590:intron | 35.0% |
CTCCTTGAAAATTCTTACAG+TGG | + | chr1_4:58915669-58915688 | None:intergenic | 35.0% | |
TTTCCACAAAATGTAGGTGA+TGG | + | chr1_4:58915741-58915760 | None:intergenic | 35.0% | |
CTACTGTTTCCACAAAATGT+AGG | + | chr1_4:58915747-58915766 | None:intergenic | 35.0% | |
!!! | CGTCTTTATTTGTTTTGGTG+AGG | + | chr1_4:58916203-58916222 | None:intergenic | 35.0% |
! | CGTCTACTTCTTTGTTTAGT+TGG | + | chr1_4:58916316-58916335 | None:intergenic | 35.0% |
ATAAGACTTCTCTTTACGCA+TGG | + | chr1_4:58916362-58916381 | None:intergenic | 35.0% | |
!! | TTTTGGGTAGAGTGCTTATT+AGG | + | chr1_4:58916406-58916425 | None:intergenic | 35.0% |
TAATAAGCACTCTACCCAAA+AGG | - | chr1_4:58916405-58916424 | Msa0173590:CDS | 35.0% | |
!! | TCTGCATTCTAAAGCTTTGA+GGG | - | chr1_4:58916456-58916475 | Msa0173590:CDS | 35.0% |
!! | GCAGATGGTTTACTTTTGAA+TGG | - | chr1_4:58916570-58916589 | Msa0173590:intron | 35.0% |
ATAGTGCACTTGATTATCCA+TGG | - | chr1_4:58916597-58916616 | Msa0173590:intron | 35.0% | |
! | AATTCTCTTTTGGCAAACCA+TGG | + | chr1_4:58916617-58916636 | None:intergenic | 35.0% |
GTTTGCCAAAAGAGAATTTG+TGG | - | chr1_4:58916619-58916638 | Msa0173590:intron | 35.0% | |
! | GTACTCCACAAATTCTCTTT+TGG | + | chr1_4:58916627-58916646 | None:intergenic | 35.0% |
! | GTGGAGTACTTAAATCATGT+TGG | - | chr1_4:58916638-58916657 | Msa0173590:intron | 35.0% |
! | TTGAGTGGAGTGTCATAAAA+AGG | - | chr1_4:58916690-58916709 | Msa0173590:CDS | 35.0% |
TTGGCAAGACCATTATATGT+TGG | - | chr1_4:58916959-58916978 | Msa0173590:intron | 35.0% | |
ACACGTTGTCCAACATATAA+TGG | + | chr1_4:58916971-58916990 | None:intergenic | 35.0% | |
!!! | CATGAATCTCTCTTGTTTTG+GGG | + | chr1_4:58917006-58917025 | None:intergenic | 35.0% |
ATGAATTCAACTCCTAACTG+GGG | + | chr1_4:58917082-58917101 | None:intergenic | 35.0% | |
GATGAATTCAACTCCTAACT+GGG | + | chr1_4:58917083-58917102 | None:intergenic | 35.0% | |
TGATGAATTCAACTCCTAAC+TGG | + | chr1_4:58917084-58917103 | None:intergenic | 35.0% | |
GTTAGGAGTTGAATTCATCA+CGG | - | chr1_4:58917084-58917103 | Msa0173590:intron | 35.0% | |
!! | ATGGAGCTGATTTTGATCAT+AGG | + | chr1_4:58917177-58917196 | None:intergenic | 35.0% |
! | TTGTGCTATTCTTCTATGCA+CGG | - | chr1_4:58917270-58917289 | Msa0173590:intron | 35.0% |
CAGCTACTATAAACCAAGAA+TGG | + | chr1_4:58917316-58917335 | None:intergenic | 35.0% | |
CATTCTTGGTTTATAGTAGC+TGG | - | chr1_4:58917314-58917333 | Msa0173590:intron | 35.0% | |
ATTAACCTCTAGCAAATGCA+AGG | + | chr1_4:58917345-58917364 | None:intergenic | 35.0% | |
AATTCCAACACTCTAATCTG+TGG | - | chr1_4:58917362-58917381 | Msa0173590:intron | 35.0% | |
!! | AAACTCAAAGCATTGTGTCA+CGG | - | chr1_4:58917404-58917423 | Msa0173590:intron | 35.0% |
!! | TTTCTTGCTTTTGATGAGTG+GGG | - | chr1_4:58917590-58917609 | Msa0173590:CDS | 35.0% |
! | TGGTTCTATACTCGTAAAAG+AGG | + | chr1_4:58917704-58917723 | None:intergenic | 35.0% |
! | TAACTAAAGCACTTGAAGAG+GGG | + | chr1_4:58917789-58917808 | None:intergenic | 35.0% |
! | CTTAACTAAAGCACTTGAAG+AGG | + | chr1_4:58917791-58917810 | None:intergenic | 35.0% |
TCAAGTGCTTTAGTTAAGCA+AGG | - | chr1_4:58917793-58917812 | Msa0173590:intron | 35.0% | |
TGCTTTAGTTAAGCAAGGAA+AGG | - | chr1_4:58917798-58917817 | Msa0173590:intron | 35.0% | |
! | TATGCCACAGAATTTCGTTT+TGG | - | chr1_4:58917857-58917876 | Msa0173590:intron | 35.0% |
TTTGCACTGCTATGATTAAC+TGG | - | chr1_4:58917998-58918017 | Msa0173590:intron | 35.0% | |
GGAAGTCAGATAACTTGATT+GGG | + | chr1_4:58918037-58918056 | None:intergenic | 35.0% | |
AGGAAGTCAGATAACTTGAT+TGG | + | chr1_4:58918038-58918057 | None:intergenic | 35.0% | |
TCAAGTTATCTGACTTCCTA+AGG | - | chr1_4:58918039-58918058 | Msa0173590:intron | 35.0% | |
GAAAAAGAAACCTCCACAAA+AGG | + | chr1_4:58918149-58918168 | None:intergenic | 35.0% | |
! | GGAGGTTTCTTTTTCTTCAT+TGG | - | chr1_4:58918154-58918173 | Msa0173590:CDS | 35.0% |
!! | TTTGAGAGTATTGCAAAGAC+GGG | + | chr1_4:58918273-58918292 | None:intergenic | 35.0% |
! | TCTTTATTTGGAAGTCAGGA+GGG | + | chr1_4:58918414-58918433 | None:intergenic | 35.0% |
ATGCATTAAAGGTCTAGTAG+TGG | - | chr1_4:58918442-58918461 | Msa0173590:intron | 35.0% | |
AATAAACCATGTGAAAGCGA+TGG | + | chr1_4:58918482-58918501 | None:intergenic | 35.0% | |
TTGCCATGACAGTGAAAATT+AGG | + | chr1_4:58918508-58918527 | None:intergenic | 35.0% | |
TGATGTTGCATCACTTTACA+CGG | + | chr1_4:58918675-58918694 | None:intergenic | 35.0% | |
! | AAAGCGTGCTCTAGATAAAA+AGG | - | chr1_4:58918731-58918750 | Msa0173590:CDS | 35.0% |
AGCTGGAAAAAGTAAGAACA+AGG | + | chr1_4:58918982-58919001 | None:intergenic | 35.0% | |
GAGCTTCGAAATGCTAATAA+TGG | - | chr1_4:58919027-58919046 | Msa0173590:intron | 35.0% | |
GGCATATTGGAAAACCAAAA+TGG | - | chr1_4:58919048-58919067 | Msa0173590:intron | 35.0% | |
!! | TTTCAAGAAGCATTATGCCA+CGG | - | chr1_4:58919098-58919117 | Msa0173590:intron | 35.0% |
ACCTTGAAGCAACATTTGAT+TGG | - | chr1_4:58919201-58919220 | Msa0173590:intron | 35.0% | |
CCTTGAAGCAACATTTGATT+GGG | - | chr1_4:58919202-58919221 | Msa0173590:intron | 35.0% | |
! | AAGCCCAAAGCAAATTTTGA+TGG | - | chr1_4:58919307-58919326 | Msa0173590:intron | 35.0% |
! | TGGCCATCAAAATTTGCTTT+GGG | + | chr1_4:58919313-58919332 | None:intergenic | 35.0% |
! | ATGGCCATCAAAATTTGCTT+TGG | + | chr1_4:58919314-58919333 | None:intergenic | 35.0% |
ATAGAACTATCCGACATACT+AGG | + | chr1_4:58919346-58919365 | None:intergenic | 35.0% | |
ATAATGACTGACTGCAAAAC+CGG | + | chr1_4:58919484-58919503 | None:intergenic | 35.0% | |
! | ATCTTGTTTCCTCCCTATTT+CGG | - | chr1_4:58919530-58919549 | Msa0173590:CDS | 35.0% |
ACATAATTGCATGGTGTTCA+AGG | + | chr1_4:58919721-58919740 | None:intergenic | 35.0% | |
