AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0192970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192970 MtrunA17_Chr2g0283611 67.619 315 90 4 1 306 1 312 1.25e-137 392
Msa0192970 MtrunA17_Chr1g0178491 35.256 156 90 4 17 164 36 188 5.22e-22 94.7
Msa0192970 MtrunA17_Chr2g0283601 89.130 46 5 0 1 46 1 46 9.85e-22 87.4
Msa0192970 MtrunA17_Chr2g0283601 75.556 45 11 0 262 306 42 86 1.57e-17 76.3
Msa0192970 MtrunA17_Chr7g0266441 29.448 163 98 4 17 165 32 191 3.69e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192970 AT4G10660.1 31.515 165 96 6 74 229 38 194 1.51e-16 79.0
Msa0192970 AT1G49360.1 31.878 229 125 11 9 214 100 320 1.21e-14 74.7
Msa0192970 AT1G49360.5 31.878 229 125 11 9 214 77 297 1.22e-14 74.3
Msa0192970 AT1G49360.3 32.110 218 117 11 20 214 8 217 2.20e-14 73.2
Msa0192970 AT1G49360.2 32.110 218 117 11 20 214 8 217 2.20e-14 73.2
Msa0192970 AT1G49360.4 32.110 218 117 11 20 214 8 217 2.20e-14 73.2
Msa0192970 AT4G10695.2 24.790 238 157 8 32 254 4 234 3.56e-14 71.2
Msa0192970 AT4G10695.1 24.790 238 157 8 32 254 4 234 3.56e-14 71.2
Msa0192970 AT4G12370.1 45.455 88 43 3 75 160 18 102 3.86e-13 68.9
Msa0192970 AT4G00893.1 33.333 150 83 5 10 148 38 181 2.95e-11 63.9

Find 60 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGATCATCTCCTTAA+AGG 0.136143 2_1:+8783211 Msa0192970:CDS
GCACGATCCATACTCCTTTA+AGG 0.163291 2_1:-8783225 None:intergenic
ATAACTTGTTTCTCTTTAAA+AGG 0.181471 2_1:+8782879 Msa0192970:CDS
TATATTCATGGTGGTAAAAT+TGG 0.213686 2_1:-8782859 None:intergenic
ATGGAGCGAGTGTAGTTTAT+TGG 0.249967 2_1:+8782982 Msa0192970:CDS
ACTCTATGATGCTCAAAATT+TGG 0.258194 2_1:+8783156 Msa0192970:CDS
CAAGTTGACCCAGCCAGTTC+TGG 0.303744 2_1:-8782593 None:intergenic
GATTCTGTGATAGGACAATT+TGG 0.336565 2_1:-8782704 None:intergenic
ATCATCTCCTTAAAGGAGTA+TGG 0.340645 2_1:+8783218 Msa0192970:CDS
AGAGAAACAAGTTATATTCA+TGG 0.355620 2_1:-8782871 None:intergenic
TCTTAGTGTTTATGATATCT+TGG 0.361386 2_1:-8783247 None:intergenic
TGCTGTCAAATATTGCAAAT+AGG 0.363050 2_1:+8782417 Msa0192970:CDS
TAGAACTGCACACGCTTTAT+CGG 0.366007 2_1:+8782813 Msa0192970:CDS
GATTGGCGCTCTAAATTTAG+TGG 0.386788 2_1:+8782482 Msa0192970:CDS
TTCATCTGCTCCCACGTCTC+AGG 0.396997 2_1:+8782748 Msa0192970:CDS
CAGTCATTCGATTCTGTGAT+AGG 0.398376 2_1:-8782713 None:intergenic
AGAACTGCACACGCTTTATC+GGG 0.398949 2_1:+8782814 Msa0192970:CDS
