Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153910 | XP_024630604.2 | 69.484 | 213 | 27 | 2 | 11 | 185 | 34 | 246 | 6.41e-88 | 269 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153910 | sp|Q3ECH5|PP107_ARATH | 35.000 | 200 | 86 | 4 | 6 | 167 | 216 | 409 | 5.53e-22 | 96.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153910 | A0A396JM85 | 68.571 | 210 | 28 | 2 | 15 | 186 | 1 | 210 | 3.58e-83 | 259 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015400 | Msa0153910 | 0.816758 | 4.689438e-52 | -8.615850e-47 |
Msa0015750 | Msa0153910 | 0.829383 | 5.308932e-55 | -8.615850e-47 |
Msa0016570 | Msa0153910 | 0.855355 | 6.668818e-62 | -8.615850e-47 |
Msa0016580 | Msa0153910 | 0.843389 | 1.443699e-58 | -8.615850e-47 |
Msa0017070 | Msa0153910 | 0.803502 | 3.380973e-49 | -8.615850e-47 |
Msa0017510 | Msa0153910 | 0.825812 | 3.822436e-54 | -8.615850e-47 |
Msa0064970 | Msa0153910 | 0.800671 | 1.291925e-48 | -8.615850e-47 |
Msa0078590 | Msa0153910 | 0.813508 | 2.470319e-51 | -8.615850e-47 |
Msa0087140 | Msa0153910 | 0.812662 | 3.786642e-51 | -8.615850e-47 |
Msa0092630 | Msa0153910 | 0.802404 | 5.700204e-49 | -8.615850e-47 |
Msa0095970 | Msa0153910 | 0.805703 | 1.174448e-49 | -8.615850e-47 |
Msa0102070 | Msa0153910 | 0.838951 | 2.119802e-57 | -8.615850e-47 |
Msa0107580 | Msa0153910 | 0.870669 | 1.225226e-66 | -8.615850e-47 |
Msa0110270 | Msa0153910 | 0.831654 | 1.476739e-55 | -8.615850e-47 |
Msa0111510 | Msa0153910 | 0.853644 | 2.085827e-61 | -8.615850e-47 |
Msa0114060 | Msa0153910 | 0.801929 | 7.140278e-49 | -8.615850e-47 |
Msa0123810 | Msa0153910 | 0.819805 | 9.574479e-53 | -8.615850e-47 |
Msa0131770 | Msa0153910 | 0.823551 | 1.303354e-53 | -8.615850e-47 |
Msa0139060 | Msa0153910 | 0.801920 | 7.169936e-49 | -8.615850e-47 |
Msa0142220 | Msa0153910 | 0.856204 | 3.767653e-62 | -8.615850e-47 |
Msa0145750 | Msa0153910 | 0.809621 | 1.728890e-50 | -8.615850e-47 |
Msa0153910 | Msa0157290 | 0.826039 | 3.375761e-54 | -8.615850e-47 |
Msa0153910 | Msa0159720 | 0.809244 | 2.082306e-50 | -8.615850e-47 |
Msa0153910 | Msa0165190 | 0.808231 | 3.428407e-50 | -8.615850e-47 |
Msa0153910 | Msa0188460 | 0.815899 | 7.296319e-52 | -8.615850e-47 |
Msa0153910 | Msa0192970 | 0.809211 | 2.116339e-50 | -8.615850e-47 |
Msa0153910 | Msa0199240 | 0.801916 | 7.185217e-49 | -8.615850e-47 |
Msa0153910 | Msa0200000 | 0.806393 | 8.407962e-50 | -8.615850e-47 |
Msa0153910 | Msa0214300 | 0.813445 | 2.550065e-51 | -8.615850e-47 |
Msa0153910 | Msa0216290 | 0.800194 | 1.615628e-48 | -8.615850e-47 |
Msa0153910 | Msa0220740 | 0.800617 | 1.325357e-48 | -8.615850e-47 |
Msa0153910 | Msa0222890 | 0.804689 | 1.914426e-49 | -8.615850e-47 |
Msa0153910 | Msa0227480 | 0.834044 | 3.762144e-56 | -8.615850e-47 |
Msa0153910 | Msa0231000 | 0.829796 | 4.213326e-55 | -8.615850e-47 |
Msa0153910 | Msa0232850 | 0.851615 | 7.905963e-61 | -8.615850e-47 |
Msa0153910 | Msa0233080 | 0.805259 | 1.455307e-49 | -8.615850e-47 |
Msa0153910 | Msa0233300 | 0.828127 | 1.068508e-54 | -8.615850e-47 |
Msa0153910 | Msa0235140 | 0.840871 | 6.697002e-58 | -8.615850e-47 |
Msa0153910 | Msa0243890 | 0.808023 | 3.796886e-50 | -8.615850e-47 |
Msa0153910 | Msa0251640 | 0.804849 | 1.773293e-49 | -8.615850e-47 |
Msa0153910 | Msa0267000 | 0.837512 | 4.975544e-57 | -8.615850e-47 |
Msa0153910 | Msa0267010 | 0.847895 | 8.654319e-60 | -8.615850e-47 |
Msa0153910 | Msa0270520 | 0.853371 | 2.497117e-61 | -8.615850e-47 |
Msa0153910 | Msa0273100 | 0.820164 | 7.928292e-53 | -8.615850e-47 |
Msa0153910 | Msa0294030 | 0.816598 | 5.091529e-52 | -8.615850e-47 |
Msa0153910 | Msa0295770 | 0.801443 | 8.982986e-49 | -8.615850e-47 |
Msa0153910 | Msa0300570 | 0.818695 | 1.714328e-52 | -8.615850e-47 |
Msa0153910 | Msa0304170 | 0.834544 | 2.818490e-56 | -8.615850e-47 |
Msa0153910 | Msa0306460 | 0.823307 | 1.486319e-53 | -8.615850e-47 |
Msa0153910 | Msa0309020 | 0.845446 | 4.040085e-59 | -8.615850e-47 |
Msa0153910 | Msa0313760 | 0.839034 | 2.016611e-57 | -8.615850e-47 |
Msa0153910 | Msa0326200 | 0.863398 | 2.562214e-64 | -8.615850e-47 |
Msa0153910 | Msa0329190 | 0.805523 | 1.281260e-49 | -8.615850e-47 |
Msa0153910 | Msa0337900 | 0.820633 | 6.186348e-53 | -8.615850e-47 |
Msa0153910 | Msa0340470 | 0.810164 | 1.320921e-50 | -8.615850e-47 |
Msa0153910 | Msa0342240 | 0.849698 | 2.736849e-60 | -8.615850e-47 |
Msa0153910 | Msa0344910 | 0.828837 | 7.198342e-55 | -8.615850e-47 |
Msa0153910 | Msa0344980 | 0.836862 | 7.297061e-57 | -8.615850e-47 |
Msa0153910 | Msa0353190 | 0.839172 | 1.857873e-57 | -8.615850e-47 |
Msa0153910 | Msa0355220 | 0.827407 | 1.591348e-54 | -8.615850e-47 |
Msa0153910 | Msa0357340 | 0.822255 | 2.611978e-53 | -8.615850e-47 |
Msa0153910 | Msa0360510 | 0.829936 | 3.894250e-55 | -8.615850e-47 |
Msa0153910 | Msa0362420 | 0.811468 | 6.897103e-51 | -8.615850e-47 |
Msa0153910 | Msa0363300 | 0.809772 | 1.604382e-50 | -8.615850e-47 |
Msa0153910 | Msa0365500 | 0.815197 | 1.045857e-51 | -8.615850e-47 |
Msa0153910 | Msa0371730 | 0.827527 | 1.489185e-54 | -8.615850e-47 |
Msa0153910 | Msa0384800 | 0.846535 | 2.043569e-59 | -8.615850e-47 |
Msa0153910 | Msa0394970 | 0.809750 | 1.621815e-50 | -8.615850e-47 |
Msa0153910 | Msa0397750 | 0.818396 | 2.003630e-52 | -8.615850e-47 |
Msa0153910 | Msa0402290 | 0.835267 | 1.853155e-56 | -8.615850e-47 |
Msa0153910 | Msa0406120 | 0.830466 | 2.891359e-55 | -8.615850e-47 |
Msa0153910 | Msa0407750 | 0.802441 | 5.601385e-49 | -8.615850e-47 |
Msa0153910 | Msa0414230 | 0.800814 | 1.208180e-48 | -8.615850e-47 |
Msa0153910 | Msa0414410 | 0.853502 | 2.290448e-61 | -8.615850e-47 |
Msa0153910 | Msa0414420 | 0.858669 | 7.030965e-63 | -8.615850e-47 |