TTTAGCTGGACATAATTGCA+TGG | + | chr1_4:58919730-58919749 | None:intergenic | 35.0% | |
TATGTCAAAGGTTCTTTAGC+TGG | + | chr1_4:58919744-58919763 | None:intergenic | 35.0% | |
TCAGAATCTTTGTGCAGTTT+CGG | + | chr1_4:58919987-58920006 | None:intergenic | 35.0% | |
!! | TCTTTTTGAAGAGTATGCCA+AGG | + | chr1_4:58920144-58920163 | None:intergenic | 35.0% |
!!! | AGTTTTGAACAGCACATCTT+TGG | - | chr1_4:58920163-58920182 | Msa0173590:intron | 35.0% |
!! | GTTTTGAACAGCACATCTTT+GGG | - | chr1_4:58920164-58920183 | Msa0173590:intron | 35.0% |
! | TTTTGAACAGCACATCTTTG+GGG | - | chr1_4:58920165-58920184 | Msa0173590:intron | 35.0% |
TATATTCAAGAATGGGGAAG+AGG | + | chr1_4:58920269-58920288 | None:intergenic | 35.0% | |
CAGAGAAATTCAAATGTGCA+TGG | - | chr1_4:58920463-58920482 | Msa0173590:intron | 35.0% | |
ACAAAGGGTAGATAGATAAC+CGG | + | chr1_4:58920744-58920763 | None:intergenic | 35.0% | |
TTATGTAGCCTTCACACAAA+GGG | + | chr1_4:58920759-58920778 | None:intergenic | 35.0% | |
ATTATGTAGCCTTCACACAA+AGG | + | chr1_4:58920760-58920779 | None:intergenic | 35.0% | |
GCCGCGAAACTTGAATATAA+AGG | + | chr1_4:58909178-58909197 | None:intergenic | 40.0% | |
GAGAGAGAAAGAGAGAGATA+GGG | + | chr1_4:58909220-58909239 | None:intergenic | 40.0% | |
AGAGAGAGAAAGAGAGAGAT+AGG | + | chr1_4:58909221-58909240 | None:intergenic | 40.0% | |
GGAGAGAGAAAACAAGAGAA+AGG | + | chr1_4:58909254-58909273 | None:intergenic | 40.0% | |
TCTTGGATCTGTAAGCTACT+AGG | - | chr1_4:58909328-58909347 | Msa0173590:three_prime_UTR | 40.0% | |
CTTGGATCTGTAAGCTACTA+GGG | - | chr1_4:58909329-58909348 | Msa0173590:three_prime_UTR | 40.0% | |
! | TGCGATTGTGAGAAGTTTTG+TGG | - | chr1_4:58909637-58909656 | Msa0173590:CDS | 40.0% |
!! | GCATCAGAAAAGTGTTATGC+TGG | - | chr1_4:58909962-58909981 | Msa0173590:intron | 40.0% |
TAGGTCAGTGGTATGTATAG+AGG | + | chr1_4:58910394-58910413 | None:intergenic | 40.0% | |
!! | AGAGTTTTAGTGGTAGCTCT+TGG | - | chr1_4:58910784-58910803 | Msa0173590:CDS | 40.0% |
! | AAACTATGTTGCATCGGTAC+AGG | - | chr1_4:58910864-58910883 | Msa0173590:intron | 40.0% |
GATGCATGGATACTCCAAAT+TGG | + | chr1_4:58911227-58911246 | None:intergenic | 40.0% | |
ATGCTCAGCGCATACTATAA+TGG | + | chr1_4:58911268-58911287 | None:intergenic | 40.0% | |
GCATGGTAAAGATTGGAAGA+AGG | - | chr1_4:58911422-58911441 | Msa0173590:CDS | 40.0% | |
AAGAGCTTCCACCATTTCAA+TGG | + | chr1_4:58911635-58911654 | None:intergenic | 40.0% | |
GCATATCTATCTCTACCAGA+GGG | - | chr1_4:58911924-58911943 | Msa0173590:intron | 40.0% | |
CATATCTATCTCTACCAGAG+GGG | - | chr1_4:58911925-58911944 | Msa0173590:intron | 40.0% | |
GATCTGTCATCATTGCAATG+AGG | + | chr1_4:58911968-58911987 | None:intergenic | 40.0% | |
AGTTGCTGAGGAAATAGAGA+TGG | + | chr1_4:58912215-58912234 | None:intergenic | 40.0% | |
TAATGTCAGGATAGTTGCTG+AGG | + | chr1_4:58912227-58912246 | None:intergenic | 40.0% | |
! | AGGAAGAGAGTGATAGTGAA+AGG | - | chr1_4:58912371-58912390 | Msa0173590:CDS | 40.0% |
! | GGAAGAGAGTGATAGTGAAA+GGG | - | chr1_4:58912372-58912391 | Msa0173590:CDS | 40.0% |
! | TTTTCACGCTTTCGTTTCAC+AGG | + | chr1_4:58912427-58912446 | None:intergenic | 40.0% |
! | GTCTTTTCTTCAGTAGAGAG+AGG | + | chr1_4:58912513-58912532 | None:intergenic | 40.0% |
CTGAAGAAAAGACGCATTGA+TGG | - | chr1_4:58912520-58912539 | Msa0173590:intron | 40.0% | |
AAAAACCCAATTCCCTGATG+AGG | + | chr1_4:58912583-58912602 | None:intergenic | 40.0% | |
! | TCATCAGGGAATTGGGTTTT+TGG | - | chr1_4:58912582-58912601 | Msa0173590:intron | 40.0% |
ACAAACAGCTGTACAAACAC+AGG | + | chr1_4:58912855-58912874 | None:intergenic | 40.0% | |
!!! | TCTGAAGTTTTGGGTGGAAA+AGG | + | chr1_4:58912966-58912985 | None:intergenic | 40.0% |
GTTAGTTGTGCTTGTATTCC+TGG | - | chr1_4:58913076-58913095 | Msa0173590:CDS | 40.0% | |
CTGTGTAAGATATTCTGCAC+TGG | - | chr1_4:58913115-58913134 | Msa0173590:CDS | 40.0% | |
! | GCACTGGATTGTAGTATTGA+TGG | - | chr1_4:58913131-58913150 | Msa0173590:CDS | 40.0% |
AGCTTGAAGTCTACTGTTGA+TGG | - | chr1_4:58913271-58913290 | Msa0173590:CDS | 40.0% | |
ATGTGGTGTCTGAGAAACTA+GGG | + | chr1_4:58913362-58913381 | None:intergenic | 40.0% | |
TATGTGGTGTCTGAGAAACT+AGG | + | chr1_4:58913363-58913382 | None:intergenic | 40.0% | |
TAGTTTCTCAGACACCACAT+AGG | - | chr1_4:58913362-58913381 | Msa0173590:intron | 40.0% | |
! | TTCTGTGGATGGAGAGTTTT+TGG | - | chr1_4:58913635-58913654 | Msa0173590:intron | 40.0% |
! | AGTTCCTTGATGGATATGGA+AGG | - | chr1_4:58913711-58913730 | Msa0173590:CDS | 40.0% |
!! | AATTATCAGCTTGATGACGG+AGG | - | chr1_4:58913804-58913823 | Msa0173590:CDS | 40.0% |
!!! | TTCTTTTCCGCTGACTTGTT+GGG | + | chr1_4:58913923-58913942 | None:intergenic | 40.0% |
!!! | TTTCTTTTCCGCTGACTTGT+TGG | + | chr1_4:58913924-58913943 | None:intergenic | 40.0% |
TGACAGAATTACCTCCAAAG+AGG | + | chr1_4:58913956-58913975 | None:intergenic | 40.0% | |
TCTGTCAATAGGGATGTCTT+TGG | - | chr1_4:58913969-58913988 | Msa0173590:intron | 40.0% | |
! | CAAAGTTTGCAAAGCATCCA+AGG | + | chr1_4:58914139-58914158 | None:intergenic | 40.0% |
CTTGGATGCTTTGCAAACTT+TGG | - | chr1_4:58914137-58914156 | Msa0173590:intron | 40.0% | |
CCAGATTCTACTTCAGAAGA+CGG | + | chr1_4:58914183-58914202 | None:intergenic | 40.0% | |
TGTGTCTTAGAATTGGGGTT+GGG | - | chr1_4:58914231-58914250 | Msa0173590:intron | 40.0% | |
!! | GTCCCGTTTTGGATAAGATA+TGG | + | chr1_4:58914300-58914319 | None:intergenic | 40.0% |
CACACACAAAACTAGACATC+TGG | - | chr1_4:58914359-58914378 | Msa0173590:intron | 40.0% | |
! | AAAACTAGACATCTGGAGTG+TGG | - | chr1_4:58914366-58914385 | Msa0173590:intron | 40.0% |
! | AAACTAGACATCTGGAGTGT+GGG | - | chr1_4:58914367-58914386 | Msa0173590:intron | 40.0% |
GCACAACCCAAAATCAAAGA+TGG | + | chr1_4:58914436-58914455 | None:intergenic | 40.0% | |