ACTACACTCGCTCCATTGTT+TGG 0.401720 2_1:-8782975 None:intergenic
TTCATCATGTGTGCAAAGAT+TGG 0.403215 2_1:+8782465 Msa0192970:CDS
TATAACTACAAGTTTATTGC+TGG 0.411591 2_1:-8782936 None:intergenic
CACTATCGAAATTCCAGAAC+TGG 0.428141 2_1:+8782580 Msa0192970:CDS
TGGTGTGGGGTGATTACATT+TGG 0.434879 2_1:+8783176 Msa0192970:CDS
GATCCATGGTTTCTGTTGTA+TGG 0.439332 2_1:+8782509 Msa0192970:CDS
GTCAAATATTGCAAATAGGC+TGG 0.448250 2_1:+8782421 Msa0192970:CDS
AGGTGTGCATTCTTTATTGA+AGG 0.450535 2_1:+8782899 Msa0192970:CDS
CTGAAAGGAAAACTAGGACT+TGG 0.474308 2_1:+8783103 Msa0192970:CDS
GCCTTGCATCCTACGACGGA+TGG 0.482267 2_1:+8782615 Msa0192970:CDS
TTTATCATCCTTGTTTAGCA+TGG 0.488027 2_1:-8782552 None:intergenic
ATCGAAATTCCAGAACTGGC+TGG 0.492699 2_1:+8782584 Msa0192970:CDS
ATATTTGACAGCAGATCATA+AGG 0.498174 2_1:-8782407 None:intergenic
AGTATTGAAATGTAGATTGA+GGG 0.511372 2_1:+8783033 Msa0192970:CDS
GGTGTGCATTCTTTATTGAA+GGG 0.534190 2_1:+8782900 Msa0192970:CDS
CAGTATTGAAATGTAGATTG+AGG 0.535602 2_1:+8783032 Msa0192970:CDS
ATGTTGCAATAGATACTTGT+GGG 0.537656 2_1:+8783131 Msa0192970:CDS
AATTTAGTGGATGTGATCCA+TGG 0.540102 2_1:+8782495 Msa0192970:CDS
AAGGATCTGAAAGGAAAACT+AGG 0.543003 2_1:+8783097 Msa0192970:CDS
TCGAAATTCCAGAACTGGCT+GGG 0.550468 2_1:+8782585 Msa0192970:CDS
TTTATCGGGGAGATAATTCA+CGG 0.550801 2_1:+8782828 Msa0192970:CDS
GTGTGCATTCTTTATTGAAG+GGG 0.552789 2_1:+8782901 Msa0192970:CDS
GCCATCCGTCGTAGGATGCA+AGG 0.563825 2_1:-8782616 None:intergenic
TGATGCTCAAAATTTGGTGT+GGG 0.569401 2_1:+8783162 Msa0192970:CDS
TTTCTGTTGTATGGTGAAGA+AGG 0.575330 2_1:+8782518 Msa0192970:CDS
AAAGGGAAAGCATCGATCAA+AGG 0.578404 2_1:+8783078 Msa0192970:CDS
ATGATGCTCAAAATTTGGTG+TGG 0.583531 2_1:+8783161 Msa0192970:CDS
GAGAAGCAGCCATCCGTCGT+AGG 0.605702 2_1:-8782624 None:intergenic
ACAATGCAATCCTGAGACGT+GGG 0.606280 2_1:-8782758 None:intergenic
AACAATGCAATCCTGAGACG+TGG 0.609541 2_1:-8782759 None:intergenic
TCGTTGTTCCATGCTAAACA+AGG 0.611298 2_1:+8782544 Msa0192970:CDS
TTGAGTGGCGTGATTAATCA+CGG 0.617271 2_1:-8782783 None:intergenic
TCACCATACAACAGAAACCA+TGG 0.617900 2_1:-8782512 None:intergenic
CATCGATCAAAGGATCTGAA+AGG 0.623852 2_1:+8783088 Msa0192970:CDS
AAAAGAAAAGCAAAGGAGAG+TGG 0.624016 2_1:+8782375 Msa0192970:CDS
ACTTGCCTTGCATCCTACGA+CGG 0.635214 2_1:+8782611 Msa0192970:CDS
CAGTTCTAATATATATTGAG+TGG 0.641322 2_1:-8782798 None:intergenic