Msa0153910 | Msa0416650 | 0.815569 | 8.644733e-52 | -8.615850e-47 |
Msa0153910 | Msa0417080 | 0.824451 | 8.012929e-54 | -8.615850e-47 |
Msa0153910 | Msa0417090 | 0.808886 | 2.484889e-50 | -8.615850e-47 |
Msa0153910 | Msa0417100 | 0.814707 | 1.343264e-51 | -8.615850e-47 |
Msa0153910 | Msa0429880 | 0.820811 | 5.632434e-53 | -8.615850e-47 |
Msa0153910 | Msa0430420 | 0.803470 | 3.433240e-49 | -8.615850e-47 |
Msa0153910 | Msa0431690 | 0.831148 | 1.967530e-55 | -8.615850e-47 |
Msa0153910 | Msa0432290 | 0.823962 | 1.044352e-53 | -8.615850e-47 |
Msa0153910 | Msa0435230 | 0.804763 | 1.847685e-49 | -8.615850e-47 |
Msa0153910 | Msa0436780 | 0.846295 | 2.376257e-59 | -8.615850e-47 |
Msa0153910 | Msa0436800 | 0.816956 | 4.233421e-52 | -8.615850e-47 |
Msa0153910 | Msa0437990 | 0.845602 | 3.665872e-59 | -8.615850e-47 |
Msa0153910 | Msa0438620 | 0.807632 | 4.598421e-50 | -8.615850e-47 |
Msa0153910 | Msa0444130 | 0.850294 | 1.863429e-60 | -8.615850e-47 |
Msa0153910 | Msa0445780 | 0.827300 | 1.688142e-54 | -8.615850e-47 |
Msa0153910 | Msa0450000 | 0.824426 | 8.124654e-54 | -8.615850e-47 |
Msa0153910 | Msa0452620 | 0.804443 | 2.155412e-49 | -8.615850e-47 |
Msa0153910 | Msa0452900 | 0.866329 | 3.088599e-65 | -8.615850e-47 |
Msa0153910 | Msa0453120 | 0.829186 | 5.927434e-55 | -8.615850e-47 |
Msa0153910 | Msa0454910 | 0.818426 | 1.972098e-52 | -8.615850e-47 |
Msa0153910 | Msa0456200 | 0.850595 | 1.534164e-60 | -8.615850e-47 |
Msa0153910 | Msa0458090 | 0.834017 | 3.822835e-56 | -8.615850e-47 |
Msa0153910 | Msa0459160 | 0.829174 | 5.965474e-55 | -8.615850e-47 |
Msa0153910 | Msa0466120 | 0.819399 | 1.185635e-52 | -8.615850e-47 |
Msa0153910 | Msa0482620 | 0.843724 | 1.174794e-58 | -8.615850e-47 |
Msa0153910 | Msa0491590 | 0.816781 | 4.634075e-52 | -8.615850e-47 |
Msa0153910 | Msa0493000 | 0.812161 | 4.873856e-51 | -8.615850e-47 |
Msa0153910 | Msa0502340 | 0.804067 | 2.580949e-49 | -8.615850e-47 |
Msa0153910 | Msa0505080 | 0.805771 | 1.136229e-49 | -8.615850e-47 |
Msa0153910 | Msa0506270 | 0.816087 | 6.624860e-52 | -8.615850e-47 |
Msa0153910 | Msa0512900 | 0.803796 | 2.937547e-49 | -8.615850e-47 |
Msa0153910 | Msa0513490 | 0.806840 | 6.764494e-50 | -8.615850e-47 |
Msa0153910 | Msa0518540 | 0.806411 | 8.333486e-50 | -8.615850e-47 |
Msa0153910 | Msa0529040 | 0.800868 | 1.177591e-48 | -8.615850e-47 |
Msa0153910 | Msa0534540 | 0.805965 | 1.034494e-49 | -8.615850e-47 |
Msa0153910 | Msa0542450 | 0.817081 | 3.968341e-52 | -8.615850e-47 |
Msa0153910 | Msa0545210 | 0.800078 | 1.706345e-48 | -8.615850e-47 |
Msa0153910 | Msa0563800 | 0.807679 | 4.491946e-50 | -8.615850e-47 |
Msa0153910 | Msa0564510 | 0.801556 | 8.517439e-49 | -8.615850e-47 |
Msa0153910 | Msa0564890 | 0.865125 | 7.407147e-65 | -8.615850e-47 |
Msa0153910 | Msa0585610 | 0.821250 | 4.460704e-53 | -8.615850e-47 |
Msa0153910 | Msa0589780 | 0.810388 | 1.181831e-50 | -8.615850e-47 |
Msa0153910 | Msa0592680 | 0.823980 | 1.034223e-53 | -8.615850e-47 |
Msa0153910 | Msa0598780 | 0.815858 | 7.451126e-52 | -8.615850e-47 |
Msa0153910 | Msa0600700 | 0.816409 | 5.612938e-52 | -8.615850e-47 |
Msa0153910 | Msa0604350 | 0.804434 | 2.164610e-49 | -8.615850e-47 |
Msa0153910 | Msa0612930 | 0.801844 | 7.431553e-49 | -8.615850e-47 |
Msa0153910 | Msa0618450 | 0.813164 | 2.940180e-51 | -8.615850e-47 |
Msa0153910 | Msa0627410 | 0.850085 | 2.133168e-60 | -8.615850e-47 |
Msa0153910 | Msa0636170 | 0.834152 | 3.535042e-56 | -8.615850e-47 |
Msa0153910 | Msa0650630 | 0.810070 | 1.383563e-50 | -8.615850e-47 |
Msa0153910 | Msa0657970 | 0.820759 | 5.788402e-53 | -8.615850e-47 |
Msa0153910 | Msa0661650 | 0.812691 | 3.732416e-51 | -8.615850e-47 |
Msa0153910 | Msa0661870 | 0.824544 | 7.621869e-54 | -8.615850e-47 |
Msa0153910 | Msa0668260 | 0.813901 | 2.023696e-51 | -8.615850e-47 |
Msa0153910 | Msa0669320 | 0.804604 | 1.994543e-49 | -8.615850e-47 |
Msa0153910 | Msa0673450 | 0.824129 | 9.542081e-54 | -8.615850e-47 |
Msa0153910 | Msa0678930 | 0.884607 | 1.659735e-71 | -8.615850e-47 |
Msa0153910 | Msa0681250 | 0.800866 | 1.178884e-48 | -8.615850e-47 |
Msa0153910 | Msa0681270 | 0.811077 | 8.383549e-51 | -8.615850e-47 |
Msa0153910 | Msa0688270 | 0.823415 | 1.402072e-53 | -8.615850e-47 |
Msa0153910 | Msa0694370 | 0.825105 | 5.618330e-54 | -8.615850e-47 |
Msa0153910 | Msa0697060 | 0.820550 | 6.466457e-53 | -8.615850e-47 |
Msa0153910 | Msa0703120 | 0.812905 | 3.351004e-51 | -8.615850e-47 |
Msa0153910 | Msa0726140 | 0.864171 | 1.472932e-64 | -8.615850e-47 |
Msa0153910 | Msa0729800 | 0.807283 | 5.451761e-50 | -8.615850e-47 |
Msa0153910 | Msa0731550 | 0.821364 | 4.199779e-53 | -8.615850e-47 |
Msa0153910 | Msa0731560 | 0.803212 | 3.882391e-49 | -8.615850e-47 |
Msa0153910 | Msa0731940 | 0.805110 | 1.563516e-49 | -8.615850e-47 |
Msa0153910 | Msa0732310 | 0.800742 | 1.249314e-48 | -8.615850e-47 |
Msa0153910 | Msa0732710 | 0.807240 | 5.567586e-50 | -8.615850e-47 |
Msa0153910 | Msa0733290 | 0.820964 | 5.191302e-53 | -8.615850e-47 |
Msa0153910 | Msa0735170 | 0.828741 | 7.593448e-55 | -8.615850e-47 |
Msa0153910 | Msa0736000 | 0.811106 | 8.265666e-51 | -8.615850e-47 |
Msa0153910 | Msa0736200 | 0.800190 | 1.618828e-48 | -8.615850e-47 |
Msa0153910 | Msa0736210 | 0.827004 | 1.987679e-54 | -8.615850e-47 |
Msa0153910 | Msa0741570 | 0.804526 | 2.071220e-49 | -8.615850e-47 |
Msa0153910 | Msa0741990 | 0.843294 | 1.530847e-58 | -8.615850e-47 |
Msa0153910 | Msa0743720 | 0.815624 | 8.401845e-52 | -8.615850e-47 |
Msa0153910 | Msa0743810 | 0.867858 | 1.003621e-65 | -8.615850e-47 |
Msa0153910 | Msa0745060 | 0.854625 | 1.086423e-61 | -8.615850e-47 |
Msa0153910 | Msa0762360 | 0.802301 | 5.985974e-49 | -8.615850e-47 |
Msa0153910 | Msa0766630 | 0.865230 | 6.864260e-65 | -8.615850e-47 |
