Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241190 | XP_003627978.1 | 98.913 | 92 | 1 | 0 | 1 | 92 | 29 | 120 | 4.80e-63 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241190 | sp|Q9SGA6|RS191_ARATH | 82.609 | 92 | 16 | 0 | 1 | 92 | 29 | 120 | 1.45e-57 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241190 | B7FHE5 | 98.913 | 92 | 1 | 0 | 1 | 92 | 29 | 120 | 2.29e-63 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002790 | Msa1241190 | 0.807712 | 4.420122e-50 | -8.615850e-47 |
| Msa0022970 | Msa1241190 | 0.822629 | 2.138121e-53 | -8.615850e-47 |
| Msa0042280 | Msa1241190 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0045730 | Msa1241190 | 0.844717 | 6.361343e-59 | -8.615850e-47 |
| Msa0057610 | Msa1241190 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0069440 | Msa1241190 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0076040 | Msa1241190 | 0.809435 | 1.894872e-50 | -8.615850e-47 |
| Msa0077010 | Msa1241190 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0097600 | Msa1241190 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0116130 | Msa1241190 | 0.870806 | 1.104466e-66 | -8.615850e-47 |
| Msa0116670 | Msa1241190 | 0.834917 | 2.271624e-56 | -8.615850e-47 |
| Msa0118710 | Msa1241190 | 0.828801 | 7.346809e-55 | -8.615850e-47 |
| Msa0603320 | Msa1241190 | 0.802049 | 6.746953e-49 | -8.615850e-47 |
| Msa0604960 | Msa1241190 | 0.832811 | 7.639489e-56 | -8.615850e-47 |
| Msa0615580 | Msa1241190 | 0.833944 | 3.985258e-56 | -8.615850e-47 |
| Msa0619860 | Msa1241190 | 0.816598 | 5.092358e-52 | -8.615850e-47 |
| Msa0623200 | Msa1241190 | 0.843116 | 1.707865e-58 | -8.615850e-47 |
| Msa0631250 | Msa1241190 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa0633570 | Msa1241190 | 0.817554 | 3.105311e-52 | -8.615850e-47 |
| Msa0654870 | Msa1241190 | 0.813345 | 2.683185e-51 | -8.615850e-47 |
| Msa0656810 | Msa1241190 | 0.809938 | 1.477461e-50 | -8.615850e-47 |
| Msa0659030 | Msa1241190 | 0.849836 | 2.503437e-60 | -8.615850e-47 |
| Msa0666230 | Msa1241190 | 0.837975 | 3.785132e-57 | -8.615850e-47 |
| Msa0705000 | Msa1241190 | 0.869134 | 3.888268e-66 | -8.615850e-47 |
| Msa0705040 | Msa1241190 | 0.866991 | 1.900990e-65 | -8.615850e-47 |
| Msa0706500 | Msa1241190 | 0.817920 | 2.566913e-52 | -8.615850e-47 |
| Msa0709780 | Msa1241190 | 0.805269 | 1.448246e-49 | -8.615850e-47 |
| Msa0712610 | Msa1241190 | 0.823152 | 1.615327e-53 | -8.615850e-47 |
| Msa0729200 | Msa1241190 | 0.862207 | 5.969100e-64 | -8.615850e-47 |
| Msa0738100 | Msa1241190 | 0.824454 | 8.000265e-54 | -8.615850e-47 |