GAACTGCACACGCTTTATCG+GGG 0.662727 2_1:+8782815 Msa0192970:CDS
AATGTTGCAATAGATACTTG+TGG 0.675405 2_1:+8783130 Msa0192970:CDS
GAAACAAGTTATATTCATGG+TGG 0.683671 2_1:-8782868 None:intergenic
ACGTTGCTAATACCAAACAA+TGG 0.689270 2_1:+8782963 Msa0192970:CDS
GATGCTCAAAATTTGGTGTG+GGG 0.729523 2_1:+8783163 Msa0192970:CDS
TTGTTTAGCATGGAACAACG+AGG 0.763244 2_1:-8782542 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACTTGTTTCTCTTTAAA+AGG + chr2_1:8782879-8782898 Msa0192970:CDS 20.0%
!!! ATAACTTGTTTCTCTTTAAA+AGG + chr2_1:8782879-8782898 Msa0192970:CDS 20.0%
!!! TTTGCTTTTCTTTTTGCATA+TGG - chr2_1:8782369-8782388 None:intergenic 25.0%
! ATATGCAAAAAGAAAAGCAA+AGG + chr2_1:8782368-8782387 Msa0192970:CDS 25.0%
!!! TGTATTTTTTCTCTAGAGAA+GGG - chr2_1:8782680-8782699 None:intergenic 25.0%
!!! ATGTATTTTTTCTCTAGAGA+AGG - chr2_1:8782681-8782700 None:intergenic 25.0%
!! CAGTTCTAATATATATTGAG+TGG - chr2_1:8782801-8782820 None:intergenic 25.0%
! TATATTCATGGTGGTAAAAT+TGG - chr2_1:8782862-8782881 None:intergenic 25.0%
! AGAGAAACAAGTTATATTCA+TGG - chr2_1:8782874-8782893 None:intergenic 25.0%
! TATAACTACAAGTTTATTGC+TGG - chr2_1:8782939-8782958 None:intergenic 25.0%
!! AGTATTGAAATGTAGATTGA+GGG + chr2_1:8783033-8783052 Msa0192970:CDS 25.0%
! ATTGTCAAAGAAAGCAAAAA+AGG + chr2_1:8783060-8783079 Msa0192970:CDS 25.0%
! TTGTCAAAGAAAGCAAAAAA+GGG + chr2_1:8783061-8783080 Msa0192970:CDS 25.0%
!!! TTTGCTTTTCTTTTTGCATA+TGG - chr2_1:8782369-8782388 None:intergenic 25.0%
! ATATGCAAAAAGAAAAGCAA+AGG + chr2_1:8782368-8782387 Msa0192970:CDS 25.0%
!!! TGTATTTTTTCTCTAGAGAA+GGG - chr2_1:8782680-8782699 None:intergenic 25.0%
!!! ATGTATTTTTTCTCTAGAGA+AGG - chr2_1:8782681-8782700 None:intergenic 25.0%
!! CAGTTCTAATATATATTGAG+TGG - chr2_1:8782801-8782820 None:intergenic 25.0%
! TATATTCATGGTGGTAAAAT+TGG - chr2_1:8782862-8782881 None:intergenic 25.0%
! AGAGAAACAAGTTATATTCA+TGG - chr2_1:8782874-8782893 None:intergenic 25.0%
! TATAACTACAAGTTTATTGC+TGG - chr2_1:8782939-8782958 None:intergenic 25.0%
!! AGTATTGAAATGTAGATTGA+GGG + chr2_1:8783033-8783052 Msa0192970:CDS 25.0%
! ATTGTCAAAGAAAGCAAAAA+AGG + chr2_1:8783060-8783079 Msa0192970:CDS 25.0%
! TTGTCAAAGAAAGCAAAAAA+GGG + chr2_1:8783061-8783080 Msa0192970:CDS 25.0%
ATATTTGACAGCAGATCATA+AGG - chr2_1:8782410-8782429 None:intergenic 30.0%
TGCTGTCAAATATTGCAAAT+AGG + chr2_1:8782417-8782436 Msa0192970:CDS 30.0%