Msa0153910 | Msa0767170 | 0.827209 | 1.774718e-54 | -8.615850e-47 |
Msa0153910 | Msa0767720 | 0.856775 | 2.561058e-62 | -8.615850e-47 |
Msa0153910 | Msa0768370 | 0.800133 | 1.662391e-48 | -8.615850e-47 |
Msa0153910 | Msa0777790 | 0.826416 | 2.745815e-54 | -8.615850e-47 |
Msa0153910 | Msa0777850 | 0.813435 | 2.563437e-51 | -8.615850e-47 |
Msa0153910 | Msa0777870 | 0.803477 | 3.422255e-49 | -8.615850e-47 |
Msa0153910 | Msa0783160 | 0.872234 | 3.720624e-67 | -8.615850e-47 |
Msa0153910 | Msa0787600 | 0.827015 | 1.975877e-54 | -8.615850e-47 |
Msa0153910 | Msa0789250 | 0.827165 | 1.818674e-54 | -8.615850e-47 |
Msa0153910 | Msa0793640 | 0.808863 | 2.512546e-50 | -8.615850e-47 |
Msa0153910 | Msa0802830 | 0.811161 | 8.040654e-51 | -8.615850e-47 |
Msa0153910 | Msa0804210 | 0.805483 | 1.306355e-49 | -8.615850e-47 |
Msa0153910 | Msa0806090 | 0.845788 | 3.263410e-59 | -8.615850e-47 |
Msa0153910 | Msa0808010 | 0.820918 | 5.321161e-53 | -8.615850e-47 |
Msa0153910 | Msa0808020 | 0.815080 | 1.110149e-51 | -8.615850e-47 |
Msa0153910 | Msa0810220 | 0.810490 | 1.123343e-50 | -8.615850e-47 |
Msa0153910 | Msa0811080 | 0.839768 | 1.300637e-57 | -8.615850e-47 |
Msa0153910 | Msa0822650 | 0.811052 | 8.491119e-51 | -8.615850e-47 |
Msa0153910 | Msa0825860 | 0.862627 | 4.433325e-64 | -8.615850e-47 |
Msa0153910 | Msa0833290 | 0.861479 | 9.966841e-64 | -8.615850e-47 |
Msa0153910 | Msa0840740 | 0.830346 | 3.093656e-55 | -8.615850e-47 |
Msa0153910 | Msa0843260 | 0.813996 | 1.928462e-51 | -8.615850e-47 |
Msa0153910 | Msa0846210 | 0.808398 | 3.158753e-50 | -8.615850e-47 |
Msa0153910 | Msa0846330 | 0.828754 | 7.541522e-55 | -8.615850e-47 |
Msa0153910 | Msa0846350 | 0.841444 | 4.734048e-58 | -8.615850e-47 |
Msa0153910 | Msa0848060 | 0.805436 | 1.335878e-49 | -8.615850e-47 |
Msa0153910 | Msa0854980 | 0.817930 | 2.554362e-52 | -8.615850e-47 |
Msa0153910 | Msa0857680 | 0.813213 | 2.868299e-51 | -8.615850e-47 |
Msa0153910 | Msa0857810 | 0.821572 | 3.759349e-53 | -8.615850e-47 |
Msa0153910 | Msa0865320 | 0.842311 | 2.794823e-58 | -8.615850e-47 |
Msa0153910 | Msa0872230 | 0.846086 | 2.709290e-59 | -8.615850e-47 |
Msa0153910 | Msa0880140 | 0.821514 | 3.877572e-53 | -8.615850e-47 |
Msa0153910 | Msa0884150 | 0.838037 | 3.647483e-57 | -8.615850e-47 |
Msa0153910 | Msa0885270 | 0.806204 | 9.216212e-50 | -8.615850e-47 |
Msa0153910 | Msa0885280 | 0.879361 | 1.326496e-69 | -8.615850e-47 |
Msa0153910 | Msa0885290 | 0.884467 | 1.870950e-71 | -8.615850e-47 |
Msa0153910 | Msa0887990 | 0.804220 | 2.398642e-49 | -8.615850e-47 |
Msa0153910 | Msa0888370 | 0.813063 | 3.094197e-51 | -8.615850e-47 |
Msa0153910 | Msa0897880 | 0.821678 | 3.553516e-53 | -8.615850e-47 |
Msa0153910 | Msa0898380 | 0.800550 | 1.367506e-48 | -8.615850e-47 |
Msa0153910 | Msa0907070 | 0.818545 | 1.853492e-52 | -8.615850e-47 |
Msa0153910 | Msa0907260 | 0.854344 | 1.310653e-61 | -8.615850e-47 |
Msa0153910 | Msa0909120 | 0.810674 | 1.024729e-50 | -8.615850e-47 |
Msa0153910 | Msa0909140 | 0.815884 | 7.354779e-52 | -8.615850e-47 |
Msa0153910 | Msa0918220 | 0.814185 | 1.752497e-51 | -8.615850e-47 |
Msa0153910 | Msa0918700 | 0.805018 | 1.634708e-49 | -8.615850e-47 |
Msa0153910 | Msa0922720 | 0.808078 | 3.695430e-50 | -8.615850e-47 |
Msa0153910 | Msa0925810 | 0.803431 | 3.497113e-49 | -8.615850e-47 |
Msa0153910 | Msa0927290 | 0.805014 | 1.637773e-49 | -8.615850e-47 |
Msa0153910 | Msa0927380 | 0.802600 | 5.195290e-49 | -8.615850e-47 |
Msa0153910 | Msa0933100 | 0.802850 | 4.613690e-49 | -8.615850e-47 |
Msa0153910 | Msa0935910 | 0.846973 | 1.550720e-59 | -8.615850e-47 |
Msa0153910 | Msa0942200 | 0.815866 | 7.421068e-52 | -8.615850e-47 |
Msa0153910 | Msa0947660 | 0.809564 | 1.777738e-50 | -8.615850e-47 |
Msa0153910 | Msa0954910 | 0.869849 | 2.273801e-66 | -8.615850e-47 |
Msa0153910 | Msa0956270 | 0.861632 | 8.953908e-64 | -8.615850e-47 |
Msa0153910 | Msa0957680 | 0.815849 | 7.487611e-52 | -8.615850e-47 |
Msa0153910 | Msa0959770 | 0.816893 | 4.371885e-52 | -8.615850e-47 |
Msa0153910 | Msa0964220 | 0.813713 | 2.226361e-51 | -8.615850e-47 |
Msa0153910 | Msa0969520 | 0.809250 | 2.075959e-50 | -8.615850e-47 |
Msa0153910 | Msa0975220 | 0.813037 | 3.134239e-51 | -8.615850e-47 |
Msa0153910 | Msa0976670 | 0.811666 | 6.245250e-51 | -8.615850e-47 |
Msa0153910 | Msa0981270 | 0.806524 | 7.888414e-50 | -8.615850e-47 |
Msa0153910 | Msa0981370 | 0.843826 | 1.103719e-58 | -8.615850e-47 |
Msa0153910 | Msa0983090 | 0.839054 | 1.992682e-57 | -8.615850e-47 |
Msa0153910 | Msa0986400 | 0.806021 | 1.006750e-49 | -8.615850e-47 |
Msa0153910 | Msa0989060 | 0.816824 | 4.530882e-52 | -8.615850e-47 |
Msa0153910 | Msa0991080 | 0.806429 | 8.261272e-50 | -8.615850e-47 |
Msa0153910 | Msa0993780 | 0.802708 | 4.933960e-49 | -8.615850e-47 |
Msa0153910 | Msa0998690 | 0.817754 | 2.798262e-52 | -8.615850e-47 |
Msa0153910 | Msa1000900 | 0.806818 | 6.838866e-50 | -8.615850e-47 |
Msa0153910 | Msa1014540 | 0.843376 | 1.455205e-58 | -8.615850e-47 |
Msa0153910 | Msa1014990 | 0.823601 | 1.268616e-53 | -8.615850e-47 |
Msa0153910 | Msa1016280 | 0.868559 | 5.968720e-66 | -8.615850e-47 |
Msa0153910 | Msa1024240 | 0.856343 | 3.430392e-62 | -8.615850e-47 |
Msa0153910 | Msa1024450 | 0.800237 | 1.583948e-48 | -8.615850e-47 |
Msa0153910 | Msa1025360 | 0.854743 | 1.004435e-61 | -8.615850e-47 |
Msa0153910 | Msa1025370 | 0.834550 | 2.808646e-56 | -8.615850e-47 |
Msa0153910 | Msa1044830 | 0.840180 | 1.015435e-57 | -8.615850e-47 |
Msa0153910 | Msa1044840 | 0.855412 | 6.418498e-62 | -8.615850e-47 |
Msa0153910 | Msa1052500 | 0.814904 | 1.214738e-51 | -8.615850e-47 |
Msa0153910 | Msa1060840 | 0.855835 | 4.830879e-62 | -8.615850e-47 |
