Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224150 | XP_003597571.1 | 91.777 | 377 | 8 | 1 | 1 | 354 | 1 | 377 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224150 | sp|A6H213|SURE_FLAPJ | 30.435 | 230 | 116 | 9 | 49 | 246 | 2 | 219 | 9.24e-20 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224150 | G7IS42 | 91.777 | 377 | 8 | 1 | 1 | 354 | 1 | 377 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0224150 | -0.832422 | 9.541231e-56 | -8.615850e-47 |
| Msa0027580 | Msa0224150 | 0.807250 | 5.539900e-50 | -8.615850e-47 |
| Msa0030310 | Msa0224150 | 0.801123 | 1.044538e-48 | -8.615850e-47 |
| Msa0075340 | Msa0224150 | 0.806468 | 8.106601e-50 | -8.615850e-47 |
| Msa0100800 | Msa0224150 | 0.801905 | 7.221283e-49 | -8.615850e-47 |
| Msa0113160 | Msa0224150 | 0.800352 | 1.500689e-48 | -8.615850e-47 |
| Msa0194970 | Msa0224150 | 0.811457 | 6.935484e-51 | -8.615850e-47 |
| Msa0224150 | Msa0259560 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0224150 | Msa0265290 | 0.919580 | 3.769532e-87 | -8.615850e-47 |
| Msa0224150 | Msa0291520 | 0.800253 | 1.572045e-48 | -8.615850e-47 |
| Msa0224150 | Msa0469910 | -0.840531 | 8.219806e-58 | -8.615850e-47 |
| Msa0224150 | Msa0513440 | 0.804670 | 1.932801e-49 | -8.615850e-47 |
| Msa0224150 | Msa0560470 | 0.817406 | 3.351975e-52 | -8.615850e-47 |
| Msa0224150 | Msa0614490 | 0.825038 | 5.829677e-54 | -8.615850e-47 |
| Msa0224150 | Msa0638690 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0224150 | Msa0639120 | 0.835635 | 1.496478e-56 | -8.615850e-47 |
| Msa0224150 | Msa0697400 | 0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa0224150 | Msa0711490 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0224150 | Msa0712310 | 0.813063 | 3.094300e-51 | -8.615850e-47 |
| Msa0224150 | Msa0715010 | -0.820792 | 5.688332e-53 | -8.615850e-47 |
| Msa0224150 | Msa0784620 | 0.808111 | 3.635741e-50 | -8.615850e-47 |
| Msa0224150 | Msa0795010 | 0.800643 | 1.309011e-48 | -8.615850e-47 |
| Msa0224150 | Msa0795030 | 0.804413 | 2.186035e-49 | -8.615850e-47 |
| Msa0224150 | Msa0798000 | -0.823448 | 1.377613e-53 | -8.615850e-47 |
| Msa0224150 | Msa0824730 | 0.805275 | 1.443854e-49 | -8.615850e-47 |
| Msa0224150 | Msa0830990 | 0.806022 | 1.006672e-49 | -8.615850e-47 |
| Msa0224150 | Msa0852730 | 0.808882 | 2.488818e-50 | -8.615850e-47 |
| Msa0224150 | Msa0881030 | 0.808530 | 2.960463e-50 | -8.615850e-47 |
| Msa0224150 | Msa0959010 | 0.819910 | 9.060354e-53 | -8.615850e-47 |
| Msa0224150 | Msa0993530 | 0.820438 | 6.859161e-53 | -8.615850e-47 |
| Msa0224150 | Msa1070050 | 0.807132 | 5.868315e-50 | -8.615850e-47 |
| Msa0224150 | Msa1126120 | -0.808399 | 3.157263e-50 | -8.615850e-47 |
| Msa0224150 | Msa1130210 | -0.808745 | 2.662897e-50 | -8.615850e-47 |
| Msa0224150 | Msa1136790 | 0.802833 | 4.649758e-49 | -8.615850e-47 |
| Msa0224150 | Msa1299360 | 0.802988 | 4.320556e-49 | -8.615850e-47 |
| Msa0224150 | Msa1362510 | 0.816980 | 4.179408e-52 | -8.615850e-47 |
| Msa0224150 | Msa1364060 | 0.919643 | 3.483632e-87 | -8.615850e-47 |
| Msa0224150 | Msa1377660 | 0.939115 | 2.182914e-99 | -8.615850e-47 |
| Msa0224150 | Msa1382310 | 0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa0224150 | Msa1425340 | 0.812986 | 3.216909e-51 | -8.615850e-47 |
| Msa0224150 | Msa1438450 | 0.808238 | 3.416197e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224150 | MtrunA17_Chr2g0330031 | 91.777 | 377 | 8 | 1 | 1 | 354 | 1 | 377 | 0.0 | 701 |
| Msa0224150 | MtrunA17_Chr1g0205501 | 32.219 | 329 | 165 | 5 | 45 | 349 | 3 | 297 | 8.85e-55 | 182 |
| Msa0224150 | MtrunA17_Chr5g0394431 | 32.229 | 332 | 162 | 7 | 45 | 349 | 3 | 298 | 2.08e-53 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224150 | AT1G72880.2 | 57.480 | 381 | 131 | 7 | 2 | 354 | 8 | 385 | 1.01e-143 | 412 |
| Msa0224150 | AT1G72880.1 | 57.480 | 381 | 131 | 7 | 2 | 354 | 8 | 385 | 1.01e-143 | 412 |
| Msa0224150 | AT4G14930.1 | 32.407 | 324 | 164 | 6 | 50 | 349 | 13 | 305 | 1.01e-49 | 169 |
| Msa0224150 | AT4G14930.2 | 41.951 | 205 | 95 | 2 | 50 | 230 | 13 | 217 | 1.69e-48 | 166 |
Find 110 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTCCATCTTTGCTTTA+AGG | 0.101982 | 2_1:-73920162 | None:intergenic |
| TTTCCCCTTTCTTCATTTCT+AGG | 0.132640 | 2_1:+73917138 | Msa0224150:five_prime_UTR |