TTAACACTACCCTACAAAGC+CGG | - | chr1_4:58914456-58914475 | Msa0173590:intron | 40.0% | |
!! | GTCCCGTTTTGGATAAGATA+TGG | + | chr1_4:58914300-58914319 | None:intergenic | 40.0% |
!!! | TTGAGAGGTTTAGTTTTGGG+GGG | + | chr1_4:58914589-58914608 | None:intergenic | 40.0% |
!! | CGCATTGAGAGGTTTAGTTT+TGG | + | chr1_4:58914593-58914612 | None:intergenic | 40.0% |
AAACTAAACCTCTCAATGCG+AGG | - | chr1_4:58914593-58914612 | Msa0173590:intron | 40.0% | |
!! | GTCCCGTTTTGGATAAGATA+TGG | + | chr1_4:58914300-58914319 | None:intergenic | 40.0% |
!!! | ACTCCAGATGTCTAGTTTTG+GGG | + | chr1_4:58914365-58914384 | None:intergenic | 40.0% |
!!! | CACTCCAGATGTCTAGTTTT+GGG | + | chr1_4:58914366-58914385 | None:intergenic | 40.0% |
!! | ACACTCCAGATGTCTAGTTT+TGG | + | chr1_4:58914367-58914386 | None:intergenic | 40.0% |
! | AAAACTAGACATCTGGAGTG+TGG | - | chr1_4:58914366-58914385 | Msa0173590:intron | 40.0% |
! | AAACTAGACATCTGGAGTGT+GGG | - | chr1_4:58914367-58914386 | Msa0173590:intron | 40.0% |
GCACAACCCAAAATCAAAGA+TGG | + | chr1_4:58914436-58914455 | None:intergenic | 40.0% | |
AAACTTCTCACCTTACAAGC+TGG | + | chr1_4:58914823-58914842 | None:intergenic | 40.0% | |
AAGCCACATCTCATCCAATA+TGG | - | chr1_4:58914866-58914885 | Msa0173590:CDS | 40.0% | |
AGCCACATCTCATCCAATAT+GGG | - | chr1_4:58914867-58914886 | Msa0173590:CDS | 40.0% | |
GGACTTCTCAACATAACTGT+AGG | - | chr1_4:58914888-58914907 | Msa0173590:CDS | 40.0% | |
TGAGACACAAATACAGAGAG+AGG | - | chr1_4:58914941-58914960 | Msa0173590:CDS | 40.0% | |
GAGACACAAATACAGAGAGA+GGG | - | chr1_4:58914942-58914961 | Msa0173590:CDS | 40.0% | |
AGACACAAATACAGAGAGAG+GGG | - | chr1_4:58914943-58914962 | Msa0173590:CDS | 40.0% | |
TCATTCTTTCTCCCTTCAAC+TGG | + | chr1_4:58915064-58915083 | None:intergenic | 40.0% | |
GTTGAAGGGAGAAAGAATGA+TGG | - | chr1_4:58915064-58915083 | Msa0173590:intron | 40.0% | |
!! | TGGCTTGTTGATGTTGATTC+GGG | + | chr1_4:58915116-58915135 | None:intergenic | 40.0% |
TATACTTGCCTTTGACACAG+TGG | + | chr1_4:58915288-58915307 | None:intergenic | 40.0% | |
! | CGCACATTTTGTGTTGTGTT+TGG | - | chr1_4:58915332-58915351 | Msa0173590:intron | 40.0% |
!! | TTTTCAAGGAGATTATGGGG+TGG | - | chr1_4:58915678-58915697 | Msa0173590:intron | 40.0% |
TGGCGTTGCATATATAAGCA+TGG | + | chr1_4:58915715-58915734 | None:intergenic | 40.0% | |
TGTGGTTCAACCAACAACAA+AGG | + | chr1_4:58915877-58915896 | None:intergenic | 40.0% | |
! | GTTGTTGGTTGAACCACATT+CGG | - | chr1_4:58915879-58915898 | Msa0173590:intron | 40.0% |
TGGTGAGGCAAAAACTTGAT+CGG | + | chr1_4:58916188-58916207 | None:intergenic | 40.0% | |
!! | CTCTGCATTCTAAAGCTTTG+AGG | - | chr1_4:58916455-58916474 | Msa0173590:CDS | 40.0% |
!! | CTGCATTCTAAAGCTTTGAG+GGG | - | chr1_4:58916457-58916476 | Msa0173590:CDS | 40.0% |
!! | TAAAGCTTTGAGGGGATTCA+AGG | - | chr1_4:58916465-58916484 | Msa0173590:CDS | 40.0% |
! | CATCTTATTTGGTTCGCAGA+TGG | - | chr1_4:58916555-58916574 | Msa0173590:intron | 40.0% |
! | AACAGTATCGAGAATCAGTG+AGG | - | chr1_4:58916885-58916904 | Msa0173590:CDS | 40.0% |
GGAAACATTATTCTGAGCTG+CGG | - | chr1_4:58916906-58916925 | Msa0173590:CDS | 40.0% | |
! | AGATGGACTTCCAACAGATT+TGG | - | chr1_4:58916940-58916959 | Msa0173590:intron | 40.0% |
! | AATGGTCTTGCCAAATCTGT+TGG | + | chr1_4:58916953-58916972 | None:intergenic | 40.0% |
ACTGAATTCTGCACTTGTCA+TGG | + | chr1_4:58917051-58917070 | None:intergenic | 40.0% | |
GTGCATAGAAGAATAGCACA+AGG | + | chr1_4:58917271-58917290 | None:intergenic | 40.0% | |
! | CATTACCTTGCATTTGCTAG+AGG | - | chr1_4:58917337-58917356 | Msa0173590:intron | 40.0% |
GTTTCTAACGAGTAACCAAG+AGG | + | chr1_4:58917388-58917407 | None:intergenic | 40.0% | |
!!! | ATGAGTGGGGTTTTTTGTTC+AGG | - | chr1_4:58917603-58917622 | Msa0173590:CDS | 40.0% |
GCTTCGGGCATATTATCTAA+TGG | + | chr1_4:58917652-58917671 | None:intergenic | 40.0% | |
ATAATATGCCCGAAGCTTTG+AGG | - | chr1_4:58917656-58917675 | Msa0173590:CDS | 40.0% | |
! | ACTCGTAAAAGAGGCTTTTC+TGG | + | chr1_4:58917695-58917714 | None:intergenic | 40.0% |
AGCACCAAAACGAAATTCTG+TGG | + | chr1_4:58917864-58917883 | None:intergenic | 40.0% | |
! | GTTCCTTTCCTTTTGCCTAA+TGG | - | chr1_4:58917948-58917967 | Msa0173590:intron | 40.0% |
TGTCCATTAGGCAAAAGGAA+AGG | + | chr1_4:58917954-58917973 | None:intergenic | 40.0% | |
TATGTCAAGGCTTGTCCATT+AGG | + | chr1_4:58917966-58917985 | None:intergenic | 40.0% | |
!! | TGACTTCCTAAGGCTTTGTT+TGG | - | chr1_4:58918049-58918068 | Msa0173590:intron | 40.0% |
!! | GACTTCCTAAGGCTTTGTTT+GGG | - | chr1_4:58918050-58918069 | Msa0173590:intron | 40.0% |
AAACTCCCAAACAAAGCCTT+AGG | + | chr1_4:58918058-58918077 | None:intergenic | 40.0% | |
!! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr1_4:58918057-58918076 | Msa0173590:intron | 40.0% |
TTTGGAGGGGAATGAATAAG+AGG | - | chr1_4:58918075-58918094 | Msa0173590:intron | 40.0% | |
GGAATGAATAAGAGGCTTAG+AGG | - | chr1_4:58918083-58918102 | Msa0173590:intron | 40.0% | |
AGAGGCTTAGAGGATTAAGT+AGG | - | chr1_4:58918093-58918112 | Msa0173590:intron | 40.0% | |
AGAGGATTAAGTAGGAGGAA+AGG | - | chr1_4:58918101-58918120 | Msa0173590:intron | 40.0% | |
GAGGATTAAGTAGGAGGAAA+GGG | - | chr1_4:58918102-58918121 | Msa0173590:intron | 40.0% | |
AGGATTAAGTAGGAGGAAAG+GGG | - | chr1_4:58918103-58918122 | Msa0173590:intron | 40.0% | |
AAGAAACCTCCACAAAAGGT+GGG | + | chr1_4:58918145-58918164 | None:intergenic | 40.0% | |
AAAGAAACCTCCACAAAAGG+TGG | + | chr1_4:58918146-58918165 | None:intergenic | 40.0% | |
TGGATCAAAACCCTCCAATA+TGG | - | chr1_4:58918174-58918193 | Msa0173590:CDS | 40.0% | |
ATCAAAACCCTCCAATATGG+AGG | - | chr1_4:58918177-58918196 | Msa0173590:intron | 40.0% | |
