Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236630 | XP_003593908.1 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236630 | sp|Q9C6Z0|FBK17_ARATH | 68.473 | 406 | 119 | 2 | 15 | 419 | 1 | 398 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236630 | G7IP74 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0236630 | 0.808366 | 3.208408e-50 | -8.615850e-47 |
| Msa0043980 | Msa0236630 | 0.821634 | 3.636944e-53 | -8.615850e-47 |
| Msa0058490 | Msa0236630 | 0.812971 | 3.241542e-51 | -8.615850e-47 |
| Msa0058510 | Msa0236630 | 0.814332 | 1.625721e-51 | -8.615850e-47 |
| Msa0078750 | Msa0236630 | 0.828225 | 1.011802e-54 | -8.615850e-47 |
| Msa0079070 | Msa0236630 | 0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa0092990 | Msa0236630 | 0.802852 | 4.608171e-49 | -8.615850e-47 |
| Msa0096450 | Msa0236630 | 0.814385 | 1.583061e-51 | -8.615850e-47 |
| Msa0108560 | Msa0236630 | 0.812933 | 3.304326e-51 | -8.615850e-47 |
| Msa0170230 | Msa0236630 | 0.806688 | 7.283208e-50 | -8.615850e-47 |
| Msa0184020 | Msa0236630 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0191940 | Msa0236630 | 0.818915 | 1.527471e-52 | -8.615850e-47 |
| Msa0194950 | Msa0236630 | -0.808595 | 2.866658e-50 | -8.615850e-47 |
| Msa0217680 | Msa0236630 | 0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa0220580 | Msa0236630 | 0.828191 | 1.031077e-54 | -8.615850e-47 |
| Msa0223010 | Msa0236630 | 0.806472 | 8.089185e-50 | -8.615850e-47 |
| Msa0234050 | Msa0236630 | 0.821008 | 5.071556e-53 | -8.615850e-47 |
| Msa0236630 | Msa0282250 | 0.801376 | 9.270779e-49 | -8.615850e-47 |
| Msa0236630 | Msa0287410 | 0.810889 | 9.208592e-51 | -8.615850e-47 |
| Msa0236630 | Msa0308270 | 0.822446 | 2.359269e-53 | -8.615850e-47 |
| Msa0236630 | Msa0315290 | 0.911613 | 4.989735e-83 | -8.615850e-47 |
| Msa0236630 | Msa0346430 | 0.847239 | 1.311248e-59 | -8.615850e-47 |
| Msa0236630 | Msa0356960 | 0.811033 | 8.572317e-51 | -8.615850e-47 |
| Msa0236630 | Msa0373930 | 0.801817 | 7.528750e-49 | -8.615850e-47 |
| Msa0236630 | Msa0375980 | 0.805302 | 1.425552e-49 | -8.615850e-47 |
| Msa0236630 | Msa0379640 | 0.850073 | 2.149283e-60 | -8.615850e-47 |
| Msa0236630 | Msa0382180 | 0.800681 | 1.285625e-48 | -8.615850e-47 |
| Msa0236630 | Msa0391690 | 0.846175 | 2.561719e-59 | -8.615850e-47 |
| Msa0236630 | Msa0394340 | 0.841982 | 3.414016e-58 | -8.615850e-47 |
| Msa0236630 | Msa0412840 | 0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0236630 | Msa0433360 | 0.830437 | 2.938715e-55 | -8.615850e-47 |
| Msa0236630 | Msa0442200 | 0.848743 | 5.045549e-60 | -8.615850e-47 |
| Msa0236630 | Msa0453350 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa0236630 | Msa0472960 | -0.803229 | 3.851811e-49 | -8.615850e-47 |
| Msa0236630 | Msa0475410 | 0.805042 | 1.615488e-49 | -8.615850e-47 |
| Msa0236630 | Msa0475490 | 0.817152 | 3.824216e-52 | -8.615850e-47 |
| Msa0236630 | Msa0477080 | 0.832973 | 6.961255e-56 | -8.615850e-47 |
| Msa0236630 | Msa0489610 | 0.833527 | 5.065715e-56 | -8.615850e-47 |
| Msa0236630 | Msa0493630 | 0.834092 | 3.660671e-56 | -8.615850e-47 |
| Msa0236630 | Msa0502100 | 0.808506 | 2.995194e-50 | -8.615850e-47 |
| Msa0236630 | Msa0521430 | 0.803351 | 3.633864e-49 | -8.615850e-47 |
| Msa0236630 | Msa0536220 | 0.811055 | 8.475746e-51 | -8.615850e-47 |
| Msa0236630 | Msa0539750 | 0.829763 | 4.291068e-55 | -8.615850e-47 |
| Msa0236630 | Msa0554740 | 0.831056 | 2.071681e-55 | -8.615850e-47 |
| Msa0236630 | Msa0578970 | 0.812239 | 4.685887e-51 | -8.615850e-47 |
| Msa0236630 | Msa0608160 | 0.808866 | 2.509610e-50 | -8.615850e-47 |
| Msa0236630 | Msa0608710 | 0.840808 | 6.954776e-58 | -8.615850e-47 |
| Msa0236630 | Msa0610590 | 0.811166 | 8.020784e-51 | -8.615850e-47 |
| Msa0236630 | Msa0626820 | 0.822585 | 2.189192e-53 | -8.615850e-47 |
| Msa0236630 | Msa0628740 | 0.807491 | 4.926608e-50 | -8.615850e-47 |
| Msa0236630 | Msa0631990 | 0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0236630 | Msa0648080 | 0.810958 | 8.898238e-51 | -8.615850e-47 |
| Msa0236630 | Msa0651190 | 0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa0236630 | Msa0663920 | 0.818633 | 1.770253e-52 | -8.615850e-47 |
| Msa0236630 | Msa0664950 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0236630 | Msa0666140 | 0.807061 | 6.075235e-50 | -8.615850e-47 |
| Msa0236630 | Msa0670660 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0236630 | Msa0672690 | 0.808463 | 3.059191e-50 | -8.615850e-47 |
| Msa0236630 | Msa0723110 | 0.800970 | 1.122339e-48 | -8.615850e-47 |
| Msa0236630 | Msa0732880 | 0.810683 | 1.020517e-50 | -8.615850e-47 |
| Msa0236630 | Msa0771720 | 0.802600 | 5.194360e-49 | -8.615850e-47 |
| Msa0236630 | Msa0820770 | 0.812277 | 4.596205e-51 | -8.615850e-47 |
| Msa0236630 | Msa0861090 | 0.802524 | 5.385517e-49 | -8.615850e-47 |
| Msa0236630 | Msa0866950 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0236630 | Msa0869120 | 0.828565 | 8.378523e-55 | -8.615850e-47 |
| Msa0236630 | Msa0927670 | 0.812810 | 3.514673e-51 | -8.615850e-47 |
| Msa0236630 | Msa0931520 | 0.801195 | 1.009812e-48 | -8.615850e-47 |
| Msa0236630 | Msa0946280 | -0.808598 | 2.863109e-50 | -8.615850e-47 |
| Msa0236630 | Msa0960160 | 0.802707 | 4.937955e-49 | -8.615850e-47 |
| Msa0236630 | Msa1023180 | 0.822153 | 2.758034e-53 | -8.615850e-47 |
| Msa0236630 | Msa1023920 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa0236630 | Msa1034150 | 0.807015 | 6.213967e-50 | -8.615850e-47 |
| Msa0236630 | Msa1043050 | 0.828129 | 1.066991e-54 | -8.615850e-47 |
| Msa0236630 | Msa1044420 | 0.817707 | 2.867880e-52 | -8.615850e-47 |
| Msa0236630 | Msa1062920 | 0.804925 | 1.709167e-49 | -8.615850e-47 |
| Msa0236630 | Msa1087850 | 0.823760 | 1.164205e-53 | -8.615850e-47 |
| Msa0236630 | Msa1090260 | 0.814956 | 1.182686e-51 | -8.615850e-47 |
| Msa0236630 | Msa1092090 | 0.804264 | 2.347774e-49 | -8.615850e-47 |
| Msa0236630 | Msa1107900 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa0236630 | Msa1150710 | 0.824298 | 8.706275e-54 | -8.615850e-47 |
| Msa0236630 | Msa1174040 | 0.833181 | 6.179872e-56 | -8.615850e-47 |
| Msa0236630 | Msa1190930 | 0.823034 | 1.721144e-53 | -8.615850e-47 |
| Msa0236630 | Msa1204530 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0236630 | Msa1206100 | 0.811998 | 5.287507e-51 | -8.615850e-47 |
| Msa0236630 | Msa1212170 | 0.806676 | 7.327948e-50 | -8.615850e-47 |
| Msa0236630 | Msa1212250 | 0.804084 | 2.559859e-49 | -8.615850e-47 |
| Msa0236630 | Msa1233500 | 0.802480 | 5.500052e-49 | -8.615850e-47 |
| Msa0236630 | Msa1233890 | 0.819001 | 1.460543e-52 | -8.615850e-47 |
| Msa0236630 | Msa1234000 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0236630 | Msa1244610 | 0.804455 | 2.142140e-49 | -8.615850e-47 |
| Msa0236630 | Msa1244720 | -0.810797 | 9.641536e-51 | -8.615850e-47 |
| Msa0236630 | Msa1247250 | 0.825200 | 5.337555e-54 | -8.615850e-47 |