| TTTAGGGATAAATCTGTTTC+TGG | 0.178353 | 2_1:+73917618 | Msa0224150:intron |
| GAAGTATTTCTTCACTTTAT+TGG | 0.213458 | 2_1:-73919403 | None:intergenic |
| TTCTACTCTGGGGTTGTTGC+TGG | 0.231757 | 2_1:+73918553 | Msa0224150:CDS |
| TGTGTTTCATTGGCTTTATC+TGG | 0.234130 | 2_1:+73917873 | Msa0224150:CDS |
| AAAAGCTTCTTGTAATTTCT+TGG | 0.239883 | 2_1:+73920314 | Msa0224150:three_prime_UTR |
| GCTTGTTCTGCTCAAGTTAA+TGG | 0.246805 | 2_1:+73917672 | Msa0224150:CDS |
| TGGATTTCTGCTGTGATTCC+TGG | 0.252539 | 2_1:+73920056 | Msa0224150:CDS |
| AATTCGATAGGGTTAGGATT+AGG | 0.265411 | 2_1:-73917351 | None:intergenic |
| CTTCATTGTTTCAGTTCCTT+TGG | 0.272424 | 2_1:+73920264 | Msa0224150:three_prime_UTR |
| CGTTGATAAATGCAGCTATC+AGG | 0.280646 | 2_1:+73918767 | Msa0224150:CDS |
| TGAAGAAAGAAAATTGAAAT+TGG | 0.282214 | 2_1:-73917095 | None:intergenic |
| TTTATTGAAATGTGCTCTAA+TGG | 0.283892 | 2_1:+73920454 | Msa0224150:three_prime_UTR |
| TTCTTCACTTTATTGGTATC+AGG | 0.291732 | 2_1:-73919396 | None:intergenic |
| TATATCATGTTATAGGAAAA+AGG | 0.296377 | 2_1:+73918696 | Msa0224150:intron |
| ATTCGATAGGGTTAGGATTA+GGG | 0.300748 | 2_1:-73917350 | None:intergenic |
| CTATCCAACTGGTCATTTCT+TGG | 0.301621 | 2_1:+73919120 | Msa0224150:CDS |
| CAATCCAAAGTTTAACTATC+TGG | 0.306685 | 2_1:-73920427 | None:intergenic |
| GCCAATCCACAAGGTGGCCT+TGG | 0.331528 | 2_1:+73919142 | Msa0224150:CDS |
| TCCTGCGGATTGTGTTTCAT+TGG | 0.339731 | 2_1:+73917863 | Msa0224150:CDS |
| GAAATGAAGAAAGGGGAAAA+AGG | 0.341908 | 2_1:-73917134 | None:intergenic |
| TTTGAAACAGCTAACCAGTT+TGG | 0.357202 | 2_1:-73919091 | None:intergenic |
| TTGGAGATTATTGAATCAAC+TGG | 0.357915 | 2_1:+73919360 | Msa0224150:CDS |
| GCTGTTTGTGAGCAAGATAA+TGG | 0.364803 | 2_1:-73917388 | None:intergenic |
| TTTCTTCCTTAAAGCAAAGA+TGG | 0.380472 | 2_1:+73920156 | Msa0224150:three_prime_UTR |
| TTCAAACGTCAACTTCTGAT+TGG | 0.384107 | 2_1:+73920036 | Msa0224150:CDS |
| CATTATCAATATCATTAAAC+TGG | 0.385947 | 2_1:+73918608 | Msa0224150:CDS |
| TCATCGAATTCGATAGGGTT+AGG | 0.387109 | 2_1:-73917357 | None:intergenic |
| ATTGAAATCAGCTATTGAAT+TGG | 0.387679 | 2_1:-73920202 | None:intergenic |
| AAAGCTTCTTGTAATTTCTT+GGG | 0.388567 | 2_1:+73920315 | Msa0224150:three_prime_UTR |
| TTCCCCTTTCTTCATTTCTA+GGG | 0.392444 | 2_1:+73917139 | Msa0224150:five_prime_UTR |
| GAGAAGTGCTTCTTGAAGAT+TGG | 0.399004 | 2_1:-73917259 | None:intergenic |
| CTGGGGTTGTTGCTGGAGCT+AGG | 0.415674 | 2_1:+73918560 | Msa0224150:CDS |
| TGGGGTTGTTGCTGGAGCTA+GGG | 0.421199 | 2_1:+73918561 | Msa0224150:CDS |
| CTGTTTGTGAGCAAGATAAT+GGG | 0.422044 | 2_1:-73917387 | None:intergenic |
| GGTCTTCAGTTTGCACAGCT+TGG | 0.423296 | 2_1:+73919163 | Msa0224150:CDS |
| TGAAGATTGGAAACGAGGCC+CGG | 0.439122 | 2_1:-73917246 | None:intergenic |
| TCTTCCAGATAGTTAAACTT+TGG | 0.439867 | 2_1:+73920423 | Msa0224150:three_prime_UTR |
| TGTGAGCAAGATAATGGGTT+TGG | 0.440916 | 2_1:-73917382 | None:intergenic |
| AAGTCAAGAAACTGATTTCA+AGG | 0.442158 | 2_1:+73918723 | Msa0224150:CDS |
| AGAAATAGATGACGATGATC+TGG | 0.446591 | 2_1:+73919784 | Msa0224150:CDS |
| GAAGATTGGAAACGAGGCCC+GGG | 0.453439 | 2_1:-73917245 | None:intergenic |
| TTTAATGATATTGATAATGA+TGG | 0.457599 | 2_1:-73918604 | None:intergenic |
| ATTGAATCAACTGGAGCTGC+AGG | 0.468057 | 2_1:+73919369 | Msa0224150:CDS |
| GATATTACAAACAGACCAAA+TGG | 0.470062 | 2_1:-73920355 | None:intergenic |
| AATGCTCCAGGTTCTACTCT+GGG | 0.470332 | 2_1:+73918542 | Msa0224150:intron |
| AAACCCTAGAAATGAAGAAA+GGG | 0.471301 | 2_1:-73917142 | None:intergenic |
| AAATGCTCCAGGTTCTACTC+TGG | 0.471886 | 2_1:+73918541 | Msa0224150:intron |
| AGCTATCAGGGATGCTGAAA+AGG | 0.478095 | 2_1:+73918780 | Msa0224150:CDS |
| TGTGGAGATCCACTCCAAAC+TGG | 0.479831 | 2_1:+73919077 | Msa0224150:CDS |
| TCAAATAGCCGCTATCCAAC+TGG | 0.485041 | 2_1:+73919109 | Msa0224150:CDS |
| TCCACGTACACCGTTAGAAC+CGG | 0.490654 | 2_1:+73917036 | Msa0224150:five_prime_UTR |
| ACCAAGGCCACCTTGTGGAT+TGG | 0.492533 | 2_1:-73919143 | None:intergenic |
| TCGTTTCAAGATGATGCCCC+CGG | 0.496104 | 2_1:+73917227 | Msa0224150:exon |
| AGGATTAGGGTTATCATCGT+TGG | 0.497932 | 2_1:-73917337 | None:intergenic |
| TTGTTCAGGGCGCAGCTCGT+CGG | 0.499499 | 2_1:+73919316 | Msa0224150:intron |
| AAAACCCTAGAAATGAAGAA+AGG | 0.500295 | 2_1:-73917143 | None:intergenic |
| CGCAAACATGGACATTGTAA+AGG | 0.507879 | 2_1:-73917467 | None:intergenic |