TTGAGATCCTCCATATTGGA+GGG | + | chr1_4:58918187-58918206 | None:intergenic | 40.0% | |
! | TTTGAGATCCTCCATATTGG+AGG | + | chr1_4:58918188-58918207 | None:intergenic | 40.0% |
!! | ATGACTTTGGAGAGTTTTGG+AGG | - | chr1_4:58918222-58918241 | Msa0173590:intron | 40.0% |
!!! | TGACTTTGGAGAGTTTTGGA+GGG | - | chr1_4:58918223-58918242 | Msa0173590:intron | 40.0% |
!!! | TTAGAATAGTGTTTTGGGGG+AGG | + | chr1_4:58918327-58918346 | None:intergenic | 40.0% |
!! | GAAAGGGCTTTAGAAGCAAA+AGG | + | chr1_4:58918392-58918411 | None:intergenic | 40.0% |
! | GTCTTTATTTGGAAGTCAGG+AGG | + | chr1_4:58918415-58918434 | None:intergenic | 40.0% |
AATCTTCCATCGCTTTCACA+TGG | - | chr1_4:58918473-58918492 | Msa0173590:CDS | 40.0% | |
AGCACAGAGGTTACCAATAT+TGG | + | chr1_4:58918634-58918653 | None:intergenic | 40.0% | |
AACAAGGCCATATCTAACCA+AGG | + | chr1_4:58918966-58918985 | None:intergenic | 40.0% | |
! | CCCAATCAAATGTTGCTTCA+AGG | + | chr1_4:58919205-58919224 | None:intergenic | 40.0% |
CTGATACCATGCTTCAATTG+AGG | - | chr1_4:58919242-58919261 | Msa0173590:intron | 40.0% | |
ACATACTAGGAAGGTCATCA+TGG | + | chr1_4:58919333-58919352 | None:intergenic | 40.0% | |
TGATGACCTTCCTAGTATGT+CGG | - | chr1_4:58919333-58919352 | Msa0173590:intron | 40.0% | |
AACTATCCGACATACTAGGA+AGG | + | chr1_4:58919342-58919361 | None:intergenic | 40.0% | |
GTTCTATGACACAAGAGTCT+AGG | - | chr1_4:58919359-58919378 | Msa0173590:intron | 40.0% | |
AAGAACAGAAAAATGCTCCC+AGG | + | chr1_4:58919559-58919578 | None:intergenic | 40.0% | |
TGATCTTGAGACCTTATCAC+AGG | + | chr1_4:58919888-58919907 | None:intergenic | 40.0% | |
AGGTCTCAAGATCAAGTGAA+TGG | - | chr1_4:58919894-58919913 | Msa0173590:intron | 40.0% | |
CCAGATGCATCGTTAAGTAA+AGG | + | chr1_4:58919963-58919982 | None:intergenic | 40.0% | |
CCTTTACTTAACGATGCATC+TGG | - | chr1_4:58919960-58919979 | Msa0173590:intron | 40.0% | |
CATGAAGTGATGAGCTCAAA+TGG | + | chr1_4:58920029-58920048 | None:intergenic | 40.0% | |
GGCTACATTAACCATGATTC+AGG | - | chr1_4:58920052-58920071 | Msa0173590:intron | 40.0% | |
CGAATGGGAAGTTGTGAAAT+AGG | + | chr1_4:58920102-58920121 | None:intergenic | 40.0% | |
TTTGAACAGCACATCTTTGG+GGG | - | chr1_4:58920166-58920185 | Msa0173590:intron | 40.0% | |
ACTTGCAGAGTTGTACTGAA+CGG | - | chr1_4:58920354-58920373 | Msa0173590:intron | 40.0% | |
AGGGATGAGAGCTAAAATCT+GGG | + | chr1_4:58920501-58920520 | None:intergenic | 40.0% | |
TAGGGATGAGAGCTAAAATC+TGG | + | chr1_4:58920502-58920521 | None:intergenic | 40.0% | |
TACAGATTAAGTAAGGGGCA+AGG | + | chr1_4:58920604-58920623 | None:intergenic | 40.0% | |
GAATCCAAGAGCTACTGAAT+AGG | - | chr1_4:58920706-58920725 | Msa0173590:intron | 40.0% | |
TCTATCTACCCTTTGTGTGA+AGG | - | chr1_4:58920748-58920767 | Msa0173590:intron | 40.0% | |
! | GACTATGCAGCTCTTTAGAA+AGG | + | chr1_4:58920849-58920868 | None:intergenic | 40.0% |
CAAGAGTGAAAGTGATTCCG+CGG | + | chr1_4:58909313-58909332 | None:intergenic | 45.0% | |
AACATGAAGGCTTAGGTCAG+TGG | + | chr1_4:58910406-58910425 | None:intergenic | 45.0% | |
! | GTTGCATCGGTACAGGAATT+TGG | - | chr1_4:58910871-58910890 | Msa0173590:intron | 45.0% |
AGAGAGGAAATTCGGGAGAA+TGG | - | chr1_4:58911047-58911066 | Msa0173590:CDS | 45.0% | |
! | GAAATTCGGGAGAATGGACT+TGG | - | chr1_4:58911053-58911072 | Msa0173590:CDS | 45.0% |
GGCATATCTATCTCTACCAG+AGG | - | chr1_4:58911923-58911942 | Msa0173590:intron | 45.0% | |
TATCTTGTTCTTTGCCCCGA+TGG | - | chr1_4:58912160-58912179 | Msa0173590:intron | 45.0% | |
!! | TGTTGAGATGGGTTGGTTTC+TGG | - | chr1_4:58912296-58912315 | Msa0173590:intron | 45.0% |
!! | GTTGAGATGGGTTGGTTTCT+GGG | - | chr1_4:58912297-58912316 | Msa0173590:intron | 45.0% |
!! | TTGAGATGGGTTGGTTTCTG+GGG | - | chr1_4:58912298-58912317 | Msa0173590:intron | 45.0% |
TTTCTGTACCTGACATCGAC+AGG | - | chr1_4:58912351-58912370 | Msa0173590:CDS | 45.0% | |
!! | TTCACAGGTTTTCGAGATCC+TGG | + | chr1_4:58912412-58912431 | None:intergenic | 45.0% |
TGGAAGTAACAGACTGAGAC+TGG | + | chr1_4:58912480-58912499 | None:intergenic | 45.0% | |
! | CAGTCTGTTACTTCCAGTGA+TGG | - | chr1_4:58912484-58912503 | Msa0173590:intron | 45.0% |
GCTGCACAGTCAGTTAGTTA+TGG | - | chr1_4:58912722-58912741 | Msa0173590:intron | 45.0% | |
TTAAGCAGGGCTTCACAAAG+AGG | - | chr1_4:58913328-58913347 | Msa0173590:intron | 45.0% | |
TGTGGTGTCTGAGAAACTAG+GGG | + | chr1_4:58913361-58913380 | None:intergenic | 45.0% | |
TTCTGTTCTCCTCTCCTATG+TGG | + | chr1_4:58913379-58913398 | None:intergenic | 45.0% | |
!! | CACAGAAGCATCGAGAAACT+TGG | + | chr1_4:58913622-58913641 | None:intergenic | 45.0% |
CAAGTTTCTCGATGCTTCTG+TGG | - | chr1_4:58913620-58913639 | Msa0173590:intron | 45.0% | |
TTTCTCGATGCTTCTGTGGA+TGG | - | chr1_4:58913624-58913643 | Msa0173590:intron | 45.0% | |
!! | GTGGATGGAGAGTTTTTGGA+AGG | - | chr1_4:58913639-58913658 | Msa0173590:intron | 45.0% |
! | TGGAAGGTAGTCTTGAAAGC+AGG | - | chr1_4:58913655-58913674 | Msa0173590:intron | 45.0% |
! | GGAAGGTAGTCTTGAAAGCA+GGG | - | chr1_4:58913656-58913675 | Msa0173590:intron | 45.0% |
! | GAAGGTAGTCTTGAAAGCAG+GGG | - | chr1_4:58913657-58913676 | Msa0173590:intron | 45.0% |
CGTTCCTTCCATATCCATCA+AGG | + | chr1_4:58913718-58913737 | None:intergenic | 45.0% | |
AATTCTCCCCAACAAGTCAG+CGG | - | chr1_4:58913913-58913932 | Msa0173590:CDS | 45.0% | |
!!! | TCTTTTCCGCTGACTTGTTG+GGG | + | chr1_4:58913922-58913941 | None:intergenic | 45.0% |
GTCAATAGGGATGTCTTTGG+AGG | - | chr1_4:58913972-58913991 | Msa0173590:intron | 45.0% | |
CCTAAGGTTAAGGCAGGAAA+AGG | + | chr1_4:58914003-58914022 | None:intergenic | 45.0% | |
! | CCTTTTCCTGCCTTAACCTT+AGG | - | chr1_4:58914000-58914019 | Msa0173590:intron | 45.0% |
TTATGGCCTAAGGTTAAGGC+AGG | + | chr1_4:58914009-58914028 | None:intergenic | 45.0% | |