| Msa0236630 | Msa1259590 | -0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0236630 | Msa1267520 | 0.820425 | 6.904949e-53 | -8.615850e-47 |
| Msa0236630 | Msa1288420 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
| Msa0236630 | Msa1289010 | 0.817784 | 2.755633e-52 | -8.615850e-47 |
| Msa0236630 | Msa1296940 | 0.818539 | 1.859761e-52 | -8.615850e-47 |
| Msa0236630 | Msa1305340 | 0.820655 | 6.115279e-53 | -8.615850e-47 |
| Msa0236630 | Msa1329550 | 0.811833 | 5.743638e-51 | -8.615850e-47 |
| Msa0236630 | Msa1340020 | 0.815895 | 7.312176e-52 | -8.615850e-47 |
| Msa0236630 | Msa1376760 | 0.828934 | 6.820005e-55 | -8.615850e-47 |
| Msa0236630 | Msa1382160 | 0.957767 | 1.223540e-115 | -8.615850e-47 |
| Msa0236630 | Msa1412890 | 0.811720 | 6.079327e-51 | -8.615850e-47 |
| Msa0236630 | Msa1419640 | 0.814694 | 1.352486e-51 | -8.615850e-47 |
| Msa0236630 | Msa1427230 | 0.820251 | 7.570308e-53 | -8.615850e-47 |
| Msa0236630 | Msa1444740 | 0.839694 | 1.359582e-57 | -8.615850e-47 |
| Msa0236630 | Msa1448630 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0236630 | Msa1453080 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0236630 | Msa1459950 | 0.894624 | 2.070433e-75 | -8.615850e-47 |
| Msa0236630 | Msa1460830 | 0.821537 | 3.829820e-53 | -8.615850e-47 |
| Msa0236630 | Msa1461280 | 0.802509 | 5.423330e-49 | -8.615850e-47 |
| Msa0236630 | Msa1464940 | 0.801400 | 9.167816e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236630 | MtrunA17_Chr2g0285851 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Msa0236630 | MtrunA17_Chr3g0138981 | 33.880 | 366 | 214 | 7 | 56 | 419 | 7 | 346 | 4.70e-67 | 217 |
| Msa0236630 | MtrunA17_Chr4g0063531 | 33.566 | 286 | 175 | 8 | 58 | 339 | 59 | 333 | 1.75e-42 | 154 |
| Msa0236630 | MtrunA17_Chr8g0378511 | 31.834 | 289 | 182 | 8 | 63 | 347 | 74 | 351 | 3.91e-38 | 143 |
| Msa0236630 | MtrunA17_Chr3g0115401 | 27.536 | 345 | 178 | 12 | 66 | 344 | 43 | 381 | 1.06e-30 | 123 |
| Msa0236630 | MtrunA17_Chr8g0348991 | 30.031 | 323 | 205 | 11 | 65 | 378 | 24 | 334 | 4.23e-30 | 119 |
| Msa0236630 | MtrunA17_Chr2g0278921 | 28.205 | 351 | 171 | 13 | 66 | 344 | 43 | 384 | 1.37e-29 | 119 |
| Msa0236630 | MtrunA17_Chr8g0377241 | 30.263 | 304 | 186 | 9 | 59 | 348 | 34 | 325 | 1.28e-28 | 115 |
| Msa0236630 | MtrunA17_Chr3g0122681 | 27.682 | 289 | 195 | 7 | 63 | 348 | 32 | 309 | 9.03e-24 | 102 |
| Msa0236630 | MtrunA17_Chr3g0129221 | 30.272 | 294 | 176 | 11 | 66 | 352 | 9 | 280 | 6.38e-23 | 99.4 |
| Msa0236630 | MtrunA17_Chr2g0326541 | 26.377 | 345 | 230 | 9 | 64 | 400 | 18 | 346 | 1.08e-20 | 92.8 |
| Msa0236630 | MtrunA17_Chr8g0378571 | 30.357 | 224 | 140 | 4 | 66 | 276 | 7 | 227 | 9.65e-19 | 87.0 |
| Msa0236630 | MtrunA17_Chr4g0011151 | 23.120 | 359 | 226 | 12 | 26 | 368 | 80 | 404 | 3.10e-17 | 83.6 |
| Msa0236630 | MtrunA17_Chr4g0011171 | 22.841 | 359 | 227 | 12 | 26 | 368 | 80 | 404 | 1.30e-16 | 81.6 |
| Msa0236630 | MtrunA17_Chr7g0260051 | 29.954 | 217 | 135 | 7 | 66 | 272 | 4 | 213 | 1.31e-16 | 80.5 |
| Msa0236630 | MtrunA17_Chr4g0011221 | 23.120 | 359 | 226 | 12 | 26 | 368 | 80 | 404 | 1.78e-16 | 81.3 |
| Msa0236630 | MtrunA17_Chr6g0459491 | 24.662 | 296 | 196 | 9 | 67 | 347 | 57 | 340 | 2.29e-16 | 80.5 |
| Msa0236630 | MtrunA17_Chr4g0011161 | 22.563 | 359 | 228 | 12 | 26 | 368 | 80 | 404 | 2.68e-16 | 80.5 |
| Msa0236630 | MtrunA17_Chr4g0010131 | 21.907 | 388 | 259 | 13 | 29 | 392 | 25 | 392 | 1.37e-15 | 78.2 |
| Msa0236630 | MtrunA17_Chr4g0011191 | 25.100 | 251 | 155 | 7 | 26 | 275 | 80 | 298 | 5.13e-15 | 75.5 |
| Msa0236630 | MtrunA17_Chr4g0060541 | 22.191 | 356 | 241 | 12 | 58 | 393 | 23 | 362 | 3.92e-13 | 70.5 |
| Msa0236630 | MtrunA17_Chr3g0144091 | 25.519 | 337 | 174 | 15 | 70 | 351 | 143 | 457 | 2.54e-12 | 68.6 |
| Msa0236630 | MtrunA17_Chr7g0225551 | 23.256 | 301 | 206 | 9 | 60 | 347 | 43 | 331 | 6.95e-12 | 66.6 |
| Msa0236630 | MtrunA17_Chr7g0243481 | 32.192 | 146 | 93 | 5 | 170 | 313 | 165 | 306 | 6.76e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0236630 | AT1G30090.1 | 68.473 | 406 | 119 | 2 | 15 | 419 | 1 | 398 | 0.0 | 599 |
| Msa0236630 | AT2G24540.1 | 37.433 | 374 | 217 | 9 | 49 | 418 | 11 | 371 | 5.61e-83 | 259 |
| Msa0236630 | AT1G55270.1 | 32.975 | 279 | 178 | 7 | 63 | 340 | 75 | 345 | 3.54e-41 | 151 |
| Msa0236630 | AT1G22040.1 | 30.233 | 344 | 169 | 13 | 66 | 344 | 43 | 380 | 6.70e-34 | 132 |
| Msa0236630 | AT1G67480.3 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa0236630 | AT1G67480.1 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa0236630 | AT1G67480.2 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa0236630 | AT1G27420.1 | 26.398 | 322 | 184 | 9 | 65 | 386 | 9 | 277 | 1.43e-25 | 107 |
| Msa0236630 | AT1G55270.2 | 29.464 | 224 | 150 | 6 | 118 | 340 | 3 | 219 | 7.92e-22 | 95.5 |
| Msa0236630 | AT5G60570.2 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa0236630 | AT5G60570.1 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa0236630 | AT5G60570.3 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa0236630 | AT3G63220.1 | 28.472 | 288 | 173 | 10 | 66 | 342 | 4 | 269 | 7.42e-20 | 90.5 |
| Msa0236630 | AT3G63220.3 | 28.472 | 288 | 173 | 10 | 66 | 342 | 11 | 276 | 8.26e-20 | 90.5 |
| Msa0236630 | AT3G63220.2 | 28.472 | 288 | 173 | 10 | 66 | 342 | 11 | 276 | 8.26e-20 | 90.5 |
| Msa0236630 | AT3G61350.2 | 22.956 | 318 | 219 | 11 | 66 | 375 | 21 | 320 | 1.42e-18 | 87.0 |
| Msa0236630 | AT3G61350.1 | 22.956 | 318 | 219 | 11 | 66 | 375 | 21 | 320 | 1.42e-18 | 87.0 |
| Msa0236630 | AT1G16250.2 | 27.530 | 247 | 162 | 7 | 63 | 299 | 5 | 244 | 1.47e-18 | 87.4 |
| Msa0236630 | AT1G16250.1 | 27.530 | 247 | 162 | 7 | 63 | 299 | 5 | 244 | 1.47e-18 | 87.4 |
| Msa0236630 | AT2G21950.1 | 27.303 | 304 | 194 | 11 | 66 | 358 | 20 | 307 | 3.68e-17 | 83.2 |
| Msa0236630 | AT4G39580.1 | 25.874 | 286 | 184 | 10 | 70 | 344 | 26 | 294 | 1.17e-14 | 75.5 |
| Msa0236630 | AT3G27150.2 | 23.269 | 361 | 243 | 10 | 5 | 347 | 4 | 348 | 8.91e-14 | 73.2 |
| Msa0236630 | AT3G27150.1 | 23.269 | 361 | 243 | 10 | 5 | 347 | 4 | 348 | 8.91e-14 | 73.2 |
| Msa0236630 | AT1G26930.1 | 23.602 | 322 | 212 | 10 | 66 | 368 | 71 | 377 | 8.99e-13 | 70.1 |
| Msa0236630 | AT1G60570.1 | 25.342 | 292 | 189 | 11 | 63 | 342 | 17 | 291 | 1.53e-12 | 68.9 |
| Msa0236630 | AT1G80440.1 | 29.279 | 222 | 143 | 7 | 66 | 276 | 3 | 221 | 6.88e-11 | 63.9 |
Find 123 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCCTCACAACTTTCTTT+TGG | 0.176864 | 2_2:+9567581 | None:intergenic |
| ATCAGGTAAGCCCGGAATTA+AGG | 0.209782 | 2_2:+9568534 | None:intergenic |
| GGTTCAAGCGTGGTTGTTTA+TGG | 0.236597 | 2_2:-9567803 | Msa0236630:CDS |
| TAATTGTCTTCTTCGTCTTC+CGG | 0.313205 | 2_2:-9568500 | Msa0236630:CDS |
| TTGTCCTTGCAAGGCATTGC+AGG | 0.324010 | 2_2:+9568283 | None:intergenic |
| TGTCGTAGGCCGGAATCTTC+TGG | 0.330235 | 2_2:-9567633 | Msa0236630:CDS |
