Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564890 | AET03044.2 | 85.140 | 572 | 81 | 2 | 1 | 568 | 1 | 572 | 0.0 | 977 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564890 | sp|Q65XV7|RFA1C_ORYSJ | 25.117 | 426 | 261 | 17 | 8 | 397 | 310 | 713 | 1.27e-22 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564890 | G7LDT6 | 85.140 | 572 | 81 | 2 | 1 | 568 | 1 | 572 | 0.0 | 977 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0564890 | 0.801105 | 1.053533e-48 | -8.615850e-47 |
| Msa0013750 | Msa0564890 | 0.835808 | 1.352711e-56 | -8.615850e-47 |
| Msa0015750 | Msa0564890 | 0.844566 | 6.982173e-59 | -8.615850e-47 |
| Msa0016570 | Msa0564890 | 0.863362 | 2.627220e-64 | -8.615850e-47 |
| Msa0016580 | Msa0564890 | 0.834184 | 3.471359e-56 | -8.615850e-47 |
| Msa0028480 | Msa0564890 | 0.817821 | 2.702903e-52 | -8.615850e-47 |
| Msa0092630 | Msa0564890 | 0.824622 | 7.306696e-54 | -8.615850e-47 |
| Msa0102070 | Msa0564890 | 0.895136 | 1.276629e-75 | -8.615850e-47 |
| Msa0107580 | Msa0564890 | 0.803494 | 3.394063e-49 | -8.615850e-47 |
| Msa0110270 | Msa0564890 | 0.827325 | 1.665013e-54 | -8.615850e-47 |
| Msa0111510 | Msa0564890 | 0.859650 | 3.572069e-63 | -8.615850e-47 |
| Msa0123810 | Msa0564890 | 0.828214 | 1.018195e-54 | -8.615850e-47 |
| Msa0124100 | Msa0564890 | 0.833945 | 3.984281e-56 | -8.615850e-47 |
| Msa0124150 | Msa0564890 | 0.818002 | 2.460011e-52 | -8.615850e-47 |
| Msa0142220 | Msa0564890 | 0.843748 | 1.157681e-58 | -8.615850e-47 |
| Msa0145750 | Msa0564890 | 0.879647 | 1.050339e-69 | -8.615850e-47 |
| Msa0153910 | Msa0564890 | 0.865125 | 7.407147e-65 | -8.615850e-47 |
| Msa0192970 | Msa0564890 | 0.826491 | 2.634786e-54 | -8.615850e-47 |
| Msa0197010 | Msa0564890 | 0.822302 | 2.548090e-53 | -8.615850e-47 |
| Msa0200000 | Msa0564890 | 0.845700 | 3.449256e-59 | -8.615850e-47 |
| Msa0200940 | Msa0564890 | 0.800398 | 1.468199e-48 | -8.615850e-47 |
| Msa0227480 | Msa0564890 | 0.873164 | 1.818202e-67 | -8.615850e-47 |
| Msa0231000 | Msa0564890 | 0.829421 | 5.195662e-55 | -8.615850e-47 |
| Msa0232850 | Msa0564890 | 0.840498 | 8.385465e-58 | -8.615850e-47 |
| Msa0235140 | Msa0564890 | 0.870341 | 1.570630e-66 | -8.615850e-47 |
| Msa0365500 | Msa0564890 | 0.865340 | 6.340516e-65 | -8.615850e-47 |
| Msa0366420 | Msa0564890 | 0.818507 | 1.891238e-52 | -8.615850e-47 |
| Msa0366430 | Msa0564890 | 0.819519 | 1.113114e-52 | -8.615850e-47 |
| Msa0366580 | Msa0564890 | 0.816294 | 5.957025e-52 | -8.615850e-47 |
| Msa0369730 | Msa0564890 | 0.806192 | 9.268361e-50 | -8.615850e-47 |
| Msa0384800 | Msa0564890 | 0.884327 | 2.108930e-71 | -8.615850e-47 |
| Msa0390070 | Msa0564890 | 0.800354 | 1.498800e-48 | -8.615850e-47 |
| Msa0394970 | Msa0564890 | 0.824297 | 8.714227e-54 | -8.615850e-47 |
| Msa0406120 | Msa0564890 | 0.857484 | 1.582363e-62 | -8.615850e-47 |
| Msa0406280 | Msa0564890 | 0.802969 | 4.359139e-49 | -8.615850e-47 |
| Msa0407750 | Msa0564890 | 0.820066 | 8.345071e-53 | -8.615850e-47 |
| Msa0414410 | Msa0564890 | 0.904419 | 1.251926e-79 | -8.615850e-47 |
| Msa0414420 | Msa0564890 | 0.946789 | 2.358449e-105 | -8.615850e-47 |
| Msa0436780 | Msa0564890 | 0.857765 | 1.305822e-62 | -8.615850e-47 |
| Msa0436800 | Msa0564890 | 0.844722 | 6.337911e-59 | -8.615850e-47 |
| Msa0438620 | Msa0564890 | 0.863311 | 2.724473e-64 | -8.615850e-47 |
| Msa0444130 | Msa0564890 | 0.800968 | 1.123488e-48 | -8.615850e-47 |
| Msa0450000 | Msa0564890 | 0.869307 | 3.415067e-66 | -8.615850e-47 |
| Msa0450570 | Msa0564890 | 0.837214 | 5.930156e-57 | -8.615850e-47 |
| Msa0451730 | Msa0564890 | 0.842324 | 2.772689e-58 | -8.615850e-47 |
| Msa0452900 | Msa0564890 | 0.927830 | 6.798636e-92 | -8.615850e-47 |
| Msa0452910 | Msa0564890 | 0.804627 | 1.972535e-49 | -8.615850e-47 |
| Msa0453120 | Msa0564890 | 0.862096 | 6.456449e-64 | -8.615850e-47 |
| Msa0454370 | Msa0564890 | 0.844604 | 6.823108e-59 | -8.615850e-47 |
| Msa0454910 | Msa0564890 | 0.869789 | 2.379762e-66 | -8.615850e-47 |
| Msa0459160 | Msa0564890 | 0.884088 | 2.584207e-71 | -8.615850e-47 |
| Msa0459170 | Msa0564890 | 0.879415 | 1.269661e-69 | -8.615850e-47 |
| Msa0482620 | Msa0564890 | 0.810024 | 1.415500e-50 | -8.615850e-47 |
| Msa0247260 | Msa0564890 | 0.803922 | 2.765526e-49 | -8.615850e-47 |
| Msa0256440 | Msa0564890 | 0.807167 | 5.770689e-50 | -8.615850e-47 |
| Msa0267000 | Msa0564890 | 0.906174 | 1.966913e-80 | -8.615850e-47 |
| Msa0267010 | Msa0564890 | 0.909665 | 4.432355e-82 | -8.615850e-47 |
| Msa0270520 | Msa0564890 | 0.844559 | 7.011869e-59 | -8.615850e-47 |
| Msa0282310 | Msa0564890 | 0.822485 | 2.310079e-53 | -8.615850e-47 |
| Msa0285810 | Msa0564890 | 0.808277 | 3.352202e-50 | -8.615850e-47 |
| Msa0304170 | Msa0564890 | 0.842617 | 2.317293e-58 | -8.615850e-47 |
| Msa0306460 | Msa0564890 | 0.836284 | 1.024038e-56 | -8.615850e-47 |
| Msa0313760 | Msa0564890 | 0.878201 | 3.402402e-69 | -8.615850e-47 |
| Msa0342240 | Msa0564890 | 0.901386 | 2.825384e-78 | -8.615850e-47 |
| Msa0360510 | Msa0564890 | 0.899330 | 2.204580e-77 | -8.615850e-47 |
| Msa0362420 | Msa0564890 | 0.808738 | 2.672908e-50 | -8.615850e-47 |
| Msa0363300 | Msa0564890 | 0.821543 | 3.818869e-53 | -8.615850e-47 |
| Msa0485030 | Msa0564890 | 0.840715 | 7.356527e-58 | -8.615850e-47 |
| Msa0491590 | Msa0564890 | 0.863672 | 2.106106e-64 | -8.615850e-47 |
| Msa0502760 | Msa0564890 | 0.848964 | 4.381286e-60 | -8.615850e-47 |
| Msa0505080 | Msa0564890 | 0.807343 | 5.294200e-50 | -8.615850e-47 |
| Msa0506190 | Msa0564890 | 0.831869 | 1.307209e-55 | -8.615850e-47 |
| Msa0506270 | Msa0564890 | 0.832480 | 9.227052e-56 | -8.615850e-47 |
| Msa0534540 | Msa0564890 | 0.836639 | 8.315698e-57 | -8.615850e-47 |
| Msa0564890 | Msa0589780 | 0.826205 | 3.082497e-54 | -8.615850e-47 |
| Msa0564890 | Msa0596150 | 0.842773 | 2.106385e-58 | -8.615850e-47 |
| Msa0564890 | Msa0598780 | 0.810529 | 1.101614e-50 | -8.615850e-47 |
| Msa0564890 | Msa0604350 | 0.827582 | 1.444461e-54 | -8.615850e-47 |
| Msa0564890 | Msa0636170 | 0.841666 | 4.138036e-58 | -8.615850e-47 |
| Msa0564890 | Msa0639610 | 0.844488 | 7.329369e-59 | -8.615850e-47 |
| Msa0564890 | Msa0668260 | 0.831882 | 1.297706e-55 | -8.615850e-47 |
| Msa0564890 | Msa0678930 | 0.870629 | 1.262895e-66 | -8.615850e-47 |
| Msa0564890 | Msa0694370 | 0.833344 | 5.630016e-56 | -8.615850e-47 |
| Msa0564890 | Msa0703120 | 0.811798 | 5.846162e-51 | -8.615850e-47 |