| TTGGATTCATCGAATTCGAT+AGG | 0.510175 | 2_1:-73917363 | None:intergenic |
| TGAATATCACTCTCAATATG+AGG | 0.515335 | 2_1:-73920017 | None:intergenic |
| ATCATCGTTGGTGGAAGAAA+CGG | 0.515938 | 2_1:-73917325 | None:intergenic |
| TTGTTGCTCAAAGGTGATCT+CGG | 0.524280 | 2_1:-73918841 | None:intergenic |
| TTTGATTCATCTTGTTGTGA+AGG | 0.524748 | 2_1:-73917297 | None:intergenic |
| ATTAGGGTTATCATCGTTGG+TGG | 0.527462 | 2_1:-73917334 | None:intergenic |
| AGGAACTGAAACAATGAAGA+AGG | 0.531500 | 2_1:-73920260 | None:intergenic |
| AAGCAAAGATGGAGCAGAAG+TGG | 0.533404 | 2_1:+73920167 | Msa0224150:three_prime_UTR |
| TTACAGACCTTGTTGCTCAA+AGG | 0.534339 | 2_1:-73918850 | None:intergenic |
| GGTTGTTGCTGGAGCTAGGG+AGG | 0.535432 | 2_1:+73918564 | Msa0224150:CDS |
| GTTGATAAATGCAGCTATCA+GGG | 0.535579 | 2_1:+73918768 | Msa0224150:CDS |
| TTGAGCAGAACAAGCTTCCA+CGG | 0.545035 | 2_1:-73917664 | None:intergenic |
| TCAGGGCGCAGCTCGTCGGT+TGG | 0.546235 | 2_1:+73919320 | Msa0224150:intron |
| AGATGAGATGATAGATAGAC+CGG | 0.547804 | 2_1:-73917055 | None:intergenic |
| GAAGAACGAGAGCTTCAACT+AGG | 0.548339 | 2_1:-73917440 | None:intergenic |
| ATATGAGGAGAAAGAGATAC+CGG | 0.550193 | 2_1:-73920002 | None:intergenic |
| TGGATTCATCGAATTCGATA+GGG | 0.554963 | 2_1:-73917362 | None:intergenic |
| GATTACAGAGCACTTGAAAG+TGG | 0.567031 | 2_1:+73919806 | Msa0224150:CDS |
| ATTTCTGCTGTGATTCCTGG+TGG | 0.569344 | 2_1:+73920059 | Msa0224150:CDS |
| GCCAATGAAACACAATCCGC+AGG | 0.578293 | 2_1:-73917864 | None:intergenic |
| GATAGATAGACCGGTTCTAA+CGG | 0.581569 | 2_1:-73917046 | None:intergenic |
| AAGATTGGAAACGAGGCCCG+GGG | 0.581766 | 2_1:-73917244 | None:intergenic |
| CATTTCTTGGCCAATCCACA+AGG | 0.583050 | 2_1:+73919133 | Msa0224150:CDS |
| AATTGACTAAGCAAAGTATG+TGG | 0.583954 | 2_1:+73919059 | Msa0224150:CDS |
| GAAACAGGTTGCAGTGACTC+CGG | 0.585349 | 2_1:+73919983 | Msa0224150:intron |
| CAAATCAAGAAATAACTAAG+TGG | 0.588283 | 2_1:-73920287 | None:intergenic |
| ACGATTGAGGAACGCAAACA+TGG | 0.602918 | 2_1:-73917479 | None:intergenic |
| ACCGGTTCTAACGGTGTACG+TGG | 0.602932 | 2_1:-73917037 | None:intergenic |
| CTTCTTGAAGATTGGAAACG+AGG | 0.607887 | 2_1:-73917251 | None:intergenic |
| AGAAATAACTAAGTGGCCAA+AGG | 0.608629 | 2_1:-73920280 | None:intergenic |
| CTGATAGCTGCATTTATCAA+CGG | 0.609132 | 2_1:-73918766 | None:intergenic |
| ACCTGAAATCTCAAAAGCAG+TGG | 0.609300 | 2_1:-73917697 | None:intergenic |
| AACAGCTAACCAGTTTGGAG+TGG | 0.612572 | 2_1:-73919086 | None:intergenic |
| ATCTTGCTCACAAACAGCGA+TGG | 0.615557 | 2_1:+73917393 | Msa0224150:CDS |
| TTGGCCAAGAAATGACCAGT+TGG | 0.621148 | 2_1:-73919124 | None:intergenic |
| TAGGATACTTACAGCTGCAG+AGG | 0.621441 | 2_1:-73919194 | None:intergenic |
| AACCCTAGAAATGAAGAAAG+GGG | 0.628453 | 2_1:-73917141 | None:intergenic |
| TTACAGCTGCAGAGGCATCT+CGG | 0.632794 | 2_1:-73919186 | None:intergenic |
| GAGATCACCTTTGAGCAACA+AGG | 0.634652 | 2_1:+73918843 | Msa0224150:CDS |
| AGCGATGGAGTTGAATCACC+AGG | 0.636526 | 2_1:+73917408 | Msa0224150:CDS |
| TAATAATTCAGGGACTCCTG+CGG | 0.636885 | 2_1:+73917848 | Msa0224150:intron |
| TCAACTAGGTGTGTAAGACC+TGG | 0.638164 | 2_1:-73917426 | None:intergenic |
| AGAAATGACCAGTTGGATAG+CGG | 0.646911 | 2_1:-73919117 | None:intergenic |
| GAAGAAATACTTCAGACTAG+AGG | 0.658962 | 2_1:+73919413 | Msa0224150:CDS |
| ATGCTCCAGGTTCTACTCTG+GGG | 0.670311 | 2_1:+73918543 | Msa0224150:intron |
| TTCTTGGCCAATCCACAAGG+TGG | 0.682503 | 2_1:+73919136 | Msa0224150:CDS |
| TGTTACGATTCGAGAAACCG+TGG | 0.686133 | 2_1:+73917647 | Msa0224150:CDS |
| TGAAGACCAAGGCCACCTTG+TGG | 0.695105 | 2_1:-73919148 | None:intergenic |
| GCTAGGGAGGCATTATTATG+CGG | 0.703521 | 2_1:+73918577 | Msa0224150:CDS |
| GCTGTGCAAACTGAAGACCA+AGG | 0.760862 | 2_1:-73919159 | None:intergenic |
| AGATTGGAAACGAGGCCCGG+GGG | 0.763136 | 2_1:-73917243 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTTGATTTTTTTGT+TGG | + | chr2_1:73917539-73917558 | Msa0224150:intron | 10.0% |
| !!! | TAAATCAAATTTTTGTTTTT+TGG | + | chr2_1:73917744-73917763 | Msa0224150:intron | 10.0% |
| !!! | AAATCAAATTTTTGTTTTTT+GGG | + | chr2_1:73917745-73917764 | Msa0224150:intron | 10.0% |
| !! | TTAGTAATTTATAATAATTC+AGG | + | chr2_1:73917837-73917856 | Msa0224150:intron | 10.0% |
| !! | TAGTAATTTATAATAATTCA+GGG | + | chr2_1:73917838-73917857 | Msa0224150:intron | 10.0% |