| AAGAAAGTTGTGAGGGGAAA+TGG | 0.336256 | 2_2:-9567577 | Msa0236630:CDS |
| TGACACTATCTCCCAAGTTT+AGG | 0.343062 | 2_2:-9568624 | Msa0236630:CDS |
| AGCCATAGTTTCCCAGCTAT+TGG | 0.348050 | 2_2:+9567850 | None:intergenic |
| TGCCAACATGGGAACCAATA+TGG | 0.351045 | 2_2:-9567975 | Msa0236630:CDS |
| TGTTTCTTATTAAAGGGTTT+AGG | 0.355686 | 2_2:-9568740 | Msa0236630:intron |
| CTTCCCAGGAATCGGCTTCC+TGG | 0.361899 | 2_2:+9567729 | None:intergenic |
| AGGCAAAGGGGAGCCATCTA+TGG | 0.368132 | 2_2:+9567706 | None:intergenic |
| TAGATCCGATTAGCGGGAAT+TGG | 0.368843 | 2_2:-9568006 | Msa0236630:CDS |
| CCTCTAGGAGAGACATAAAA+AGG | 0.369553 | 2_2:+9567893 | None:intergenic |
| AGAGCTTGAAGGGGTCAAAT+TGG | 0.369698 | 2_2:+9567508 | None:intergenic |
| AACCAATAGCTGGGAAACTA+TGG | 0.377206 | 2_2:-9567852 | Msa0236630:CDS |
| AGAGAAGAACCCTTAATTCC+GGG | 0.383870 | 2_2:-9568544 | Msa0236630:CDS |
| AAGAGAAGAACCCTTAATTC+CGG | 0.391873 | 2_2:-9568545 | Msa0236630:CDS |
| GTTCAGAACTGCAGCATCAT+AGG | 0.399835 | 2_2:+9567949 | None:intergenic |
| ATAACCAGGAAGCCGATTCC+TGG | 0.405175 | 2_2:-9567733 | Msa0236630:CDS |
| GTTTCCCAGCTATTGGTTCT+CGG | 0.422970 | 2_2:+9567857 | None:intergenic |
| GCGCGCCAATTCCCGCTAAT+CGG | 0.425020 | 2_2:+9568001 | None:intergenic |
| AGCATCATAGGATGCCATAT+TGG | 0.428156 | 2_2:+9567961 | None:intergenic |
| TCAGGTAAGCCCGGAATTAA+GGG | 0.433050 | 2_2:+9568535 | None:intergenic |
| TGCATATTTGCTCAGGCAAA+GGG | 0.438541 | 2_2:+9567693 | None:intergenic |
| GAGATTTAACGATAAAGATA+AGG | 0.440458 | 2_2:-9568708 | Msa0236630:CDS |
| GCTCGAAAGAATGAAGCTTA+AGG | 0.440805 | 2_2:-9567759 | Msa0236630:CDS |
| TCACAAGCATTCACAGCAAA+AGG | 0.445454 | 2_2:+9567668 | None:intergenic |
| CAACAGCAACCAGAAGATTC+CGG | 0.446885 | 2_2:+9567624 | None:intergenic |
| TTATGTCTCTCCTAGAGGAC+AGG | 0.451993 | 2_2:-9567888 | Msa0236630:CDS |
| TTTGACCCCTTCAAGCTCTC+AGG | 0.453320 | 2_2:-9567504 | Msa0236630:CDS |
| AACCACCGCTAACCTAAACT+TGG | 0.453592 | 2_2:+9568612 | None:intergenic |
| AAAGGTTTGCATATTTGCTC+AGG | 0.456311 | 2_2:+9567686 | None:intergenic |
| CGTGGATTGTCCTCTTGACT+TGG | 0.459145 | 2_2:-9568182 | Msa0236630:CDS |
| TTTGCATATCATAAGTGTAC+TGG | 0.463348 | 2_2:-9568358 | Msa0236630:CDS |
| AAGGACAAGGTTTGTCCTCA+TGG | 0.464137 | 2_2:-9568268 | Msa0236630:CDS |
| ATGATGCTGCAGTTCTGAAC+GGG | 0.464281 | 2_2:-9567946 | Msa0236630:CDS |
| AAATGGGTTTCAAAGATCCT+TGG | 0.469304 | 2_2:-9568390 | Msa0236630:CDS |
| ATCTATGGCTTCCCAGGAAT+CGG | 0.471739 | 2_2:+9567721 | None:intergenic |
| GATTCCTGGGAAGCCATAGA+TGG | 0.472750 | 2_2:-9567719 | Msa0236630:CDS |
| CCTCTTGCAGACAGCCCTAC+AGG | 0.472883 | 2_2:+9568462 | None:intergenic |
| GTCAAATTTATGTCGTAGGC+CGG | 0.477828 | 2_2:-9567643 | Msa0236630:CDS |
| ATCTCCCAAGTTTAGGTTAG+CGG | 0.477981 | 2_2:-9568617 | Msa0236630:CDS |
| TACTGGAAAGATTCAATGGC+AGG | 0.482203 | 2_2:-9568341 | Msa0236630:CDS |
| TTGTAACAGAAGGATGGTTA+TGG | 0.483194 | 2_2:-9567916 | Msa0236630:CDS |
| CAATTAAGAGCAACATCATC+AGG | 0.483657 | 2_2:+9568517 | None:intergenic |
| CGGAATCTTCTGGTTGCTGT+TGG | 0.483823 | 2_2:-9567623 | Msa0236630:CDS |
| GGAGCCATCTATGGCTTCCC+AGG | 0.485903 | 2_2:+9567715 | None:intergenic |
| TAGTACTGATCTTTATGAGC+TGG | 0.486572 | 2_2:-9568044 | Msa0236630:CDS |
| ACGATCCGAGAACCAATAGC+TGG | 0.496530 | 2_2:-9567862 | Msa0236630:CDS |
| TTTACTAATAGGAAGCAAAT+GGG | 0.500450 | 2_2:-9568406 | Msa0236630:CDS |
| AATAGCACCTGAGAGCTTGA+AGG | 0.504117 | 2_2:+9567497 | None:intergenic |
| TTGCATATTTGCTCAGGCAA+AGG | 0.504929 | 2_2:+9567692 | None:intergenic |
| CTTGCAAGGCATTGCAGGGA+TGG | 0.507543 | 2_2:+9568288 | None:intergenic |
| AGCTGGGAAACTATGGCTGT+TGG | 0.507613 | 2_2:-9567845 | Msa0236630:CDS |
| GATGGGATGGTTTATGCAGC+TGG | 0.507844 | 2_2:-9568073 | Msa0236630:CDS |
| CAGGATGAATGACTTTGAAC+CGG | 0.508558 | 2_2:+9568481 | None:intergenic |
| TGCCATATTGGTTCCCATGT+TGG | 0.508940 | 2_2:+9567973 | None:intergenic |
| TGCAATGCCTTGCAAGGACA+AGG | 0.510866 | 2_2:-9568281 | Msa0236630:CDS |
| ATGGGATGGTTTATGCAGCT+GGG | 0.512009 | 2_2:-9568072 | Msa0236630:CDS |
| AGGTATTAGATCCGATTAGC+GGG | 0.521082 | 2_2:-9568012 | Msa0236630:CDS |
| TTGGGAGATAGTGTCATTTG+AGG | 0.521340 | 2_2:+9568631 | None:intergenic |
| AATGGAACTTCAGTGTTCAA+TGG | 0.527552 | 2_2:-9567559 | Msa0236630:CDS |
| AGTGTACTGGAAAGATTCAA+TGG | 0.529957 | 2_2:-9568345 | Msa0236630:CDS |
| ATAGCACCTGAGAGCTTGAA+GGG | 0.534517 | 2_2:+9567498 | None:intergenic |
| GCTCAGAAACAACAAATAAG+TGG | 0.537113 | 2_2:+9567780 | None:intergenic |
| TAACCAGGAAGCCGATTCCT+GGG | 0.538113 | 2_2:-9567732 | Msa0236630:CDS |
| CTTAGAGAATGATCTAACTC+TGG | 0.539641 | 2_2:+9568565 | None:intergenic |
| TTTGCCAGTGGAGTAATCGA+TGG | 0.542803 | 2_2:-9568091 | Msa0236630:CDS |
| CAAGCACCGGTTCACAAGCT+AGG | 0.543317 | 2_2:-9568658 | Msa0236630:CDS |
| TTGCCAGTGGAGTAATCGAT+GGG | 0.543911 | 2_2:-9568090 | Msa0236630:CDS |
| AAGAGGTGGCATATGTTACT+TGG | 0.546808 | 2_2:-9568445 | Msa0236630:CDS |
| GGACTTAGAGAAGGGTGGAC+TGG | 0.550423 | 2_2:-9567824 | Msa0236630:CDS |
| TTGGCGCGCTATTGCCAACA+TGG | 0.550527 | 2_2:-9567987 | Msa0236630:CDS |
| GGATCACCTAGCTTGTGAAC+CGG | 0.553072 | 2_2:+9568652 | None:intergenic |
| GCAACATCATCAGGTAAGCC+CGG | 0.556029 | 2_2:+9568526 | None:intergenic |
| TCAAAGTCATTCATCCTGTA+GGG | 0.557607 | 2_2:-9568476 | Msa0236630:CDS |
| GGATCGTAGACCTGTCCTCT+AGG | 0.560032 | 2_2:+9567878 | None:intergenic |
| CATCCCTGCAATGCCTTGCA+AGG | 0.560526 | 2_2:-9568287 | Msa0236630:CDS |
| GATTGTCAAATTTATGTCGT+AGG | 0.561359 | 2_2:-9567647 | Msa0236630:CDS |
| GAATGATCTAACTCTGGCAT+CGG | 0.561877 | 2_2:+9568571 | None:intergenic |
| CATCCCATCGATTACTCCAC+TGG | 0.564791 | 2_2:+9568087 | None:intergenic |
| TGTCCTTGCAAGGCATTGCA+GGG | 0.566024 | 2_2:+9568284 | None:intergenic |
| TCTTTACGTATGCGGTGGCA+TGG | 0.567533 | 2_2:-9568212 | Msa0236630:CDS |
| AACCCAAAAGAAAGTTGTGA+GGG | 0.567884 | 2_2:-9567584 | Msa0236630:CDS |
| TTCAAAGTCATTCATCCTGT+AGG | 0.569327 | 2_2:-9568477 | Msa0236630:CDS |
| TATGATGCTGCAGTTCTGAA+CGG | 0.569619 | 2_2:-9567947 | Msa0236630:CDS |
| GTAGGGCTGTCTGCAAGAGG+TGG | 0.571680 | 2_2:-9568459 | Msa0236630:CDS |
| ATGGCTGTTGGACTTAGAGA+AGG | 0.574595 | 2_2:-9567833 | Msa0236630:CDS |
| CCTGTAGGGCTGTCTGCAAG+AGG | 0.578172 | 2_2:-9568462 | Msa0236630:CDS |
| CAGTGGAGTAATCGATGGGA+TGG | 0.581579 | 2_2:-9568086 | Msa0236630:CDS |
| TGTTACTTGGTAGTAAAGAG+AGG | 0.594306 | 2_2:-9568432 | Msa0236630:CDS |
| GGACAAACCTTGTCCTTGCA+AGG | 0.597418 | 2_2:+9568274 | None:intergenic |
| TGGGATGGTTTATGCAGCTG+GGG | 0.601401 | 2_2:-9568071 | Msa0236630:CDS |
| GAAGCTTAAGGTTTATAACC+AGG | 0.604476 | 2_2:-9567747 | Msa0236630:CDS |
| TCCCAAGTTTAGGTTAGCGG+TGG | 0.605858 | 2_2:-9568614 | Msa0236630:CDS |
| TTATGAGCTGGATTCAGCTG+AGG | 0.606127 | 2_2:-9568032 | Msa0236630:CDS |
| TATTTCAACACCAAGTCAAG+AGG | 0.607388 | 2_2:+9568172 | None:intergenic |
| CGGTGGCATGGTCTCTGACG+TGG | 0.609464 | 2_2:-9568200 | Msa0236630:CDS |