| Msa0564890 | Msa0725850 | 0.820694 | 5.989707e-53 | -8.615850e-47 |
| Msa0564890 | Msa0726140 | 0.906931 | 8.745161e-81 | -8.615850e-47 |
| Msa0564890 | Msa0729800 | 0.860223 | 2.398972e-63 | -8.615850e-47 |
| Msa0564890 | Msa0732310 | 0.835066 | 2.083286e-56 | -8.615850e-47 |
| Msa0564890 | Msa0732710 | 0.800307 | 1.532326e-48 | -8.615850e-47 |
| Msa0564890 | Msa0733290 | 0.874424 | 6.825851e-68 | -8.615850e-47 |
| Msa0564890 | Msa0735080 | 0.823098 | 1.663360e-53 | -8.615850e-47 |
| Msa0564890 | Msa0741990 | 0.840847 | 6.794253e-58 | -8.615850e-47 |
| Msa0564890 | Msa0743810 | 0.906394 | 1.554638e-80 | -8.615850e-47 |
| Msa0564890 | Msa0745060 | 0.912465 | 1.888611e-83 | -8.615850e-47 |
| Msa0564890 | Msa0766630 | 0.813695 | 2.246642e-51 | -8.615850e-47 |
| Msa0564890 | Msa0767720 | 0.863419 | 2.523048e-64 | -8.615850e-47 |
| Msa0564890 | Msa0777870 | 0.830114 | 3.523603e-55 | -8.615850e-47 |
| Msa0564890 | Msa0783160 | 0.911030 | 9.635812e-83 | -8.615850e-47 |
| Msa0564890 | Msa0784290 | 0.812998 | 3.197043e-51 | -8.615850e-47 |
| Msa0564890 | Msa0787600 | 0.897356 | 1.522901e-76 | -8.615850e-47 |
| Msa0564890 | Msa0808010 | 0.874585 | 6.019915e-68 | -8.615850e-47 |
| Msa0564890 | Msa0808020 | 0.865711 | 4.841989e-65 | -8.615850e-47 |
| Msa0564890 | Msa0811080 | 0.833100 | 6.474810e-56 | -8.615850e-47 |
| Msa0564890 | Msa0811270 | 0.820538 | 6.504385e-53 | -8.615850e-47 |
| Msa0564890 | Msa0824600 | 0.825645 | 4.187274e-54 | -8.615850e-47 |
| Msa0564890 | Msa0825860 | 0.920142 | 1.860856e-87 | -8.615850e-47 |
| Msa0564890 | Msa0833290 | 0.859866 | 3.075363e-63 | -8.615850e-47 |
| Msa0564890 | Msa0833300 | 0.829780 | 4.250793e-55 | -8.615850e-47 |
| Msa0564890 | Msa0845930 | 0.809515 | 1.821311e-50 | -8.615850e-47 |
| Msa0564890 | Msa0846210 | 0.833831 | 4.254693e-56 | -8.615850e-47 |
| Msa0564890 | Msa0846330 | 0.873723 | 1.178703e-67 | -8.615850e-47 |
| Msa0564890 | Msa0846350 | 0.888163 | 7.534191e-73 | -8.615850e-47 |
| Msa0564890 | Msa0848960 | 0.840383 | 8.990363e-58 | -8.615850e-47 |
| Msa0564890 | Msa0854980 | 0.813781 | 2.151635e-51 | -8.615850e-47 |
| Msa0564890 | Msa0858980 | 0.860079 | 2.651781e-63 | -8.615850e-47 |
| Msa0564890 | Msa0865320 | 0.898924 | 3.291619e-77 | -8.615850e-47 |
| Msa0564890 | Msa0866810 | 0.800530 | 1.380487e-48 | -8.615850e-47 |
| Msa0564890 | Msa0872230 | 0.848708 | 5.158992e-60 | -8.615850e-47 |
| Msa0564890 | Msa0873460 | 0.818283 | 2.125391e-52 | -8.615850e-47 |
| Msa0564890 | Msa0884150 | 0.801370 | 9.298230e-49 | -8.615850e-47 |
| Msa0564890 | Msa0885280 | 0.822704 | 2.054159e-53 | -8.615850e-47 |
| Msa0564890 | Msa0885290 | 0.871984 | 4.504317e-67 | -8.615850e-47 |
| Msa0564890 | Msa0887920 | 0.838830 | 2.277161e-57 | -8.615850e-47 |
| Msa0564890 | Msa0888370 | 0.852643 | 4.035702e-61 | -8.615850e-47 |
| Msa0564890 | Msa0888420 | 0.847496 | 1.115001e-59 | -8.615850e-47 |
| Msa0564890 | Msa0895270 | 0.816141 | 6.442952e-52 | -8.615850e-47 |
| Msa0564890 | Msa0896080 | 0.857095 | 2.061218e-62 | -8.615850e-47 |
| Msa0564890 | Msa0899430 | 0.800767 | 1.234968e-48 | -8.615850e-47 |
| Msa0564890 | Msa0907260 | 0.844056 | 9.572586e-59 | -8.615850e-47 |
| Msa0564890 | Msa0914760 | 0.818962 | 1.490257e-52 | -8.615850e-47 |
| Msa0564890 | Msa0916680 | 0.801953 | 7.060446e-49 | -8.615850e-47 |
| Msa0564890 | Msa0922150 | 0.811833 | 5.744138e-51 | -8.615850e-47 |
| Msa0564890 | Msa0952350 | 0.823808 | 1.134773e-53 | -8.615850e-47 |
| Msa0564890 | Msa0952720 | 0.836575 | 8.635801e-57 | -8.615850e-47 |
| Msa0564890 | Msa0954910 | 0.820481 | 6.706440e-53 | -8.615850e-47 |
| Msa0564890 | Msa0956270 | 0.839631 | 1.411305e-57 | -8.615850e-47 |
| Msa0564890 | Msa0957680 | 0.835703 | 1.437915e-56 | -8.615850e-47 |
| Msa0564890 | Msa0966760 | 0.810308 | 1.229757e-50 | -8.615850e-47 |
| Msa0564890 | Msa0969260 | 0.807429 | 5.077908e-50 | -8.615850e-47 |
| Msa0564890 | Msa0974870 | 0.805519 | 1.283837e-49 | -8.615850e-47 |
| Msa0564890 | Msa0979850 | 0.835833 | 1.333079e-56 | -8.615850e-47 |
| Msa0564890 | Msa0981270 | 0.827697 | 1.355522e-54 | -8.615850e-47 |
| Msa0564890 | Msa0981370 | 0.882770 | 7.884410e-71 | -8.615850e-47 |
| Msa0564890 | Msa0986400 | 0.816751 | 4.705468e-52 | -8.615850e-47 |
| Msa0564890 | Msa0989060 | 0.863577 | 2.253865e-64 | -8.615850e-47 |
| Msa0564890 | Msa0995760 | 0.819799 | 9.607587e-53 | -8.615850e-47 |
| Msa0564890 | Msa1016280 | 0.914043 | 3.042147e-84 | -8.615850e-47 |
| Msa0564890 | Msa1023050 | 0.813862 | 2.064565e-51 | -8.615850e-47 |
| Msa0564890 | Msa1024240 | 0.845133 | 4.910746e-59 | -8.615850e-47 |
| Msa0564890 | Msa1025360 | 0.920200 | 1.728277e-87 | -8.615850e-47 |
| Msa0564890 | Msa1025370 | 0.904836 | 8.093695e-80 | -8.615850e-47 |
| Msa0564890 | Msa1028230 | 0.806067 | 9.845514e-50 | -8.615850e-47 |
| Msa0564890 | Msa1044830 | 0.912484 | 1.847675e-83 | -8.615850e-47 |
| Msa0564890 | Msa1044840 | 0.920480 | 1.213662e-87 | -8.615850e-47 |
| Msa0564890 | Msa1060840 | 0.868882 | 4.690930e-66 | -8.615850e-47 |
| Msa0564890 | Msa1077460 | 0.826386 | 2.791792e-54 | -8.615850e-47 |
| Msa0564890 | Msa1092990 | 0.872606 | 2.795727e-67 | -8.615850e-47 |
| Msa0564890 | Msa1096580 | 0.816988 | 4.163151e-52 | -8.615850e-47 |
| Msa0564890 | Msa1100980 | 0.893828 | 4.368722e-75 | -8.615850e-47 |
| Msa0564890 | Msa1109440 | 0.914107 | 2.824603e-84 | -8.615850e-47 |
| Msa0564890 | Msa1112300 | 0.816449 | 5.499626e-52 | -8.615850e-47 |
| Msa0564890 | Msa1117150 | 0.806720 | 7.170753e-50 | -8.615850e-47 |
| Msa0564890 | Msa1121200 | 0.881620 | 2.063161e-70 | -8.615850e-47 |
| Msa0564890 | Msa1121480 | 0.810323 | 1.220231e-50 | -8.615850e-47 |
| Msa0564890 | Msa1123420 | 0.808397 | 3.160606e-50 | -8.615850e-47 |
| Msa0564890 | Msa1135220 | 0.809240 | 2.086276e-50 | -8.615850e-47 |
| Msa0564890 | Msa1135740 | 0.874576 | 6.065175e-68 | -8.615850e-47 |
| Msa0564890 | Msa1136090 | 0.857910 | 1.182707e-62 | -8.615850e-47 |
| Msa0564890 | Msa1146110 | 0.875472 | 2.999101e-68 | -8.615850e-47 |
| Msa0564890 | Msa1149360 | 0.879235 | 1.470380e-69 | -8.615850e-47 |
| Msa0564890 | Msa1150370 | 0.889048 | 3.430684e-73 | -8.615850e-47 |
| Msa0564890 | Msa1150640 | 0.800744 | 1.248398e-48 | -8.615850e-47 |
| Msa0564890 | Msa1160670 | 0.830955 | 2.193760e-55 | -8.615850e-47 |
| Msa0564890 | Msa1164120 | 0.813074 | 3.076423e-51 | -8.615850e-47 |