AACAGATGAAATCCACGCCT+TGG | - | chr1_4:58914119-58914138 | Msa0173590:intron | 45.0% | |
!! | CCGTCTTCTGAAGTAGAATC+TGG | - | chr1_4:58914180-58914199 | Msa0173590:intron | 45.0% |
CTGTGTCTTAGAATTGGGGT+TGG | - | chr1_4:58914230-58914249 | Msa0173590:intron | 45.0% | |
!!! | TCCAGATGTCTAGTTTTGGG+GGG | + | chr1_4:58914708-58914727 | None:intergenic | 45.0% |
!!! | CTCCAGATGTCTAGTTTTGG+GGG | + | chr1_4:58914709-58914728 | None:intergenic | 45.0% |
!! | CCTTACAAGCTGGCTTTGTA+GGG | + | chr1_4:58914813-58914832 | None:intergenic | 45.0% |
!! | ACCTTACAAGCTGGCTTTGT+AGG | + | chr1_4:58914814-58914833 | None:intergenic | 45.0% |
GTCCCATATTGGATGAGATG+TGG | + | chr1_4:58914872-58914891 | None:intergenic | 45.0% | |
GACACAAATACAGAGAGAGG+GGG | - | chr1_4:58914944-58914963 | Msa0173590:CDS | 45.0% | |
ACACAAATACAGAGAGAGGG+GGG | - | chr1_4:58914945-58914964 | Msa0173590:CDS | 45.0% | |
ACTGGAGACGTGATTCTAGA+CGG | + | chr1_4:58915046-58915065 | None:intergenic | 45.0% | |
AGAATCACGTCTCCAGTTGA+AGG | - | chr1_4:58915049-58915068 | Msa0173590:CDS | 45.0% | |
GAATCACGTCTCCAGTTGAA+GGG | - | chr1_4:58915050-58915069 | Msa0173590:intron | 45.0% | |
GCAAAAGTCCACTGTGTCAA+AGG | - | chr1_4:58915277-58915296 | Msa0173590:intron | 45.0% | |
AGATTATGGGGTGGATGCAT+AGG | - | chr1_4:58915687-58915706 | Msa0173590:intron | 45.0% | |
! | CAAAATGTAGGTGATGGCTG+TGG | + | chr1_4:58915735-58915754 | None:intergenic | 45.0% |
! | CAGCCATCACCTACATTTTG+TGG | - | chr1_4:58915735-58915754 | Msa0173590:intron | 45.0% |
GAATAGAGCGAAGAGAGACA+GGG | + | chr1_4:58915907-58915926 | None:intergenic | 45.0% | |
AGAATAGAGCGAAGAGAGAC+AGG | + | chr1_4:58915908-58915927 | None:intergenic | 45.0% | |
! | AGCTGTTTCACGTTCTCTGT+AGG | - | chr1_4:58916120-58916139 | Msa0173590:intron | 45.0% |
AAAGACGGTCAAACCTTCTG+AGG | - | chr1_4:58916216-58916235 | Msa0173590:CDS | 45.0% | |
! | TTACTGCGTGCTGATCAGAA+AGG | - | chr1_4:58916241-58916260 | Msa0173590:CDS | 45.0% |
GACTTCTCTTTACGCATGGA+TGG | + | chr1_4:58916358-58916377 | None:intergenic | 45.0% | |
! | TTGGACTAGGGAATATCCCA+AGG | - | chr1_4:58916657-58916676 | Msa0173590:intron | 45.0% |
!! | ACTCAACACGAGTTAGCCTT+GGG | + | chr1_4:58916676-58916695 | None:intergenic | 45.0% |
ACAGCACTGCAATGTCAAGT+AGG | + | chr1_4:58916789-58916808 | None:intergenic | 45.0% | |
!! | ACTTGTTTCTGCAGTTCCCT+TGG | - | chr1_4:58916809-58916828 | Msa0173590:CDS | 45.0% |
!!! | CTCTCTTGTTTTGGGGTGAA+TGG | + | chr1_4:58916999-58917018 | None:intergenic | 45.0% |
TATGCACGGTATCCAGAGAA+AGG | - | chr1_4:58917284-58917303 | Msa0173590:intron | 45.0% | |
AGAAAGGTCTGACCCATTCT+TGG | - | chr1_4:58917300-58917319 | Msa0173590:intron | 45.0% | |
AATCTGCCTCCTCAAAGCTT+CGG | + | chr1_4:58917668-58917687 | None:intergenic | 45.0% | |
AATGCATGCTTCACCTGTGA+AGG | - | chr1_4:58917759-58917778 | Msa0173590:intron | 45.0% | |
AGGCTTGTCCATTAGGCAAA+AGG | + | chr1_4:58917959-58917978 | None:intergenic | 45.0% | |
!! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr1_4:58918061-58918080 | Msa0173590:intron | 45.0% |
! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr1_4:58918062-58918081 | Msa0173590:intron | 45.0% |
GGCTTAGAGGATTAAGTAGG+AGG | - | chr1_4:58918096-58918115 | Msa0173590:intron | 45.0% | |
TTAAGTAGGAGGAAAGGGGA+AGG | - | chr1_4:58918107-58918126 | Msa0173590:intron | 45.0% | |
TAAGTAGGAGGAAAGGGGAA+GGG | - | chr1_4:58918108-58918127 | Msa0173590:intron | 45.0% | |
AGAAACCTCCACAAAAGGTG+GGG | + | chr1_4:58918144-58918163 | None:intergenic | 45.0% | |
!! | GGGATGACTTTGGAGAGTTT+TGG | - | chr1_4:58918219-58918238 | Msa0173590:intron | 45.0% |
!! | AGAGTATTGCAAAGACGGGA+AGG | + | chr1_4:58918269-58918288 | None:intergenic | 45.0% |
!!! | ATAGTGTTTTGGGGGAGGAT+GGG | + | chr1_4:58918322-58918341 | None:intergenic | 45.0% |
!!! | AATAGTGTTTTGGGGGAGGA+TGG | + | chr1_4:58918323-58918342 | None:intergenic | 45.0% |
TTTGGAAGTCAGGAGGGAAA+GGG | + | chr1_4:58918408-58918427 | None:intergenic | 45.0% | |
ATTTGGAAGTCAGGAGGGAA+AGG | + | chr1_4:58918409-58918428 | None:intergenic | 45.0% | |
! | GAGGTTACCAATATTGGCCT+GGG | + | chr1_4:58918628-58918647 | None:intergenic | 45.0% |
AGAGGTTACCAATATTGGCC+TGG | + | chr1_4:58918629-58918648 | None:intergenic | 45.0% | |
! | CTTTTTCCAGCTGCTCTTAC+AGG | - | chr1_4:58918990-58919009 | Msa0173590:intron | 45.0% |
!! | CTTTAGCTCTACAAGTACCG+TGG | + | chr1_4:58919118-58919137 | None:intergenic | 45.0% |
CACGGTACTTGTAGAGCTAA+AGG | - | chr1_4:58919116-58919135 | Msa0173590:intron | 45.0% | |
GAGGCAACGCAATACCTATA+CGG | - | chr1_4:58919261-58919280 | Msa0173590:intron | 45.0% | |
! | TTTGCTTTGGGCTTCATCCA+TGG | + | chr1_4:58919301-58919320 | None:intergenic | 45.0% |
CATTAAAGGATCCAGGCTAC+AGG | - | chr1_4:58919399-58919418 | Msa0173590:intron | 45.0% | |
AATGCTGGATGCTGCATTTC+AGG | - | chr1_4:58919429-58919448 | Msa0173590:intron | 45.0% | |
! | TGGATGCTGCATTTCAGGTA+TGG | - | chr1_4:58919434-58919453 | Msa0173590:intron | 45.0% |
! | TTTCAGGTATGGATGCTCTG+TGG | - | chr1_4:58919445-58919464 | Msa0173590:intron | 45.0% |
TGGTCTCAAGCTACAAAGGA+AGG | - | chr1_4:58919786-58919805 | Msa0173590:intron | 45.0% | |
TGCTATTACGAAGATTGGGC+AGG | - | chr1_4:58919815-58919834 | Msa0173590:intron | 45.0% | |
TATCACAGGCAACCTGTACT+TGG | + | chr1_4:58919874-58919893 | None:intergenic | 45.0% | |
AGTACAGGTTGCCTGTGATA+AGG | - | chr1_4:58919874-58919893 | Msa0173590:intron | 45.0% | |
TGAGCTCATCACTTCATGTG+TGG | - | chr1_4:58920031-58920050 | Msa0173590:intron | 45.0% | |
!! | GGGCGTGCACCTATTTTAAA+TGG | - | chr1_4:58920186-58920205 | Msa0173590:intron | 45.0% |
AATATCTGAGCCACATCAGC+TGG | + | chr1_4:58920389-58920408 | None:intergenic | 45.0% | |