! TTTATCATCCTTGTTTAGCA+TGG - chr2_1:8782555-8782574 None:intergenic 30.0%
!!! GTATTTTTTCTCTAGAGAAG+GGG - chr2_1:8782679-8782698 None:intergenic 30.0%
GAAACAAGTTATATTCATGG+TGG - chr2_1:8782871-8782890 None:intergenic 30.0%
! CAGTATTGAAATGTAGATTG+AGG + chr2_1:8783032-8783051 Msa0192970:CDS 30.0%
AATGTTGCAATAGATACTTG+TGG + chr2_1:8783130-8783149 Msa0192970:CDS 30.0%
ATGTTGCAATAGATACTTGT+GGG + chr2_1:8783131-8783150 Msa0192970:CDS 30.0%
ACTCTATGATGCTCAAAATT+TGG + chr2_1:8783156-8783175 Msa0192970:CDS 30.0%
! TTTGATGATCATCTCCTTAA+AGG + chr2_1:8783211-8783230 Msa0192970:CDS 30.0%
ATATTTGACAGCAGATCATA+AGG - chr2_1:8782410-8782429 None:intergenic 30.0%
TGCTGTCAAATATTGCAAAT+AGG + chr2_1:8782417-8782436 Msa0192970:CDS 30.0%
! TTTATCATCCTTGTTTAGCA+TGG - chr2_1:8782555-8782574 None:intergenic 30.0%
!!! GTATTTTTTCTCTAGAGAAG+GGG - chr2_1:8782679-8782698 None:intergenic 30.0%
GAAACAAGTTATATTCATGG+TGG - chr2_1:8782871-8782890 None:intergenic 30.0%
! CAGTATTGAAATGTAGATTG+AGG + chr2_1:8783032-8783051 Msa0192970:CDS 30.0%
AATGTTGCAATAGATACTTG+TGG + chr2_1:8783130-8783149 Msa0192970:CDS 30.0%
ATGTTGCAATAGATACTTGT+GGG + chr2_1:8783131-8783150 Msa0192970:CDS 30.0%
ACTCTATGATGCTCAAAATT+TGG + chr2_1:8783156-8783175 Msa0192970:CDS 30.0%
! TTTGATGATCATCTCCTTAA+AGG + chr2_1:8783211-8783230 Msa0192970:CDS 30.0%
AAAAGAAAAGCAAAGGAGAG+TGG + chr2_1:8782375-8782394 Msa0192970:CDS 35.0%
GTCAAATATTGCAAATAGGC+TGG + chr2_1:8782421-8782440 Msa0192970:CDS 35.0%
TTCATCATGTGTGCAAAGAT+TGG + chr2_1:8782465-8782484 Msa0192970:CDS 35.0%
! AATTTAGTGGATGTGATCCA+TGG + chr2_1:8782495-8782514 Msa0192970:CDS 35.0%
TTTCTGTTGTATGGTGAAGA+AGG + chr2_1:8782518-8782537 Msa0192970:CDS 35.0%
GATTCTGTGATAGGACAATT+TGG - chr2_1:8782707-8782726 None:intergenic 35.0%
TTTATCGGGGAGATAATTCA+CGG + chr2_1:8782828-8782847 Msa0192970:CDS 35.0%
AGGTGTGCATTCTTTATTGA+AGG + chr2_1:8782899-8782918 Msa0192970:CDS 35.0%
GGTGTGCATTCTTTATTGAA+GGG + chr2_1:8782900-8782919 Msa0192970:CDS 35.0%
GTGTGCATTCTTTATTGAAG+GGG + chr2_1:8782901-8782920 Msa0192970:CDS 35.0%
ACGTTGCTAATACCAAACAA+TGG + chr2_1:8782963-8782982 Msa0192970:CDS 35.0%
AAGGATCTGAAAGGAAAACT+AGG + chr2_1:8783097-8783116 Msa0192970:CDS 35.0%
! ATGATGCTCAAAATTTGGTG+TGG + chr2_1:8783161-8783180 Msa0192970:CDS 35.0%
!! TGATGCTCAAAATTTGGTGT+GGG + chr2_1:8783162-8783181 Msa0192970:CDS 35.0%