| Msa0564890 | Msa1173920 | 0.841082 | 5.896542e-58 | -8.615850e-47 |
| Msa0564890 | Msa1182090 | 0.818570 | 1.829161e-52 | -8.615850e-47 |
| Msa0564890 | Msa1184420 | 0.810771 | 9.767041e-51 | -8.615850e-47 |
| Msa0564890 | Msa1187940 | 0.875003 | 4.338093e-68 | -8.615850e-47 |
| Msa0564890 | Msa1187950 | 0.862255 | 5.769414e-64 | -8.615850e-47 |
| Msa0564890 | Msa1192640 | 0.920979 | 6.438701e-88 | -8.615850e-47 |
| Msa0564890 | Msa1193730 | 0.814775 | 1.297281e-51 | -8.615850e-47 |
| Msa0564890 | Msa1230430 | 0.831392 | 1.712921e-55 | -8.615850e-47 |
| Msa0564890 | Msa1246880 | 0.846453 | 2.151718e-59 | -8.615850e-47 |
| Msa0564890 | Msa1248310 | 0.817504 | 3.186517e-52 | -8.615850e-47 |
| Msa0564890 | Msa1260100 | 0.831823 | 1.341411e-55 | -8.615850e-47 |
| Msa0564890 | Msa1269670 | 0.910186 | 2.483506e-82 | -8.615850e-47 |
| Msa0564890 | Msa1270230 | 0.899256 | 2.371515e-77 | -8.615850e-47 |
| Msa0564890 | Msa1270240 | 0.881090 | 3.204789e-70 | -8.615850e-47 |
| Msa0564890 | Msa1270270 | 0.875145 | 3.879940e-68 | -8.615850e-47 |
| Msa0564890 | Msa1273230 | 0.832711 | 8.090505e-56 | -8.615850e-47 |
| Msa0564890 | Msa1283330 | 0.895990 | 5.662319e-76 | -8.615850e-47 |
| Msa0564890 | Msa1285930 | 0.928082 | 4.771107e-92 | -8.615850e-47 |
| Msa0564890 | Msa1287800 | 0.926638 | 3.559486e-91 | -8.615850e-47 |
| Msa0564890 | Msa1287810 | 0.934820 | 2.232172e-96 | -8.615850e-47 |
| Msa0564890 | Msa1287820 | 0.865853 | 4.367941e-65 | -8.615850e-47 |
| Msa0564890 | Msa1287830 | 0.871242 | 7.931554e-67 | -8.615850e-47 |
| Msa0564890 | Msa1288560 | 0.810097 | 1.365258e-50 | -8.615850e-47 |
| Msa0564890 | Msa1289420 | 0.820524 | 6.554189e-53 | -8.615850e-47 |
| Msa0564890 | Msa1289430 | 0.862673 | 4.291554e-64 | -8.615850e-47 |
| Msa0564890 | Msa1297210 | 0.859589 | 3.726445e-63 | -8.615850e-47 |
| Msa0564890 | Msa1305480 | 0.853943 | 1.710666e-61 | -8.615850e-47 |
| Msa0564890 | Msa1307890 | 0.882341 | 1.129768e-70 | -8.615850e-47 |
| Msa0564890 | Msa1310120 | 0.845359 | 4.266173e-59 | -8.615850e-47 |
| Msa0564890 | Msa1314280 | 0.824055 | 9.930540e-54 | -8.615850e-47 |
| Msa0564890 | Msa1320300 | 0.879264 | 1.436259e-69 | -8.615850e-47 |
| Msa0564890 | Msa1340590 | 0.858539 | 7.687768e-63 | -8.615850e-47 |
| Msa0564890 | Msa1342200 | 0.840101 | 1.064863e-57 | -8.615850e-47 |
| Msa0564890 | Msa1344520 | 0.830838 | 2.343306e-55 | -8.615850e-47 |
| Msa0564890 | Msa1369430 | 0.827728 | 1.332705e-54 | -8.615850e-47 |
| Msa0564890 | Msa1370210 | 0.804612 | 1.986858e-49 | -8.615850e-47 |
| Msa0564890 | Msa1382690 | 0.813072 | 3.079851e-51 | -8.615850e-47 |
| Msa0564890 | Msa1386330 | 0.803496 | 3.391041e-49 | -8.615850e-47 |
| Msa0564890 | Msa1397150 | 0.824448 | 8.026489e-54 | -8.615850e-47 |
| Msa0564890 | Msa1397580 | 0.853489 | 2.309628e-61 | -8.615850e-47 |
| Msa0564890 | Msa1402790 | 0.841480 | 4.632612e-58 | -8.615850e-47 |
| Msa0564890 | Msa1404000 | 0.895696 | 7.495842e-76 | -8.615850e-47 |
| Msa0564890 | Msa1408780 | 0.844441 | 7.545051e-59 | -8.615850e-47 |
| Msa0564890 | Msa1415310 | 0.885386 | 8.504534e-72 | -8.615850e-47 |
| Msa0564890 | Msa1422180 | 0.885672 | 6.644888e-72 | -8.615850e-47 |
| Msa0564890 | Msa1433120 | 0.904160 | 1.640784e-79 | -8.615850e-47 |
| Msa0564890 | Msa1438250 | 0.803020 | 4.254876e-49 | -8.615850e-47 |
| Msa0564890 | Msa1451570 | 0.812602 | 3.904482e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564890 | MtrunA17_Chr6g0469931 | 53.659 | 246 | 99 | 5 | 1 | 237 | 1 | 240 | 4.25e-78 | 259 |
| Msa0564890 | MtrunA17_Chr2g0279021 | 33.948 | 271 | 176 | 3 | 157 | 424 | 1 | 271 | 3.19e-45 | 164 |
| Msa0564890 | MtrunA17_Chr6g0469811 | 53.285 | 137 | 61 | 1 | 2 | 135 | 11 | 147 | 1.92e-43 | 152 |
| Msa0564890 | MtrunA17_Chr7g0259081 | 39.884 | 173 | 100 | 2 | 1 | 170 | 1 | 172 | 2.67e-32 | 122 |
| Msa0564890 | MtrunA17_Chr4g0077081 | 44.275 | 131 | 66 | 1 | 243 | 373 | 32 | 155 | 7.66e-32 | 120 |
| Msa0564890 | MtrunA17_Chr3g0093401 | 32.906 | 234 | 147 | 3 | 10 | 240 | 10 | 236 | 1.46e-30 | 119 |
| Msa0564890 | MtrunA17_Chr7g0234721 | 39.306 | 173 | 101 | 2 | 1 | 170 | 1 | 172 | 2.56e-30 | 119 |
| Msa0564890 | MtrunA17_Chr4g0010241 | 42.657 | 143 | 79 | 1 | 51 | 190 | 70 | 212 | 6.13e-28 | 111 |
| Msa0564890 | MtrunA17_Chr1g0206481 | 29.603 | 277 | 188 | 5 | 11 | 282 | 11 | 285 | 8.89e-28 | 113 |
| Msa0564890 | MtrunA17_Chr1g0193821 | 32.114 | 246 | 114 | 4 | 61 | 277 | 1 | 222 | 8.41e-26 | 106 |
| Msa0564890 | MtrunA17_Chr8g0374181 | 34.667 | 150 | 96 | 2 | 277 | 424 | 4 | 153 | 5.40e-23 | 99.0 |
| Msa0564890 | MtrunA17_Chr4g0019691 | 32.258 | 155 | 101 | 3 | 273 | 424 | 8 | 161 | 4.07e-22 | 94.0 |
| Msa0564890 | MtrunA17_Chr7g0270381 | 33.143 | 175 | 107 | 5 | 139 | 312 | 1 | 166 | 1.43e-21 | 92.0 |
| Msa0564890 | MtrunA17_Chr1g0167871 | 24.010 | 404 | 285 | 12 | 7 | 397 | 212 | 606 | 1.68e-20 | 95.9 |
| Msa0564890 | MtrunA17_Chr2g0278111 | 25.182 | 274 | 198 | 5 | 14 | 282 | 14 | 285 | 2.46e-20 | 92.4 |
| Msa0564890 | MtrunA17_Chr5g0411141 | 25.182 | 274 | 198 | 5 | 14 | 282 | 15 | 286 | 2.76e-20 | 92.0 |
| Msa0564890 | MtrunA17_Chr2g0309041 | 48.980 | 98 | 43 | 4 | 44 | 136 | 1 | 96 | 1.57e-17 | 78.2 |
| Msa0564890 | MtrunA17_Chr5g0423441 | 25.217 | 230 | 166 | 4 | 14 | 238 | 14 | 242 | 8.03e-17 | 80.5 |
| Msa0564890 | MtrunA17_Chr4g0014311 | 31.847 | 157 | 99 | 5 | 273 | 424 | 20 | 173 | 3.16e-16 | 79.3 |
| Msa0564890 | MtrunA17_Chr3g0096381 | 23.077 | 429 | 279 | 16 | 13 | 402 | 135 | 551 | 2.11e-15 | 79.3 |
| Msa0564890 | MtrunA17_Chr7g0226731 | 36.449 | 107 | 64 | 2 | 171 | 277 | 2 | 104 | 7.60e-14 | 67.8 |
| Msa0564890 | MtrunA17_Chr2g0280031 | 23.789 | 227 | 160 | 4 | 22 | 235 | 3 | 229 | 1.31e-13 | 71.2 |
| Msa0564890 | MtrunA17_Chr2g0304851 | 22.663 | 353 | 241 | 12 | 18 | 361 | 22 | 351 | 1.99e-12 | 69.3 |
| Msa0564890 | MtrunA17_Chr2g0304051 | 40.000 | 105 | 53 | 4 | 256 | 356 | 9 | 107 | 2.62e-12 | 63.5 |
| Msa0564890 | MtrunA17_Chr6g0471721 | 36.364 | 99 | 62 | 1 | 328 | 425 | 8 | 106 | 7.41e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564890 | AT1G52950.1 | 27.596 | 366 | 236 | 10 | 8 | 354 | 10 | 365 | 8.32e-33 | 133 |
| Msa0564890 | AT2G05642.1 | 23.917 | 531 | 301 | 15 | 17 | 502 | 17 | 489 | 4.60e-27 | 115 |
| Msa0564890 | AT5G08020.1 | 24.397 | 373 | 246 | 15 | 13 | 361 | 165 | 525 | 9.00e-19 | 90.5 |