AGCTCCTATTCAGTAGCTCT+TGG | + | chr1_4:58920713-58920732 | None:intergenic | 45.0% | |
AAGAGCTACTGAATAGGAGC+TGG | - | chr1_4:58920712-58920731 | Msa0173590:intron | 45.0% | |
! | TGTCTAGGAAGGGTGCATTT+AGG | - | chr1_4:58920891-58920910 | Msa0173590:five_prime_UTR | 45.0% |
! | GGTTAAATCGATTCACGGCG+AGG | + | chr1_4:58909275-58909294 | None:intergenic | 50.0% |
CCTACAATCAGTAACAGCCG+CGG | - | chr1_4:58909293-58909312 | Msa0173590:three_prime_UTR | 50.0% | |
CGCGGAATCACTTTCACTCT+TGG | - | chr1_4:58909311-58909330 | Msa0173590:three_prime_UTR | 50.0% | |
!! | AAGGATCAATGGCACCGACA+AGG | - | chr1_4:58910560-58910579 | Msa0173590:intron | 50.0% |
TCTCCTGAGAAAGATGGAGC+TGG | - | chr1_4:58910628-58910647 | Msa0173590:intron | 50.0% | |
ATACAGCACTGCATCCTGCA+TGG | - | chr1_4:58910734-58910753 | Msa0173590:CDS | 50.0% | |
ATTGGGATCTCAGTGGAGCA+AGG | - | chr1_4:58911365-58911384 | Msa0173590:intron | 50.0% | |
TTGGGATCTCAGTGGAGCAA+GGG | - | chr1_4:58911366-58911385 | Msa0173590:intron | 50.0% | |
AGAAGTGAGGTCTGACCATC+GGG | + | chr1_4:58912178-58912197 | None:intergenic | 50.0% | |
CAGAAGTGAGGTCTGACCAT+CGG | + | chr1_4:58912179-58912198 | None:intergenic | 50.0% | |
ACTCTCTTCCTGTCGATGTC+AGG | + | chr1_4:58912362-58912381 | None:intergenic | 50.0% | |
GTAACAGACTGAGACTGGAC+AGG | + | chr1_4:58912475-58912494 | None:intergenic | 50.0% | |
TAGAGAGAGGCAACCATCAC+TGG | + | chr1_4:58912500-58912519 | None:intergenic | 50.0% | |
GCTGTACAAACACAGGCTGA+AGG | + | chr1_4:58912848-58912867 | None:intergenic | 50.0% | |
! | AGCCTCGTGCTGTTGGAAAA+AGG | - | chr1_4:58913176-58913195 | Msa0173590:CDS | 50.0% |
! | GTCCTTTTTCCAACAGCACG+AGG | + | chr1_4:58913181-58913200 | None:intergenic | 50.0% |
TCTCAGACACCACATAGGAG+AGG | - | chr1_4:58913367-58913386 | Msa0173590:intron | 50.0% | |
CACGAGCTGTCTCTGACATT+TGG | + | chr1_4:58913599-58913618 | None:intergenic | 50.0% | |
GAAAGCAGGGGAGCTGAAAA+TGG | - | chr1_4:58913669-58913688 | Msa0173590:intron | 50.0% | |
AGCACTGCTGGAGTTCCTAA+GGG | - | chr1_4:58913738-58913757 | Msa0173590:CDS | 50.0% | |
! | TTTGCAAAGCATCCAAGGCG+TGG | + | chr1_4:58914134-58914153 | None:intergenic | 50.0% |
! | TGTGTTGAGAGGTCCCGTTT+TGG | + | chr1_4:58914311-58914330 | None:intergenic | 50.0% |
TGGCTCAGTGGATGTTGGAT+AGG | - | chr1_4:58914401-58914420 | Msa0173590:intron | 50.0% | |
GGCTCAGTGGATGTTGGATA+GGG | - | chr1_4:58914402-58914421 | Msa0173590:intron | 50.0% | |
! | CATTGCAAGCCGGCTTTGTA+GGG | + | chr1_4:58914468-58914487 | None:intergenic | 50.0% |
! | TGTGTTGAGAGGTCCCGTTT+TGG | + | chr1_4:58914311-58914330 | None:intergenic | 50.0% |
GTGTGTGTGTGTGTGTTGAG+AGG | + | chr1_4:58914549-58914568 | None:intergenic | 50.0% | |
! | TGTGTTGAGAGGTCCCGTTT+TGG | + | chr1_4:58914311-58914330 | None:intergenic | 50.0% |
ACCCCCCAAAACTAGACATC+TGG | - | chr1_4:58914704-58914723 | Msa0173590:intron | 50.0% | |
TGGCTCAGTGGATGTTGGAT+AGG | - | chr1_4:58914401-58914420 | Msa0173590:intron | 50.0% | |
GGCTCAGTGGATGTTGGATA+GGG | - | chr1_4:58914402-58914421 | Msa0173590:intron | 50.0% | |
CCCTACAAAGCCAGCTTGTA+AGG | - | chr1_4:58914810-58914829 | Msa0173590:intron | 50.0% | |
CTGGAGACGTGATTCTAGAC+GGG | + | chr1_4:58915045-58915064 | None:intergenic | 50.0% | |
TTGGGCGCACATTCGTTAAG+TGG | - | chr1_4:58915806-58915825 | Msa0173590:intron | 50.0% | |
GCACGCAGTAAAACCTCAGA+AGG | + | chr1_4:58916232-58916251 | None:intergenic | 50.0% | |
! | CACTCAACACGAGTTAGCCT+TGG | + | chr1_4:58916677-58916696 | None:intergenic | 50.0% |
CAAGGCTAACTCGTGTTGAG+TGG | - | chr1_4:58916675-58916694 | Msa0173590:intron | 50.0% | |
! | AAACCTGCGTGGTTTGCCAA+GGG | + | chr1_4:58916828-58916847 | None:intergenic | 50.0% |
! | AAAACCTGCGTGGTTTGCCA+AGG | + | chr1_4:58916829-58916848 | None:intergenic | 50.0% |
! | TGGCAAACCACGCAGGTTTT+CGG | - | chr1_4:58916829-58916848 | Msa0173590:CDS | 50.0% |
AAGTGTTCCGAAAACCTGCG+TGG | + | chr1_4:58916839-58916858 | None:intergenic | 50.0% | |
CATTATTCTGAGCTGCGGAC+TGG | - | chr1_4:58916911-58916930 | Msa0173590:CDS | 50.0% | |
!! | CTGCGGACTGGTATAAGAGA+TGG | - | chr1_4:58916923-58916942 | Msa0173590:CDS | 50.0% |
GAATGGGTCAGACCTTTCTC+TGG | + | chr1_4:58917299-58917318 | None:intergenic | 50.0% | |
GAGGCCACAGATTAGAGTGT+TGG | + | chr1_4:58917369-58917388 | None:intergenic | 50.0% | |
CACTCTAATCTGTGGCCTCT+TGG | - | chr1_4:58917370-58917389 | Msa0173590:intron | 50.0% | |
!! | ATATGCCCGAAGCTTTGAGG+AGG | - | chr1_4:58917659-58917678 | Msa0173590:CDS | 50.0% |
ATCTGCCTCCTCAAAGCTTC+GGG | + | chr1_4:58917667-58917686 | None:intergenic | 50.0% | |
!! | GAAGCTTTGAGGAGGCAGAT+TGG | - | chr1_4:58917667-58917686 | Msa0173590:CDS | 50.0% |
!! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr1_4:58918060-58918079 | Msa0173590:intron | 50.0% |
! | AGTAATCCCCCCACCTTTTG+TGG | - | chr1_4:58918133-58918152 | Msa0173590:CDS | 50.0% |
AAACCTCCACAAAAGGTGGG+GGG | + | chr1_4:58918142-58918161 | None:intergenic | 50.0% | |
GAAACCTCCACAAAAGGTGG+GGG | + | chr1_4:58918143-58918162 | None:intergenic | 50.0% | |
! | TGCTAACCATGTCACTTCCC+AGG | - | chr1_4:58918608-58918627 | Msa0173590:intron | 50.0% |
! | TATTGGCCTGGGAAGTGACA+TGG | + | chr1_4:58918617-58918636 | None:intergenic | 50.0% |
GTCACTTCCCAGGCCAATAT+TGG | - | chr1_4:58918618-58918637 | Msa0173590:intron | 50.0% | |
CACTTTACACGGTTGAGCAG+AGG | + | chr1_4:58918664-58918683 | None:intergenic | 50.0% | |
GTGTATCCTGTAAGAGCAGC+TGG | + | chr1_4:58918999-58919018 | None:intergenic | 50.0% | |
GTAGAGCTAAAGGAAGCCAG+TGG | - | chr1_4:58919126-58919145 | Msa0173590:intron | 50.0% | |
GCGTTGCCTCAATTGAAGCA+TGG | + | chr1_4:58919251-58919270 | None:intergenic | 50.0% | |