| Msa0739080 | Msa1241190 | 0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0766080 | Msa1241190 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0769590 | Msa1241190 | 0.861880 | 7.514610e-64 | -8.615850e-47 |
| Msa0785130 | Msa1241190 | 0.888728 | 4.562648e-73 | -8.615850e-47 |
| Msa0792420 | Msa1241190 | 0.806270 | 8.923176e-50 | -8.615850e-47 |
| Msa0806880 | Msa1241190 | 0.848024 | 7.976736e-60 | -8.615850e-47 |
| Msa0808800 | Msa1241190 | 0.813516 | 2.460486e-51 | -8.615850e-47 |
| Msa0817540 | Msa1241190 | 0.856552 | 2.979181e-62 | -8.615850e-47 |
| Msa0819540 | Msa1241190 | 0.851416 | 9.005468e-61 | -8.615850e-47 |
| Msa0126840 | Msa1241190 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0152870 | Msa1241190 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0166750 | Msa1241190 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0167480 | Msa1241190 | 0.857943 | 1.156119e-62 | -8.615850e-47 |
| Msa0173530 | Msa1241190 | 0.833510 | 5.117301e-56 | -8.615850e-47 |
| Msa0177360 | Msa1241190 | 0.821529 | 3.847007e-53 | -8.615850e-47 |
| Msa0180020 | Msa1241190 | 0.807582 | 4.711614e-50 | -8.615850e-47 |
| Msa0181610 | Msa1241190 | 0.821119 | 4.782617e-53 | -8.615850e-47 |
| Msa0207710 | Msa1241190 | 0.804094 | 2.548043e-49 | -8.615850e-47 |
| Msa0218830 | Msa1241190 | 0.852474 | 4.510005e-61 | -8.615850e-47 |
| Msa0219120 | Msa1241190 | 0.842005 | 3.367229e-58 | -8.615850e-47 |
| Msa0221030 | Msa1241190 | 0.899259 | 2.366641e-77 | -8.615850e-47 |
| Msa0224560 | Msa1241190 | 0.822148 | 2.765463e-53 | -8.615850e-47 |
| Msa0226460 | Msa1241190 | 0.812337 | 4.460655e-51 | -8.615850e-47 |
| Msa0230490 | Msa1241190 | 0.815958 | 7.079369e-52 | -8.615850e-47 |
| Msa0230520 | Msa1241190 | 0.804072 | 2.575035e-49 | -8.615850e-47 |
| Msa0231100 | Msa1241190 | 0.811928 | 5.477940e-51 | -8.615850e-47 |
| Msa1227690 | Msa1241190 | 0.837850 | 4.075020e-57 | -8.615850e-47 |
| Msa1230580 | Msa1241190 | 0.800623 | 1.321386e-48 | -8.615850e-47 |
| Msa1241190 | Msa1266060 | 0.822308 | 2.538970e-53 | -8.615850e-47 |
| Msa1241190 | Msa1294840 | 0.808735 | 2.676063e-50 | -8.615850e-47 |
| Msa1241190 | Msa1329300 | 0.818339 | 2.063866e-52 | -8.615850e-47 |
| Msa1241190 | Msa1331250 | 0.821305 | 4.333925e-53 | -8.615850e-47 |
| Msa1241190 | Msa1331710 | 0.837825 | 4.134672e-57 | -8.615850e-47 |
| Msa1241190 | Msa1338190 | 0.819383 | 1.195705e-52 | -8.615850e-47 |
| Msa1241190 | Msa1349570 | 0.884310 | 2.138821e-71 | -8.615850e-47 |
| Msa1241190 | Msa1356790 | 0.810107 | 1.358842e-50 | -8.615850e-47 |
| Msa1241190 | Msa1362790 | 0.808552 | 2.927654e-50 | -8.615850e-47 |
| Msa1241190 | Msa1363330 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
| Msa1241190 | Msa1363860 | 0.832089 | 1.153158e-55 | -8.615850e-47 |