| GAGGTATTAGATCCGATTAG+CGG | 0.618113 | 2_2:-9568013 | Msa0236630:CDS |
| GGGAAACTGCTTGTAACAGA+AGG | 0.619168 | 2_2:-9567926 | Msa0236630:CDS |
| CGATCCGAGAACCAATAGCT+GGG | 0.621734 | 2_2:-9567861 | Msa0236630:CDS |
| TGGCTGTTGGACTTAGAGAA+GGG | 0.623432 | 2_2:-9567832 | Msa0236630:CDS |
| AACTGCTTGTAACAGAAGGA+TGG | 0.627353 | 2_2:-9567922 | Msa0236630:CDS |
| TGGCGCGCTATTGCCAACAT+GGG | 0.632332 | 2_2:-9567986 | Msa0236630:CDS |
| TGAATCGAATGATCAGTGCT+AGG | 0.644133 | 2_2:-9568120 | Msa0236630:CDS |
| CTGTTGGACTTAGAGAAGGG+TGG | 0.655252 | 2_2:-9567829 | Msa0236630:CDS |
| GGTAATCTTTACGTATGCGG+TGG | 0.656082 | 2_2:-9568217 | Msa0236630:CDS |
| TGTGTTTCGATGCCTCACGA+TGG | 0.656289 | 2_2:-9568238 | Msa0236630:CDS |
| ACCACCGCTAACCTAAACTT+GGG | 0.656767 | 2_2:+9568613 | None:intergenic |
| GCATATTTGCTCAGGCAAAG+GGG | 0.660049 | 2_2:+9567694 | None:intergenic |
| CTAGTAACTCAAAATGCGCG+TGG | 0.665345 | 2_2:-9569663 | None:intergenic |
| ACGTAAAGATTACCATCGTG+AGG | 0.668276 | 2_2:+9568226 | None:intergenic |
| AGGGTGGACTGGTTCAAGCG+TGG | 0.672213 | 2_2:-9567813 | Msa0236630:CDS |
| GGGATGGTTTATGCAGCTGG+GGG | 0.673599 | 2_2:-9568070 | Msa0236630:CDS |
| GAACCCAAAAGAAAGTTGTG+AGG | 0.676488 | 2_2:-9567585 | Msa0236630:CDS |
| ACTGATCATTCGATTCATCA+CGG | 0.677591 | 2_2:+9568126 | None:intergenic |
| GGATGGTTTATGCAGCTGGG+GGG | 0.678556 | 2_2:-9568069 | Msa0236630:CDS |
| ACCCAAAAGAAAGTTGTGAG+GGG | 0.696628 | 2_2:-9567583 | Msa0236630:CDS |
| TAGCACCTGAGAGCTTGAAG+GGG | 0.706757 | 2_2:+9567499 | None:intergenic |
| GATGGTAATCTTTACGTATG+CGG | 0.716864 | 2_2:-9568220 | Msa0236630:CDS |
| GAAACACACCGAAAACCATG+AGG | 0.732405 | 2_2:+9568253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATAGCAAATTAA+AGG | + | chr2_2:9568225-9568244 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTCTTATTAAA+GGG | - | chr2_2:9568394-9568413 | Msa0236630:CDS | 10.0% |
| !!! | ATTTTTTTATAGCAAATTAA+AGG | + | chr2_2:9568225-9568244 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTCTTATTAAA+GGG | - | chr2_2:9568394-9568413 | Msa0236630:CDS | 10.0% |
| !!! | ATGATTAATTTTTTGCTAAT+AGG | + | chr2_2:9567562-9567581 | None:intergenic | 15.0% |
| !! | AATAAAAATCTCAACTTTAT+AGG | + | chr2_2:9567904-9567923 | None:intergenic | 15.0% |
| !!! | GTTTTATTGTTTCTTATTAA+AGG | - | chr2_2:9568393-9568412 | Msa0236630:CDS | 15.0% |
| !!! | ATGATTAATTTTTTGCTAAT+AGG | + | chr2_2:9567562-9567581 | None:intergenic | 15.0% |
| !! | AATAAAAATCTCAACTTTAT+AGG | + | chr2_2:9567904-9567923 | None:intergenic | 15.0% |
| !!! | GTTTTATTGTTTCTTATTAA+AGG | - | chr2_2:9568393-9568412 | Msa0236630:CDS | 15.0% |
| !! | TTAACACATACATAAATTCT+GGG | - | chr2_2:9567824-9567843 | Msa0236630:CDS | 20.0% |
| !!! | TTTTTATTTGATATTGCTTC+TGG | - | chr2_2:9567916-9567935 | Msa0236630:CDS | 20.0% |
| !!! | TTTTATTTGATATTGCTTCT+GGG | - | chr2_2:9567917-9567936 | Msa0236630:CDS | 20.0% |
| !! | ATCAGTTGAATATCTAATAA+GGG | - | chr2_2:9568102-9568121 | Msa0236630:CDS | 20.0% |
| !! | TTAACACATACATAAATTCT+GGG | - | chr2_2:9567824-9567843 | Msa0236630:CDS | 20.0% |
| !!! | TTTTTATTTGATATTGCTTC+TGG | - | chr2_2:9567916-9567935 | Msa0236630:CDS | 20.0% |
| !!! | TTTTATTTGATATTGCTTCT+GGG | - | chr2_2:9567917-9567936 | Msa0236630:CDS | 20.0% |
| !! | ATCAGTTGAATATCTAATAA+GGG | - | chr2_2:9568102-9568121 | Msa0236630:CDS | 20.0% |
| ! | GTTAACACATACATAAATTC+TGG | - | chr2_2:9567823-9567842 | Msa0236630:CDS | 25.0% |
| ! | TTTATAGGAAAATAACAGTG+AGG | + | chr2_2:9567889-9567908 | None:intergenic | 25.0% |
| ! | TTTATTTGATATTGCTTCTG+GGG | - | chr2_2:9567918-9567937 | Msa0236630:CDS | 25.0% |
| !!! | GTGCAAAATTATAGCTTTTT+TGG | - | chr2_2:9567983-9568002 | Msa0236630:CDS | 25.0% |
| ! | GATCAGTTGAATATCTAATA+AGG | - | chr2_2:9568101-9568120 | Msa0236630:CDS | 25.0% |
| ! | TCAGTTGAATATCTAATAAG+GGG | - | chr2_2:9568103-9568122 | Msa0236630:CDS | 25.0% |
| !!! | TGTTTTATTCTATCTGCTTT+TGG | - | chr2_2:9568138-9568157 | Msa0236630:CDS | 25.0% |
| !! | TTTTCTCTTTATTGTGGATT+AGG | - | chr2_2:9568188-9568207 | Msa0236630:CDS | 25.0% |
| ! | TATCTCTTGGATTGAAAATT+TGG | - | chr2_2:9568283-9568302 | Msa0236630:CDS | 25.0% |
| ! | TGTTTCTTATTAAAGGGTTT+AGG | - | chr2_2:9568400-9568419 | Msa0236630:CDS | 25.0% |
| ! | GAGATTTAACGATAAAGATA+AGG | - | chr2_2:9568432-9568451 | Msa0236630:CDS | 25.0% |
| !!! | AAGAGAGGTTTTTTACTAAT+AGG | - | chr2_2:9568723-9568742 | Msa0236630:intron | 25.0% |
| !! | TTTTACTAATAGGAAGCAAA+TGG | - | chr2_2:9568733-9568752 | Msa0236630:intron | 25.0% |
| ! | TTTACTAATAGGAAGCAAAT+GGG | - | chr2_2:9568734-9568753 | Msa0236630:intron | 25.0% |
| !! | GTCAAATTGGATAAACTTTT+AGG | + | chr2_2:9569622-9569641 | None:intergenic | 25.0% |
| ! | GTTAACACATACATAAATTC+TGG | - | chr2_2:9567823-9567842 | Msa0236630:CDS | 25.0% |
| ! | TTTATAGGAAAATAACAGTG+AGG | + | chr2_2:9567889-9567908 | None:intergenic | 25.0% |
| ! | TTTATTTGATATTGCTTCTG+GGG | - | chr2_2:9567918-9567937 | Msa0236630:CDS | 25.0% |
| !!! | GTGCAAAATTATAGCTTTTT+TGG | - | chr2_2:9567983-9568002 | Msa0236630:CDS | 25.0% |
| ! | GATCAGTTGAATATCTAATA+AGG | - | chr2_2:9568101-9568120 | Msa0236630:CDS | 25.0% |
| ! | TCAGTTGAATATCTAATAAG+GGG | - | chr2_2:9568103-9568122 | Msa0236630:CDS | 25.0% |
| !!! | TGTTTTATTCTATCTGCTTT+TGG | - | chr2_2:9568138-9568157 | Msa0236630:CDS | 25.0% |
| !! | TTTTCTCTTTATTGTGGATT+AGG | - | chr2_2:9568188-9568207 | Msa0236630:CDS | 25.0% |
| ! | TATCTCTTGGATTGAAAATT+TGG | - | chr2_2:9568283-9568302 | Msa0236630:CDS | 25.0% |
| ! | TGTTTCTTATTAAAGGGTTT+AGG | - | chr2_2:9568400-9568419 | Msa0236630:CDS | 25.0% |
| ! | GAGATTTAACGATAAAGATA+AGG | - | chr2_2:9568432-9568451 | Msa0236630:CDS | 25.0% |
| !!! | AAGAGAGGTTTTTTACTAAT+AGG | - | chr2_2:9568723-9568742 | Msa0236630:intron | 25.0% |
| !! | TTTTACTAATAGGAAGCAAA+TGG | - | chr2_2:9568733-9568752 | Msa0236630:intron | 25.0% |
| ! | TTTACTAATAGGAAGCAAAT+GGG | - | chr2_2:9568734-9568753 | Msa0236630:intron | 25.0% |
| !! | GTCAAATTGGATAAACTTTT+AGG | + | chr2_2:9569622-9569641 | None:intergenic | 25.0% |
| AGGAAGATTTGATTATTGTG+TGG | + | chr2_2:9567542-9567561 | None:intergenic | 30.0% | |
| TTTGTTTGTGAGGAGAAAAA+TGG | + | chr2_2:9567603-9567622 | None:intergenic | 30.0% | |
| ACAAAGAAAGAGATAAAGAC+TGG | + | chr2_2:9567640-9567659 | None:intergenic | 30.0% | |
| ATGAGATTCAATTCAGTTGA+AGG | + | chr2_2:9567688-9567707 | None:intergenic | 30.0% | |
| CTTACAAGAAGCAAATAAAG+TGG | + | chr2_2:9567727-9567746 | None:intergenic | 30.0% | |
| CAAAAACACACAAAGAAACA+AGG | + | chr2_2:9567780-9567799 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAGACATGTGAAT+TGG | - | chr2_2:9567946-9567965 | Msa0236630:CDS | 30.0% |
| !! | TTTTTGGAGACATGTGAATT+GGG | - | chr2_2:9567947-9567966 | Msa0236630:CDS | 30.0% |
| ! | TGAATTGGGTTATTTGCTTT+TGG | - | chr2_2:9567961-9567980 | Msa0236630:CDS | 30.0% |
| !!! | GTGCTTTTTTCTCTTTATTG+TGG | - | chr2_2:9568182-9568201 | Msa0236630:CDS | 30.0% |