| Msa0564890 | AT5G45400.1 | 23.743 | 358 | 233 | 14 | 13 | 345 | 307 | 649 | 5.26e-15 | 79.0 |
Find 151 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGATGTCTGTGATAATT+TGG | 0.188697 | 4_1:-65655384 | Msa0564890:CDS |
| TTCATTAGAAATGGTTCTTT+TGG | 0.195652 | 4_1:-65657499 | Msa0564890:CDS |
| TACTGTTGAGTATGATTATT+TGG | 0.207429 | 4_1:-65657104 | Msa0564890:CDS |
| CCCCGTCTTGTTTGAATCTA+AGG | 0.214148 | 4_1:+65655352 | None:intergenic |
| CCCTTCAACATAACAATTTC+AGG | 0.214213 | 4_1:+65655828 | None:intergenic |
| GTTATGGACTGCAGTTTAAT+TGG | 0.259597 | 4_1:-65656460 | Msa0564890:intron |
| ATTGGATGGAGGTGGTGTTT+TGG | 0.265890 | 4_1:-65655519 | Msa0564890:CDS |
| AGAATCAAATAATTGTGATA+TGG | 0.292394 | 4_1:+65656342 | None:intergenic |
| ATGGAACGGATTTATGTCTA+AGG | 0.309471 | 4_1:-65656770 | Msa0564890:CDS |
| TTGGGGAATATGTTGCATTA+TGG | 0.325746 | 4_1:-65656789 | Msa0564890:CDS |
| GTTGCCGGTGGTTTCTTTGA+TGG | 0.326310 | 4_1:-65655774 | Msa0564890:CDS |
| TTGGGTGGTGTGGATGCTTC+TGG | 0.327806 | 4_1:-65655500 | Msa0564890:CDS |
| GCGAAAGTTAAGATATTTAG+AGG | 0.332975 | 4_1:-65656712 | Msa0564890:intron |
| CCTCCATCTGTGACCGTACT+TGG | 0.335423 | 4_1:-65656421 | Msa0564890:CDS |
| CGGAGTGTTACTGCAGATTC+TGG | 0.335990 | 4_1:-65656232 | Msa0564890:CDS |
| ACAAATTAAACAACCTTTGT+AGG | 0.337668 | 4_1:+65655675 | None:intergenic |
| AAGATTGAATGTGCTTTGTT+TGG | 0.342548 | 4_1:-65656808 | Msa0564890:CDS |
| GACTTGTCCAAAACGAAATC+TGG | 0.345063 | 4_1:-65655249 | Msa0564890:CDS |
| AGTTCCTTGATTCCATTGTA+TGG | 0.345645 | 4_1:-65657163 | Msa0564890:CDS |
| TACTAAGATGATTATCTTTG+AGG | 0.348308 | 4_1:-65656929 | Msa0564890:CDS |
| ATAAATAAGCTGTTTCCTAA+TGG | 0.354254 | 4_1:+65657327 | None:intergenic |
| ACCCTAACCAGATTTCGTTT+TGG | 0.365249 | 4_1:+65655242 | None:intergenic |
| ATTGTACTTTAGTTGTCATC+TGG | 0.367172 | 4_1:+65657194 | None:intergenic |
| GACTGCAGTTTAATTGGCTT+GGG | 0.370514 | 4_1:-65656454 | Msa0564890:intron |
| CCAAGCTAATTCATTAGAAA+TGG | 0.372668 | 4_1:-65657508 | Msa0564890:CDS |
| TGAGAGCTCTCCTTCTGAAT+TGG | 0.373297 | 4_1:-65655537 | Msa0564890:CDS |
| AGATTGAATGTGCTTTGTTT+GGG | 0.379450 | 4_1:-65656807 | Msa0564890:CDS |
| GCAATAACCTCAGGAGCATC+TGG | 0.385408 | 4_1:+65656560 | None:intergenic |
| GGCAACTTTGCAGAATGTTA+AGG | 0.388882 | 4_1:-65656606 | Msa0564890:CDS |
| TGGTCACTCAAAGCCCTCTA+TGG | 0.389937 | 4_1:-65656398 | Msa0564890:CDS |
| ATCATACTCAACAGTATGAT+TGG | 0.393668 | 4_1:+65657111 | None:intergenic |
| TGTTCAGGGAGTTAAGATTC+AGG | 0.395136 | 4_1:-65657353 | Msa0564890:intron |
| CCTTGATCAGTCTATTTGTA+AGG | 0.403501 | 4_1:-65655576 | Msa0564890:intron |
| TTCTGGTGCATACTATTGTA+AGG | 0.404749 | 4_1:-65656215 | Msa0564890:CDS |
| AAGGTGGAAAAGCCTGTTGC+CGG | 0.405454 | 4_1:-65655789 | Msa0564890:CDS |
| TCTAATGAATTAGCTTGGTT+CGG | 0.408968 | 4_1:+65657513 | None:intergenic |
| GTCCAAAACGAAATCTGGTT+AGG | 0.411375 | 4_1:-65655244 | Msa0564890:CDS |
| GCCTTGCTGTTCGGTCATAA+TGG | 0.411851 | 4_1:-65657637 | Msa0564890:exon |
| GGTGTGAAGCGTAGACGGTT+TGG | 0.412973 | 4_1:-65655185 | Msa0564890:CDS |
| TCCTGAAATTGTTATGTTGA+AGG | 0.413015 | 4_1:-65655829 | Msa0564890:CDS |
| GCAACTTTGCAGAATGTTAA+GGG | 0.416920 | 4_1:-65656605 | Msa0564890:CDS |
| GTGTGAAGCGTAGACGGTTT+GGG | 0.418796 | 4_1:-65655184 | Msa0564890:CDS |
| GGACTGCAGTTTAATTGGCT+TGG | 0.423766 | 4_1:-65656455 | Msa0564890:intron |
| TACAGAGTTAAGAGGGTTTG+TGG | 0.433044 | 4_1:-65655747 | Msa0564890:CDS |
| GTTGTGAGTGGCTTCGTTGA+GGG | 0.433223 | 4_1:-65656289 | Msa0564890:CDS |
| AGCACGATACGATCCAGTAC+TGG | 0.435009 | 4_1:+65657243 | None:intergenic |
| TGAGAAGCAGTGCTCTGTAT+TGG | 0.438330 | 4_1:-65655987 | Msa0564890:CDS |
| TAACTTGGAGGATTAGAGTC+AGG | 0.438454 | 4_1:-65657572 | Msa0564890:CDS |
| TGATAAGCATGTTATACAAA+TGG | 0.439844 | 4_1:-65656188 | Msa0564890:CDS |
| GAAGAGATTGCGAGAGGGCG+AGG | 0.445617 | 4_1:-65657296 | Msa0564890:CDS |
| TTAAGATTCAGGCAACCATT+AGG | 0.445994 | 4_1:-65657342 | Msa0564890:CDS |
| TCCAAAACGAAATCTGGTTA+GGG | 0.450324 | 4_1:-65655243 | Msa0564890:CDS |
| ATCTGGAACACTATCTTGTA+TGG | 0.454736 | 4_1:+65657211 | None:intergenic |
| TCAAAGAAACCACCGGCAAC+AGG | 0.455980 | 4_1:+65655777 | None:intergenic |
| CAAATTAAACAACCTTTGTA+GGG | 0.458813 | 4_1:+65655676 | None:intergenic |
| AAGAAACTCCTCCTCCATAG+AGG | 0.459627 | 4_1:+65656384 | None:intergenic |
| GTTGCAAAATTTGCTTCAGA+TGG | 0.463442 | 4_1:-65655711 | Msa0564890:CDS |
| TACCTGGTCGATTAACTTGG+AGG | 0.476426 | 4_1:-65657584 | Msa0564890:CDS |
| CTGAGAGTTGATGATGGTAC+TGG | 0.481703 | 4_1:-65656055 | Msa0564890:CDS |
| TTTATGTCTAAGGGGTTTGA+AGG | 0.483646 | 4_1:-65656760 | Msa0564890:CDS |
| GTTGAGTATGATTATTTGGT+TGG | 0.488599 | 4_1:-65657100 | Msa0564890:intron |
| TTGTACCTGGTCGATTAACT+TGG | 0.491669 | 4_1:-65657587 | Msa0564890:CDS |
| TGCAGCACCTCATGTATCCT+TGG | 0.493006 | 4_1:-65655471 | Msa0564890:CDS |
| GTTCCTTGATTCCATTGTAT+GGG | 0.496337 | 4_1:-65657162 | Msa0564890:CDS |
| ATGTTATACAAATGGTTCCT+AGG | 0.499259 | 4_1:-65656180 | Msa0564890:intron |
| TGGTTCGGCTTCAGAAAAGT+TGG | 0.500218 | 4_1:+65657528 | None:intergenic |
| ATCCTGCTTGCAAGTGTCAC+CGG | 0.500441 | 4_1:-65656252 | Msa0564890:CDS |
| TGTTATAGATGTCATGGGGC+TGG | 0.501083 | 4_1:-65656998 | Msa0564890:intron |
| CCTGAAATTGTTATGTTGAA+GGG | 0.504826 | 4_1:-65655828 | Msa0564890:CDS |
| CCATTTCTAATGAATTAGCT+TGG | 0.506089 | 4_1:+65657508 | None:intergenic |
| CCTTCTGAATTGGATGGAGG+TGG | 0.507276 | 4_1:-65655527 | Msa0564890:CDS |
| GAGTCAGGGTGGTTCGTATG+TGG | 0.509963 | 4_1:-65657557 | Msa0564890:CDS |
| ATGGTTCTTACAGAGTTAAG+AGG | 0.511890 | 4_1:-65655755 | Msa0564890:CDS |
| CCAAATTATCACAGACATCA+AGG | 0.521631 | 4_1:+65655384 | None:intergenic |
| AACGAGGTGTGAAGCGTAGA+CGG | 0.522549 | 4_1:-65655190 | Msa0564890:CDS |
| CTGAAGAGAGGGAGTATGTG+AGG | 0.522913 | 4_1:-65656963 | Msa0564890:CDS |
| AACTTGGAGGATTAGAGTCA+GGG | 0.524116 | 4_1:-65657571 | Msa0564890:CDS |
| ACAATTATTTGATTCTGAAG+AGG | 0.525212 | 4_1:-65656335 | Msa0564890:CDS |
| ACCTTAGATTCAAACAAGAC+GGG | 0.525601 | 4_1:-65655353 | Msa0564890:CDS |
| GAGAGGGAGTATGTGAGGGA+TGG | 0.528261 | 4_1:-65656958 | Msa0564890:CDS |
| ATACAATGGAATCAAGGAAC+TGG | 0.529645 | 4_1:+65657165 | None:intergenic |
| CTTGATCAGTCTATTTGTAA+GGG | 0.531575 | 4_1:-65655575 | Msa0564890:intron |
| TAGCCCATACAATGGAATCA+AGG | 0.532019 | 4_1:+65657159 | None:intergenic |
| TTATTTGATTCTGAAGAGGA+TGG | 0.533334 | 4_1:-65656331 | Msa0564890:CDS |