ATCATCTCCTTAAAGGAGTA+TGG + chr2_1:8783218-8783237 Msa0192970:CDS 35.0%
AAAAGAAAAGCAAAGGAGAG+TGG + chr2_1:8782375-8782394 Msa0192970:CDS 35.0%
GTCAAATATTGCAAATAGGC+TGG + chr2_1:8782421-8782440 Msa0192970:CDS 35.0%
TTCATCATGTGTGCAAAGAT+TGG + chr2_1:8782465-8782484 Msa0192970:CDS 35.0%
! AATTTAGTGGATGTGATCCA+TGG + chr2_1:8782495-8782514 Msa0192970:CDS 35.0%
TTTCTGTTGTATGGTGAAGA+AGG + chr2_1:8782518-8782537 Msa0192970:CDS 35.0%
GATTCTGTGATAGGACAATT+TGG - chr2_1:8782707-8782726 None:intergenic 35.0%
TTTATCGGGGAGATAATTCA+CGG + chr2_1:8782828-8782847 Msa0192970:CDS 35.0%
AGGTGTGCATTCTTTATTGA+AGG + chr2_1:8782899-8782918 Msa0192970:CDS 35.0%
GGTGTGCATTCTTTATTGAA+GGG + chr2_1:8782900-8782919 Msa0192970:CDS 35.0%
GTGTGCATTCTTTATTGAAG+GGG + chr2_1:8782901-8782920 Msa0192970:CDS 35.0%
ACGTTGCTAATACCAAACAA+TGG + chr2_1:8782963-8782982 Msa0192970:CDS 35.0%
AAGGATCTGAAAGGAAAACT+AGG + chr2_1:8783097-8783116 Msa0192970:CDS 35.0%
! ATGATGCTCAAAATTTGGTG+TGG + chr2_1:8783161-8783180 Msa0192970:CDS 35.0%
!! TGATGCTCAAAATTTGGTGT+GGG + chr2_1:8783162-8783181 Msa0192970:CDS 35.0%
ATCATCTCCTTAAAGGAGTA+TGG + chr2_1:8783218-8783237 Msa0192970:CDS 35.0%
! GATTGGCGCTCTAAATTTAG+TGG + chr2_1:8782482-8782501 Msa0192970:CDS 40.0%
GATCCATGGTTTCTGTTGTA+TGG + chr2_1:8782509-8782528 Msa0192970:CDS 40.0%
TCACCATACAACAGAAACCA+TGG - chr2_1:8782515-8782534 None:intergenic 40.0%
TTGTTTAGCATGGAACAACG+AGG - chr2_1:8782545-8782564 None:intergenic 40.0%
TCGTTGTTCCATGCTAAACA+AGG + chr2_1:8782544-8782563 Msa0192970:CDS 40.0%
CACTATCGAAATTCCAGAAC+TGG + chr2_1:8782580-8782599 Msa0192970:CDS 40.0%
CAGTCATTCGATTCTGTGAT+AGG - chr2_1:8782716-8782735 None:intergenic 40.0%
TTGAGTGGCGTGATTAATCA+CGG - chr2_1:8782786-8782805 None:intergenic 40.0%
TAGAACTGCACACGCTTTAT+CGG + chr2_1:8782813-8782832 Msa0192970:CDS 40.0%
ATGGAGCGAGTGTAGTTTAT+TGG + chr2_1:8782982-8783001 Msa0192970:CDS 40.0%
!! AAAGGGAAAGCATCGATCAA+AGG + chr2_1:8783078-8783097 Msa0192970:CDS 40.0%
CATCGATCAAAGGATCTGAA+AGG + chr2_1:8783088-8783107 Msa0192970:CDS 40.0%
CTGAAAGGAAAACTAGGACT+TGG + chr2_1:8783103-8783122 Msa0192970:CDS 40.0%
!! GATGCTCAAAATTTGGTGTG+GGG + chr2_1:8783163-8783182 Msa0192970:CDS 40.0%
! GATTGGCGCTCTAAATTTAG+TGG + chr2_1:8782482-8782501 Msa0192970:CDS 40.0%
GATCCATGGTTTCTGTTGTA+TGG + chr2_1:8782509-8782528 Msa0192970:CDS 40.0%
TCACCATACAACAGAAACCA+TGG - chr2_1:8782515-8782534 None:intergenic 40.0%