Msa0153910 | Msa1065570 | 0.802356 | 5.833078e-49 | -8.615850e-47 |
Msa0153910 | Msa1075220 | -0.820037 | 8.475685e-53 | -8.615850e-47 |
Msa0153910 | Msa1075650 | 0.804608 | 1.990931e-49 | -8.615850e-47 |
Msa0153910 | Msa1077460 | 0.800210 | 1.604132e-48 | -8.615850e-47 |
Msa0153910 | Msa1079180 | 0.830853 | 2.323856e-55 | -8.615850e-47 |
Msa0153910 | Msa1082500 | 0.801209 | 1.003155e-48 | -8.615850e-47 |
Msa0153910 | Msa1092390 | 0.818117 | 2.317545e-52 | -8.615850e-47 |
Msa0153910 | Msa1092990 | 0.863139 | 3.080395e-64 | -8.615850e-47 |
Msa0153910 | Msa1096580 | 0.803920 | 2.768345e-49 | -8.615850e-47 |
Msa0153910 | Msa1099970 | 0.803058 | 4.178803e-49 | -8.615850e-47 |
Msa0153910 | Msa1100980 | 0.875800 | 2.315408e-68 | -8.615850e-47 |
Msa0153910 | Msa1109440 | 0.874495 | 6.461335e-68 | -8.615850e-47 |
Msa0153910 | Msa1116260 | 0.812186 | 4.812409e-51 | -8.615850e-47 |
Msa0153910 | Msa1121200 | 0.856605 | 2.872671e-62 | -8.615850e-47 |
Msa0153910 | Msa1123420 | 0.818952 | 1.498304e-52 | -8.615850e-47 |
Msa0153910 | Msa1135740 | 0.863591 | 2.232145e-64 | -8.615850e-47 |
Msa0153910 | Msa1136090 | 0.895483 | 9.185832e-76 | -8.615850e-47 |
Msa0153910 | Msa1137690 | 0.813770 | 2.163430e-51 | -8.615850e-47 |
Msa0153910 | Msa1146110 | 0.851756 | 7.212996e-61 | -8.615850e-47 |
Msa0153910 | Msa1148020 | 0.809857 | 1.537605e-50 | -8.615850e-47 |
Msa0153910 | Msa1149360 | 0.849182 | 3.811427e-60 | -8.615850e-47 |
Msa0153910 | Msa1150370 | 0.837901 | 3.953436e-57 | -8.615850e-47 |
Msa0153910 | Msa1160060 | 0.800796 | 1.218416e-48 | -8.615850e-47 |
Msa0153910 | Msa1160670 | 0.853515 | 2.270461e-61 | -8.615850e-47 |
Msa0153910 | Msa1162550 | -0.817933 | 2.550554e-52 | -8.615850e-47 |
Msa0153910 | Msa1169000 | 0.810466 | 1.136973e-50 | -8.615850e-47 |
Msa0153910 | Msa1173920 | 0.823168 | 1.601481e-53 | -8.615850e-47 |
Msa0153910 | Msa1176760 | 0.843222 | 1.600472e-58 | -8.615850e-47 |
Msa0153910 | Msa1178720 | 0.828988 | 6.617752e-55 | -8.615850e-47 |
Msa0153910 | Msa1182090 | 0.824578 | 7.481425e-54 | -8.615850e-47 |
Msa0153910 | Msa1184420 | 0.811680 | 6.201379e-51 | -8.615850e-47 |
Msa0153910 | Msa1187940 | 0.860332 | 2.224437e-63 | -8.615850e-47 |
Msa0153910 | Msa1187950 | 0.874081 | 8.923046e-68 | -8.615850e-47 |
Msa0153910 | Msa1192640 | 0.876450 | 1.383152e-68 | -8.615850e-47 |
Msa0153910 | Msa1193730 | 0.811724 | 6.065801e-51 | -8.615850e-47 |
Msa0153910 | Msa1226660 | 0.829607 | 4.683845e-55 | -8.615850e-47 |
Msa0153910 | Msa1228590 | 0.804827 | 1.791525e-49 | -8.615850e-47 |
Msa0153910 | Msa1230430 | 0.834161 | 3.516870e-56 | -8.615850e-47 |
Msa0153910 | Msa1244250 | 0.826617 | 2.458406e-54 | -8.615850e-47 |
Msa0153910 | Msa1246510 | 0.811686 | 6.184920e-51 | -8.615850e-47 |
Msa0153910 | Msa1249490 | 0.849841 | 2.496041e-60 | -8.615850e-47 |
Msa0153910 | Msa1253000 | 0.829447 | 5.120938e-55 | -8.615850e-47 |
Msa0153910 | Msa1260100 | 0.827262 | 1.724002e-54 | -8.615850e-47 |
Msa0153910 | Msa1269670 | 0.851596 | 8.006013e-61 | -8.615850e-47 |
Msa0153910 | Msa1270230 | 0.849849 | 2.483685e-60 | -8.615850e-47 |
Msa0153910 | Msa1270240 | 0.830988 | 2.152803e-55 | -8.615850e-47 |
Msa0153910 | Msa1270270 | 0.832835 | 7.534530e-56 | -8.615850e-47 |
Msa0153910 | Msa1273230 | 0.845500 | 3.906483e-59 | -8.615850e-47 |
Msa0153910 | Msa1283330 | 0.857558 | 1.503932e-62 | -8.615850e-47 |
Msa0153910 | Msa1283860 | 0.815611 | 8.459283e-52 | -8.615850e-47 |
Msa0153910 | Msa1284680 | 0.833577 | 4.922482e-56 | -8.615850e-47 |
Msa0153910 | Msa1285930 | 0.895278 | 1.115670e-75 | -8.615850e-47 |
Msa0153910 | Msa1286760 | 0.808988 | 2.363267e-50 | -8.615850e-47 |
Msa0153910 | Msa1287800 | 0.853836 | 1.836080e-61 | -8.615850e-47 |
Msa0153910 | Msa1287810 | 0.866174 | 3.456288e-65 | -8.615850e-47 |
Msa0153910 | Msa1287820 | 0.812262 | 4.632136e-51 | -8.615850e-47 |
Msa0153910 | Msa1287830 | 0.815333 | 9.752842e-52 | -8.615850e-47 |
Msa0153910 | Msa1289430 | 0.825066 | 5.738991e-54 | -8.615850e-47 |
Msa0153910 | Msa1297210 | 0.855240 | 7.206424e-62 | -8.615850e-47 |
Msa0153910 | Msa1307890 | 0.824701 | 6.997476e-54 | -8.615850e-47 |
Msa0153910 | Msa1307980 | 0.821982 | 3.021975e-53 | -8.615850e-47 |
Msa0153910 | Msa1310120 | 0.831909 | 1.277761e-55 | -8.615850e-47 |
Msa0153910 | Msa1320300 | 0.812192 | 4.797887e-51 | -8.615850e-47 |
Msa0153910 | Msa1322890 | 0.805884 | 1.075870e-49 | -8.615850e-47 |
Msa0153910 | Msa1324780 | 0.825324 | 4.988669e-54 | -8.615850e-47 |
Msa0153910 | Msa1327680 | 0.800585 | 1.345405e-48 | -8.615850e-47 |
Msa0153910 | Msa1336670 | 0.801160 | 1.026689e-48 | -8.615850e-47 |
Msa0153910 | Msa1340590 | 0.811613 | 6.412565e-51 | -8.615850e-47 |
Msa0153910 | Msa1342200 | 0.805540 | 1.270440e-49 | -8.615850e-47 |
Msa0153910 | Msa1342840 | 0.846118 | 2.655246e-59 | -8.615850e-47 |
Msa0153910 | Msa1359040 | 0.802799 | 4.727079e-49 | -8.615850e-47 |
Msa0153910 | Msa1360610 | 0.800067 | 1.714858e-48 | -8.615850e-47 |
Msa0153910 | Msa1366810 | 0.800573 | 1.352642e-48 | -8.615850e-47 |
Msa0153910 | Msa1369430 | 0.808662 | 2.773545e-50 | -8.615850e-47 |
Msa0153910 | Msa1372760 | 0.800923 | 1.147686e-48 | -8.615850e-47 |
Msa0153910 | Msa1381530 | 0.803156 | 3.988285e-49 | -8.615850e-47 |
Msa0153910 | Msa1382690 | 0.813310 | 2.730279e-51 | -8.615850e-47 |
Msa0153910 | Msa1382700 | 0.823022 | 1.731943e-53 | -8.615850e-47 |
Msa0153910 | Msa1397150 | 0.802653 | 5.065614e-49 | -8.615850e-47 |
Msa0153910 | Msa1397580 | 0.806021 | 1.006761e-49 | -8.615850e-47 |
Msa0153910 | Msa1397860 | 0.821699 | 3.513850e-53 | -8.615850e-47 |
Msa0153910 | Msa1402790 | 0.825172 | 5.418620e-54 | -8.615850e-47 |