| Msa1241190 | Msa1369190 | 0.866719 | 2.320821e-65 | -8.615850e-47 |
| Msa1241190 | Msa1374240 | 0.841472 | 4.654340e-58 | -8.615850e-47 |
| Msa1241190 | Msa1379760 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa1241190 | Msa1386600 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa1241190 | Msa1392590 | 0.808361 | 3.216397e-50 | -8.615850e-47 |
| Msa1241190 | Msa1401390 | 0.807273 | 5.478839e-50 | -8.615850e-47 |
| Msa1241190 | Msa1410440 | 0.824224 | 9.063481e-54 | -8.615850e-47 |
| Msa1241190 | Msa1413500 | 0.845744 | 3.354444e-59 | -8.615850e-47 |
| Msa1241190 | Msa1425670 | 0.805700 | 1.176289e-49 | -8.615850e-47 |
| Msa1241190 | Msa1426370 | 0.815229 | 1.028936e-51 | -8.615850e-47 |
| Msa1241190 | Msa1426490 | 0.874622 | 5.847051e-68 | -8.615850e-47 |
| Msa1241190 | Msa1427560 | 0.834860 | 2.347522e-56 | -8.615850e-47 |
| Msa1241190 | Msa1442850 | 0.808196 | 3.488340e-50 | -8.615850e-47 |
| Msa1241190 | Msa1450280 | 0.830115 | 3.521607e-55 | -8.615850e-47 |
| Msa1241190 | Msa1462860 | 0.828663 | 7.930456e-55 | -8.615850e-47 |
| Msa0423750 | Msa1241190 | 0.825349 | 4.921574e-54 | -8.615850e-47 |
| Msa0443390 | Msa1241190 | 0.854933 | 8.845729e-62 | -8.615850e-47 |
| Msa1019240 | Msa1241190 | 0.841230 | 5.388882e-58 | -8.615850e-47 |
| Msa1019260 | Msa1241190 | 0.835530 | 1.590448e-56 | -8.615850e-47 |
| Msa1048690 | Msa1241190 | 0.800212 | 1.602011e-48 | -8.615850e-47 |
| Msa1070390 | Msa1241190 | 0.805003 | 1.646109e-49 | -8.615850e-47 |
| Msa1072710 | Msa1241190 | 0.817821 | 2.703206e-52 | -8.615850e-47 |
| Msa1083880 | Msa1241190 | 0.810347 | 1.205710e-50 | -8.615850e-47 |
| Msa1085470 | Msa1241190 | 0.808131 | 3.599992e-50 | -8.615850e-47 |
| Msa1104210 | Msa1241190 | 0.827512 | 1.501513e-54 | -8.615850e-47 |
| Msa0245580 | Msa1241190 | 0.808462 | 3.061085e-50 | -8.615850e-47 |
| Msa0258850 | Msa1241190 | 0.826822 | 2.196658e-54 | -8.615850e-47 |
| Msa0262480 | Msa1241190 | 0.866185 | 3.429265e-65 | -8.615850e-47 |
| Msa0291520 | Msa1241190 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
| Msa0296250 | Msa1241190 | 0.817865 | 2.641963e-52 | -8.615850e-47 |
| Msa0298200 | Msa1241190 | 0.835497 | 1.621067e-56 | -8.615850e-47 |
| Msa0300350 | Msa1241190 | 0.865591 | 5.285643e-65 | -8.615850e-47 |
| Msa0306690 | Msa1241190 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa0327300 | Msa1241190 | 0.820565 | 6.413202e-53 | -8.615850e-47 |
| Msa0332640 | Msa1241190 | 0.802437 | 5.613964e-49 | -8.615850e-47 |
| Msa0333190 | Msa1241190 | 0.818218 | 2.198922e-52 | -8.615850e-47 |
| Msa0348830 | Msa1241190 | 0.837788 | 4.226513e-57 | -8.615850e-47 |
| Msa0359600 | Msa1241190 | 0.804850 | 1.772462e-49 | -8.615850e-47 |