| !!! | AATCAAATTTTTGTTTTTTG+GGG | + | chr2_1:73917746-73917765 | Msa0224150:intron | 15.0% |
| !!! | TTTAATGATATTGATAATGA+TGG | - | chr2_1:73918607-73918626 | None:intergenic | 15.0% |
| !! | TGAAGAAAGAAAATTGAAAT+TGG | - | chr2_1:73917098-73917117 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTTGTTTTTTGG+GGG | + | chr2_1:73917747-73917766 | Msa0224150:intron | 20.0% |
| !!! | TGATTATGTAAAATTGATTC+TGG | + | chr2_1:73918005-73918024 | Msa0224150:intron | 20.0% |
| !!! | TCAAGTTAGAATAATTTTGA+AGG | + | chr2_1:73918148-73918167 | Msa0224150:intron | 20.0% |
| !! | CATTATCAATATCATTAAAC+TGG | + | chr2_1:73918608-73918627 | Msa0224150:CDS | 20.0% |
| !! | TTTCATTAGAGATTATGAAT+TGG | + | chr2_1:73918668-73918687 | Msa0224150:intron | 20.0% |
| !! | TATATCATGTTATAGGAAAA+AGG | + | chr2_1:73918696-73918715 | Msa0224150:intron | 20.0% |
| !!! | ATATTCAGAAAGCAATTTTT+GGG | - | chr2_1:73918814-73918833 | None:intergenic | 20.0% |
| !!! | AATATTCAGAAAGCAATTTT+TGG | - | chr2_1:73918815-73918834 | None:intergenic | 20.0% |
| !! | GAACAGATTAATAATCTAAA+AGG | - | chr2_1:73919647-73919666 | None:intergenic | 20.0% |
| !! | ATTTTTGTTAGTTGCTGAAA+TGG | + | chr2_1:73917589-73917608 | Msa0224150:intron | 25.0% |
| ! | TAATAAATGCTAACCAAAAC+AGG | - | chr2_1:73917921-73917940 | None:intergenic | 25.0% |
| ! | CAAACACACAATTAATTTAC+GGG | - | chr2_1:73917951-73917970 | None:intergenic | 25.0% |
| ! | CCAAACACACAATTAATTTA+CGG | - | chr2_1:73917952-73917971 | None:intergenic | 25.0% |
| !!! | CTATACTCTAGAATCAATTT+TGG | + | chr2_1:73918217-73918236 | Msa0224150:intron | 25.0% |
| !!! | TTTGAATTTCAGGTTATTAG+TGG | + | chr2_1:73918302-73918321 | Msa0224150:intron | 25.0% |
| !!! | TTGAATTTCAGGTTATTAGT+GGG | + | chr2_1:73918303-73918322 | Msa0224150:intron | 25.0% |
| !!! | ATAAATCTGAGTTCTGAAAT+TGG | + | chr2_1:73918392-73918411 | Msa0224150:intron | 25.0% |
| ! | GAATATTACAAGACAGAAAA+TGG | - | chr2_1:73918433-73918452 | None:intergenic | 25.0% |
| ! | AAACACAAATCTCTATAACA+AGG | - | chr2_1:73918508-73918527 | None:intergenic | 25.0% |
| ! | ATATCATTAAACTGGTAAGT+TGG | + | chr2_1:73918616-73918635 | Msa0224150:intron | 25.0% |
| ! | GGTATCATATATCATGTTAT+AGG | + | chr2_1:73918689-73918708 | Msa0224150:intron | 25.0% |
| !! | GAAGTATTTCTTCACTTTAT+TGG | - | chr2_1:73919406-73919425 | None:intergenic | 25.0% |
| ! | AACACATAATGTTGTATGAA+GGG | - | chr2_1:73919669-73919688 | None:intergenic | 25.0% |
| ! | TAACACATAATGTTGTATGA+AGG | - | chr2_1:73919670-73919689 | None:intergenic | 25.0% |
| ! | ACTATATTGTATGTTCTTGA+TGG | + | chr2_1:73919882-73919901 | Msa0224150:intron | 25.0% |
| !! | TCTTGATGGTAATATCTTTA+TGG | + | chr2_1:73919896-73919915 | Msa0224150:intron | 25.0% |
| !! | CTTGATGGTAATATCTTTAT+GGG | + | chr2_1:73919897-73919916 | Msa0224150:intron | 25.0% |
| ! | ATTGAAATCAGCTATTGAAT+TGG | - | chr2_1:73920205-73920224 | None:intergenic | 25.0% |
| ! | CAAATCAAGAAATAACTAAG+TGG | - | chr2_1:73920290-73920309 | None:intergenic | 25.0% |
| ! | AAAAGCTTCTTGTAATTTCT+TGG | + | chr2_1:73920314-73920333 | Msa0224150:three_prime_UTR | 25.0% |
| ! | AAAGCTTCTTGTAATTTCTT+GGG | + | chr2_1:73920315-73920334 | Msa0224150:three_prime_UTR | 25.0% |
| !!! | TGTTTTAGAAAAATGCCATT+TGG | + | chr2_1:73920340-73920359 | Msa0224150:three_prime_UTR | 25.0% |
| ! | TTTATTGAAATGTGCTCTAA+TGG | + | chr2_1:73920454-73920473 | Msa0224150:three_prime_UTR | 25.0% |
| AAACCCTAGAAATGAAGAAA+GGG | - | chr2_1:73917145-73917164 | None:intergenic | 30.0% | |
| AAAACCCTAGAAATGAAGAA+AGG | - | chr2_1:73917146-73917165 | None:intergenic | 30.0% | |
| ! | TTTGATTCATCTTGTTGTGA+AGG | - | chr2_1:73917300-73917319 | None:intergenic | 30.0% |
| TTTAGGGATAAATCTGTTTC+TGG | + | chr2_1:73917618-73917637 | Msa0224150:intron | 30.0% | |
| CCGTAAATTAATTGTGTGTT+TGG | + | chr2_1:73917949-73917968 | Msa0224150:intron | 30.0% | |
| TCTAACTTGAAGCTAGAATT+TGG | - | chr2_1:73918138-73918157 | None:intergenic | 30.0% | |
| CATGATGTGATTTGAATTTC+AGG | + | chr2_1:73918292-73918311 | Msa0224150:intron | 30.0% | |
| AGGTTATTAGTGGGATTAAT+CGG | + | chr2_1:73918312-73918331 | Msa0224150:intron | 30.0% | |
| ACATGTAAGTTGCTAACTTA+TGG | + | chr2_1:73918354-73918373 | Msa0224150:intron | 30.0% | |
| TAAGTTGCTAACTTATGGTT+AGG | + | chr2_1:73918359-73918378 | Msa0224150:intron | 30.0% | |
| AAGTTGCTAACTTATGGTTA+GGG | + | chr2_1:73918360-73918379 | Msa0224150:intron | 30.0% | |