TGGCAGAGAGGTTTCCGTAT+AGG | + | chr1_4:58919278-58919297 | None:intergenic | 50.0% | |
TGACTGACTGCAAAACCGGA+GGG | + | chr1_4:58919480-58919499 | None:intergenic | 50.0% | |
ATGACTGACTGCAAAACCGG+AGG | + | chr1_4:58919481-58919500 | None:intergenic | 50.0% | |
GGCATGGTCTCAAGCTACAA+AGG | - | chr1_4:58919782-58919801 | Msa0173590:intron | 50.0% | |
TACGAAGATTGGGCAGGCAT+TGG | - | chr1_4:58919821-58919840 | Msa0173590:intron | 50.0% | |
AGCAGTTGTCCACCAAGTAC+AGG | - | chr1_4:58919859-58919878 | Msa0173590:intron | 50.0% | |
! | GGAAGGTTTCGAGTATCGCA+CGG | + | chr1_4:58920437-58920456 | None:intergenic | 50.0% |
GAATAGGAGCTGGCACATAC+CGG | - | chr1_4:58920722-58920741 | Msa0173590:intron | 50.0% | |
! | CCGCGGCTGTTACTGATTGT+AGG | + | chr1_4:58909296-58909315 | None:intergenic | 55.0% |
GAGCCAGCTCCATCTTTCTC+AGG | + | chr1_4:58910634-58910653 | None:intergenic | 55.0% | |
TGGGATCTCAGTGGAGCAAG+GGG | - | chr1_4:58911367-58911386 | Msa0173590:CDS | 55.0% | |
ACAACAGAAGCTGTCCCCTC+TGG | + | chr1_4:58911942-58911961 | None:intergenic | 55.0% | |
GAGGGGACAGCTTCTGTTGT+AGG | - | chr1_4:58911942-58911961 | Msa0173590:intron | 55.0% | |
GAAGTGAGGTCTGACCATCG+GGG | + | chr1_4:58912177-58912196 | None:intergenic | 55.0% | |
AGGGAGAGCAATGATGCACC+AGG | - | chr1_4:58912391-58912410 | Msa0173590:CDS | 55.0% | |
GAGTGGTAAACTGGGACTCG+TGG | + | chr1_4:58913205-58913224 | None:intergenic | 55.0% | |
AGCAGGGCTTCACAAAGAGG+AGG | - | chr1_4:58913331-58913350 | Msa0173590:intron | 55.0% | |
AGTTCTCTCCTGCTCAGAGC+CGG | - | chr1_4:58913398-58913417 | Msa0173590:intron | 55.0% | |
!! | ATTCTATCCCGGCTCTGAGC+AGG | + | chr1_4:58913409-58913428 | None:intergenic | 55.0% |
TGCTCAGAGCCGGGATAGAA+TGG | - | chr1_4:58913408-58913427 | Msa0173590:CDS | 55.0% | |
! | ATGGAAGGAACGAGCACTGC+TGG | - | chr1_4:58913726-58913745 | Msa0173590:CDS | 55.0% |
! | GAGCACTGCTGGAGTTCCTA+AGG | - | chr1_4:58913737-58913756 | Msa0173590:CDS | 55.0% |
ACTGCTGGAGTTCCTAAGGG+AGG | - | chr1_4:58913741-58913760 | Msa0173590:CDS | 55.0% | |
GCGTGTGTGTGTGTGTTGAG+AGG | + | chr1_4:58914322-58914341 | None:intergenic | 55.0% | |
! | ATCTGGAGTGTGGGCCGATA+GGG | - | chr1_4:58914376-58914395 | Msa0173590:intron | 55.0% |
TCCACTGAGCCACTCCCTAT+CGG | + | chr1_4:58914393-58914412 | None:intergenic | 55.0% | |
! | GCATTGCAAGCCGGCTTTGT+AGG | + | chr1_4:58914469-58914488 | None:intergenic | 55.0% |
ACAGTCCTCGCATTGCAAGC+CGG | + | chr1_4:58914478-58914497 | None:intergenic | 55.0% | |
TGGACAGTCCTCGCATTGAG+AGG | + | chr1_4:58914604-58914623 | None:intergenic | 55.0% | |
GTGCGTGTGTGTGTGTTGAG+AGG | + | chr1_4:58914672-58914691 | None:intergenic | 55.0% | |
! | ATCTGGAGTGTGGGCTGAGA+GGG | - | chr1_4:58914721-58914740 | Msa0173590:intron | 55.0% |
AATACAGAGAGAGGGGGGAG+AGG | - | chr1_4:58914950-58914969 | Msa0173590:CDS | 55.0% | |
ATACAGAGAGAGGGGGGAGA+GGG | - | chr1_4:58914951-58914970 | Msa0173590:CDS | 55.0% | |
GACGTGATTCTAGACGGGCA+AGG | + | chr1_4:58915040-58915059 | None:intergenic | 55.0% | |
GAGAGACAGGGAACCGAATG+TGG | + | chr1_4:58915895-58915914 | None:intergenic | 55.0% | |
CAGTTCGATCGTCCCCAGTT+AGG | - | chr1_4:58917067-58917086 | Msa0173590:intron | 55.0% | |
! | AATCCCCCCACCTTTTGTGG+AGG | - | chr1_4:58918136-58918155 | Msa0173590:CDS | 55.0% |
GCTAAAGGAAGCCAGTGGAC+AGG | - | chr1_4:58919131-58919150 | Msa0173590:intron | 55.0% | |
CTTCATCCATGGTGGCAGAG+AGG | + | chr1_4:58919290-58919309 | None:intergenic | 55.0% | |
! | GCTTTGGGCTTCATCCATGG+TGG | + | chr1_4:58919298-58919317 | None:intergenic | 55.0% |
CATTGCATGTGCCTGTAGCC+TGG | + | chr1_4:58919413-58919432 | None:intergenic | 55.0% | |
GCTACAGGCACATGCAATGC+TGG | - | chr1_4:58919414-58919433 | Msa0173590:intron | 55.0% | |
CTGTGGATCTTATGCCCCTC+CGG | - | chr1_4:58919462-58919481 | Msa0173590:CDS | 55.0% | |
GACTGACTGCAAAACCGGAG+GGG | + | chr1_4:58919479-58919498 | None:intergenic | 55.0% | |
TCCTCCCTATTTCGGTGACC+TGG | - | chr1_4:58919538-58919557 | Msa0173590:exon | 55.0% | |
CCTCCCTATTTCGGTGACCT+GGG | - | chr1_4:58919539-58919558 | Msa0173590:exon | 55.0% | |
GCTCCCAGGTCACCGAAATA+GGG | + | chr1_4:58919545-58919564 | None:intergenic | 55.0% | |
TGCTCCCAGGTCACCGAAAT+AGG | + | chr1_4:58919546-58919565 | None:intergenic | 55.0% | |
CACAGGCAACCTGTACTTGG+TGG | + | chr1_4:58919871-58919890 | None:intergenic | 55.0% | |
GCAATACCCTCCAGCTGATG+TGG | - | chr1_4:58920376-58920395 | Msa0173590:intron | 55.0% | |
TCTGAGCCACATCAGCTGGA+GGG | + | chr1_4:58920385-58920404 | None:intergenic | 55.0% | |
ATCTGAGCCACATCAGCTGG+AGG | + | chr1_4:58920386-58920405 | None:intergenic | 55.0% | |
! | TTCGAGTATCGCACGGTTGC+AGG | + | chr1_4:58920430-58920449 | None:intergenic | 55.0% |
GGGATCTCAGTGGAGCAAGG+GGG | - | chr1_4:58911368-58911387 | Msa0173590:CDS | 60.0% | |
GTTCTCTCCTGCTCAGAGCC+GGG | - | chr1_4:58913399-58913418 | Msa0173590:intron | 60.0% | |
! | GACGGAGGAGAAGCATGCAG+CGG | - | chr1_4:58913819-58913838 | Msa0173590:CDS | 60.0% |
! | GCATGCAGCGGCACTGAAGA+AGG | - | chr1_4:58913831-58913850 | Msa0173590:CDS | 60.0% |
! | CATCTGGAGTGTGGGCCGAT+AGG | - | chr1_4:58914375-58914394 | Msa0173590:intron | 60.0% |
GGGAGTGGCTCAGTGGATGT+TGG | - | chr1_4:58914396-58914415 | Msa0173590:intron | 60.0% | |
!! | CAAAGCCGGCTTGCAATGCG+AGG | - | chr1_4:58914470-58914489 | Msa0173590:intron | 60.0% |
! | CATCTGGAGTGTGGGCTGAG+AGG | - | chr1_4:58914720-58914739 | Msa0173590:intron | 60.0% |
GGGAGTGGCTCAGTGGATGT+TGG | - | chr1_4:58914396-58914415 | Msa0173590:intron | 60.0% | |
GTTCCCTTGGCAAACCACGC+AGG | - | chr1_4:58916822-58916841 | Msa0173590:CDS | 60.0% | |
! | GAAGAGGGGCGTACCTTCAC+AGG | + | chr1_4:58917775-58917794 | None:intergenic | 60.0% |