| Msa1165780 | Msa1241190 | 0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa1166870 | Msa1241190 | 0.854198 | 1.444420e-61 | -8.615850e-47 |
| Msa1184370 | Msa1241190 | 0.818620 | 1.782871e-52 | -8.615850e-47 |
| Msa1195300 | Msa1241190 | 0.810860 | 9.343699e-51 | -8.615850e-47 |
| Msa1201830 | Msa1241190 | 0.811322 | 7.420069e-51 | -8.615850e-47 |
| Msa1208020 | Msa1241190 | 0.843603 | 1.266096e-58 | -8.615850e-47 |
| Msa0526540 | Msa1241190 | 0.832894 | 7.284704e-56 | -8.615850e-47 |
| Msa0527150 | Msa1241190 | 0.815634 | 8.361213e-52 | -8.615850e-47 |
| Msa0534750 | Msa1241190 | 0.861331 | 1.105771e-63 | -8.615850e-47 |
| Msa0550570 | Msa1241190 | 0.800466 | 1.422149e-48 | -8.615850e-47 |
| Msa0561430 | Msa1241190 | 0.808068 | 3.713412e-50 | -8.615850e-47 |
| Msa0576940 | Msa1241190 | 0.833689 | 4.617280e-56 | -8.615850e-47 |
| Msa0581070 | Msa1241190 | 0.801466 | 8.884171e-49 | -8.615850e-47 |
| Msa0584030 | Msa1241190 | 0.800749 | 1.245494e-48 | -8.615850e-47 |
| Msa0590940 | Msa1241190 | 0.818823 | 1.602739e-52 | -8.615850e-47 |
| Msa0593700 | Msa1241190 | 0.815192 | 1.048343e-51 | -8.615850e-47 |
| Msa0867060 | Msa1241190 | 0.825250 | 5.192100e-54 | -8.615850e-47 |
| Msa0888810 | Msa1241190 | 0.816585 | 5.125553e-52 | -8.615850e-47 |
| Msa0943170 | Msa1241190 | 0.832691 | 8.180341e-56 | -8.615850e-47 |
| Msa0945480 | Msa1241190 | 0.856340 | 3.437305e-62 | -8.615850e-47 |
| Msa0960830 | Msa1241190 | 0.804706 | 1.899167e-49 | -8.615850e-47 |
| Msa0963020 | Msa1241190 | 0.837814 | 4.161818e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241190 | MtrunA17_Chr8g0353881 | 98.913 | 92 | 1 | 0 | 1 | 92 | 29 | 120 | 4.41e-67 | 197 |
| Msa1241190 | MtrunA17_Chr3g0081741 | 91.304 | 92 | 8 | 0 | 1 | 92 | 29 | 120 | 8.17e-64 | 189 |
| Msa1241190 | MtrunA17_Chr3g0081771 | 78.571 | 56 | 12 | 0 | 30 | 85 | 8 | 63 | 1.61e-28 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241190 | AT3G02080.1 | 82.609 | 92 | 16 | 0 | 1 | 92 | 29 | 120 | 1.47e-58 | 176 |
| Msa1241190 | AT5G15520.1 | 81.522 | 92 | 17 | 0 | 1 | 92 | 29 | 120 | 2.00e-57 | 173 |
| Msa1241190 | AT5G61170.1 | 79.348 | 92 | 19 | 0 | 1 | 92 | 29 | 120 | 2.60e-57 | 173 |
Find 28 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCATTCCAAAGGATTTA+TGG | 0.171916 | 8_2:-24558625 | Msa1241190:CDS |
| AACTGCAAAATTCAAAGAAT+TGG | 0.319374 | 8_2:-24558850 | Msa1241190:CDS |
| ATAATACCAATCAGGATCAT+AGG | 0.347366 | 8_2:+24558824 | None:intergenic |
| GGCTCCCACCATAAATCCTT+TGG | 0.389483 | 8_2:+24558617 | None:intergenic |
| ATCTACATAAGAGGCGGTCT+TGG | 0.403127 | 8_2:-24558652 | Msa1241190:CDS |
| GTACTCAATTTCAGCTTCCA+TGG | 0.471471 | 8_2:-24558683 | Msa1241190:intron |