| TATAACAAGGCTGCAAATTA+TGG | - | chr2_1:73918495-73918514 | None:intergenic | 30.0% | |
| ! | AAGTCAAGAAACTGATTTCA+AGG | + | chr2_1:73918723-73918742 | Msa0224150:CDS | 30.0% |
| CACAATGCAGTAAAACATAT+GGG | - | chr2_1:73918911-73918930 | None:intergenic | 30.0% | |
| TCTTTCAATTGTACAAACTC+TGG | + | chr2_1:73918955-73918974 | Msa0224150:intron | 30.0% | |
| AATTGACTAAGCAAAGTATG+TGG | + | chr2_1:73919059-73919078 | Msa0224150:CDS | 30.0% | |
| CACATGTTTGTATGTAATGT+AGG | - | chr2_1:73919216-73919235 | None:intergenic | 30.0% | |
| ! | TGATGTTTTCTGTCTATTCT+TGG | + | chr2_1:73919242-73919261 | Msa0224150:intron | 30.0% |
| ! | GATGTTTTCTGTCTATTCTT+GGG | + | chr2_1:73919243-73919262 | Msa0224150:intron | 30.0% |
| !! | TTGAATCCATGTTTTGTTCA+GGG | + | chr2_1:73919303-73919322 | Msa0224150:intron | 30.0% |
| TTGGAGATTATTGAATCAAC+TGG | + | chr2_1:73919360-73919379 | Msa0224150:CDS | 30.0% | |
| TTCTTCACTTTATTGGTATC+AGG | - | chr2_1:73919399-73919418 | None:intergenic | 30.0% | |
| GTACAGAAGATAACAATTTG+TGG | + | chr2_1:73919542-73919561 | Msa0224150:intron | 30.0% | |
| AGATAACAATTTGTGGAGAA+TGG | + | chr2_1:73919549-73919568 | Msa0224150:intron | 30.0% | |
| TGAATATCACTCTCAATATG+AGG | - | chr2_1:73920020-73920039 | None:intergenic | 30.0% | |
| !!! | TTTTTAATTTACTGTCCACC+AGG | - | chr2_1:73920077-73920096 | None:intergenic | 30.0% |
| TTTCTTCCTTAAAGCAAAGA+TGG | + | chr2_1:73920156-73920175 | Msa0224150:three_prime_UTR | 30.0% | |
| GATATTACAAACAGACCAAA+TGG | - | chr2_1:73920358-73920377 | None:intergenic | 30.0% | |
| ATCTATTGCTAGCAAAAAAC+TGG | + | chr2_1:73920375-73920394 | Msa0224150:three_prime_UTR | 30.0% | |
| TCTTCCAGATAGTTAAACTT+TGG | + | chr2_1:73920423-73920442 | Msa0224150:three_prime_UTR | 30.0% | |
| CAATCCAAAGTTTAACTATC+TGG | - | chr2_1:73920430-73920449 | None:intergenic | 30.0% | |
| AGATGAGATGATAGATAGAC+CGG | - | chr2_1:73917058-73917077 | None:intergenic | 35.0% | |
| GAAATGAAGAAAGGGGAAAA+AGG | - | chr2_1:73917137-73917156 | None:intergenic | 35.0% | |
| TTTCCCCTTTCTTCATTTCT+AGG | + | chr2_1:73917138-73917157 | Msa0224150:five_prime_UTR | 35.0% | |
| TTCCCCTTTCTTCATTTCTA+GGG | + | chr2_1:73917139-73917158 | Msa0224150:five_prime_UTR | 35.0% | |
| AACCCTAGAAATGAAGAAAG+GGG | - | chr2_1:73917144-73917163 | None:intergenic | 35.0% | |
| ATTCGATAGGGTTAGGATTA+GGG | - | chr2_1:73917353-73917372 | None:intergenic | 35.0% | |
| AATTCGATAGGGTTAGGATT+AGG | - | chr2_1:73917354-73917373 | None:intergenic | 35.0% | |
| TGGATTCATCGAATTCGATA+GGG | - | chr2_1:73917365-73917384 | None:intergenic | 35.0% | |
| TTGGATTCATCGAATTCGAT+AGG | - | chr2_1:73917366-73917385 | None:intergenic | 35.0% | |
| CTGTTTGTGAGCAAGATAAT+GGG | - | chr2_1:73917390-73917409 | None:intergenic | 35.0% | |
| AAAAAAAGAACGCACGATTG+AGG | - | chr2_1:73917495-73917514 | None:intergenic | 35.0% | |
| !! | TGTGTTTCATTGGCTTTATC+TGG | + | chr2_1:73917873-73917892 | Msa0224150:CDS | 35.0% |
| ! | TATGTGTGGTTTAACTTCTG+GGG | - | chr2_1:73918246-73918265 | None:intergenic | 35.0% |
| ! | GTATGTGTGGTTTAACTTCT+GGG | - | chr2_1:73918247-73918266 | None:intergenic | 35.0% |
| ! | TGTATGTGTGGTTTAACTTC+TGG | - | chr2_1:73918248-73918267 | None:intergenic | 35.0% |
| GGTTATTAGTGGGATTAATC+GGG | + | chr2_1:73918313-73918332 | Msa0224150:intron | 35.0% | |
| GTTATTAGTGGGATTAATCG+GGG | + | chr2_1:73918314-73918333 | Msa0224150:intron | 35.0% | |
| !! | AGTTGGTGATTCTATACATC+TGG | + | chr2_1:73918633-73918652 | Msa0224150:intron | 35.0% |
| CTGATAGCTGCATTTATCAA+CGG | - | chr2_1:73918769-73918788 | None:intergenic | 35.0% | |
| ! | GTTGATAAATGCAGCTATCA+GGG | + | chr2_1:73918768-73918787 | Msa0224150:CDS | 35.0% |
| GCACAATGCAGTAAAACATA+TGG | - | chr2_1:73918912-73918931 | None:intergenic | 35.0% | |
| GTACAAACTCTGGTATTCTA+AGG | + | chr2_1:73918965-73918984 | Msa0224150:intron | 35.0% | |
| ! | AGTGGTATCCTTTTATTGAC+AGG | + | chr2_1:73919030-73919049 | Msa0224150:intron | 35.0% |
| ! | GTGGTATCCTTTTATTGACA+GGG | + | chr2_1:73919031-73919050 | Msa0224150:intron | 35.0% |
| ! | TTTGAAGCCCTGTCAATAAA+AGG | - | chr2_1:73919041-73919060 | None:intergenic | 35.0% |
| ! | TTTGAAACAGCTAACCAGTT+TGG | - | chr2_1:73919094-73919113 | None:intergenic | 35.0% |
| !! | CTTGAATCCATGTTTTGTTC+AGG | + | chr2_1:73919302-73919321 | Msa0224150:intron | 35.0% |