| !! | CTTTATTGTGGATTAGGATT+TGG | - | chr2_2:9568194-9568213 | Msa0236630:CDS | 30.0% |
| TGGAATAGATTCTTATCTCT+TGG | - | chr2_2:9568270-9568289 | Msa0236630:CDS | 30.0% | |
| TATGCAAATACAAAAAGCCA+AGG | + | chr2_2:9568770-9568789 | None:intergenic | 30.0% | |
| TTTGCATATCATAAGTGTAC+TGG | - | chr2_2:9568782-9568801 | Msa0236630:intron | 30.0% | |
| !! | TTGATCTAACTCACTTTTCT+TGG | - | chr2_2:9568825-9568844 | Msa0236630:intron | 30.0% |
| GATTGTCAAATTTATGTCGT+AGG | - | chr2_2:9569493-9569512 | Msa0236630:intron | 30.0% | |
| AGGAAGATTTGATTATTGTG+TGG | + | chr2_2:9567542-9567561 | None:intergenic | 30.0% | |
| TTTGTTTGTGAGGAGAAAAA+TGG | + | chr2_2:9567603-9567622 | None:intergenic | 30.0% | |
| ACAAAGAAAGAGATAAAGAC+TGG | + | chr2_2:9567640-9567659 | None:intergenic | 30.0% | |
| ATGAGATTCAATTCAGTTGA+AGG | + | chr2_2:9567688-9567707 | None:intergenic | 30.0% | |
| CTTACAAGAAGCAAATAAAG+TGG | + | chr2_2:9567727-9567746 | None:intergenic | 30.0% | |
| CAAAAACACACAAAGAAACA+AGG | + | chr2_2:9567780-9567799 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAGACATGTGAAT+TGG | - | chr2_2:9567946-9567965 | Msa0236630:CDS | 30.0% |
| !! | TTTTTGGAGACATGTGAATT+GGG | - | chr2_2:9567947-9567966 | Msa0236630:CDS | 30.0% |
| ! | TGAATTGGGTTATTTGCTTT+TGG | - | chr2_2:9567961-9567980 | Msa0236630:CDS | 30.0% |
| !!! | GTGCTTTTTTCTCTTTATTG+TGG | - | chr2_2:9568182-9568201 | Msa0236630:CDS | 30.0% |
| !! | CTTTATTGTGGATTAGGATT+TGG | - | chr2_2:9568194-9568213 | Msa0236630:CDS | 30.0% |
| TGGAATAGATTCTTATCTCT+TGG | - | chr2_2:9568270-9568289 | Msa0236630:CDS | 30.0% | |
| TATGCAAATACAAAAAGCCA+AGG | + | chr2_2:9568770-9568789 | None:intergenic | 30.0% | |
| TTTGCATATCATAAGTGTAC+TGG | - | chr2_2:9568782-9568801 | Msa0236630:intron | 30.0% | |
| !! | TTGATCTAACTCACTTTTCT+TGG | - | chr2_2:9568825-9568844 | Msa0236630:intron | 30.0% |
| GATTGTCAAATTTATGTCGT+AGG | - | chr2_2:9569493-9569512 | Msa0236630:intron | 30.0% | |
| AAGCTAGTAGAGCAGATATA+AGG | + | chr2_2:9567511-9567530 | None:intergenic | 35.0% | |
| !!! | TGAAGACTGTTTTGTTTGTG+AGG | + | chr2_2:9567613-9567632 | None:intergenic | 35.0% |
| AGAAACAAGGTAAAGTGAAG+AGG | + | chr2_2:9567767-9567786 | None:intergenic | 35.0% | |
| !! | TATCTGCTTTTGGATCATTG+TGG | - | chr2_2:9568148-9568167 | Msa0236630:CDS | 35.0% |
| AAATGTGAGTGTATCAGCTT+AGG | - | chr2_2:9568241-9568260 | Msa0236630:CDS | 35.0% | |
| TGTATCAGCTTAGGAGAATT+TGG | - | chr2_2:9568250-9568269 | Msa0236630:CDS | 35.0% | |
| CACTATGTTCTCAAATTGGT+TGG | + | chr2_2:9568335-9568354 | None:intergenic | 35.0% | |
| CAACCAATTTGAGAACATAG+TGG | - | chr2_2:9568333-9568352 | Msa0236630:CDS | 35.0% | |
| CTTCCACTATGTTCTCAAAT+TGG | + | chr2_2:9568339-9568358 | None:intergenic | 35.0% | |
| CTTAGAGAATGATCTAACTC+TGG | + | chr2_2:9568578-9568597 | None:intergenic | 35.0% | |
| AAGAGAAGAACCCTTAATTC+CGG | - | chr2_2:9568595-9568614 | Msa0236630:CDS | 35.0% | |
| CAATTAAGAGCAACATCATC+AGG | + | chr2_2:9568626-9568645 | None:intergenic | 35.0% | |
| TAATTGTCTTCTTCGTCTTC+CGG | - | chr2_2:9568640-9568659 | Msa0236630:CDS | 35.0% | |
| TTCAAAGTCATTCATCCTGT+AGG | - | chr2_2:9568663-9568682 | Msa0236630:CDS | 35.0% | |
| TCAAAGTCATTCATCCTGTA+GGG | - | chr2_2:9568664-9568683 | Msa0236630:CDS | 35.0% | |
| ! | TGTTACTTGGTAGTAAAGAG+AGG | - | chr2_2:9568708-9568727 | Msa0236630:CDS | 35.0% |
| ! | AAATGGGTTTCAAAGATCCT+TGG | - | chr2_2:9568750-9568769 | Msa0236630:intron | 35.0% |
| AGTGTACTGGAAAGATTCAA+TGG | - | chr2_2:9568795-9568814 | Msa0236630:intron | 35.0% | |
| GATGGTAATCTTTACGTATG+CGG | - | chr2_2:9568920-9568939 | Msa0236630:intron | 35.0% | |
| TATTTCAACACCAAGTCAAG+AGG | + | chr2_2:9568971-9568990 | None:intergenic | 35.0% | |
| ATGAGATCACGAAAAATCGT+TGG | - | chr2_2:9568990-9569009 | Msa0236630:intron | 35.0% | |
| ACTGATCATTCGATTCATCA+CGG | + | chr2_2:9569017-9569036 | None:intergenic | 35.0% | |
| !! | TAGTACTGATCTTTATGAGC+TGG | - | chr2_2:9569096-9569115 | Msa0236630:intron | 35.0% |
| TTGTAACAGAAGGATGGTTA+TGG | - | chr2_2:9569224-9569243 | Msa0236630:intron | 35.0% | |
| GCTCAGAAACAACAAATAAG+TGG | + | chr2_2:9569363-9569382 | None:intergenic | 35.0% | |
| GAAGCTTAAGGTTTATAACC+AGG | - | chr2_2:9569393-9569412 | Msa0236630:intron | 35.0% | |
| AAAGGTTTGCATATTTGCTC+AGG | + | chr2_2:9569457-9569476 | None:intergenic | 35.0% | |
| !!! | ACTTTCTTTTGGGTTCAGTA+TGG | + | chr2_2:9569551-9569570 | None:intergenic | 35.0% |
| AACCCAAAAGAAAGTTGTGA+GGG | - | chr2_2:9569556-9569575 | Msa0236630:intron | 35.0% | |
| AATGGAACTTCAGTGTTCAA+TGG | - | chr2_2:9569581-9569600 | Msa0236630:intron | 35.0% | |
| AAGCTAGTAGAGCAGATATA+AGG | + | chr2_2:9567511-9567530 | None:intergenic | 35.0% | |
| !!! | TGAAGACTGTTTTGTTTGTG+AGG | + | chr2_2:9567613-9567632 | None:intergenic | 35.0% |
| AGAAACAAGGTAAAGTGAAG+AGG | + | chr2_2:9567767-9567786 | None:intergenic | 35.0% | |
| !! | TATCTGCTTTTGGATCATTG+TGG | - | chr2_2:9568148-9568167 | Msa0236630:CDS | 35.0% |
| AAATGTGAGTGTATCAGCTT+AGG | - | chr2_2:9568241-9568260 | Msa0236630:CDS | 35.0% | |
| TGTATCAGCTTAGGAGAATT+TGG | - | chr2_2:9568250-9568269 | Msa0236630:CDS | 35.0% | |
| CACTATGTTCTCAAATTGGT+TGG | + | chr2_2:9568335-9568354 | None:intergenic | 35.0% | |
| CAACCAATTTGAGAACATAG+TGG | - | chr2_2:9568333-9568352 | Msa0236630:CDS | 35.0% | |
| CTTCCACTATGTTCTCAAAT+TGG | + | chr2_2:9568339-9568358 | None:intergenic | 35.0% | |
| CTTAGAGAATGATCTAACTC+TGG | + | chr2_2:9568578-9568597 | None:intergenic | 35.0% | |
| AAGAGAAGAACCCTTAATTC+CGG | - | chr2_2:9568595-9568614 | Msa0236630:CDS | 35.0% | |
| CAATTAAGAGCAACATCATC+AGG | + | chr2_2:9568626-9568645 | None:intergenic | 35.0% | |
| TAATTGTCTTCTTCGTCTTC+CGG | - | chr2_2:9568640-9568659 | Msa0236630:CDS | 35.0% | |
| TTCAAAGTCATTCATCCTGT+AGG | - | chr2_2:9568663-9568682 | Msa0236630:CDS | 35.0% | |
| TCAAAGTCATTCATCCTGTA+GGG | - | chr2_2:9568664-9568683 | Msa0236630:CDS | 35.0% | |
| ! | TGTTACTTGGTAGTAAAGAG+AGG | - | chr2_2:9568708-9568727 | Msa0236630:CDS | 35.0% |
| ! | AAATGGGTTTCAAAGATCCT+TGG | - | chr2_2:9568750-9568769 | Msa0236630:intron | 35.0% |
| AGTGTACTGGAAAGATTCAA+TGG | - | chr2_2:9568795-9568814 | Msa0236630:intron | 35.0% | |
| GATGGTAATCTTTACGTATG+CGG | - | chr2_2:9568920-9568939 | Msa0236630:intron | 35.0% | |
| TATTTCAACACCAAGTCAAG+AGG | + | chr2_2:9568971-9568990 | None:intergenic | 35.0% | |
| ATGAGATCACGAAAAATCGT+TGG | - | chr2_2:9568990-9569009 | Msa0236630:intron | 35.0% | |
| ACTGATCATTCGATTCATCA+CGG | + | chr2_2:9569017-9569036 | None:intergenic | 35.0% | |
| !! | TAGTACTGATCTTTATGAGC+TGG | - | chr2_2:9569096-9569115 | Msa0236630:intron | 35.0% |
| TTGTAACAGAAGGATGGTTA+TGG | - | chr2_2:9569224-9569243 | Msa0236630:intron | 35.0% | |
| GCTCAGAAACAACAAATAAG+TGG | + | chr2_2:9569363-9569382 | None:intergenic | 35.0% | |
| GAAGCTTAAGGTTTATAACC+AGG | - | chr2_2:9569393-9569412 | Msa0236630:intron | 35.0% | |