| TGGCTCCCTATGATCCTGAT+TGG | 0.474063 | 8_2:-24558830 | Msa1241190:CDS |
| GCTCTAACATAATACCAATC+AGG | 0.489642 | 8_2:+24558816 | None:intergenic |
| TTGGTGTTGGTTCATTCCAA+AGG | 0.500013 | 8_2:-24558633 | Msa1241190:CDS |
| TATGTAGATCTTCCTTGCCA+TGG | 0.510578 | 8_2:+24558666 | None:intergenic |
| GAGGGCGACTTCCATTCCTC+TGG | 0.516528 | 8_2:+24558596 | None:intergenic |
| ATAAGAGGCGGTCTTGGTGT+TGG | 0.519137 | 8_2:-24558646 | Msa1241190:CDS |
| TAATACCAATCAGGATCATA+GGG | 0.537599 | 8_2:+24558825 | None:intergenic |
| CAATTTCAGCTTCCATGGCA+AGG | 0.544710 | 8_2:-24558678 | Msa1241190:intron |
| GCAAGGAAGATCTACATAAG+AGG | 0.545628 | 8_2:-24558661 | Msa1241190:CDS |
| TCGTCACATTCTTCAACAGT+TGG | 0.571334 | 8_2:-24558542 | Msa1241190:CDS |
| CATTCCAAAGGATTTATGGT+GGG | 0.572274 | 8_2:-24558621 | Msa1241190:CDS |
| GGATTTATGGTGGGAGCCAG+AGG | 0.572742 | 8_2:-24558612 | Msa1241190:CDS |
| GATTGGTATTATGTTAGAGC+TGG | 0.573765 | 8_2:-24558813 | Msa1241190:intron |
| GAACATGAACCTCATCGAGA+TGG | 0.583253 | 8_2:-24558518 | Msa1241190:CDS |
| TCATCGAGATGGATACCAAA+GGG | 0.584221 | 8_2:-24558507 | Msa1241190:CDS |
| TATGGTGGGAGCCAGAGGAA+TGG | 0.616028 | 8_2:-24558607 | Msa1241190:CDS |
| TCATTCCAAAGGATTTATGG+TGG | 0.619819 | 8_2:-24558622 | Msa1241190:CDS |
| TTGACAAGATCAGTCCACTC+AGG | 0.623178 | 8_2:+24558873 | None:intergenic |
| AATAGTTGGAGCTGCCTGAG+TGG | 0.627148 | 8_2:-24558887 | None:intergenic |
| CTCATCGAGATGGATACCAA+AGG | 0.653842 | 8_2:-24558508 | Msa1241190:CDS |
| CTTTGGTATCCATCTCGATG+AGG | 0.659041 | 8_2:+24558509 | None:intergenic |
| AGGAAGATCTACATAAGAGG+CGG | 0.678529 | 8_2:-24558658 | Msa1241190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACTGCAAAATTCAAAGAAT+TGG | - | chr8_2:24558536-24558555 | Msa1241190:CDS | 25.0% |
| ! | AACATGATACTTCTAATTCT+TGG | - | chr8_2:24558639-24558658 | Msa1241190:CDS | 25.0% |
| TAATACCAATCAGGATCATA+GGG | + | chr8_2:24558564-24558583 | None:intergenic | 30.0% | |
| ATAATACCAATCAGGATCAT+AGG | + | chr8_2:24558565-24558584 | None:intergenic | 30.0% | |
| GCTCTAACATAATACCAATC+AGG | + | chr8_2:24558573-24558592 | None:intergenic | 35.0% | |
| GATTGGTATTATGTTAGAGC+TGG | - | chr8_2:24558573-24558592 | Msa1241190:CDS | 35.0% | |
| ! | TCTTGGTATTTTGTTGCTGT+TGG | - | chr8_2:24558656-24558675 | Msa1241190:CDS | 35.0% |
| GGTTCATTCCAAAGGATTTA+TGG | - | chr8_2:24558761-24558780 | Msa1241190:intron | 35.0% | |
| TCATTCCAAAGGATTTATGG+TGG | - | chr8_2:24558764-24558783 | Msa1241190:intron | 35.0% | |
| CATTCCAAAGGATTTATGGT+GGG | - | chr8_2:24558765-24558784 | Msa1241190:intron | 35.0% | |
| GTACTCAATTTCAGCTTCCA+TGG | - | chr8_2:24558703-24558722 | Msa1241190:intron | 40.0% | |