| AGCTCTCCTTCTGAATTGGA+TGG | 0.533380 | 4_1:-65655533 | Msa0564890:CDS |
| TCTTTGAGGTTACCGACCAC+AGG | 0.536336 | 4_1:-65656915 | Msa0564890:intron |
| TGGAACGGATTTATGTCTAA+GGG | 0.538737 | 4_1:-65656769 | Msa0564890:CDS |
| CCATCTGTGACCGTACTTGG+TGG | 0.539147 | 4_1:-65656418 | Msa0564890:CDS |
| GCAAACTGCACAACAACTAC+AGG | 0.542135 | 4_1:+65656733 | None:intergenic |
| CTCCGGTGACACTTGCAAGC+AGG | 0.542933 | 4_1:+65656250 | None:intergenic |
| TATTTGATTCTGAAGAGGAT+GGG | 0.547593 | 4_1:-65656330 | Msa0564890:CDS |
| TCCTTAAAAGCAATAACCTC+AGG | 0.547824 | 4_1:+65656551 | None:intergenic |
| CGACGACGATGATGATTCAC+AGG | 0.550136 | 4_1:-65655288 | Msa0564890:CDS |
| CACTATCTTGTATGGATGAG+TGG | 0.551940 | 4_1:+65657219 | None:intergenic |
| TACTGCTGTGTCTGAAGAGA+GGG | 0.552441 | 4_1:-65656974 | Msa0564890:CDS |
| CTCAAAGCCCTCTATGGAGG+AGG | 0.553242 | 4_1:-65656392 | Msa0564890:CDS |
| CCAAGTACGGTCACAGATGG+AGG | 0.562028 | 4_1:+65656421 | None:intergenic |
| GAATATGTTGCATTATGGAA+CGG | 0.562054 | 4_1:-65656784 | Msa0564890:CDS |
| TCAGTCTATTTGTAAGGGGA+AGG | 0.562281 | 4_1:-65655570 | Msa0564890:intron |
| AGTCAGGGTGGTTCGTATGT+GGG | 0.563817 | 4_1:-65657556 | Msa0564890:CDS |
| TACCTTAGATTCAAACAAGA+CGG | 0.573913 | 4_1:-65655354 | Msa0564890:CDS |
| CTTTGAGTGACCACCAAGTA+CGG | 0.577388 | 4_1:+65656408 | None:intergenic |
| CCACCAAGTACGGTCACAGA+TGG | 0.577940 | 4_1:+65656418 | None:intergenic |
| TGGTTCTTACAGAGTTAAGA+GGG | 0.578123 | 4_1:-65655754 | Msa0564890:CDS |
| TTGTGAGTGGCTTCGTTGAG+GGG | 0.579294 | 4_1:-65656288 | Msa0564890:CDS |
| GTCTATTTGTAAGGGGAAGG+TGG | 0.582361 | 4_1:-65655567 | Msa0564890:CDS |
| TTGATCAGTCTATTTGTAAG+GGG | 0.586828 | 4_1:-65655574 | Msa0564890:intron |
| CAGACTAAAATCACCATCCA+AGG | 0.587648 | 4_1:+65655454 | None:intergenic |
| TCTGGTGCATACTATTGTAA+GGG | 0.590940 | 4_1:-65656214 | Msa0564890:CDS |
| TGTTGTGAGTGGCTTCGTTG+AGG | 0.591480 | 4_1:-65656290 | Msa0564890:CDS |
| GCACGATACGATCCAGTACT+GGG | 0.596613 | 4_1:+65657244 | None:intergenic |
| ATCCTCCAAGTTAATCGACC+AGG | 0.599377 | 4_1:+65657582 | None:intergenic |
| TCTCCTTCTGAATTGGATGG+AGG | 0.604033 | 4_1:-65655530 | Msa0564890:CDS |
| TGAGAGTTGATGATGGTACT+GGG | 0.606121 | 4_1:-65656054 | Msa0564890:CDS |
| CAAGTACGGTCACAGATGGA+GGG | 0.608344 | 4_1:+65656422 | None:intergenic |
| AGTAAATCCAGATGCTCCTG+AGG | 0.610017 | 4_1:-65656567 | Msa0564890:CDS |
| AGAAACTCCTCCTCCATAGA+GGG | 0.613690 | 4_1:+65656385 | None:intergenic |
| GTGGAAAAGCCTGTTGCCGG+TGG | 0.614959 | 4_1:-65655786 | Msa0564890:CDS |
| GCACCTCATGTATCCTTGGA+TGG | 0.618341 | 4_1:-65655467 | Msa0564890:CDS |
| TCCATTATGACCGAACAGCA+AGG | 0.619087 | 4_1:+65657636 | None:intergenic |
| ATCAAGCTGAGAGTTGATGA+TGG | 0.620341 | 4_1:-65656061 | Msa0564890:CDS |
| ATGATTGGATACATCAACAA+TGG | 0.621943 | 4_1:+65657126 | None:intergenic |
| CCACCTCCATCCAATTCAGA+AGG | 0.625166 | 4_1:+65655527 | None:intergenic |
| CCTTAGATTCAAACAAGACG+GGG | 0.628385 | 4_1:-65655352 | Msa0564890:CDS |
| GTTGTGAGTGCTGTTGTGAG+TGG | 0.630705 | 4_1:-65656301 | Msa0564890:CDS |
| TGGATTTACTAAAAGCCTTG+TGG | 0.632690 | 4_1:+65656580 | None:intergenic |
| TTTCAGAAGAGATTGCGAGA+GGG | 0.632742 | 4_1:-65657301 | Msa0564890:intron |
| GGAACGGATTTATGTCTAAG+GGG | 0.638607 | 4_1:-65656768 | Msa0564890:CDS |
| TGATTACAGGGTGACAGTGT+TGG | 0.639641 | 4_1:-65655861 | Msa0564890:intron |
| CAGAATCTGCAGTAACACTC+CGG | 0.640255 | 4_1:+65656233 | None:intergenic |
| AAATTAAACAACCTTTGTAG+GGG | 0.640477 | 4_1:+65655677 | None:intergenic |
| TGAAGAGAGGGAGTATGTGA+GGG | 0.640486 | 4_1:-65656962 | Msa0564890:CDS |
| TTCGTGAATGACATTGTACC+TGG | 0.641005 | 4_1:-65657600 | Msa0564890:CDS |
| TTACTGCTGTGTCTGAAGAG+AGG | 0.641606 | 4_1:-65656975 | Msa0564890:CDS |
| AATTAATACACACCTGTGGT+CGG | 0.642408 | 4_1:+65656903 | None:intergenic |
| TTCAACATAACAATTTCAGG+AGG | 0.644171 | 4_1:+65655831 | None:intergenic |
| CAGGGTGGTTCGTATGTGGG+AGG | 0.644263 | 4_1:-65657553 | Msa0564890:CDS |
| GATTGAATGTGCTTTGTTTG+GGG | 0.647686 | 4_1:-65656806 | Msa0564890:CDS |
| AGAACCATCAAAGAAACCAC+CGG | 0.648192 | 4_1:+65655770 | None:intergenic |
| TGTGAGTGGCTTCGTTGAGG+GGG | 0.649441 | 4_1:-65656287 | Msa0564890:CDS |
| GTGAAAGATAGCCCATACAA+TGG | 0.649522 | 4_1:+65657151 | None:intergenic |
| TCACTCAAAGCCCTCTATGG+AGG | 0.650490 | 4_1:-65656395 | Msa0564890:CDS |
| AAGTACGGTCACAGATGGAG+GGG | 0.659455 | 4_1:+65656423 | None:intergenic |
| GTTTCAGAAGAGATTGCGAG+AGG | 0.672157 | 4_1:-65657302 | Msa0564890:intron |
| TCACCATCCAAGGATACATG+AGG | 0.689776 | 4_1:+65655464 | None:intergenic |
| ATATAGTTACACCCCTACAA+AGG | 0.690487 | 4_1:-65655688 | Msa0564890:intron |
| TTGGAGGATTAGAGTCAGGG+TGG | 0.706514 | 4_1:-65657568 | Msa0564890:CDS |
| AGAATGTTAAGGGTACCACA+AGG | 0.722079 | 4_1:-65656595 | Msa0564890:CDS |
| CTTAGATTCAAACAAGACGG+GGG | 0.739613 | 4_1:-65655351 | Msa0564890:CDS |
| GAGAGTTGATGATGGTACTG+GGG | 0.749851 | 4_1:-65656053 | Msa0564890:CDS |
| GACAGTGATGATGTTGAACG+AGG | 0.754316 | 4_1:-65655206 | Msa0564890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATGTTTTTGATAATTATTT+TGG | - | chr4_1:65655794-65655813 | Msa0564890:CDS | 15.0% |
| !!! | ATATTCATGATTTTTTGTTA+TGG | - | chr4_1:65656345-65656364 | Msa0564890:CDS | 15.0% |
| !!! | CTTATTTTATTTGTAGATAT+AGG | - | chr4_1:65656737-65656756 | Msa0564890:CDS | 15.0% |
| !!! | TTTTAGTATTTTTTTGATGC+TGG | - | chr4_1:65655750-65655769 | Msa0564890:CDS | 20.0% |
| !! | AGAATCAAATAATTGTGATA+TGG | + | chr4_1:65656482-65656501 | None:intergenic | 20.0% |
| !! | TTACTTGTCAAAGATAAAAA+GGG | + | chr4_1:65656700-65656719 | None:intergenic | 20.0% |
| !! | ATTACTTGTCAAAGATAAAA+AGG | + | chr4_1:65656701-65656720 | None:intergenic | 20.0% |
| !! | TTCATTAGAAATGGTTCTTT+TGG | - | chr4_1:65655322-65655341 | Msa0564890:CDS | 25.0% |
| ! | TACGTATATTTGATTGCATA+TGG | - | chr4_1:65655354-65655373 | Msa0564890:CDS | 25.0% |
| !!! | ATGTTTTTTTCCTTTACCTT+TGG | - | chr4_1:65655444-65655463 | Msa0564890:CDS | 25.0% |
| !! | ATAAATAAGCTGTTTCCTAA+TGG | + | chr4_1:65655497-65655516 | None:intergenic | 25.0% |
| ! | TACTGTTGAGTATGATTATT+TGG | - | chr4_1:65655717-65655736 | Msa0564890:CDS | 25.0% |
| !!! | TGATTTTGTTATAGATGTCA+TGG | - | chr4_1:65655817-65655836 | Msa0564890:CDS | 25.0% |
| !!! | GATTTTGTTATAGATGTCAT+GGG | - | chr4_1:65655818-65655837 | Msa0564890:CDS | 25.0% |
| !!! | ATTTTGTTATAGATGTCATG+GGG | - | chr4_1:65655819-65655838 | Msa0564890:CDS | 25.0% |