| AAAGGTTTGCATATTTGCTC+AGG | + | chr2_2:9569457-9569476 | None:intergenic | 35.0% | |
| !!! | ACTTTCTTTTGGGTTCAGTA+TGG | + | chr2_2:9569551-9569570 | None:intergenic | 35.0% |
| AACCCAAAAGAAAGTTGTGA+GGG | - | chr2_2:9569556-9569575 | Msa0236630:intron | 35.0% | |
| AATGGAACTTCAGTGTTCAA+TGG | - | chr2_2:9569581-9569600 | Msa0236630:intron | 35.0% | |
| !! | CTAGCTTTTTACGAAGTAGC+AGG | - | chr2_2:9568035-9568054 | Msa0236630:CDS | 40.0% |
| ! | ATTTTCGTCTCAACAAGCAC+CGG | - | chr2_2:9568469-9568488 | Msa0236630:CDS | 40.0% |
| !! | TTGGGAGATAGTGTCATTTG+AGG | + | chr2_2:9568512-9568531 | None:intergenic | 40.0% |
| TGACACTATCTCCCAAGTTT+AGG | - | chr2_2:9568516-9568535 | Msa0236630:CDS | 40.0% | |
| ! | ATCTCCCAAGTTTAGGTTAG+CGG | - | chr2_2:9568523-9568542 | Msa0236630:CDS | 40.0% |
| GAATGATCTAACTCTGGCAT+CGG | + | chr2_2:9568572-9568591 | None:intergenic | 40.0% | |
| AGAGAAGAACCCTTAATTCC+GGG | - | chr2_2:9568596-9568615 | Msa0236630:CDS | 40.0% | |
| CAGGATGAATGACTTTGAAC+CGG | + | chr2_2:9568662-9568681 | None:intergenic | 40.0% | |
| AAGAGGTGGCATATGTTACT+TGG | - | chr2_2:9568695-9568714 | Msa0236630:CDS | 40.0% | |
| TACTGGAAAGATTCAATGGC+AGG | - | chr2_2:9568799-9568818 | Msa0236630:intron | 40.0% | |
| ! | AGGTTTGTCCTCATGGTTTT+CGG | - | chr2_2:9568879-9568898 | Msa0236630:intron | 40.0% |
| ACGTAAAGATTACCATCGTG+AGG | + | chr2_2:9568917-9568936 | None:intergenic | 40.0% | |
| TGAATCGAATGATCAGTGCT+AGG | - | chr2_2:9569020-9569039 | Msa0236630:intron | 40.0% | |
| ! | GAGGTATTAGATCCGATTAG+CGG | - | chr2_2:9569127-9569146 | Msa0236630:intron | 40.0% |
| AGGTATTAGATCCGATTAGC+GGG | - | chr2_2:9569128-9569147 | Msa0236630:intron | 40.0% | |
| AGCATCATAGGATGCCATAT+TGG | + | chr2_2:9569182-9569201 | None:intergenic | 40.0% | |
| !! | TATGATGCTGCAGTTCTGAA+CGG | - | chr2_2:9569193-9569212 | Msa0236630:intron | 40.0% |
| AACTGCTTGTAACAGAAGGA+TGG | - | chr2_2:9569218-9569237 | Msa0236630:intron | 40.0% | |
| ! | CCTCTAGGAGAGACATAAAA+AGG | + | chr2_2:9569250-9569269 | None:intergenic | 40.0% |
| ! | CCTTTTTATGTCTCTCCTAG+AGG | - | chr2_2:9569247-9569266 | Msa0236630:intron | 40.0% |
| AACCAATAGCTGGGAAACTA+TGG | - | chr2_2:9569288-9569307 | Msa0236630:intron | 40.0% | |
| GCTCGAAAGAATGAAGCTTA+AGG | - | chr2_2:9569381-9569400 | Msa0236630:intron | 40.0% | |
| TGCATATTTGCTCAGGCAAA+GGG | + | chr2_2:9569450-9569469 | None:intergenic | 40.0% | |
| TTGCATATTTGCTCAGGCAA+AGG | + | chr2_2:9569451-9569470 | None:intergenic | 40.0% | |
| TCACAAGCATTCACAGCAAA+AGG | + | chr2_2:9569475-9569494 | None:intergenic | 40.0% | |
| GTCAAATTTATGTCGTAGGC+CGG | - | chr2_2:9569497-9569516 | Msa0236630:intron | 40.0% | |
| GAACCCAAAAGAAAGTTGTG+AGG | - | chr2_2:9569555-9569574 | Msa0236630:intron | 40.0% | |
| ACCCAAAAGAAAGTTGTGAG+GGG | - | chr2_2:9569557-9569576 | Msa0236630:intron | 40.0% | |
| ! | TCCCCTCACAACTTTCTTTT+GGG | + | chr2_2:9569561-9569580 | None:intergenic | 40.0% |
| ! | TTCCCCTCACAACTTTCTTT+TGG | + | chr2_2:9569562-9569581 | None:intergenic | 40.0% |
| AAGAAAGTTGTGAGGGGAAA+TGG | - | chr2_2:9569563-9569582 | Msa0236630:intron | 40.0% | |
| !! | CTAGCTTTTTACGAAGTAGC+AGG | - | chr2_2:9568035-9568054 | Msa0236630:CDS | 40.0% |
| ! | ATTTTCGTCTCAACAAGCAC+CGG | - | chr2_2:9568469-9568488 | Msa0236630:CDS | 40.0% |
| !! | TTGGGAGATAGTGTCATTTG+AGG | + | chr2_2:9568512-9568531 | None:intergenic | 40.0% |
| TGACACTATCTCCCAAGTTT+AGG | - | chr2_2:9568516-9568535 | Msa0236630:CDS | 40.0% | |
| ! | ATCTCCCAAGTTTAGGTTAG+CGG | - | chr2_2:9568523-9568542 | Msa0236630:CDS | 40.0% |
| GAATGATCTAACTCTGGCAT+CGG | + | chr2_2:9568572-9568591 | None:intergenic | 40.0% | |
| AGAGAAGAACCCTTAATTCC+GGG | - | chr2_2:9568596-9568615 | Msa0236630:CDS | 40.0% | |
| CAGGATGAATGACTTTGAAC+CGG | + | chr2_2:9568662-9568681 | None:intergenic | 40.0% | |
| AAGAGGTGGCATATGTTACT+TGG | - | chr2_2:9568695-9568714 | Msa0236630:CDS | 40.0% | |
| TACTGGAAAGATTCAATGGC+AGG | - | chr2_2:9568799-9568818 | Msa0236630:intron | 40.0% | |
| ! | AGGTTTGTCCTCATGGTTTT+CGG | - | chr2_2:9568879-9568898 | Msa0236630:intron | 40.0% |
| ACGTAAAGATTACCATCGTG+AGG | + | chr2_2:9568917-9568936 | None:intergenic | 40.0% | |
| TGAATCGAATGATCAGTGCT+AGG | - | chr2_2:9569020-9569039 | Msa0236630:intron | 40.0% | |
| ! | GAGGTATTAGATCCGATTAG+CGG | - | chr2_2:9569127-9569146 | Msa0236630:intron | 40.0% |
| AGGTATTAGATCCGATTAGC+GGG | - | chr2_2:9569128-9569147 | Msa0236630:intron | 40.0% | |
| AGCATCATAGGATGCCATAT+TGG | + | chr2_2:9569182-9569201 | None:intergenic | 40.0% | |
| !! | TATGATGCTGCAGTTCTGAA+CGG | - | chr2_2:9569193-9569212 | Msa0236630:intron | 40.0% |
| AACTGCTTGTAACAGAAGGA+TGG | - | chr2_2:9569218-9569237 | Msa0236630:intron | 40.0% | |
| ! | CCTCTAGGAGAGACATAAAA+AGG | + | chr2_2:9569250-9569269 | None:intergenic | 40.0% |
| ! | CCTTTTTATGTCTCTCCTAG+AGG | - | chr2_2:9569247-9569266 | Msa0236630:intron | 40.0% |
| AACCAATAGCTGGGAAACTA+TGG | - | chr2_2:9569288-9569307 | Msa0236630:intron | 40.0% | |
| GCTCGAAAGAATGAAGCTTA+AGG | - | chr2_2:9569381-9569400 | Msa0236630:intron | 40.0% | |
| TGCATATTTGCTCAGGCAAA+GGG | + | chr2_2:9569450-9569469 | None:intergenic | 40.0% | |
| TTGCATATTTGCTCAGGCAA+AGG | + | chr2_2:9569451-9569470 | None:intergenic | 40.0% | |
| TCACAAGCATTCACAGCAAA+AGG | + | chr2_2:9569475-9569494 | None:intergenic | 40.0% | |
| GTCAAATTTATGTCGTAGGC+CGG | - | chr2_2:9569497-9569516 | Msa0236630:intron | 40.0% | |
| GAACCCAAAAGAAAGTTGTG+AGG | - | chr2_2:9569555-9569574 | Msa0236630:intron | 40.0% | |
| ACCCAAAAGAAAGTTGTGAG+GGG | - | chr2_2:9569557-9569576 | Msa0236630:intron | 40.0% | |
| ! | TCCCCTCACAACTTTCTTTT+GGG | + | chr2_2:9569561-9569580 | None:intergenic | 40.0% |
| ! | TTCCCCTCACAACTTTCTTT+TGG | + | chr2_2:9569562-9569581 | None:intergenic | 40.0% |
| AAGAAAGTTGTGAGGGGAAA+TGG | - | chr2_2:9569563-9569582 | Msa0236630:intron | 40.0% | |
| !!! | GCTTCTGGGGTGTTGTTTTT+TGG | - | chr2_2:9567931-9567950 | Msa0236630:CDS | 45.0% |
| !! | CTGCTTTTGGATCATTGTGG+AGG | - | chr2_2:9568151-9568170 | Msa0236630:CDS | 45.0% |
| ! | CTTTTGGATCATTGTGGAGG+AGG | - | chr2_2:9568154-9568173 | Msa0236630:CDS | 45.0% |
| GATCATTGTGGAGGAGGAAT+TGG | - | chr2_2:9568160-9568179 | Msa0236630:CDS | 45.0% | |
| ACCACCGCTAACCTAAACTT+GGG | + | chr2_2:9568530-9568549 | None:intergenic | 45.0% | |
| AACCACCGCTAACCTAAACT+TGG | + | chr2_2:9568531-9568550 | None:intergenic | 45.0% | |
| TCAGGTAAGCCCGGAATTAA+GGG | + | chr2_2:9568608-9568627 | None:intergenic | 45.0% | |
| ATCAGGTAAGCCCGGAATTA+AGG | + | chr2_2:9568609-9568628 | None:intergenic | 45.0% | |
| AAGGACAAGGTTTGTCCTCA+TGG | - | chr2_2:9568872-9568891 | Msa0236630:intron | 45.0% | |
| GAAACACACCGAAAACCATG+AGG | + | chr2_2:9568890-9568909 | None:intergenic | 45.0% | |
| GGTAATCTTTACGTATGCGG+TGG | - | chr2_2:9568923-9568942 | Msa0236630:intron | 45.0% | |
| !!! | GCTAGGTCATTTTTTGCCAG+TGG | - | chr2_2:9569037-9569056 | Msa0236630:intron | 45.0% |