Msa0153910 | Msa1404000 | 0.843536 | 1.318988e-58 | -8.615850e-47 |
Msa0153910 | Msa1404020 | 0.813030 | 3.145070e-51 | -8.615850e-47 |
Msa0153910 | Msa1408780 | 0.822903 | 1.846131e-53 | -8.615850e-47 |
Msa0153910 | Msa1411020 | 0.802739 | 4.862793e-49 | -8.615850e-47 |
Msa0153910 | Msa1415310 | 0.810988 | 8.764467e-51 | -8.615850e-47 |
Msa0153910 | Msa1422180 | 0.848195 | 7.153248e-60 | -8.615850e-47 |
Msa0153910 | Msa1424290 | 0.803236 | 3.838087e-49 | -8.615850e-47 |
Msa0153910 | Msa1433120 | 0.863014 | 3.368258e-64 | -8.615850e-47 |
Msa0153910 | Msa1434350 | 0.803625 | 3.187912e-49 | -8.615850e-47 |
Msa0153910 | Msa1438250 | 0.852676 | 3.949596e-61 | -8.615850e-47 |
Msa0153910 | Msa1439320 | 0.803187 | 3.930114e-49 | -8.615850e-47 |
Msa0153910 | Msa1451570 | 0.840872 | 6.691640e-58 | -8.615850e-47 |
Msa0153910 | Msa1451620 | -0.801927 | 7.145220e-49 | -8.615850e-47 |
Msa0153910 | Msa1452240 | 0.807683 | 4.483253e-50 | -8.615850e-47 |
Msa0153910 | Msa1453720 | 0.812459 | 4.195582e-51 | -8.615850e-47 |
Msa0153910 | Msa1466540 | 0.814817 | 1.269659e-51 | -8.615850e-47 |
Msa0153910 | Msa1467020 | 0.816541 | 5.242952e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153910 | MtrunA17_Chr1g0164031 | 68.571 | 210 | 28 | 2 | 15 | 186 | 1 | 210 | 6.90e-87 | 259 |
Msa0153910 | MtrunA17_Chr1g0164131 | 66.816 | 223 | 35 | 3 | 2 | 185 | 204 | 426 | 1.30e-84 | 260 |
Msa0153910 | MtrunA17_Chr1g0163811 | 55.251 | 219 | 57 | 3 | 8 | 185 | 2 | 220 | 8.82e-58 | 183 |
Msa0153910 | MtrunA17_Chr1g0164951 | 64.773 | 88 | 29 | 2 | 99 | 185 | 14 | 100 | 2.54e-29 | 105 |
Msa0153910 | MtrunA17_Chr6g0473331 | 24.880 | 209 | 134 | 7 | 4 | 205 | 285 | 477 | 1.00e-14 | 72.0 |
Msa0153910 | MtrunA17_Chr6g0478011 | 28.877 | 187 | 120 | 5 | 4 | 185 | 66 | 244 | 2.16e-14 | 70.5 |
Msa0153910 | MtrunA17_Chr1g0159521 | 27.168 | 173 | 119 | 3 | 15 | 185 | 266 | 433 | 2.24e-13 | 68.2 |
Msa0153910 | MtrunA17_Chr6g0479541 | 25.654 | 191 | 129 | 4 | 11 | 199 | 352 | 531 | 3.54e-13 | 67.8 |
Msa0153910 | MtrunA17_Chr6g0478291 | 28.877 | 187 | 120 | 6 | 4 | 185 | 254 | 432 | 9.36e-13 | 66.2 |
Msa0153910 | MtrunA17_Chr4g0037841 | 26.994 | 163 | 113 | 4 | 3 | 162 | 179 | 338 | 2.34e-12 | 65.1 |
Msa0153910 | MtrunA17_Chr6g0482921 | 28.409 | 176 | 113 | 5 | 15 | 185 | 1 | 168 | 7.25e-12 | 63.2 |
Msa0153910 | MtrunA17_Chr5g0395201 | 27.000 | 200 | 131 | 5 | 3 | 199 | 630 | 817 | 1.38e-11 | 63.2 |
Msa0153910 | MtrunA17_Chr6g0482971 | 26.136 | 176 | 117 | 5 | 15 | 185 | 255 | 422 | 2.58e-11 | 62.0 |
Msa0153910 | MtrunA17_Chr4g0060341 | 26.380 | 163 | 114 | 4 | 3 | 162 | 179 | 338 | 5.45e-11 | 61.2 |
Msa0153910 | MtrunA17_Chr6g0472611 | 23.370 | 184 | 134 | 4 | 4 | 185 | 253 | 431 | 8.81e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153910 | AT1G66345.1 | 35.000 | 200 | 86 | 4 | 6 | 167 | 216 | 409 | 5.63e-23 | 96.3 |
Msa0153910 | AT1G12700.1 | 25.789 | 190 | 128 | 5 | 4 | 188 | 313 | 494 | 2.68e-12 | 65.5 |
Msa0153910 | AT1G12700.3 | 25.789 | 190 | 128 | 5 | 4 | 188 | 329 | 510 | 3.05e-12 | 65.5 |
Msa0153910 | AT1G12700.2 | 25.789 | 190 | 128 | 5 | 4 | 188 | 329 | 510 | 3.05e-12 | 65.5 |
Msa0153910 | AT1G62670.2 | 25.521 | 192 | 128 | 6 | 1 | 185 | 301 | 484 | 1.50e-11 | 63.2 |
Msa0153910 | AT1G62670.1 | 25.521 | 192 | 128 | 6 | 1 | 185 | 301 | 484 | 1.50e-11 | 63.2 |
Msa0153910 | AT1G62680.1 | 25.000 | 192 | 129 | 6 | 1 | 185 | 235 | 418 | 4.19e-11 | 62.0 |
Msa0153910 | AT1G62680.2 | 25.000 | 192 | 129 | 6 | 1 | 185 | 235 | 418 | 4.19e-11 | 62.0 |
Msa0153910 | AT1G63400.1 | 25.521 | 192 | 128 | 6 | 1 | 185 | 305 | 488 | 4.81e-11 | 61.6 |
Msa0153910 | AT1G09820.1 | 24.309 | 181 | 131 | 4 | 3 | 180 | 202 | 379 | 5.12e-11 | 61.6 |
Msa0153910 | AT5G55840.2 | 24.294 | 177 | 120 | 6 | 7 | 175 | 216 | 386 | 8.19e-11 | 61.2 |
Msa0153910 | AT5G55840.1 | 24.294 | 177 | 120 | 6 | 7 | 175 | 216 | 386 | 8.19e-11 | 61.2 |
Msa0153910 | AT5G55840.3 | 24.294 | 177 | 120 | 6 | 7 | 175 | 176 | 346 | 8.87e-11 | 61.2 |
Find 52 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAACTGTTTGGGAGGTTTA+TGG | 0.189347 | 1_4:-17936720 | Msa0153910:CDS |
CTGAGTGCTGGGTCTGTTCT+TGG | 0.230869 | 1_4:-17936172 | Msa0153910:CDS |
ACCCTAATGTTGCTACTTCC+AGG | 0.279802 | 1_4:-17936674 | Msa0153910:CDS |
ACAAAGGAATGTTGCTGCTT+TGG | 0.290301 | 1_4:-17936619 | Msa0153910:CDS |
TGATTGATGTTCTTTGTAAA+GGG | 0.322972 | 1_4:-17936647 | Msa0153910:CDS |
ATCGTTGGATACGCGAATTC+GGG | 0.323774 | 1_4:-17936232 | Msa0153910:CDS |
AAATGGAAAGGAAGAGGTTA+AGG | 0.338732 | 1_4:-17936282 | Msa0153910:CDS |
GTTCTTGGTTGTTTGTTGTC+TGG | 0.346211 | 1_4:-17936157 | Msa0153910:CDS |
TCTTCACCTTCGCAATGAAA+TGG | 0.354318 | 1_4:-17935769 | Msa0153910:CDS |
TATCGTTGGATACGCGAATT+CGG | 0.360381 | 1_4:-17936233 | Msa0153910:CDS |
TCCTGGAAGTAGCAACATTA+GGG | 0.375459 | 1_4:+17936673 | None:intergenic |
ATCCTGGAAGTAGCAACATT+AGG | 0.390279 | 1_4:+17936672 | None:intergenic |
ATGATTGATGTTCTTTGTAA+AGG | 0.400878 | 1_4:-17936648 | Msa0153910:CDS |
ATACGCGAATTCGGGTAGAT+TGG | 0.403618 | 1_4:-17936224 | Msa0153910:CDS |
GCGAAATTCACATTCGCCTT+CGG | 0.404406 | 1_4:-17936580 | Msa0153910:CDS |
TAATCGATTTGAAACTGTTT+GGG | 0.410254 | 1_4:-17936730 | Msa0153910:CDS |
GAATAATTTGATTGGTGATT+CGG | 0.431287 | 1_4:-17936460 | Msa0153910:CDS |
TCGGAAAAGGTGGGAGAAGA+AGG | 0.435449 | 1_4:-17936525 | Msa0153910:CDS |
TCGCAATGAAATGGGCTCAT+TGG | 0.445606 | 1_4:-17935760 | Msa0153910:CDS |
GTAATCGATTTGAAACTGTT+TGG | 0.446185 | 1_4:-17936731 | Msa0153910:CDS |
TGGTTGTTTGTTGTCTGGTA+AGG | 0.448767 | 1_4:-17936152 | Msa0153910:CDS |
CTTCACCTTCGCAATGAAAT+GGG | 0.450197 | 1_4:-17935768 | Msa0153910:CDS |
ACTGAGAAGCTCTGTGAGAA+TGG | 0.462296 | 1_4:-17936127 | Msa0153910:CDS |