| ! | TACTAAGATGATTATCTTTG+AGG | - | chr4_1:65655892-65655911 | Msa0564890:intron | 25.0% |
| !!! | TCAATTCTGTATTTTTTCAG+TGG | - | chr4_1:65655989-65656008 | Msa0564890:CDS | 25.0% |
| !!! | GTTTTTTGTTTTTGTAGACA+AGG | - | chr4_1:65656194-65656213 | Msa0564890:CDS | 25.0% |
| !! | AATTGTGATATGGTTTTCTT+AGG | + | chr4_1:65656472-65656491 | None:intergenic | 25.0% |
| !! | ACAATTATTTGATTCTGAAG+AGG | - | chr4_1:65656486-65656505 | Msa0564890:intron | 25.0% |
| ! | TGATAAGCATGTTATACAAA+TGG | - | chr4_1:65656633-65656652 | Msa0564890:intron | 25.0% |
| ! | AAATTAAACAACCTTTGTAG+GGG | + | chr4_1:65657147-65657166 | None:intergenic | 25.0% |
| ! | CAAATTAAACAACCTTTGTA+GGG | + | chr4_1:65657148-65657167 | None:intergenic | 25.0% |
| ! | ACAAATTAAACAACCTTTGT+AGG | + | chr4_1:65657149-65657168 | None:intergenic | 25.0% |
| ! | TCTAATGAATTAGCTTGGTT+CGG | + | chr4_1:65655311-65655330 | None:intergenic | 30.0% |
| CCATTTCTAATGAATTAGCT+TGG | + | chr4_1:65655316-65655335 | None:intergenic | 30.0% | |
| CCAAGCTAATTCATTAGAAA+TGG | - | chr4_1:65655313-65655332 | Msa0564890:CDS | 30.0% | |
| !!! | TTGTGTGTGTTTTTTGTGTT+GGG | - | chr4_1:65655394-65655413 | Msa0564890:CDS | 30.0% |
| ATTGTACTTTAGTTGTCATC+TGG | + | chr4_1:65655630-65655649 | None:intergenic | 30.0% | |
| ATGATTGGATACATCAACAA+TGG | + | chr4_1:65655698-65655717 | None:intergenic | 30.0% | |
| ATCATACTCAACAGTATGAT+TGG | + | chr4_1:65655713-65655732 | None:intergenic | 30.0% | |
| GTTGAGTATGATTATTTGGT+TGG | - | chr4_1:65655721-65655740 | Msa0564890:CDS | 30.0% | |
| AACAAATTAATACACACCTG+TGG | + | chr4_1:65655925-65655944 | None:intergenic | 30.0% | |
| ! | AAGATTGAATGTGCTTTGTT+TGG | - | chr4_1:65656013-65656032 | Msa0564890:CDS | 30.0% |
| !! | AGATTGAATGTGCTTTGTTT+GGG | - | chr4_1:65656014-65656033 | Msa0564890:CDS | 30.0% |
| GAATATGTTGCATTATGGAA+CGG | - | chr4_1:65656037-65656056 | Msa0564890:CDS | 30.0% | |
| GCGAAAGTTAAGATATTTAG+AGG | - | chr4_1:65656109-65656128 | Msa0564890:intron | 30.0% | |
| !! | AGGTTATTGCTTTTAAGGAT+CGG | - | chr4_1:65656274-65656293 | Msa0564890:CDS | 30.0% |
| ! | TTATTTGATTCTGAAGAGGA+TGG | - | chr4_1:65656490-65656509 | Msa0564890:intron | 30.0% |
| ! | TATTTGATTCTGAAGAGGAT+GGG | - | chr4_1:65656491-65656510 | Msa0564890:intron | 30.0% |
| ATGTTATACAAATGGTTCCT+AGG | - | chr4_1:65656641-65656660 | Msa0564890:intron | 30.0% | |
| TTCAACATAACAATTTCAGG+AGG | + | chr4_1:65656993-65657012 | None:intergenic | 30.0% | |
| TCCTGAAATTGTTATGTTGA+AGG | - | chr4_1:65656992-65657011 | Msa0564890:CDS | 30.0% | |
| CCTGAAATTGTTATGTTGAA+GGG | - | chr4_1:65656993-65657012 | Msa0564890:CDS | 30.0% | |
| !! | ACATAGATTTCTTTTCAAGG+TGG | - | chr4_1:65657016-65657035 | Msa0564890:intron | 30.0% |
| CTTGATCAGTCTATTTGTAA+GGG | - | chr4_1:65657246-65657265 | Msa0564890:CDS | 30.0% | |
| TTGATCAGTCTATTTGTAAG+GGG | - | chr4_1:65657247-65657266 | Msa0564890:CDS | 30.0% | |
| TACCTTAGATTCAAACAAGA+CGG | - | chr4_1:65657467-65657486 | Msa0564890:intron | 30.0% | |
| ! | AATGGTTCTTTTGGATCAGA+TGG | - | chr4_1:65655331-65655350 | Msa0564890:CDS | 35.0% |
| !!! | GTTGTGTGTGTTTTTTGTGT+TGG | - | chr4_1:65655393-65655412 | Msa0564890:CDS | 35.0% |
| AAAAAACATCAACGCCAATC+CGG | + | chr4_1:65655433-65655452 | None:intergenic | 35.0% | |
| TTAAGATTCAGGCAACCATT+AGG | - | chr4_1:65655479-65655498 | Msa0564890:CDS | 35.0% | |
| ! | ATCTGGAACACTATCTTGTA+TGG | + | chr4_1:65655613-65655632 | None:intergenic | 35.0% |
| ATACAATGGAATCAAGGAAC+TGG | + | chr4_1:65655659-65655678 | None:intergenic | 35.0% | |
| AGTTCCTTGATTCCATTGTA+TGG | - | chr4_1:65655658-65655677 | Msa0564890:intron | 35.0% | |
| GTTCCTTGATTCCATTGTAT+GGG | - | chr4_1:65655659-65655678 | Msa0564890:intron | 35.0% | |
| AATTAATACACACCTGTGGT+CGG | + | chr4_1:65655921-65655940 | None:intergenic | 35.0% | |
| !! | GATTGAATGTGCTTTGTTTG+GGG | - | chr4_1:65656015-65656034 | Msa0564890:CDS | 35.0% |
| TTGGGGAATATGTTGCATTA+TGG | - | chr4_1:65656032-65656051 | Msa0564890:CDS | 35.0% | |
| ! | ATGGAACGGATTTATGTCTA+AGG | - | chr4_1:65656051-65656070 | Msa0564890:CDS | 35.0% |
| ! | TGGAACGGATTTATGTCTAA+GGG | - | chr4_1:65656052-65656071 | Msa0564890:CDS | 35.0% |
| TTTATGTCTAAGGGGTTTGA+AGG | - | chr4_1:65656061-65656080 | Msa0564890:CDS | 35.0% | |
| GTTTGTTTGTGAGTTGTTTG+TGG | - | chr4_1:65656142-65656161 | Msa0564890:intron | 35.0% | |
| GCAACTTTGCAGAATGTTAA+GGG | - | chr4_1:65656216-65656235 | Msa0564890:CDS | 35.0% | |
| TGGATTTACTAAAAGCCTTG+TGG | + | chr4_1:65656244-65656263 | None:intergenic | 35.0% | |
| !! | TCCTGAGGTTATTGCTTTTA+AGG | - | chr4_1:65656269-65656288 | Msa0564890:CDS | 35.0% |
| TCCTTAAAAGCAATAACCTC+AGG | + | chr4_1:65656273-65656292 | None:intergenic | 35.0% | |
| TCGTTGTAGCGTGTATTATT+TGG | - | chr4_1:65656306-65656325 | Msa0564890:CDS | 35.0% | |
| ! | GTTATGGACTGCAGTTTAAT+TGG | - | chr4_1:65656361-65656380 | Msa0564890:CDS | 35.0% |
| TTCTGGTGCATACTATTGTA+AGG | - | chr4_1:65656606-65656625 | Msa0564890:CDS | 35.0% | |
| TCTGGTGCATACTATTGTAA+GGG | - | chr4_1:65656607-65656626 | Msa0564890:CDS | 35.0% | |
| CACTACATGATACATTACCT+AGG | + | chr4_1:65656661-65656680 | None:intergenic | 35.0% | |
| CTAGGTAATGTATCATGTAG+TGG | - | chr4_1:65656659-65656678 | Msa0564890:intron | 35.0% | |
| ! | TTTCTGATCGTTTTCATGTG+TGG | - | chr4_1:65656937-65656956 | Msa0564890:CDS | 35.0% |
| ! | TTTTCATGTGTGGTGATTAC+AGG | - | chr4_1:65656947-65656966 | Msa0564890:CDS | 35.0% |
| TTTCATGTGTGGTGATTACA+GGG | - | chr4_1:65656948-65656967 | Msa0564890:CDS | 35.0% | |
| CCCTTCAACATAACAATTTC+AGG | + | chr4_1:65656996-65657015 | None:intergenic | 35.0% | |
| ! | GGGACATAGATTTCTTTTCA+AGG | - | chr4_1:65657013-65657032 | Msa0564890:intron | 35.0% |
| ATGGTTCTTACAGAGTTAAG+AGG | - | chr4_1:65657066-65657085 | Msa0564890:intron | 35.0% | |
| TGGTTCTTACAGAGTTAAGA+GGG | - | chr4_1:65657067-65657086 | Msa0564890:intron | 35.0% | |
| ! | GTTGCAAAATTTGCTTCAGA+TGG | - | chr4_1:65657110-65657129 | Msa0564890:CDS | 35.0% |
| ATATAGTTACACCCCTACAA+AGG | - | chr4_1:65657133-65657152 | Msa0564890:CDS | 35.0% | |
| CCTTACAAATAGACTGATCA+AGG | + | chr4_1:65657248-65657267 | None:intergenic | 35.0% | |
| CCTTGATCAGTCTATTTGTA+AGG | - | chr4_1:65657245-65657264 | Msa0564890:CDS | 35.0% | |
| CCAAATTATCACAGACATCA+AGG | + | chr4_1:65657440-65657459 | None:intergenic | 35.0% | |
| CCTTGATGTCTGTGATAATT+TGG | - | chr4_1:65657437-65657456 | Msa0564890:intron | 35.0% | |