| TTTGCCAGTGGAGTAATCGA+TGG | - | chr2_2:9569049-9569068 | Msa0236630:intron | 45.0% | |
| TTGCCAGTGGAGTAATCGAT+GGG | - | chr2_2:9569050-9569069 | Msa0236630:intron | 45.0% | |
| ATGGGATGGTTTATGCAGCT+GGG | - | chr2_2:9569068-9569087 | Msa0236630:intron | 45.0% | |
| TTATGAGCTGGATTCAGCTG+AGG | - | chr2_2:9569108-9569127 | Msa0236630:intron | 45.0% | |
| TAGATCCGATTAGCGGGAAT+TGG | - | chr2_2:9569134-9569153 | Msa0236630:intron | 45.0% | |
| TGCCAACATGGGAACCAATA+TGG | - | chr2_2:9569165-9569184 | Msa0236630:intron | 45.0% | |
| !! | TGCCATATTGGTTCCCATGT+TGG | + | chr2_2:9569170-9569189 | None:intergenic | 45.0% |
| GTTCAGAACTGCAGCATCAT+AGG | + | chr2_2:9569194-9569213 | None:intergenic | 45.0% | |
| !! | ATGATGCTGCAGTTCTGAAC+GGG | - | chr2_2:9569194-9569213 | Msa0236630:intron | 45.0% |
| GGGAAACTGCTTGTAACAGA+AGG | - | chr2_2:9569214-9569233 | Msa0236630:intron | 45.0% | |
| TTATGTCTCTCCTAGAGGAC+AGG | - | chr2_2:9569252-9569271 | Msa0236630:intron | 45.0% | |
| !! | GTTTCCCAGCTATTGGTTCT+CGG | + | chr2_2:9569286-9569305 | None:intergenic | 45.0% |
| AGCCATAGTTTCCCAGCTAT+TGG | + | chr2_2:9569293-9569312 | None:intergenic | 45.0% | |
| ATGGCTGTTGGACTTAGAGA+AGG | - | chr2_2:9569307-9569326 | Msa0236630:intron | 45.0% | |
| TGGCTGTTGGACTTAGAGAA+GGG | - | chr2_2:9569308-9569327 | Msa0236630:intron | 45.0% | |
| GGTTCAAGCGTGGTTGTTTA+TGG | - | chr2_2:9569337-9569356 | Msa0236630:intron | 45.0% | |
| ATCTATGGCTTCCCAGGAAT+CGG | + | chr2_2:9569422-9569441 | None:intergenic | 45.0% | |
| GCATATTTGCTCAGGCAAAG+GGG | + | chr2_2:9569449-9569468 | None:intergenic | 45.0% | |
| CAACAGCAACCAGAAGATTC+CGG | + | chr2_2:9569519-9569538 | None:intergenic | 45.0% | |
| AGAGCTTGAAGGGGTCAAAT+TGG | + | chr2_2:9569635-9569654 | None:intergenic | 45.0% | |
| ATAGCACCTGAGAGCTTGAA+GGG | + | chr2_2:9569645-9569664 | None:intergenic | 45.0% | |
| AATAGCACCTGAGAGCTTGA+AGG | + | chr2_2:9569646-9569665 | None:intergenic | 45.0% | |
| !!! | GCTTCTGGGGTGTTGTTTTT+TGG | - | chr2_2:9567931-9567950 | Msa0236630:CDS | 45.0% |
| !! | CTGCTTTTGGATCATTGTGG+AGG | - | chr2_2:9568151-9568170 | Msa0236630:CDS | 45.0% |
| ! | CTTTTGGATCATTGTGGAGG+AGG | - | chr2_2:9568154-9568173 | Msa0236630:CDS | 45.0% |
| GATCATTGTGGAGGAGGAAT+TGG | - | chr2_2:9568160-9568179 | Msa0236630:CDS | 45.0% | |
| ACCACCGCTAACCTAAACTT+GGG | + | chr2_2:9568530-9568549 | None:intergenic | 45.0% | |
| AACCACCGCTAACCTAAACT+TGG | + | chr2_2:9568531-9568550 | None:intergenic | 45.0% | |
| TCAGGTAAGCCCGGAATTAA+GGG | + | chr2_2:9568608-9568627 | None:intergenic | 45.0% | |
| ATCAGGTAAGCCCGGAATTA+AGG | + | chr2_2:9568609-9568628 | None:intergenic | 45.0% | |
| AAGGACAAGGTTTGTCCTCA+TGG | - | chr2_2:9568872-9568891 | Msa0236630:intron | 45.0% | |
| GAAACACACCGAAAACCATG+AGG | + | chr2_2:9568890-9568909 | None:intergenic | 45.0% | |
| GGTAATCTTTACGTATGCGG+TGG | - | chr2_2:9568923-9568942 | Msa0236630:intron | 45.0% | |
| !!! | GCTAGGTCATTTTTTGCCAG+TGG | - | chr2_2:9569037-9569056 | Msa0236630:intron | 45.0% |
| TTTGCCAGTGGAGTAATCGA+TGG | - | chr2_2:9569049-9569068 | Msa0236630:intron | 45.0% | |
| TTGCCAGTGGAGTAATCGAT+GGG | - | chr2_2:9569050-9569069 | Msa0236630:intron | 45.0% | |
| ATGGGATGGTTTATGCAGCT+GGG | - | chr2_2:9569068-9569087 | Msa0236630:intron | 45.0% | |
| TTATGAGCTGGATTCAGCTG+AGG | - | chr2_2:9569108-9569127 | Msa0236630:intron | 45.0% | |
| TAGATCCGATTAGCGGGAAT+TGG | - | chr2_2:9569134-9569153 | Msa0236630:intron | 45.0% | |
| TGCCAACATGGGAACCAATA+TGG | - | chr2_2:9569165-9569184 | Msa0236630:intron | 45.0% | |
| !! | TGCCATATTGGTTCCCATGT+TGG | + | chr2_2:9569170-9569189 | None:intergenic | 45.0% |
| GTTCAGAACTGCAGCATCAT+AGG | + | chr2_2:9569194-9569213 | None:intergenic | 45.0% | |
| !! | ATGATGCTGCAGTTCTGAAC+GGG | - | chr2_2:9569194-9569213 | Msa0236630:intron | 45.0% |
| GGGAAACTGCTTGTAACAGA+AGG | - | chr2_2:9569214-9569233 | Msa0236630:intron | 45.0% | |
| TTATGTCTCTCCTAGAGGAC+AGG | - | chr2_2:9569252-9569271 | Msa0236630:intron | 45.0% | |
| !! | GTTTCCCAGCTATTGGTTCT+CGG | + | chr2_2:9569286-9569305 | None:intergenic | 45.0% |
| AGCCATAGTTTCCCAGCTAT+TGG | + | chr2_2:9569293-9569312 | None:intergenic | 45.0% | |
| ATGGCTGTTGGACTTAGAGA+AGG | - | chr2_2:9569307-9569326 | Msa0236630:intron | 45.0% | |
| TGGCTGTTGGACTTAGAGAA+GGG | - | chr2_2:9569308-9569327 | Msa0236630:intron | 45.0% | |
| GGTTCAAGCGTGGTTGTTTA+TGG | - | chr2_2:9569337-9569356 | Msa0236630:intron | 45.0% | |
| ATCTATGGCTTCCCAGGAAT+CGG | + | chr2_2:9569422-9569441 | None:intergenic | 45.0% | |
| GCATATTTGCTCAGGCAAAG+GGG | + | chr2_2:9569449-9569468 | None:intergenic | 45.0% | |
| CAACAGCAACCAGAAGATTC+CGG | + | chr2_2:9569519-9569538 | None:intergenic | 45.0% | |
| AGAGCTTGAAGGGGTCAAAT+TGG | + | chr2_2:9569635-9569654 | None:intergenic | 45.0% | |
| ATAGCACCTGAGAGCTTGAA+GGG | + | chr2_2:9569645-9569664 | None:intergenic | 45.0% | |
| AATAGCACCTGAGAGCTTGA+AGG | + | chr2_2:9569646-9569665 | None:intergenic | 45.0% | |
| ! | GGATCACCTAGCTTGTGAAC+CGG | + | chr2_2:9568491-9568510 | None:intergenic | 50.0% |
| ! | TCCCAAGTTTAGGTTAGCGG+TGG | - | chr2_2:9568526-9568545 | Msa0236630:CDS | 50.0% |
| GCAACATCATCAGGTAAGCC+CGG | + | chr2_2:9568617-9568636 | None:intergenic | 50.0% | |
| !! | TGTCCTTGCAAGGCATTGCA+GGG | + | chr2_2:9568859-9568878 | None:intergenic | 50.0% |
| !! | TTGTCCTTGCAAGGCATTGC+AGG | + | chr2_2:9568860-9568879 | None:intergenic | 50.0% |
| TGCAATGCCTTGCAAGGACA+AGG | - | chr2_2:9568859-9568878 | Msa0236630:intron | 50.0% | |
| GGACAAACCTTGTCCTTGCA+AGG | + | chr2_2:9568869-9568888 | None:intergenic | 50.0% | |
| TGTGTTTCGATGCCTCACGA+TGG | - | chr2_2:9568902-9568921 | Msa0236630:intron | 50.0% | |
| TCTTTACGTATGCGGTGGCA+TGG | - | chr2_2:9568928-9568947 | Msa0236630:intron | 50.0% | |
| ! | CGTGGATTGTCCTCTTGACT+TGG | - | chr2_2:9568958-9568977 | Msa0236630:intron | 50.0% |
| ! | CATCCCATCGATTACTCCAC+TGG | + | chr2_2:9569056-9569075 | None:intergenic | 50.0% |
| CAGTGGAGTAATCGATGGGA+TGG | - | chr2_2:9569054-9569073 | Msa0236630:intron | 50.0% | |
| GATGGGATGGTTTATGCAGC+TGG | - | chr2_2:9569067-9569086 | Msa0236630:intron | 50.0% | |
| TGGGATGGTTTATGCAGCTG+GGG | - | chr2_2:9569069-9569088 | Msa0236630:intron | 50.0% | |
| ACGATCCGAGAACCAATAGC+TGG | - | chr2_2:9569278-9569297 | Msa0236630:intron | 50.0% | |
| CGATCCGAGAACCAATAGCT+GGG | - | chr2_2:9569279-9569298 | Msa0236630:intron | 50.0% | |
| AGCTGGGAAACTATGGCTGT+TGG | - | chr2_2:9569295-9569314 | Msa0236630:intron | 50.0% | |
| CTGTTGGACTTAGAGAAGGG+TGG | - | chr2_2:9569311-9569330 | Msa0236630:intron | 50.0% | |
| ! | ATAACCAGGAAGCCGATTCC+TGG | - | chr2_2:9569407-9569426 | Msa0236630:intron | 50.0% |
| ! | TAACCAGGAAGCCGATTCCT+GGG | - | chr2_2:9569408-9569427 | Msa0236630:intron | 50.0% |
| GATTCCTGGGAAGCCATAGA+TGG | - | chr2_2:9569421-9569440 | Msa0236630:intron | 50.0% | |