TTCGAAGAAATGCTGAGTGC+TGG | 0.470839 | 1_4:-17936184 | Msa0153910:CDS |
AAGAACATCAATCATAATCC+TGG | 0.477516 | 1_4:+17936656 | None:intergenic |
CGGGTAGATTGGAACAGTGT+TGG | 0.490766 | 1_4:-17936213 | Msa0153910:CDS |
CGGAAAAGGTGGGAGAAGAA+GGG | 0.500437 | 1_4:-17936524 | Msa0153910:CDS |
GCTGCTTTGGATCAGATTGT+TGG | 0.501923 | 1_4:-17936606 | Msa0153910:CDS |
TCGAAGAAATGCTGAGTGCT+GGG | 0.503765 | 1_4:-17936183 | Msa0153910:CDS |
GACTTTGAGAATGTCGGAAA+AGG | 0.506660 | 1_4:-17936538 | Msa0153910:CDS |
GGTTGGATTGATGAGGGAAA+TGG | 0.509075 | 1_4:-17936299 | Msa0153910:CDS |
TTTGAGAATGTCGGAAAAGG+TGG | 0.511929 | 1_4:-17936535 | Msa0153910:CDS |
TTTGTAAAGGGTTATTACAA+AGG | 0.524362 | 1_4:-17936635 | Msa0153910:CDS |
TGAGAATGGAGAAGTGGAGA+AGG | 0.524457 | 1_4:-17936113 | Msa0153910:intron |
GGACGGATTGAAGAGGCGGT+TGG | 0.525456 | 1_4:-17936316 | Msa0153910:CDS |
AATGGAAAGGAAGAGGTTAA+GGG | 0.531064 | 1_4:-17936281 | Msa0153910:CDS |
AAGAGGCGGTTGGATTGATG+AGG | 0.531949 | 1_4:-17936306 | Msa0153910:CDS |
TTGTTGCAGAATAATTTGAT+TGG | 0.534815 | 1_4:-17936468 | Msa0153910:CDS |
TGAGGGAAATGGAAAGGAAG+AGG | 0.538258 | 1_4:-17936288 | Msa0153910:CDS |
GAGTATGACTTTGAGAATGT+CGG | 0.551100 | 1_4:-17936544 | Msa0153910:CDS |
ACTTATGAATGTGTTATCGT+TGG | 0.553017 | 1_4:-17936247 | Msa0153910:CDS |
AGAGGCGGTTGGATTGATGA+GGG | 0.561629 | 1_4:-17936305 | Msa0153910:CDS |
ATGAGCCCATTTCATTGCGA+AGG | 0.566850 | 1_4:+17935763 | None:intergenic |
GCTCTGTGAGAATGGAGAAG+TGG | 0.572425 | 1_4:-17936119 | Msa0153910:CDS |
GCAGGAGAGAAATGACGATA+GGG | 0.581553 | 1_4:-17935793 | Msa0153910:intron |
TCGATTTGAAACTGTTTGGG+AGG | 0.582784 | 1_4:-17936727 | Msa0153910:CDS |
GATTGATGAGGGAAATGGAA+AGG | 0.587569 | 1_4:-17936294 | Msa0153910:CDS |
TTGAGAATGTCGGAAAAGGT+GGG | 0.614514 | 1_4:-17936534 | Msa0153910:CDS |
TGAGACGGGACGGATTGAAG+AGG | 0.615733 | 1_4:-17936323 | Msa0153910:intron |
TGCAGGAGAGAAATGACGAT+AGG | 0.623392 | 1_4:-17935794 | Msa0153910:intron |
GACGGGACGGATTGAAGAGG+CGG | 0.629942 | 1_4:-17936320 | Msa0153910:CDS |
CTCAAATTAACAATAACCGA+AGG | 0.641699 | 1_4:+17936564 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAAGGATTATGAAAGTT+CGG | - | chr1_4:17936612-17936631 | Msa0153910:CDS | 20.0% |
!! | ATTTAAGGATTATGAAAGTT+CGG | - | chr1_4:17936612-17936631 | Msa0153910:CDS | 20.0% |
!!! | TAATCGATTTGAAACTGTTT+GGG | - | chr1_4:17935748-17935767 | Msa0153910:CDS | 25.0% |
! | ATGATTGATGTTCTTTGTAA+AGG | - | chr1_4:17935830-17935849 | Msa0153910:intron | 25.0% |
! | TGATTGATGTTCTTTGTAAA+GGG | - | chr1_4:17935831-17935850 | Msa0153910:intron | 25.0% |
! | TTTGTAAAGGGTTATTACAA+AGG | - | chr1_4:17935843-17935862 | Msa0153910:intron | 25.0% |
! | TTGTTGCAGAATAATTTGAT+TGG | - | chr1_4:17936010-17936029 | Msa0153910:intron | 25.0% |
!! | GAATAATTTGATTGGTGATT+CGG | - | chr1_4:17936018-17936037 | Msa0153910:intron | 25.0% |
! | TGATTGTTCATGTTAAAGTT+AGG | - | chr1_4:17936053-17936072 | Msa0153910:intron | 25.0% |
! | TTCATGTTAAAGTTAGGTTA+GGG | - | chr1_4:17936059-17936078 | Msa0153910:intron | 25.0% |
!!! | ATTCGTTTATTTTTGTGAGA+CGG | - | chr1_4:17936140-17936159 | Msa0153910:CDS | 25.0% |
! | ACTTATTCACATTTGATACA+TGG | - | chr1_4:17936443-17936462 | Msa0153910:CDS | 25.0% |
!!! | TAATCGATTTGAAACTGTTT+GGG | - | chr1_4:17935748-17935767 | Msa0153910:CDS | 25.0% |
! | ATGATTGATGTTCTTTGTAA+AGG | - | chr1_4:17935830-17935849 | Msa0153910:intron | 25.0% |
! | TGATTGATGTTCTTTGTAAA+GGG | - | chr1_4:17935831-17935850 | Msa0153910:intron | 25.0% |
! | TTTGTAAAGGGTTATTACAA+AGG | - | chr1_4:17935843-17935862 | Msa0153910:intron | 25.0% |
! | TTGTTGCAGAATAATTTGAT+TGG | - | chr1_4:17936010-17936029 | Msa0153910:intron | 25.0% |
!! | GAATAATTTGATTGGTGATT+CGG | - | chr1_4:17936018-17936037 | Msa0153910:intron | 25.0% |
! | TGATTGTTCATGTTAAAGTT+AGG | - | chr1_4:17936053-17936072 | Msa0153910:intron | 25.0% |
! | TTCATGTTAAAGTTAGGTTA+GGG | - | chr1_4:17936059-17936078 | Msa0153910:intron | 25.0% |
!!! | ATTCGTTTATTTTTGTGAGA+CGG | - | chr1_4:17936140-17936159 | Msa0153910:CDS | 25.0% |
! | ACTTATTCACATTTGATACA+TGG | - | chr1_4:17936443-17936462 | Msa0153910:CDS | 25.0% |
!! | GTAATCGATTTGAAACTGTT+TGG | - | chr1_4:17935747-17935766 | Msa0153910:CDS | 30.0% |
AAGAACATCAATCATAATCC+TGG | + | chr1_4:17935825-17935844 | None:intergenic | 30.0% | |
CTCAAATTAACAATAACCGA+AGG | + | chr1_4:17935917-17935936 | None:intergenic | 30.0% | |
GTTCATGTTAAAGTTAGGTT+AGG | - | chr1_4:17936058-17936077 | Msa0153910:intron | 30.0% | |
TCATGTTAAAGTTAGGTTAG+GGG | - | chr1_4:17936060-17936079 | Msa0153910:intron | 30.0% | |
!!! | TTCGTTTATTTTTGTGAGAC+GGG | - | chr1_4:17936141-17936160 | Msa0153910:CDS | 30.0% |
ACTTATGAATGTGTTATCGT+TGG | - | chr1_4:17936231-17936250 | Msa0153910:CDS | 30.0% | |
ATCCTTTATCTAACAACACA+GGG | + | chr1_4:17936405-17936424 | None:intergenic | 30.0% | |
AATCCTTTATCTAACAACAC+AGG | + | chr1_4:17936406-17936425 | None:intergenic | 30.0% | |
!! | GTAATCGATTTGAAACTGTT+TGG | - | chr1_4:17935747-17935766 | Msa0153910:CDS | 30.0% |
AAGAACATCAATCATAATCC+TGG | + | chr1_4:17935825-17935844 | None:intergenic | 30.0% | |
CTCAAATTAACAATAACCGA+AGG | + | chr1_4:17935917-17935936 | None:intergenic | 30.0% | |
GTTCATGTTAAAGTTAGGTT+AGG | - | chr1_4:17936058-17936077 | Msa0153910:intron | 30.0% | |
TCATGTTAAAGTTAGGTTAG+GGG | - | chr1_4:17936060-17936079 | Msa0153910:intron | 30.0% | |
!!! | TTCGTTTATTTTTGTGAGAC+GGG | - | chr1_4:17936141-17936160 | Msa0153910:CDS | 30.0% |
ACTTATGAATGTGTTATCGT+TGG | - | chr1_4:17936231-17936250 | Msa0153910:CDS | 30.0% | |
ATCCTTTATCTAACAACACA+GGG | + | chr1_4:17936405-17936424 | None:intergenic | 30.0% | |
AATCCTTTATCTAACAACAC+AGG | + | chr1_4:17936406-17936425 | None:intergenic | 30.0% | |