| ACCTTAGATTCAAACAAGAC+GGG | - | chr4_1:65657468-65657487 | Msa0564890:intron | 35.0% | |
| TCCAAAACGAAATCTGGTTA+GGG | - | chr4_1:65657578-65657597 | Msa0564890:CDS | 35.0% | |
| TTCGTGAATGACATTGTACC+TGG | - | chr4_1:65655221-65655240 | Msa0564890:CDS | 40.0% | |
| TTGTACCTGGTCGATTAACT+TGG | - | chr4_1:65655234-65655253 | Msa0564890:CDS | 40.0% | |
| TAACTTGGAGGATTAGAGTC+AGG | - | chr4_1:65655249-65655268 | Msa0564890:CDS | 40.0% | |
| AACTTGGAGGATTAGAGTCA+GGG | - | chr4_1:65655250-65655269 | Msa0564890:CDS | 40.0% | |
| CAAAAAACACACACAACAGC+AGG | + | chr4_1:65655390-65655409 | None:intergenic | 40.0% | |
| ! | TTTTTGTGTTGGGCTGTCAT+TGG | - | chr4_1:65655404-65655423 | Msa0564890:CDS | 40.0% |
| TCCTTTACCTTTGGTTGTTC+AGG | - | chr4_1:65655453-65655472 | Msa0564890:CDS | 40.0% | |
| CCTTTACCTTTGGTTGTTCA+GGG | - | chr4_1:65655454-65655473 | Msa0564890:CDS | 40.0% | |
| TTAACTCCCTGAACAACCAA+AGG | + | chr4_1:65655463-65655482 | None:intergenic | 40.0% | |
| TGTTCAGGGAGTTAAGATTC+AGG | - | chr4_1:65655468-65655487 | Msa0564890:CDS | 40.0% | |
| TTTCAGAAGAGATTGCGAGA+GGG | - | chr4_1:65655520-65655539 | Msa0564890:CDS | 40.0% | |
| CACTATCTTGTATGGATGAG+TGG | + | chr4_1:65655605-65655624 | None:intergenic | 40.0% | |
| TAGCCCATACAATGGAATCA+AGG | + | chr4_1:65655665-65655684 | None:intergenic | 40.0% | |
| GTGAAAGATAGCCCATACAA+TGG | + | chr4_1:65655673-65655692 | None:intergenic | 40.0% | |
| ! | GGAACGGATTTATGTCTAAG+GGG | - | chr4_1:65656053-65656072 | Msa0564890:CDS | 40.0% |
| GGCAACTTTGCAGAATGTTA+AGG | - | chr4_1:65656215-65656234 | Msa0564890:CDS | 40.0% | |
| !! | AGAATGTTAAGGGTACCACA+AGG | - | chr4_1:65656226-65656245 | Msa0564890:CDS | 40.0% |
| ! | GACTGCAGTTTAATTGGCTT+GGG | - | chr4_1:65656367-65656386 | Msa0564890:CDS | 40.0% |
| !! | ATCAAGCTGAGAGTTGATGA+TGG | - | chr4_1:65656760-65656779 | Msa0564890:CDS | 40.0% |
| !! | TGAGAGTTGATGATGGTACT+GGG | - | chr4_1:65656767-65656786 | Msa0564890:CDS | 40.0% |
| AGAACCATCAAAGAAACCAC+CGG | + | chr4_1:65657054-65657073 | None:intergenic | 40.0% | |
| TACAGAGTTAAGAGGGTTTG+TGG | - | chr4_1:65657074-65657093 | Msa0564890:intron | 40.0% | |
| TCAGTCTATTTGTAAGGGGA+AGG | - | chr4_1:65657251-65657270 | Msa0564890:CDS | 40.0% | |
| CAGACTAAAATCACCATCCA+AGG | + | chr4_1:65657370-65657389 | None:intergenic | 40.0% | |
| !! | CTTGGATGGTGATTTTAGTC+TGG | - | chr4_1:65657368-65657387 | Msa0564890:intron | 40.0% |
| CCTTAGATTCAAACAAGACG+GGG | - | chr4_1:65657469-65657488 | Msa0564890:intron | 40.0% | |
| CTTAGATTCAAACAAGACGG+GGG | - | chr4_1:65657470-65657489 | Msa0564890:intron | 40.0% | |
| GACTTGTCCAAAACGAAATC+TGG | - | chr4_1:65657572-65657591 | Msa0564890:CDS | 40.0% | |
| GTCCAAAACGAAATCTGGTT+AGG | - | chr4_1:65657577-65657596 | Msa0564890:CDS | 40.0% | |
| ! | ACCCTAACCAGATTTCGTTT+TGG | + | chr4_1:65657582-65657601 | None:intergenic | 40.0% |
| ! | TCTGGTTAGGGTTTTTGATG+TGG | - | chr4_1:65657590-65657609 | Msa0564890:CDS | 40.0% |
| TCCATTATGACCGAACAGCA+AGG | + | chr4_1:65655188-65655207 | None:intergenic | 45.0% | |
| ! | TACCTGGTCGATTAACTTGG+AGG | - | chr4_1:65655237-65655256 | Msa0564890:CDS | 45.0% |
| ATCCTCCAAGTTAATCGACC+AGG | + | chr4_1:65655242-65655261 | None:intergenic | 45.0% | |
| ! | TGGTTCGGCTTCAGAAAAGT+TGG | + | chr4_1:65655296-65655315 | None:intergenic | 45.0% |
| CCCTGAACAACCAAAGGTAA+AGG | + | chr4_1:65655457-65655476 | None:intergenic | 45.0% | |
| GTTTCAGAAGAGATTGCGAG+AGG | - | chr4_1:65655519-65655538 | Msa0564890:CDS | 45.0% | |
| ! | TTTTCTGTTGCACCCAGTAC+TGG | - | chr4_1:65655565-65655584 | Msa0564890:CDS | 45.0% |
| TGTTATAGATGTCATGGGGC+TGG | - | chr4_1:65655823-65655842 | Msa0564890:CDS | 45.0% | |
| TTACTGCTGTGTCTGAAGAG+AGG | - | chr4_1:65655846-65655865 | Msa0564890:CDS | 45.0% | |
| TACTGCTGTGTCTGAAGAGA+GGG | - | chr4_1:65655847-65655866 | Msa0564890:CDS | 45.0% | |
| ! | TGAAGAGAGGGAGTATGTGA+GGG | - | chr4_1:65655859-65655878 | Msa0564890:intron | 45.0% |
| GCAAACTGCACAACAACTAC+AGG | + | chr4_1:65656091-65656110 | None:intergenic | 45.0% | |
| AGTAAATCCAGATGCTCCTG+AGG | - | chr4_1:65656254-65656273 | Msa0564890:CDS | 45.0% | |
| GGACTGCAGTTTAATTGGCT+TGG | - | chr4_1:65656366-65656385 | Msa0564890:CDS | 45.0% | |
| CTTTGAGTGACCACCAAGTA+CGG | + | chr4_1:65656416-65656435 | None:intergenic | 45.0% | |
| AGAAACTCCTCCTCCATAGA+GGG | + | chr4_1:65656439-65656458 | None:intergenic | 45.0% | |
| AAGAAACTCCTCCTCCATAG+AGG | + | chr4_1:65656440-65656459 | None:intergenic | 45.0% | |
| CAGAATCTGCAGTAACACTC+CGG | + | chr4_1:65656591-65656610 | None:intergenic | 45.0% | |
| !! | CTGAGAGTTGATGATGGTAC+TGG | - | chr4_1:65656766-65656785 | Msa0564890:CDS | 45.0% |
| !! | GAGAGTTGATGATGGTACTG+GGG | - | chr4_1:65656768-65656787 | Msa0564890:CDS | 45.0% |
| TGAGAAGCAGTGCTCTGTAT+TGG | - | chr4_1:65656834-65656853 | Msa0564890:intron | 45.0% | |
| TGATTACAGGGTGACAGTGT+TGG | - | chr4_1:65656960-65656979 | Msa0564890:CDS | 45.0% | |
| GTCTATTTGTAAGGGGAAGG+TGG | - | chr4_1:65657254-65657273 | Msa0564890:CDS | 45.0% | |
| TGAGAGCTCTCCTTCTGAAT+TGG | - | chr4_1:65657284-65657303 | Msa0564890:CDS | 45.0% | |
| AGCTCTCCTTCTGAATTGGA+TGG | - | chr4_1:65657288-65657307 | Msa0564890:CDS | 45.0% | |
| TCTCCTTCTGAATTGGATGG+AGG | - | chr4_1:65657291-65657310 | Msa0564890:CDS | 45.0% | |
| ! | ATTGGATGGAGGTGGTGTTT+TGG | - | chr4_1:65657302-65657321 | Msa0564890:intron | 45.0% |
| ! | TTGGATGGAGGTGGTGTTTT+GGG | - | chr4_1:65657303-65657322 | Msa0564890:intron | 45.0% |
| TCACCATCCAAGGATACATG+AGG | + | chr4_1:65657360-65657379 | None:intergenic | 45.0% | |
| !! | CCCCGTCTTGTTTGAATCTA+AGG | + | chr4_1:65657472-65657491 | None:intergenic | 45.0% |
| !! | CATCTTTTGGCTGACTTCGT+TGG | - | chr4_1:65657498-65657517 | Msa0564890:CDS | 45.0% |
| ! | GGTTAGGGTTTTTGATGTGG+TGG | - | chr4_1:65657593-65657612 | Msa0564890:CDS | 45.0% |
| ! | GACAGTGATGATGTTGAACG+AGG | - | chr4_1:65657615-65657634 | Msa0564890:CDS | 45.0% |
| !! | GCCTTGCTGTTCGGTCATAA+TGG | - | chr4_1:65655184-65655203 | Msa0564890:CDS | 50.0% |
| TTGGAGGATTAGAGTCAGGG+TGG | - | chr4_1:65655253-65655272 | Msa0564890:CDS | 50.0% | |
| AGTCAGGGTGGTTCGTATGT+GGG | - | chr4_1:65655265-65655284 | Msa0564890:CDS | 50.0% | |
| GCACGATACGATCCAGTACT+GGG | + | chr4_1:65655580-65655599 | None:intergenic | 50.0% | |
| AGCACGATACGATCCAGTAC+TGG | + | chr4_1:65655581-65655600 | None:intergenic | 50.0% | |