| GAAGAAATACTTCAGACTAG+AGG | + | chr2_1:73919413-73919432 | Msa0224150:CDS | 35.0% | |
| ACTTCAGACTAGAGGTAAAT+AGG | + | chr2_1:73919421-73919440 | Msa0224150:intron | 35.0% | |
| GCAAAGAACAGTATAACTCA+TGG | - | chr2_1:73919625-73919644 | None:intergenic | 35.0% | |
| ! | CTACTTGTACCTTCAGTTTT+TGG | + | chr2_1:73919748-73919767 | Msa0224150:intron | 35.0% |
| AGAAATAGATGACGATGATC+TGG | + | chr2_1:73919784-73919803 | Msa0224150:CDS | 35.0% | |
| ATATGAGGAGAAAGAGATAC+CGG | - | chr2_1:73920005-73920024 | None:intergenic | 35.0% | |
| TTCAAACGTCAACTTCTGAT+TGG | + | chr2_1:73920036-73920055 | Msa0224150:CDS | 35.0% | |
| AGGAACTGAAACAATGAAGA+AGG | - | chr2_1:73920263-73920282 | None:intergenic | 35.0% | |
| CTTCATTGTTTCAGTTCCTT+TGG | + | chr2_1:73920264-73920283 | Msa0224150:three_prime_UTR | 35.0% | |
| AGAAATAACTAAGTGGCCAA+AGG | - | chr2_1:73920283-73920302 | None:intergenic | 35.0% | |
| ! | GATAGATAGACCGGTTCTAA+CGG | - | chr2_1:73917049-73917068 | None:intergenic | 40.0% |
| CTTCTTGAAGATTGGAAACG+AGG | - | chr2_1:73917254-73917273 | None:intergenic | 40.0% | |
| !! | GAGAAGTGCTTCTTGAAGAT+TGG | - | chr2_1:73917262-73917281 | None:intergenic | 40.0% |
| ! | ATCATCGTTGGTGGAAGAAA+CGG | - | chr2_1:73917328-73917347 | None:intergenic | 40.0% |
| ATTAGGGTTATCATCGTTGG+TGG | - | chr2_1:73917337-73917356 | None:intergenic | 40.0% | |
| AGGATTAGGGTTATCATCGT+TGG | - | chr2_1:73917340-73917359 | None:intergenic | 40.0% | |
| TCATCGAATTCGATAGGGTT+AGG | - | chr2_1:73917360-73917379 | None:intergenic | 40.0% | |
| !! | TGTGAGCAAGATAATGGGTT+TGG | - | chr2_1:73917385-73917404 | None:intergenic | 40.0% |
| GCTGTTTGTGAGCAAGATAA+TGG | - | chr2_1:73917391-73917410 | None:intergenic | 40.0% | |
| CGCAAACATGGACATTGTAA+AGG | - | chr2_1:73917470-73917489 | None:intergenic | 40.0% | |
| !! | TGCTGAAATGGTGTTGCTTT+AGG | + | chr2_1:73917601-73917620 | Msa0224150:intron | 40.0% |
| !! | GCTGAAATGGTGTTGCTTTA+GGG | + | chr2_1:73917602-73917621 | Msa0224150:intron | 40.0% |
| GCTTGTTCTGCTCAAGTTAA+TGG | + | chr2_1:73917672-73917691 | Msa0224150:CDS | 40.0% | |
| ACCTGAAATCTCAAAAGCAG+TGG | - | chr2_1:73917700-73917719 | None:intergenic | 40.0% | |
| TAATAATTCAGGGACTCCTG+CGG | + | chr2_1:73917848-73917867 | Msa0224150:intron | 40.0% | |
| !!! | TATCTGGAGCTTTGTTTTCG+TGG | + | chr2_1:73917889-73917908 | Msa0224150:intron | 40.0% |
| TAATTGTGTGTTTGGTCCTG+CGG | + | chr2_1:73917957-73917976 | Msa0224150:intron | 40.0% | |
| AAATCAACTCTTGTTACCGC+AGG | - | chr2_1:73917976-73917995 | None:intergenic | 40.0% | |
| ! | CAACTTGCTTTCACACATGA+AGG | - | chr2_1:73918071-73918090 | None:intergenic | 40.0% |
| CAGCACTATTAGTGTATGTG+TGG | - | chr2_1:73918260-73918279 | None:intergenic | 40.0% | |
| !!! | ACCTGGAGCATTTTAAAGCA+TGG | - | chr2_1:73918534-73918553 | None:intergenic | 40.0% |
| ! | CGTTGATAAATGCAGCTATC+AGG | + | chr2_1:73918767-73918786 | Msa0224150:CDS | 40.0% |
| TTGTTGCTCAAAGGTGATCT+CGG | - | chr2_1:73918844-73918863 | None:intergenic | 40.0% | |
| TTACAGACCTTGTTGCTCAA+AGG | - | chr2_1:73918853-73918872 | None:intergenic | 40.0% | |
| ! | TGCAAATGCTCTAGTCTTCT+AGG | + | chr2_1:73918929-73918948 | Msa0224150:intron | 40.0% |
| !! | TTCTAAGGCGTTTGGCTAAT+TGG | + | chr2_1:73918980-73918999 | Msa0224150:intron | 40.0% |
| TCAATTGTACACTGATGCAG+TGG | + | chr2_1:73919012-73919031 | Msa0224150:intron | 40.0% | |
| AGAAATGACCAGTTGGATAG+CGG | - | chr2_1:73919120-73919139 | None:intergenic | 40.0% | |
| CTATCCAACTGGTCATTTCT+TGG | + | chr2_1:73919120-73919139 | Msa0224150:CDS | 40.0% | |
| GGCTACGCAGAAAAAGAATT+TGG | + | chr2_1:73919341-73919360 | Msa0224150:CDS | 40.0% | |
| TCAGACTAGAGGTAAATAGG+AGG | + | chr2_1:73919424-73919443 | Msa0224150:intron | 40.0% | |
| ! | GATTACAGAGCACTTGAAAG+TGG | + | chr2_1:73919806-73919825 | Msa0224150:CDS | 40.0% |
| TGAATCCGTCAGAATGAGAA+GGG | - | chr2_1:73919948-73919967 | None:intergenic | 40.0% | |
| ATGAATCCGTCAGAATGAGA+AGG | - | chr2_1:73919949-73919968 | None:intergenic | 40.0% | |
| TCTGCTCCATCTTTGCTTTA+AGG | - | chr2_1:73920165-73920184 | None:intergenic | 40.0% | |
| ATCTTGCTCACAAACAGCGA+TGG | + | chr2_1:73917393-73917412 | Msa0224150:CDS | 45.0% | |
| TCAACTAGGTGTGTAAGACC+TGG | - | chr2_1:73917429-73917448 | None:intergenic | 45.0% | |
| GAAGAACGAGAGCTTCAACT+AGG | - | chr2_1:73917443-73917462 | None:intergenic | 45.0% | |