! | GAGTATGACTTTGAGAATGT+CGG | - | chr1_4:17935934-17935953 | Msa0153910:intron | 35.0% |
TAAAGTTAGGTTAGGGGATT+TGG | - | chr1_4:17936066-17936085 | Msa0153910:intron | 35.0% | |
! | AGGGGATTTGGATTTTTCTT+TGG | - | chr1_4:17936078-17936097 | Msa0153910:intron | 35.0% |
TTTGGCGATGTATAATGAGA+TGG | - | chr1_4:17936096-17936115 | Msa0153910:intron | 35.0% | |
!!! | TTTATTTTTGTGAGACGGGA+CGG | - | chr1_4:17936145-17936164 | Msa0153910:CDS | 35.0% |
AAATGGAAAGGAAGAGGTTA+AGG | - | chr1_4:17936196-17936215 | Msa0153910:CDS | 35.0% | |
AATGGAAAGGAAGAGGTTAA+GGG | - | chr1_4:17936197-17936216 | Msa0153910:CDS | 35.0% | |
CATGGTTAATTATGCGAGAA+AGG | - | chr1_4:17936461-17936480 | Msa0153910:CDS | 35.0% | |
ACAGTATAAGTCTATGTGTC+TGG | - | chr1_4:17936521-17936540 | Msa0153910:CDS | 35.0% | |
ATAAGTCTATGTGTCTGGAT+TGG | - | chr1_4:17936526-17936545 | Msa0153910:CDS | 35.0% | |
!! | AAGCTGCAGAGAAGTATTTA+AGG | - | chr1_4:17936597-17936616 | Msa0153910:CDS | 35.0% |
GTCTCATATATAGCCACATT+TGG | + | chr1_4:17936647-17936666 | None:intergenic | 35.0% | |
ATATATGAGACATTGATCGC+TGG | - | chr1_4:17936656-17936675 | Msa0153910:CDS | 35.0% | |
! | GAGTATGACTTTGAGAATGT+CGG | - | chr1_4:17935934-17935953 | Msa0153910:intron | 35.0% |
TAAAGTTAGGTTAGGGGATT+TGG | - | chr1_4:17936066-17936085 | Msa0153910:intron | 35.0% | |
! | AGGGGATTTGGATTTTTCTT+TGG | - | chr1_4:17936078-17936097 | Msa0153910:intron | 35.0% |
TTTGGCGATGTATAATGAGA+TGG | - | chr1_4:17936096-17936115 | Msa0153910:intron | 35.0% | |
!!! | TTTATTTTTGTGAGACGGGA+CGG | - | chr1_4:17936145-17936164 | Msa0153910:CDS | 35.0% |
AAATGGAAAGGAAGAGGTTA+AGG | - | chr1_4:17936196-17936215 | Msa0153910:CDS | 35.0% | |
AATGGAAAGGAAGAGGTTAA+GGG | - | chr1_4:17936197-17936216 | Msa0153910:CDS | 35.0% | |
CATGGTTAATTATGCGAGAA+AGG | - | chr1_4:17936461-17936480 | Msa0153910:CDS | 35.0% | |
ACAGTATAAGTCTATGTGTC+TGG | - | chr1_4:17936521-17936540 | Msa0153910:CDS | 35.0% | |
ATAAGTCTATGTGTCTGGAT+TGG | - | chr1_4:17936526-17936545 | Msa0153910:CDS | 35.0% | |
!! | AAGCTGCAGAGAAGTATTTA+AGG | - | chr1_4:17936597-17936616 | Msa0153910:CDS | 35.0% |
GTCTCATATATAGCCACATT+TGG | + | chr1_4:17936647-17936666 | None:intergenic | 35.0% | |
ATATATGAGACATTGATCGC+TGG | - | chr1_4:17936656-17936675 | Msa0153910:CDS | 35.0% | |
! | TCGATTTGAAACTGTTTGGG+AGG | - | chr1_4:17935751-17935770 | Msa0153910:CDS | 40.0% |
GAAACTGTTTGGGAGGTTTA+TGG | - | chr1_4:17935758-17935777 | Msa0153910:CDS | 40.0% | |
TCCTGGAAGTAGCAACATTA+GGG | + | chr1_4:17935808-17935827 | None:intergenic | 40.0% | |
ATCCTGGAAGTAGCAACATT+AGG | + | chr1_4:17935809-17935828 | None:intergenic | 40.0% | |
! | ACAAAGGAATGTTGCTGCTT+TGG | - | chr1_4:17935859-17935878 | Msa0153910:intron | 40.0% |
! | GACTTTGAGAATGTCGGAAA+AGG | - | chr1_4:17935940-17935959 | Msa0153910:intron | 40.0% |
TTTGAGAATGTCGGAAAAGG+TGG | - | chr1_4:17935943-17935962 | Msa0153910:intron | 40.0% | |
TTGAGAATGTCGGAAAAGGT+GGG | - | chr1_4:17935944-17935963 | Msa0153910:intron | 40.0% | |
GATTGATGAGGGAAATGGAA+AGG | - | chr1_4:17936184-17936203 | Msa0153910:CDS | 40.0% | |
TATCGTTGGATACGCGAATT+CGG | - | chr1_4:17936245-17936264 | Msa0153910:CDS | 40.0% | |
!! | GTTCTTGGTTGTTTGTTGTC+TGG | - | chr1_4:17936321-17936340 | Msa0153910:CDS | 40.0% |
!! | TGGTTGTTTGTTGTCTGGTA+AGG | - | chr1_4:17936326-17936345 | Msa0153910:intron | 40.0% |
! | TGCCCTGTGTTGTTAGATAA+AGG | - | chr1_4:17936400-17936419 | Msa0153910:intron | 40.0% |
!! | ATTCAGTGTTTCTGCCGTTT+TGG | - | chr1_4:17936566-17936585 | Msa0153910:CDS | 40.0% |
CAGCTTCAACCTTTCCAAAA+CGG | + | chr1_4:17936583-17936602 | None:intergenic | 40.0% | |
TCTTCACCTTCGCAATGAAA+TGG | - | chr1_4:17936709-17936728 | Msa0153910:CDS | 40.0% | |
CTTCACCTTCGCAATGAAAT+GGG | - | chr1_4:17936710-17936729 | Msa0153910:CDS | 40.0% | |
! | TCGATTTGAAACTGTTTGGG+AGG | - | chr1_4:17935751-17935770 | Msa0153910:CDS | 40.0% |
GAAACTGTTTGGGAGGTTTA+TGG | - | chr1_4:17935758-17935777 | Msa0153910:CDS | 40.0% | |
TCCTGGAAGTAGCAACATTA+GGG | + | chr1_4:17935808-17935827 | None:intergenic | 40.0% | |
ATCCTGGAAGTAGCAACATT+AGG | + | chr1_4:17935809-17935828 | None:intergenic | 40.0% | |
! | ACAAAGGAATGTTGCTGCTT+TGG | - | chr1_4:17935859-17935878 | Msa0153910:intron | 40.0% |
! | GACTTTGAGAATGTCGGAAA+AGG | - | chr1_4:17935940-17935959 | Msa0153910:intron | 40.0% |
TTTGAGAATGTCGGAAAAGG+TGG | - | chr1_4:17935943-17935962 | Msa0153910:intron | 40.0% | |
TTGAGAATGTCGGAAAAGGT+GGG | - | chr1_4:17935944-17935963 | Msa0153910:intron | 40.0% | |
GATTGATGAGGGAAATGGAA+AGG | - | chr1_4:17936184-17936203 | Msa0153910:CDS | 40.0% | |
TATCGTTGGATACGCGAATT+CGG | - | chr1_4:17936245-17936264 | Msa0153910:CDS | 40.0% | |
!! | GTTCTTGGTTGTTTGTTGTC+TGG | - | chr1_4:17936321-17936340 | Msa0153910:CDS | 40.0% |
!! | TGGTTGTTTGTTGTCTGGTA+AGG | - | chr1_4:17936326-17936345 | Msa0153910:intron | 40.0% |
! | TGCCCTGTGTTGTTAGATAA+AGG | - | chr1_4:17936400-17936419 | Msa0153910:intron | 40.0% |
!! | ATTCAGTGTTTCTGCCGTTT+TGG | - | chr1_4:17936566-17936585 | Msa0153910:CDS | 40.0% |
CAGCTTCAACCTTTCCAAAA+CGG | + | chr1_4:17936583-17936602 | None:intergenic | 40.0% | |
TCTTCACCTTCGCAATGAAA+TGG | - | chr1_4:17936709-17936728 | Msa0153910:CDS | 40.0% | |
CTTCACCTTCGCAATGAAAT+GGG | - | chr1_4:17936710-17936729 | Msa0153910:CDS | 40.0% | |
! | ACCCTAATGTTGCTACTTCC+AGG | - | chr1_4:17935804-17935823 | Msa0153910:intron | 45.0% |
! | GCTGCTTTGGATCAGATTGT+TGG | - | chr1_4:17935872-17935891 | Msa0153910:intron | 45.0% |
GCGAAATTCACATTCGCCTT+CGG | - | chr1_4:17935898-17935917 | Msa0153910:intron | 45.0% | |
GGTTGGATTGATGAGGGAAA+TGG | - | chr1_4:17936179-17936198 | Msa0153910:CDS | 45.0% | |