| ! | CTGAAGAGAGGGAGTATGTG+AGG | - | chr4_1:65655858-65655877 | Msa0564890:intron | 50.0% |
| !! | TCTTTGAGGTTACCGACCAC+AGG | - | chr4_1:65655906-65655925 | Msa0564890:intron | 50.0% |
| !! | GCAATAACCTCAGGAGCATC+TGG | + | chr4_1:65656264-65656283 | None:intergenic | 50.0% |
| AAGTACGGTCACAGATGGAG+GGG | + | chr4_1:65656401-65656420 | None:intergenic | 50.0% | |
| CAAGTACGGTCACAGATGGA+GGG | + | chr4_1:65656402-65656421 | None:intergenic | 50.0% | |
| TGGTCACTCAAAGCCCTCTA+TGG | - | chr4_1:65656423-65656442 | Msa0564890:CDS | 50.0% | |
| TCACTCAAAGCCCTCTATGG+AGG | - | chr4_1:65656426-65656445 | Msa0564890:CDS | 50.0% | |
| ! | GTTGTGAGTGCTGTTGTGAG+TGG | - | chr4_1:65656520-65656539 | Msa0564890:intron | 50.0% |
| TGTTGTGAGTGGCTTCGTTG+AGG | - | chr4_1:65656531-65656550 | Msa0564890:intron | 50.0% | |
| GTTGTGAGTGGCTTCGTTGA+GGG | - | chr4_1:65656532-65656551 | Msa0564890:intron | 50.0% | |
| TTGTGAGTGGCTTCGTTGAG+GGG | - | chr4_1:65656533-65656552 | Msa0564890:intron | 50.0% | |
| ATCCTGCTTGCAAGTGTCAC+CGG | - | chr4_1:65656569-65656588 | Msa0564890:CDS | 50.0% | |
| ! | CGGAGTGTTACTGCAGATTC+TGG | - | chr4_1:65656589-65656608 | Msa0564890:CDS | 50.0% |
| AAGGTGGAAAAGCCTGTTGC+CGG | - | chr4_1:65657032-65657051 | Msa0564890:intron | 50.0% | |
| TCAAAGAAACCACCGGCAAC+AGG | + | chr4_1:65657047-65657066 | None:intergenic | 50.0% | |
| GTTGCCGGTGGTTTCTTTGA+TGG | - | chr4_1:65657047-65657066 | Msa0564890:intron | 50.0% | |
| CCACCTCCATCCAATTCAGA+AGG | + | chr4_1:65657297-65657316 | None:intergenic | 50.0% | |
| CCTTCTGAATTGGATGGAGG+TGG | - | chr4_1:65657294-65657313 | Msa0564890:CDS | 50.0% | |
| TGCAGCACCTCATGTATCCT+TGG | - | chr4_1:65657350-65657369 | Msa0564890:intron | 50.0% | |
| GCACCTCATGTATCCTTGGA+TGG | - | chr4_1:65657354-65657373 | Msa0564890:intron | 50.0% | |
| CGACGACGATGATGATTCAC+AGG | - | chr4_1:65657533-65657552 | Msa0564890:CDS | 50.0% | |
| AACGAGGTGTGAAGCGTAGA+CGG | - | chr4_1:65657631-65657650 | Msa0564890:exon | 50.0% | |
| GTGTGAAGCGTAGACGGTTT+GGG | - | chr4_1:65657637-65657656 | Msa0564890:exon | 50.0% | |
| GAGTCAGGGTGGTTCGTATG+TGG | - | chr4_1:65655264-65655283 | Msa0564890:CDS | 55.0% | |
| ! | GTTGGGCTGTCATTGGTAGC+CGG | - | chr4_1:65655411-65655430 | Msa0564890:CDS | 55.0% |
| ! | GCTGTCATTGGTAGCCGGAT+TGG | - | chr4_1:65655416-65655435 | Msa0564890:CDS | 55.0% |
| ! | GAGAGGGAGTATGTGAGGGA+TGG | - | chr4_1:65655863-65655882 | Msa0564890:intron | 55.0% |
| CCAAGTACGGTCACAGATGG+AGG | + | chr4_1:65656403-65656422 | None:intergenic | 55.0% | |
| CCTCCATCTGTGACCGTACT+TGG | - | chr4_1:65656400-65656419 | Msa0564890:CDS | 55.0% | |
| CCACCAAGTACGGTCACAGA+TGG | + | chr4_1:65656406-65656425 | None:intergenic | 55.0% | |
| CCATCTGTGACCGTACTTGG+TGG | - | chr4_1:65656403-65656422 | Msa0564890:CDS | 55.0% | |
| CTCAAAGCCCTCTATGGAGG+AGG | - | chr4_1:65656429-65656448 | Msa0564890:CDS | 55.0% | |
| TGTGAGTGGCTTCGTTGAGG+GGG | - | chr4_1:65656534-65656553 | Msa0564890:intron | 55.0% | |
| !! | GATGGAGGTGGTGTTTTGGG+TGG | - | chr4_1:65657306-65657325 | Msa0564890:intron | 55.0% |
| !! | AGGTGGTGTTTTGGGTGGTG+TGG | - | chr4_1:65657311-65657330 | Msa0564890:intron | 55.0% |
| TTGGGTGGTGTGGATGCTTC+TGG | - | chr4_1:65657321-65657340 | Msa0564890:intron | 55.0% | |
| GGTGTGAAGCGTAGACGGTT+TGG | - | chr4_1:65657636-65657655 | Msa0564890:exon | 55.0% | |
| CAGGGTGGTTCGTATGTGGG+AGG | - | chr4_1:65655268-65655287 | Msa0564890:CDS | 60.0% | |
| GAAGAGATTGCGAGAGGGCG+AGG | - | chr4_1:65655525-65655544 | Msa0564890:CDS | 60.0% | |
| GCTTCGTTGAGGGGGAAGAG+TGG | - | chr4_1:65656542-65656561 | Msa0564890:intron | 60.0% | |
| CTCCGGTGACACTTGCAAGC+AGG | + | chr4_1:65656574-65656593 | None:intergenic | 60.0% | |
| GTGGAAAAGCCTGTTGCCGG+TGG | - | chr4_1:65657035-65657054 | Msa0564890:intron | 60.0% | |
| ! | GACGGGGGCTGAGCATCTTT+TGG | - | chr4_1:65657485-65657504 | Msa0564890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 65655181 | 65657662 | 65655181 | ID=Msa0564890;Name=Msa0564890 |
| chr4_1 | mRNA | 65655181 | 65657662 | 65655181 | ID=Msa0564890-mRNA-1;Parent=Msa0564890;Name=Msa0564890-mRNA-1;_AED=0.31;_eAED=0.31;_QI=22|0|0|1|0.88|0.8|10|0|571 |
| chr4_1 | exon | 65657491 | 65657662 | 65657491 | ID=Msa0564890-mRNA-1:exon:21206;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65657327 | 65657368 | 65657327 | ID=Msa0564890-mRNA-1:exon:21205;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65657101 | 65657317 | 65657101 | ID=Msa0564890-mRNA-1:exon:21204;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65656916 | 65657012 | 65656916 | ID=Msa0564890-mRNA-1:exon:21203;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65656713 | 65656834 | 65656713 | ID=Msa0564890-mRNA-1:exon:21202;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65656548 | 65656632 | 65656548 | ID=Msa0564890-mRNA-1:exon:21201;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65656181 | 65656468 | 65656181 | ID=Msa0564890-mRNA-1:exon:21200;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65655973 | 65656090 | 65655973 | ID=Msa0564890-mRNA-1:exon:21199;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65655689 | 65655874 | 65655689 | ID=Msa0564890-mRNA-1:exon:21198;Parent=Msa0564890-mRNA-1 |
| chr4_1 | exon | 65655181 | 65655588 | 65655181 | ID=Msa0564890-mRNA-1:exon:21197;Parent=Msa0564890-mRNA-1 |
| chr4_1 | five_prime_UTR | 65657641 | 65657662 | 65657641 | ID=Msa0564890-mRNA-1:five_prime_utr;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65657491 | 65657640 | 65657491 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65657327 | 65657368 | 65657327 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65657101 | 65657317 | 65657101 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65656916 | 65657012 | 65656916 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65656713 | 65656834 | 65656713 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65656548 | 65656632 | 65656548 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65656181 | 65656468 | 65656181 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65655973 | 65656090 | 65655973 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65655689 | 65655874 | 65655689 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| chr4_1 | CDS | 65655181 | 65655588 | 65655181 | ID=Msa0564890-mRNA-1:cds;Parent=Msa0564890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