TTGTTTAGCATGGAACAACG+AGG - chr2_1:8782545-8782564 None:intergenic 40.0%
TCGTTGTTCCATGCTAAACA+AGG + chr2_1:8782544-8782563 Msa0192970:CDS 40.0%
CACTATCGAAATTCCAGAAC+TGG + chr2_1:8782580-8782599 Msa0192970:CDS 40.0%
CAGTCATTCGATTCTGTGAT+AGG - chr2_1:8782716-8782735 None:intergenic 40.0%
TTGAGTGGCGTGATTAATCA+CGG - chr2_1:8782786-8782805 None:intergenic 40.0%
TAGAACTGCACACGCTTTAT+CGG + chr2_1:8782813-8782832 Msa0192970:CDS 40.0%
ATGGAGCGAGTGTAGTTTAT+TGG + chr2_1:8782982-8783001 Msa0192970:CDS 40.0%
!! AAAGGGAAAGCATCGATCAA+AGG + chr2_1:8783078-8783097 Msa0192970:CDS 40.0%
CATCGATCAAAGGATCTGAA+AGG + chr2_1:8783088-8783107 Msa0192970:CDS 40.0%
CTGAAAGGAAAACTAGGACT+TGG + chr2_1:8783103-8783122 Msa0192970:CDS 40.0%
!! GATGCTCAAAATTTGGTGTG+GGG + chr2_1:8783163-8783182 Msa0192970:CDS 40.0%
ATCGAAATTCCAGAACTGGC+TGG + chr2_1:8782584-8782603 Msa0192970:CDS 45.0%
TCGAAATTCCAGAACTGGCT+GGG + chr2_1:8782585-8782604 Msa0192970:CDS 45.0%
ACAATGCAATCCTGAGACGT+GGG - chr2_1:8782761-8782780 None:intergenic 45.0%
AACAATGCAATCCTGAGACG+TGG - chr2_1:8782762-8782781 None:intergenic 45.0%
AGAACTGCACACGCTTTATC+GGG + chr2_1:8782814-8782833 Msa0192970:CDS 45.0%
ACTACACTCGCTCCATTGTT+TGG - chr2_1:8782978-8782997 None:intergenic 45.0%
TGGTGTGGGGTGATTACATT+TGG + chr2_1:8783176-8783195 Msa0192970:CDS 45.0%
GCACGATCCATACTCCTTTA+AGG - chr2_1:8783228-8783247 None:intergenic 45.0%
ATCGAAATTCCAGAACTGGC+TGG + chr2_1:8782584-8782603 Msa0192970:CDS 45.0%
TCGAAATTCCAGAACTGGCT+GGG + chr2_1:8782585-8782604 Msa0192970:CDS 45.0%
ACAATGCAATCCTGAGACGT+GGG - chr2_1:8782761-8782780 None:intergenic 45.0%
AACAATGCAATCCTGAGACG+TGG - chr2_1:8782762-8782781 None:intergenic 45.0%
AGAACTGCACACGCTTTATC+GGG + chr2_1:8782814-8782833 Msa0192970:CDS 45.0%
ACTACACTCGCTCCATTGTT+TGG - chr2_1:8782978-8782997 None:intergenic 45.0%
TGGTGTGGGGTGATTACATT+TGG + chr2_1:8783176-8783195 Msa0192970:CDS 45.0%
GCACGATCCATACTCCTTTA+AGG - chr2_1:8783228-8783247 None:intergenic 45.0%
ACTTGCCTTGCATCCTACGA+CGG + chr2_1:8782611-8782630 Msa0192970:CDS 50.0%
GAACTGCACACGCTTTATCG+GGG + chr2_1:8782815-8782834 Msa0192970:CDS 50.0%
ACTTGCCTTGCATCCTACGA+CGG + chr2_1:8782611-8782630 Msa0192970:CDS 50.0%
GAACTGCACACGCTTTATCG+GGG + chr2_1:8782815-8782834 Msa0192970:CDS 50.0%
! CAAGTTGACCCAGCCAGTTC+TGG - chr2_1:8782596-8782615 None:intergenic 55.0%