TGAGGGAAATGGAAAGGAAG+AGG | - | chr1_4:17936190-17936209 | Msa0153910:CDS | 45.0% | |
ATCGTTGGATACGCGAATTC+GGG | - | chr1_4:17936246-17936265 | Msa0153910:CDS | 45.0% | |
ATACGCGAATTCGGGTAGAT+TGG | - | chr1_4:17936254-17936273 | Msa0153910:CDS | 45.0% | |
TTCGAAGAAATGCTGAGTGC+TGG | - | chr1_4:17936294-17936313 | Msa0153910:CDS | 45.0% | |
TCGAAGAAATGCTGAGTGCT+GGG | - | chr1_4:17936295-17936314 | Msa0153910:CDS | 45.0% | |
ACTGAGAAGCTCTGTGAGAA+TGG | - | chr1_4:17936351-17936370 | Msa0153910:intron | 45.0% | |
TGAGAATGGAGAAGTGGAGA+AGG | - | chr1_4:17936365-17936384 | Msa0153910:intron | 45.0% | |
!!! | GTGTTTCTGCCGTTTTGGAA+AGG | - | chr1_4:17936571-17936590 | Msa0153910:CDS | 45.0% |
TGCAGGAGAGAAATGACGAT+AGG | - | chr1_4:17936684-17936703 | Msa0153910:CDS | 45.0% | |
GCAGGAGAGAAATGACGATA+GGG | - | chr1_4:17936685-17936704 | Msa0153910:CDS | 45.0% | |
ATGAGCCCATTTCATTGCGA+AGG | + | chr1_4:17936718-17936737 | None:intergenic | 45.0% | |
! | TCGCAATGAAATGGGCTCAT+TGG | - | chr1_4:17936718-17936737 | Msa0153910:CDS | 45.0% |
! | ACCCTAATGTTGCTACTTCC+AGG | - | chr1_4:17935804-17935823 | Msa0153910:intron | 45.0% |
! | GCTGCTTTGGATCAGATTGT+TGG | - | chr1_4:17935872-17935891 | Msa0153910:intron | 45.0% |
GCGAAATTCACATTCGCCTT+CGG | - | chr1_4:17935898-17935917 | Msa0153910:intron | 45.0% | |
GGTTGGATTGATGAGGGAAA+TGG | - | chr1_4:17936179-17936198 | Msa0153910:CDS | 45.0% | |
TGAGGGAAATGGAAAGGAAG+AGG | - | chr1_4:17936190-17936209 | Msa0153910:CDS | 45.0% | |
ATCGTTGGATACGCGAATTC+GGG | - | chr1_4:17936246-17936265 | Msa0153910:CDS | 45.0% | |
ATACGCGAATTCGGGTAGAT+TGG | - | chr1_4:17936254-17936273 | Msa0153910:CDS | 45.0% | |
TTCGAAGAAATGCTGAGTGC+TGG | - | chr1_4:17936294-17936313 | Msa0153910:CDS | 45.0% | |
TCGAAGAAATGCTGAGTGCT+GGG | - | chr1_4:17936295-17936314 | Msa0153910:CDS | 45.0% | |
ACTGAGAAGCTCTGTGAGAA+TGG | - | chr1_4:17936351-17936370 | Msa0153910:intron | 45.0% | |
TGAGAATGGAGAAGTGGAGA+AGG | - | chr1_4:17936365-17936384 | Msa0153910:intron | 45.0% | |
!!! | GTGTTTCTGCCGTTTTGGAA+AGG | - | chr1_4:17936571-17936590 | Msa0153910:CDS | 45.0% |
TGCAGGAGAGAAATGACGAT+AGG | - | chr1_4:17936684-17936703 | Msa0153910:CDS | 45.0% | |
GCAGGAGAGAAATGACGATA+GGG | - | chr1_4:17936685-17936704 | Msa0153910:CDS | 45.0% | |
ATGAGCCCATTTCATTGCGA+AGG | + | chr1_4:17936718-17936737 | None:intergenic | 45.0% | |
! | TCGCAATGAAATGGGCTCAT+TGG | - | chr1_4:17936718-17936737 | Msa0153910:CDS | 45.0% |
TCGGAAAAGGTGGGAGAAGA+AGG | - | chr1_4:17935953-17935972 | Msa0153910:intron | 50.0% | |
CGGAAAAGGTGGGAGAAGAA+GGG | - | chr1_4:17935954-17935973 | Msa0153910:intron | 50.0% | |
AAGAGGCGGTTGGATTGATG+AGG | - | chr1_4:17936172-17936191 | Msa0153910:CDS | 50.0% | |
AGAGGCGGTTGGATTGATGA+GGG | - | chr1_4:17936173-17936192 | Msa0153910:CDS | 50.0% | |
CGGGTAGATTGGAACAGTGT+TGG | - | chr1_4:17936265-17936284 | Msa0153910:CDS | 50.0% | |
GCTCTGTGAGAATGGAGAAG+TGG | - | chr1_4:17936359-17936378 | Msa0153910:intron | 50.0% | |
GCGAGAAAGGACGAAGTTCA+AGG | - | chr1_4:17936474-17936493 | Msa0153910:CDS | 50.0% | |
TCGGTCGTAGACTCCAAATG+TGG | - | chr1_4:17936631-17936650 | Msa0153910:CDS | 50.0% | |
ATTGATCGCTGGTCACATGC+AGG | - | chr1_4:17936667-17936686 | Msa0153910:CDS | 50.0% | |
TCGGAAAAGGTGGGAGAAGA+AGG | - | chr1_4:17935953-17935972 | Msa0153910:intron | 50.0% | |
CGGAAAAGGTGGGAGAAGAA+GGG | - | chr1_4:17935954-17935973 | Msa0153910:intron | 50.0% | |
AAGAGGCGGTTGGATTGATG+AGG | - | chr1_4:17936172-17936191 | Msa0153910:CDS | 50.0% | |
AGAGGCGGTTGGATTGATGA+GGG | - | chr1_4:17936173-17936192 | Msa0153910:CDS | 50.0% | |
CGGGTAGATTGGAACAGTGT+TGG | - | chr1_4:17936265-17936284 | Msa0153910:CDS | 50.0% | |
GCTCTGTGAGAATGGAGAAG+TGG | - | chr1_4:17936359-17936378 | Msa0153910:intron | 50.0% | |
GCGAGAAAGGACGAAGTTCA+AGG | - | chr1_4:17936474-17936493 | Msa0153910:CDS | 50.0% | |
TCGGTCGTAGACTCCAAATG+TGG | - | chr1_4:17936631-17936650 | Msa0153910:CDS | 50.0% | |
ATTGATCGCTGGTCACATGC+AGG | - | chr1_4:17936667-17936686 | Msa0153910:CDS | 50.0% | |
!! | TGAGACGGGACGGATTGAAG+AGG | - | chr1_4:17936155-17936174 | Msa0153910:CDS | 55.0% |
!! | CTGAGTGCTGGGTCTGTTCT+TGG | - | chr1_4:17936306-17936325 | Msa0153910:CDS | 55.0% |
!! | TGAGACGGGACGGATTGAAG+AGG | - | chr1_4:17936155-17936174 | Msa0153910:CDS | 55.0% |
!! | CTGAGTGCTGGGTCTGTTCT+TGG | - | chr1_4:17936306-17936325 | Msa0153910:CDS | 55.0% |
!! | GACGGGACGGATTGAAGAGG+CGG | - | chr1_4:17936158-17936177 | Msa0153910:CDS | 60.0% |
!! | GGACGGATTGAAGAGGCGGT+TGG | - | chr1_4:17936162-17936181 | Msa0153910:CDS | 60.0% |
!! | GACGGGACGGATTGAAGAGG+CGG | - | chr1_4:17936158-17936177 | Msa0153910:CDS | 60.0% |
!! | GGACGGATTGAAGAGGCGGT+TGG | - | chr1_4:17936162-17936181 | Msa0153910:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 17935743 | 17936757 | 17935743 | ID=Msa0153910;Name=Msa0153910 |
chr1_4 | mRNA | 17935743 | 17936757 | 17935743 | ID=Msa0153910-mRNA-1;Parent=Msa0153910;Name=Msa0153910-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|1|3|0|207 |
chr1_4 | exon | 17936431 | 17936757 | 17936431 | ID=Msa0153910-mRNA-1:exon:6751;Parent=Msa0153910-mRNA-1 |
chr1_4 | exon | 17936114 | 17936341 | 17936114 | ID=Msa0153910-mRNA-1:exon:6750;Parent=Msa0153910-mRNA-1 |
chr1_4 | exon | 17935743 | 17935811 | 17935743 | ID=Msa0153910-mRNA-1:exon:6749;Parent=Msa0153910-mRNA-1 |
chr1_4 | CDS | 17936431 | 17936757 | 17936431 | ID=Msa0153910-mRNA-1:cds;Parent=Msa0153910-mRNA-1 |
chr1_4 | CDS | 17936114 | 17936341 | 17936114 | ID=Msa0153910-mRNA-1:cds;Parent=Msa0153910-mRNA-1 |
chr1_4 | CDS | 17935743 | 17935811 | 17935743 | ID=Msa0153910-mRNA-1:cds;Parent=Msa0153910-mRNA-1 |
Gene Sequence |
Protein sequence |