| ACGATTGAGGAACGCAAACA+TGG | - | chr2_1:73917482-73917501 | None:intergenic | 45.0% | |
| TGTTACGATTCGAGAAACCG+TGG | + | chr2_1:73917647-73917666 | Msa0224150:CDS | 45.0% | |
| TTGAGCAGAACAAGCTTCCA+CGG | - | chr2_1:73917667-73917686 | None:intergenic | 45.0% | |
| !!! | GCCACTGCTTTTGAGATTTC+AGG | + | chr2_1:73917696-73917715 | Msa0224150:CDS | 45.0% |
| ! | TCCTGCGGATTGTGTTTCAT+TGG | + | chr2_1:73917863-73917882 | Msa0224150:CDS | 45.0% |
| ! | TTCGTGGTCAAAGCCTGTTT+TGG | + | chr2_1:73917905-73917924 | Msa0224150:intron | 45.0% |
| ATTAATCGGGGATCAAGCTG+CGG | + | chr2_1:73918326-73918345 | Msa0224150:intron | 45.0% | |
| !! | GCCATGCTTTAAAATGCTCC+AGG | + | chr2_1:73918530-73918549 | Msa0224150:intron | 45.0% |
| AAATGCTCCAGGTTCTACTC+TGG | + | chr2_1:73918541-73918560 | Msa0224150:intron | 45.0% | |
| AATGCTCCAGGTTCTACTCT+GGG | + | chr2_1:73918542-73918561 | Msa0224150:intron | 45.0% | |
| !! | GCTAGGGAGGCATTATTATG+CGG | + | chr2_1:73918577-73918596 | Msa0224150:CDS | 45.0% |
| AGCTATCAGGGATGCTGAAA+AGG | + | chr2_1:73918780-73918799 | Msa0224150:CDS | 45.0% | |
| GAGATCACCTTTGAGCAACA+AGG | + | chr2_1:73918843-73918862 | Msa0224150:CDS | 45.0% | |
| !! | CTCTGGTATTCTAAGGCGTT+TGG | + | chr2_1:73918972-73918991 | Msa0224150:intron | 45.0% |
| AACAGCTAACCAGTTTGGAG+TGG | - | chr2_1:73919089-73919108 | None:intergenic | 45.0% | |
| TCAAATAGCCGCTATCCAAC+TGG | + | chr2_1:73919109-73919128 | Msa0224150:CDS | 45.0% | |
| TTGGCCAAGAAATGACCAGT+TGG | - | chr2_1:73919127-73919146 | None:intergenic | 45.0% | |
| CATTTCTTGGCCAATCCACA+AGG | + | chr2_1:73919133-73919152 | Msa0224150:CDS | 45.0% | |
| TAGGATACTTACAGCTGCAG+AGG | - | chr2_1:73919197-73919216 | None:intergenic | 45.0% | |
| ATTGAATCAACTGGAGCTGC+AGG | + | chr2_1:73919369-73919388 | Msa0224150:CDS | 45.0% | |
| GACTAGAGGTAAATAGGAGG+TGG | + | chr2_1:73919427-73919446 | Msa0224150:intron | 45.0% | |
| TAGAGGTAAATAGGAGGTGG+AGG | + | chr2_1:73919430-73919449 | Msa0224150:intron | 45.0% | |
| GCTGCTTGTCCAAAAACTGA+AGG | - | chr2_1:73919760-73919779 | None:intergenic | 45.0% | |
| !! | TCAGTTTTTGGACAAGCAGC+AGG | + | chr2_1:73919760-73919779 | Msa0224150:intron | 45.0% |
| GAATGAGAAGGGGGGAAAAT+TGG | - | chr2_1:73919937-73919956 | None:intergenic | 45.0% | |
| AATCCGTCAGAATGAGAAGG+GGG | - | chr2_1:73919946-73919965 | None:intergenic | 45.0% | |
| GAATCCGTCAGAATGAGAAG+GGG | - | chr2_1:73919947-73919966 | None:intergenic | 45.0% | |
| ACGGATTCATGCATGTGCTT+TGG | + | chr2_1:73919959-73919978 | Msa0224150:intron | 45.0% | |
| !! | TGCATGTGCTTTGGAGAAAC+AGG | + | chr2_1:73919968-73919987 | Msa0224150:intron | 45.0% |
| TGGATTTCTGCTGTGATTCC+TGG | + | chr2_1:73920056-73920075 | Msa0224150:CDS | 45.0% | |
| ATTTCTGCTGTGATTCCTGG+TGG | + | chr2_1:73920059-73920078 | Msa0224150:CDS | 45.0% | |
| AAGCAAAGATGGAGCAGAAG+TGG | + | chr2_1:73920167-73920186 | Msa0224150:three_prime_UTR | 45.0% | |
| TCCACGTACACCGTTAGAAC+CGG | + | chr2_1:73917036-73917055 | Msa0224150:five_prime_UTR | 50.0% | |
| TCGTTTCAAGATGATGCCCC+CGG | + | chr2_1:73917227-73917246 | Msa0224150:exon | 50.0% | |
| TGAAGATTGGAAACGAGGCC+CGG | - | chr2_1:73917249-73917268 | None:intergenic | 50.0% | |
| AGCGATGGAGTTGAATCACC+AGG | + | chr2_1:73917408-73917427 | Msa0224150:CDS | 50.0% | |
| GCCAATGAAACACAATCCGC+AGG | - | chr2_1:73917867-73917886 | None:intergenic | 50.0% | |
| ATGCTCCAGGTTCTACTCTG+GGG | + | chr2_1:73918543-73918562 | Msa0224150:intron | 50.0% | |
| AACAACCCCAGAGTAGAACC+TGG | - | chr2_1:73918551-73918570 | None:intergenic | 50.0% | |
| !! | TTCTACTCTGGGGTTGTTGC+TGG | + | chr2_1:73918553-73918572 | Msa0224150:CDS | 50.0% |
| TGTGGAGATCCACTCCAAAC+TGG | + | chr2_1:73919077-73919096 | Msa0224150:CDS | 50.0% | |
| TTCTTGGCCAATCCACAAGG+TGG | + | chr2_1:73919136-73919155 | Msa0224150:CDS | 50.0% | |
| GCTGTGCAAACTGAAGACCA+AGG | - | chr2_1:73919162-73919181 | None:intergenic | 50.0% | |
| GGTCTTCAGTTTGCACAGCT+TGG | + | chr2_1:73919163-73919182 | Msa0224150:CDS | 50.0% | |
| !! | TTACAGCTGCAGAGGCATCT+CGG | - | chr2_1:73919189-73919208 | None:intergenic | 50.0% |
| AGGTAAATAGGAGGTGGAGG+AGG | + | chr2_1:73919433-73919452 | Msa0224150:intron | 50.0% | |
| TAAATAGGAGGTGGAGGAGG+AGG | + | chr2_1:73919436-73919455 | Msa0224150:intron | 50.0% | |
| TTCCCCCCTTCTCATTCTGA+CGG | + | chr2_1:73919940-73919959 | Msa0224150:intron | 50.0% | |