TTCATCTGCTCCCACGTCTC+AGG + chr2_1:8782748-8782767 Msa0192970:CDS 55.0%
! CAAGTTGACCCAGCCAGTTC+TGG - chr2_1:8782596-8782615 None:intergenic 55.0%
TTCATCTGCTCCCACGTCTC+AGG + chr2_1:8782748-8782767 Msa0192970:CDS 55.0%
GCCTTGCATCCTACGACGGA+TGG + chr2_1:8782615-8782634 Msa0192970:CDS 60.0%
GCCATCCGTCGTAGGATGCA+AGG - chr2_1:8782619-8782638 None:intergenic 60.0%
GAGAAGCAGCCATCCGTCGT+AGG - chr2_1:8782627-8782646 None:intergenic 60.0%
GCCTTGCATCCTACGACGGA+TGG + chr2_1:8782615-8782634 Msa0192970:CDS 60.0%
GCCATCCGTCGTAGGATGCA+AGG - chr2_1:8782619-8782638 None:intergenic 60.0%
GAGAAGCAGCCATCCGTCGT+AGG - chr2_1:8782627-8782646 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 8782347 8783267 8782347 ID=Msa0192970;Name=Msa0192970
chr2_1 mRNA 8782347 8783267 8782347 ID=Msa0192970-mRNA-1;Parent=Msa0192970;Name=Msa0192970-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|306
chr2_1 exon 8782347 8783267 8782347 ID=Msa0192970-mRNA-1:exon:4042;Parent=Msa0192970-mRNA-1
chr2_1 CDS 8782347 8783267 8782347 ID=Msa0192970-mRNA-1:cds;Parent=Msa0192970-mRNA-1
Gene Sequence

>Msa0192970

ATGTCGGAAGCTGATTCTGCCATATGCAAAAAGAAAAGCAAAGGAGAGTGGTCAAGTATACCTTATGATCTGCTGTCAAATATTGCAAATAGGCTGGAACTAATTGATTTTACAAGTTTTCATCATGTGTGCAAAGATTGGCGCTCTAAATTTAGTGGATGTGATCCATGGTTTCTGTTGTATGGTGAAGAAGGTCCTCGTTGTTCCATGCTAAACAAGGATGATAAAGTATACACTATCGAAATTCCAGAACTGGCTGGGTCAACTTGCCTTGCATCCTACGACGGATGGCTGCTTCTCTTTCACGATGATTCATTGTTTTTCTTTTGCCCCTTCTCTAGAGAAAAAATACATCTTCCAAATTGTCCTATCACAGAATCGAATGACTGTGTTGCAGCATTTTCATCTGCTCCCACGTCTCAGGATTGCATTGTTGCCGTGATTAATCACGCCACTCAATATATATTAGAACTGCACACGCTTTATCGGGGAGATAATTCACGGTTTAAACACCAATTTTACCACCATGAATATAACTTGTTTCTCTTTAAAAGGTGTGCATTCTTTATTGAAGGGGAATTCATCTATGCCAGCAATAAACTTGTAGTTATATTCGACGTTGCTAATACCAAACAATGGAGCGAGTGTAGTTTATTGGATATAAAATATCAACGTAATGATGAATCAGTATTGAAATGTAGATTGAGGGATATATTGTCAAAGAAAGCAAAAAAGGGAAAGCATCGATCAAAGGATCTGAAAGGAAAACTAGGACTTGGCGACAATGTTGCAATAGATACTTGTGGGACACTCTATGATGCTCAAAATTTGGTGTGGGGTGATTACATTTGGTCTGTTGCATTATTTGATGATCATCTCCTTAAAGGAGTATGGATCGTGCCAAGATATCATAAACACTAA

Protein sequence

>Msa0192970

MSEADSAICKKKSKGEWSSIPYDLLSNIANRLELIDFTSFHHVCKDWRSKFSGCDPWFLLYGEEGPRCSMLNKDDKVYTIEIPELAGSTCLASYDGWLLLFHDDSLFFFCPFSREKIHLPNCPITESNDCVAAFSSAPTSQDCIVAVINHATQYILELHTLYRGDNSRFKHQFYHHEYNLFLFKRCAFFIEGEFIYASNKLVVIFDVANTKQWSECSLLDIKYQRNDESVLKCRLRDILSKKAKKGKHRSKDLKGKLGLGDNVAIDTCGTLYDAQNLVWGDYIWSVALFDDHLLKGVWIVPRYHKH*