| ! | CGGAATCTTCTGGTTGCTGT+TGG | - | chr2_2:9569517-9569536 | Msa0236630:intron | 50.0% |
| TTTGACCCCTTCAAGCTCTC+AGG | - | chr2_2:9569636-9569655 | Msa0236630:intron | 50.0% | |
| TAGCACCTGAGAGCTTGAAG+GGG | + | chr2_2:9569644-9569663 | None:intergenic | 50.0% | |
| ! | GGATCACCTAGCTTGTGAAC+CGG | + | chr2_2:9568491-9568510 | None:intergenic | 50.0% |
| ! | TCCCAAGTTTAGGTTAGCGG+TGG | - | chr2_2:9568526-9568545 | Msa0236630:CDS | 50.0% |
| GCAACATCATCAGGTAAGCC+CGG | + | chr2_2:9568617-9568636 | None:intergenic | 50.0% | |
| !! | TGTCCTTGCAAGGCATTGCA+GGG | + | chr2_2:9568859-9568878 | None:intergenic | 50.0% |
| !! | TTGTCCTTGCAAGGCATTGC+AGG | + | chr2_2:9568860-9568879 | None:intergenic | 50.0% |
| TGCAATGCCTTGCAAGGACA+AGG | - | chr2_2:9568859-9568878 | Msa0236630:intron | 50.0% | |
| GGACAAACCTTGTCCTTGCA+AGG | + | chr2_2:9568869-9568888 | None:intergenic | 50.0% | |
| TGTGTTTCGATGCCTCACGA+TGG | - | chr2_2:9568902-9568921 | Msa0236630:intron | 50.0% | |
| TCTTTACGTATGCGGTGGCA+TGG | - | chr2_2:9568928-9568947 | Msa0236630:intron | 50.0% | |
| ! | CGTGGATTGTCCTCTTGACT+TGG | - | chr2_2:9568958-9568977 | Msa0236630:intron | 50.0% |
| ! | CATCCCATCGATTACTCCAC+TGG | + | chr2_2:9569056-9569075 | None:intergenic | 50.0% |
| CAGTGGAGTAATCGATGGGA+TGG | - | chr2_2:9569054-9569073 | Msa0236630:intron | 50.0% | |
| GATGGGATGGTTTATGCAGC+TGG | - | chr2_2:9569067-9569086 | Msa0236630:intron | 50.0% | |
| TGGGATGGTTTATGCAGCTG+GGG | - | chr2_2:9569069-9569088 | Msa0236630:intron | 50.0% | |
| ACGATCCGAGAACCAATAGC+TGG | - | chr2_2:9569278-9569297 | Msa0236630:intron | 50.0% | |
| CGATCCGAGAACCAATAGCT+GGG | - | chr2_2:9569279-9569298 | Msa0236630:intron | 50.0% | |
| AGCTGGGAAACTATGGCTGT+TGG | - | chr2_2:9569295-9569314 | Msa0236630:intron | 50.0% | |
| CTGTTGGACTTAGAGAAGGG+TGG | - | chr2_2:9569311-9569330 | Msa0236630:intron | 50.0% | |
| ! | ATAACCAGGAAGCCGATTCC+TGG | - | chr2_2:9569407-9569426 | Msa0236630:intron | 50.0% |
| ! | TAACCAGGAAGCCGATTCCT+GGG | - | chr2_2:9569408-9569427 | Msa0236630:intron | 50.0% |
| GATTCCTGGGAAGCCATAGA+TGG | - | chr2_2:9569421-9569440 | Msa0236630:intron | 50.0% | |
| ! | CGGAATCTTCTGGTTGCTGT+TGG | - | chr2_2:9569517-9569536 | Msa0236630:intron | 50.0% |
| TTTGACCCCTTCAAGCTCTC+AGG | - | chr2_2:9569636-9569655 | Msa0236630:intron | 50.0% | |
| TAGCACCTGAGAGCTTGAAG+GGG | + | chr2_2:9569644-9569663 | None:intergenic | 50.0% | |
| !! | CAAGCACCGGTTCACAAGCT+AGG | - | chr2_2:9568482-9568501 | Msa0236630:CDS | 55.0% |
| !! | CTTGCAAGGCATTGCAGGGA+TGG | + | chr2_2:9568855-9568874 | None:intergenic | 55.0% |
| CATCCCTGCAATGCCTTGCA+AGG | - | chr2_2:9568853-9568872 | Msa0236630:intron | 55.0% | |
| GGGATGGTTTATGCAGCTGG+GGG | - | chr2_2:9569070-9569089 | Msa0236630:intron | 55.0% | |
| GGATGGTTTATGCAGCTGGG+GGG | - | chr2_2:9569071-9569090 | Msa0236630:intron | 55.0% | |
| TTGGCGCGCTATTGCCAACA+TGG | - | chr2_2:9569153-9569172 | Msa0236630:intron | 55.0% | |
| TGGCGCGCTATTGCCAACAT+GGG | - | chr2_2:9569154-9569173 | Msa0236630:intron | 55.0% | |
| GGATCGTAGACCTGTCCTCT+AGG | + | chr2_2:9569265-9569284 | None:intergenic | 55.0% | |
| GGACTTAGAGAAGGGTGGAC+TGG | - | chr2_2:9569316-9569335 | Msa0236630:intron | 55.0% | |
| AGGCAAAGGGGAGCCATCTA+TGG | + | chr2_2:9569437-9569456 | None:intergenic | 55.0% | |
| TGTCGTAGGCCGGAATCTTC+TGG | - | chr2_2:9569507-9569526 | Msa0236630:intron | 55.0% | |
| !! | CAAGCACCGGTTCACAAGCT+AGG | - | chr2_2:9568482-9568501 | Msa0236630:CDS | 55.0% |
| !! | CTTGCAAGGCATTGCAGGGA+TGG | + | chr2_2:9568855-9568874 | None:intergenic | 55.0% |
| CATCCCTGCAATGCCTTGCA+AGG | - | chr2_2:9568853-9568872 | Msa0236630:intron | 55.0% | |
| GGGATGGTTTATGCAGCTGG+GGG | - | chr2_2:9569070-9569089 | Msa0236630:intron | 55.0% | |
| GGATGGTTTATGCAGCTGGG+GGG | - | chr2_2:9569071-9569090 | Msa0236630:intron | 55.0% | |
| TTGGCGCGCTATTGCCAACA+TGG | - | chr2_2:9569153-9569172 | Msa0236630:intron | 55.0% | |
| TGGCGCGCTATTGCCAACAT+GGG | - | chr2_2:9569154-9569173 | Msa0236630:intron | 55.0% | |
| GGATCGTAGACCTGTCCTCT+AGG | + | chr2_2:9569265-9569284 | None:intergenic | 55.0% | |
| GGACTTAGAGAAGGGTGGAC+TGG | - | chr2_2:9569316-9569335 | Msa0236630:intron | 55.0% | |
| AGGCAAAGGGGAGCCATCTA+TGG | + | chr2_2:9569437-9569456 | None:intergenic | 55.0% | |
| TGTCGTAGGCCGGAATCTTC+TGG | - | chr2_2:9569507-9569526 | Msa0236630:intron | 55.0% | |
| CCTCTTGCAGACAGCCCTAC+AGG | + | chr2_2:9568681-9568700 | None:intergenic | 60.0% | |
| CCTGTAGGGCTGTCTGCAAG+AGG | - | chr2_2:9568678-9568697 | Msa0236630:CDS | 60.0% | |
| GTAGGGCTGTCTGCAAGAGG+TGG | - | chr2_2:9568681-9568700 | Msa0236630:CDS | 60.0% | |
| GCGCGCCAATTCCCGCTAAT+CGG | + | chr2_2:9569142-9569161 | None:intergenic | 60.0% | |
| !! | AGGGTGGACTGGTTCAAGCG+TGG | - | chr2_2:9569327-9569346 | Msa0236630:intron | 60.0% |
| ! | CTTCCCAGGAATCGGCTTCC+TGG | + | chr2_2:9569414-9569433 | None:intergenic | 60.0% |
| GGAGCCATCTATGGCTTCCC+AGG | + | chr2_2:9569428-9569447 | None:intergenic | 60.0% | |
| CCTCTTGCAGACAGCCCTAC+AGG | + | chr2_2:9568681-9568700 | None:intergenic | 60.0% | |
| CCTGTAGGGCTGTCTGCAAG+AGG | - | chr2_2:9568678-9568697 | Msa0236630:CDS | 60.0% | |
| GTAGGGCTGTCTGCAAGAGG+TGG | - | chr2_2:9568681-9568700 | Msa0236630:CDS | 60.0% | |
| GCGCGCCAATTCCCGCTAAT+CGG | + | chr2_2:9569142-9569161 | None:intergenic | 60.0% | |
| !! | AGGGTGGACTGGTTCAAGCG+TGG | - | chr2_2:9569327-9569346 | Msa0236630:intron | 60.0% |
| ! | CTTCCCAGGAATCGGCTTCC+TGG | + | chr2_2:9569414-9569433 | None:intergenic | 60.0% |
| GGAGCCATCTATGGCTTCCC+AGG | + | chr2_2:9569428-9569447 | None:intergenic | 60.0% | |
| CGGTGGCATGGTCTCTGACG+TGG | - | chr2_2:9568940-9568959 | Msa0236630:intron | 65.0% | |
| CGGTGGCATGGTCTCTGACG+TGG | - | chr2_2:9568940-9568959 | Msa0236630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 9567490 | 9569672 | 9567490 | ID=Msa0236630;Name=Msa0236630 |
| chr2_2 | mRNA | 9567490 | 9569672 | 9567490 | ID=Msa0236630-mRNA-1;Parent=Msa0236630;Name=Msa0236630-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.75|1|1|4|0|419 |
| chr2_2 | exon | 9569664 | 9569672 | 9569664 | ID=Msa0236630-mRNA-1:exon:4168;Parent=Msa0236630-mRNA-1 |
| chr2_2 | exon | 9568947 | 9568952 | 9568947 | ID=Msa0236630-mRNA-1:exon:4167;Parent=Msa0236630-mRNA-1 |
| chr2_2 | exon | 9568741 | 9568747 | 9568741 | ID=Msa0236630-mRNA-1:exon:4166;Parent=Msa0236630-mRNA-1 |
| chr2_2 | exon | 9567490 | 9568727 | 9567490 | ID=Msa0236630-mRNA-1:exon:4165;Parent=Msa0236630-mRNA-1 |
| chr2_2 | CDS | 9569664 | 9569672 | 9569664 | ID=Msa0236630-mRNA-1:cds;Parent=Msa0236630-mRNA-1 |
| chr2_2 | CDS | 9568947 | 9568952 | 9568947 | ID=Msa0236630-mRNA-1:cds;Parent=Msa0236630-mRNA-1 |
| chr2_2 | CDS | 9568741 | 9568747 | 9568741 | ID=Msa0236630-mRNA-1:cds;Parent=Msa0236630-mRNA-1 |
| chr2_2 | CDS | 9567490 | 9568727 | 9567490 | ID=Msa0236630-mRNA-1:cds;Parent=Msa0236630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