| ATCCGTCAGAATGAGAAGGG+GGG | - | chr2_1:73919945-73919964 | None:intergenic | 50.0% | |
| GAAACAGGTTGCAGTGACTC+CGG | + | chr2_1:73919983-73920002 | Msa0224150:intron | 50.0% | |
| ! | ACCGGTTCTAACGGTGTACG+TGG | - | chr2_1:73917040-73917059 | None:intergenic | 55.0% |
| CGTTTCAAGATGATGCCCCC+GGG | + | chr2_1:73917228-73917247 | Msa0224150:exon | 55.0% | |
| AAGATTGGAAACGAGGCCCG+GGG | - | chr2_1:73917247-73917266 | None:intergenic | 55.0% | |
| GAAGATTGGAAACGAGGCCC+GGG | - | chr2_1:73917248-73917267 | None:intergenic | 55.0% | |
| TGGGGTTGTTGCTGGAGCTA+GGG | + | chr2_1:73918561-73918580 | Msa0224150:CDS | 55.0% | |
| ACCAAGGCCACCTTGTGGAT+TGG | - | chr2_1:73919146-73919165 | None:intergenic | 55.0% | |
| TGAAGACCAAGGCCACCTTG+TGG | - | chr2_1:73919151-73919170 | None:intergenic | 55.0% | |
| GCTGCGCCCTGAACAAAACA+TGG | - | chr2_1:73919312-73919331 | None:intergenic | 55.0% | |
| AGATTGGAAACGAGGCCCGG+GGG | - | chr2_1:73917246-73917265 | None:intergenic | 60.0% | |
| CTGGGGTTGTTGCTGGAGCT+AGG | + | chr2_1:73918560-73918579 | Msa0224150:CDS | 60.0% | |
| GGTTGTTGCTGGAGCTAGGG+AGG | + | chr2_1:73918564-73918583 | Msa0224150:CDS | 60.0% | |
| GCCAATCCACAAGGTGGCCT+TGG | + | chr2_1:73919142-73919161 | Msa0224150:CDS | 60.0% | |
| TTGTTCAGGGCGCAGCTCGT+CGG | + | chr2_1:73919316-73919335 | Msa0224150:intron | 60.0% | |
| GTGGAGGAGGAGGATGAGGA+GGG | + | chr2_1:73919446-73919465 | Msa0224150:intron | 60.0% | |
| TGGAGGAGGAGGATGAGGAG+GGG | + | chr2_1:73919447-73919466 | Msa0224150:intron | 60.0% | |
| GGAGGTGGAGGAGGAGGATG+AGG | + | chr2_1:73919442-73919461 | Msa0224150:intron | 65.0% | |
| GGTGGAGGAGGAGGATGAGG+AGG | + | chr2_1:73919445-73919464 | Msa0224150:intron | 65.0% | |
| GGAGGAGGAGGATGAGGAGG+GGG | + | chr2_1:73919448-73919467 | Msa0224150:intron | 65.0% | |
| TCAGGGCGCAGCTCGTCGGT+TGG | + | chr2_1:73919320-73919339 | Msa0224150:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73917029 | 73920484 | 73917029 | ID=Msa0224150;Name=Msa0224150 |
| chr2_1 | mRNA | 73917029 | 73920484 | 73917029 | ID=Msa0224150-mRNA-1;Parent=Msa0224150;Name=Msa0224150-mRNA-1;_AED=0.11;_eAED=0.11;_QI=208|0.87|0.88|1|1|1|9|396|354 |
| chr2_1 | exon | 73917029 | 73917499 | 73917029 | ID=Msa0224150-mRNA-1:exon:21772;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73917623 | 73917717 | 73917623 | ID=Msa0224150-mRNA-1:exon:21773;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73917859 | 73917901 | 73917859 | ID=Msa0224150-mRNA-1:exon:21774;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73918552 | 73918629 | 73918552 | ID=Msa0224150-mRNA-1:exon:21775;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73918711 | 73918864 | 73918711 | ID=Msa0224150-mRNA-1:exon:21776;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73919052 | 73919204 | 73919052 | ID=Msa0224150-mRNA-1:exon:21777;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73919324 | 73919434 | 73919324 | ID=Msa0224150-mRNA-1:exon:21778;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73919764 | 73919832 | 73919764 | ID=Msa0224150-mRNA-1:exon:21779;Parent=Msa0224150-mRNA-1 |
| chr2_1 | exon | 73919990 | 73920484 | 73919990 | ID=Msa0224150-mRNA-1:exon:21780;Parent=Msa0224150-mRNA-1 |
| chr2_1 | five_prime_UTR | 73917029 | 73917236 | 73917029 | ID=Msa0224150-mRNA-1:five_prime_utr;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73917237 | 73917499 | 73917237 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73917623 | 73917717 | 73917623 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73917859 | 73917901 | 73917859 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73918552 | 73918629 | 73918552 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73918711 | 73918864 | 73918711 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73919052 | 73919204 | 73919052 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73919324 | 73919434 | 73919324 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73919764 | 73919832 | 73919764 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | CDS | 73919990 | 73920088 | 73919990 | ID=Msa0224150-mRNA-1:cds;Parent=Msa0224150-mRNA-1 |
| chr2_1 | three_prime_UTR | 73920089 | 73920484 | 73920089 | ID=Msa0224150-mRNA-1:three_prime_utr;Parent=Msa0224150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