| TATGTAGATCTTCCTTGCCA+TGG | + | chr8_2:24558723-24558742 | None:intergenic | 40.0% | |
| GCAAGGAAGATCTACATAAG+AGG | - | chr8_2:24558725-24558744 | Msa1241190:intron | 40.0% | |
| AGGAAGATCTACATAAGAGG+CGG | - | chr8_2:24558728-24558747 | Msa1241190:intron | 40.0% | |
| !! | TTGGTGTTGGTTCATTCCAA+AGG | - | chr8_2:24558753-24558772 | Msa1241190:intron | 40.0% |
| TGCTCTTGCAAAAATGTGGA+GGG | + | chr8_2:24558811-24558830 | None:intergenic | 40.0% | |
| TCGTCACATTCTTCAACAGT+TGG | - | chr8_2:24558844-24558863 | Msa1241190:CDS | 40.0% | |
| TCATCGAGATGGATACCAAA+GGG | - | chr8_2:24558879-24558898 | Msa1241190:CDS | 40.0% | |
| TTGACAAGATCAGTCCACTC+AGG | + | chr8_2:24558516-24558535 | None:intergenic | 45.0% | |
| CAATTTCAGCTTCCATGGCA+AGG | - | chr8_2:24558708-24558727 | Msa1241190:intron | 45.0% | |
| ATCTACATAAGAGGCGGTCT+TGG | - | chr8_2:24558734-24558753 | Msa1241190:intron | 45.0% | |
| CTGCTCTTGCAAAAATGTGG+AGG | + | chr8_2:24558812-24558831 | None:intergenic | 45.0% | |
| CCACTGCTCTTGCAAAAATG+TGG | + | chr8_2:24558815-24558834 | None:intergenic | 45.0% | |
| ! | CCACATTTTTGCAAGAGCAG+TGG | - | chr8_2:24558812-24558831 | Msa1241190:intron | 45.0% |
| GAACATGAACCTCATCGAGA+TGG | - | chr8_2:24558868-24558887 | Msa1241190:CDS | 45.0% | |
| CTTTGGTATCCATCTCGATG+AGG | + | chr8_2:24558880-24558899 | None:intergenic | 45.0% | |
| CTCATCGAGATGGATACCAA+AGG | - | chr8_2:24558878-24558897 | Msa1241190:CDS | 45.0% | |
| TGGCTCCCTATGATCCTGAT+TGG | - | chr8_2:24558556-24558575 | Msa1241190:CDS | 50.0% | |
| ! | ATAAGAGGCGGTCTTGGTGT+TGG | - | chr8_2:24558740-24558759 | Msa1241190:intron | 50.0% |
| GGCTCCCACCATAAATCCTT+TGG | + | chr8_2:24558772-24558791 | None:intergenic | 50.0% | |
| ! | GGATTTATGGTGGGAGCCAG+AGG | - | chr8_2:24558774-24558793 | Msa1241190:intron | 55.0% |
| ! | TATGGTGGGAGCCAGAGGAA+TGG | - | chr8_2:24558779-24558798 | Msa1241190:intron | 55.0% |
| GAGGGCGACTTCCATTCCTC+TGG | + | chr8_2:24558793-24558812 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 24558504 | 24558904 | 24558504 | ID=Msa1241190;Name=Msa1241190 |
| chr8_2 | mRNA | 24558504 | 24558904 | 24558504 | ID=Msa1241190-mRNA-1;Parent=Msa1241190;Name=Msa1241190-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|1|0|1|1|1|2|0|92 |
| chr8_2 | exon | 24558814 | 24558904 | 24558814 | ID=Msa1241190-mRNA-1:exon:8687;Parent=Msa1241190-mRNA-1 |
| chr8_2 | exon | 24558504 | 24558691 | 24558504 | ID=Msa1241190-mRNA-1:exon:8686;Parent=Msa1241190-mRNA-1 |
| chr8_2 | CDS | 24558814 | 24558904 | 24558814 | ID=Msa1241190-mRNA-1:cds;Parent=Msa1241190-mRNA-1 |
| chr8_2 | CDS | 24558504 | 24558691 | 24558504 | ID=Msa1241190-mRNA-1:cds;Parent=Msa1241190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