CAGAGGCAGCTTGAGCACAG+AGG | + | chr1_4:58918647-58918666 | None:intergenic | 60.0% | |
GAAGCCAGTGGACAGGCATG+TGG | - | chr1_4:58919138-58919157 | Msa0173590:intron | 60.0% | |
GAAGCCACATGCCTGTCCAC+TGG | + | chr1_4:58919145-58919164 | None:intergenic | 60.0% | |
CGGAAACCTCTCTGCCACCA+TGG | - | chr1_4:58919281-58919300 | Msa0173590:intron | 60.0% | |
CCCAGGTCACCGAAATAGGG+AGG | + | chr1_4:58919542-58919561 | None:intergenic | 60.0% | |
GCACGGTTGCAGGCTGGTAA+CGG | + | chr1_4:58920420-58920439 | None:intergenic | 60.0% | |
AGTATCGCACGGTTGCAGGC+TGG | + | chr1_4:58920426-58920445 | None:intergenic | 60.0% | |
TACGTACAGCGGCAGCCACC+TGG | + | chr1_4:58911606-58911625 | None:intergenic | 65.0% | |
GGTCTGCAGCCTCGTGCTGT+TGG | - | chr1_4:58913169-58913188 | Msa0173590:CDS | 65.0% | |
GAGTGTGGGCCGATAGGGAG+TGG | - | chr1_4:58914381-58914400 | Msa0173590:intron | 65.0% | |
GCCGATAGGGAGTGGCTCAG+TGG | - | chr1_4:58914389-58914408 | Msa0173590:intron | 65.0% | |
! | GAGTGTGGGCTGAGAGGGAG+TGG | - | chr1_4:58914726-58914745 | Msa0173590:intron | 65.0% |
GCTGAGAGGGAGTGGCTCAG+TGG | - | chr1_4:58914734-58914753 | Msa0173590:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 58909173 | 58920946 | 58909173 | ID=Msa0173590;Name=Msa0173590 |
chr1_4 | mRNA | 58909173 | 58920946 | 58909173 | ID=Msa0173590-mRNA-1;Parent=Msa0173590;Name=Msa0173590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=180|1|1|1|0.94|0.94|19|420|1120 |
chr1_4 | exon | 58909173 | 58909757 | 58909173 | ID=Msa0173590-mRNA-1:exon:18412;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58910046 | 58910336 | 58910046 | ID=Msa0173590-mRNA-1:exon:18411;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58910669 | 58910881 | 58910669 | ID=Msa0173590-mRNA-1:exon:18410;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58910967 | 58911107 | 58910967 | ID=Msa0173590-mRNA-1:exon:18409;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58911367 | 58911516 | 58911367 | ID=Msa0173590-mRNA-1:exon:18408;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58912339 | 58912494 | 58912339 | ID=Msa0173590-mRNA-1:exon:18407;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58913014 | 58913296 | 58913014 | ID=Msa0173590-mRNA-1:exon:18406;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58913408 | 58913586 | 58913408 | ID=Msa0173590-mRNA-1:exon:18405;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58913693 | 58913977 | 58913693 | ID=Msa0173590-mRNA-1:exon:18404;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58914821 | 58915068 | 58914821 | ID=Msa0173590-mRNA-1:exon:18403;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58915918 | 58915995 | 58915918 | ID=Msa0173590-mRNA-1:exon:18402;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58916126 | 58916525 | 58916126 | ID=Msa0173590-mRNA-1:exon:18401;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58916690 | 58916949 | 58916690 | ID=Msa0173590-mRNA-1:exon:18400;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58917578 | 58917746 | 58917578 | ID=Msa0173590-mRNA-1:exon:18399;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58918118 | 58918195 | 58918118 | ID=Msa0173590-mRNA-1:exon:18398;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58918450 | 58918512 | 58918450 | ID=Msa0173590-mRNA-1:exon:18397;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58918676 | 58918774 | 58918676 | ID=Msa0173590-mRNA-1:exon:18396;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58919447 | 58919566 | 58919447 | ID=Msa0173590-mRNA-1:exon:18395;Parent=Msa0173590-mRNA-1 |
chr1_4 | exon | 58920782 | 58920946 | 58920782 | ID=Msa0173590-mRNA-1:exon:18394;Parent=Msa0173590-mRNA-1 |
chr1_4 | five_prime_UTR | 58920782 | 58920946 | 58920782 | ID=Msa0173590-mRNA-1:five_prime_utr;Parent=Msa0173590-mRNA-1 |
chr1_4 | five_prime_UTR | 58919552 | 58919566 | 58919552 | ID=Msa0173590-mRNA-1:five_prime_utr;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58919447 | 58919551 | 58919447 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58918676 | 58918774 | 58918676 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58918450 | 58918512 | 58918450 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58918118 | 58918195 | 58918118 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58917578 | 58917746 | 58917578 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58916690 | 58916949 | 58916690 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58916126 | 58916525 | 58916126 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58915918 | 58915995 | 58915918 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58914821 | 58915068 | 58914821 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58913693 | 58913977 | 58913693 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58913408 | 58913586 | 58913408 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58913014 | 58913296 | 58913014 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58912339 | 58912494 | 58912339 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58911367 | 58911516 | 58911367 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58910967 | 58911107 | 58910967 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58910669 | 58910881 | 58910669 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58910046 | 58910336 | 58910046 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | CDS | 58909593 | 58909757 | 58909593 | ID=Msa0173590-mRNA-1:cds;Parent=Msa0173590-mRNA-1 |
chr1_4 | three_prime_UTR | 58909173 | 58909592 | 58909173 | ID=Msa0173590-mRNA-1:three_prime_utr;Parent=Msa0173590-mRNA-1 |
Gene Sequence |
Protein sequence |