AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0288140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288140 MtrunA17_Chr2g0305891 89.267 587 29 5 1 564 1 576 0.0 991
Msa0288140 MtrunA17_Chr4g0040431 35.714 210 110 4 338 524 155 362 2.99e-36 139
Msa0288140 MtrunA17_Chr2g0324811 31.818 264 139 8 320 547 111 369 8.43e-36 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288140 AT5G58000.2 38.776 588 237 22 6 527 17 547 1.49e-94 301
Msa0288140 AT5G58000.1 41.176 476 185 15 92 527 21 441 5.83e-91 288
Msa0288140 AT2G20590.3 34.199 231 128 3 320 527 136 365 2.07e-34 135
Msa0288140 AT2G20590.1 34.426 244 123 4 320 527 136 378 2.12e-34 135
Msa0288140 AT4G28430.1 34.884 215 116 3 336 527 193 406 1.64e-28 119
Msa0288140 AT2G20590.2 35.165 182 103 3 320 487 136 316 3.05e-24 104

Find 146 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGGGTTTGGAGAAATTT+TGG 0.157130 2_3:+32197801 None:intergenic
CTAGACTCTGCAACTTGTTT+TGG 0.174874 2_3:+32197633 None:intergenic
ATATTCATTTGCTTTCATTT+TGG 0.194470 2_3:-32194121 Msa0288140:three_prime_UTR
TGAAAATTTCTTACTTGAAT+TGG 0.195478 2_3:+32197784 None:intergenic
AATTCATCAAATTCATTCTT+TGG 0.223759 2_3:+32198292 None:intergenic
TCATTATTACCTGCAAATTA+AGG 0.229353 2_3:+32197137 None:intergenic
TTTCCTTTGGAAATCTGAAT+TGG 0.240670 2_3:+32198538 None:intergenic
CTTATCTTTCTTGATTGAAT+TGG 0.242851 2_3:+32198454 None:intergenic
GATATGGCCCATTTGTCTTT+AGG 0.252913 2_3:-32198792 Msa0288140:five_prime_UTR
GTGGAAGTTTCATAACTATT+TGG 0.254654 2_3:-32196561 Msa0288140:CDS
TTTCTTCTGTTCTGTTTCAT+TGG 0.258120 2_3:+32197934 None:intergenic
TTGTGTTGTTTCTGTCTAAC+TGG 0.259168 2_3:+32194421 None:intergenic
TCCATTAACCACTTATGATA+TGG 0.269860 2_3:-32198808 Msa0288140:five_prime_UTR
GAAAAGTAAAGTAGTTAAAT+TGG 0.272936 2_3:-32198757 Msa0288140:five_prime_UTR
TCTATAGATCCTTAATTTGC+AGG 0.277885 2_3:-32197146 Msa0288140:intron
GACAAGAATTCATTCAAATA+AGG 0.278389 2_3:+32196749 None:intergenic
ATGAAGAGTGATCAAGTTAA+AGG 0.286954 2_3:-32198673 Msa0288140:CDS
GCCATATCATAAGTGGTTAA+TGG 0.298531 2_3:+32198807 None:intergenic
TCAGCATTTGTGTTTGGAAT+TGG 0.312327 2_3:-32197490 Msa0288140:CDS
TTATCTTTCTTGATTGAATT+GGG 0.312571 2_3:+32198455 None:intergenic
TTTGAATTCCTTCTGATTGT+AGG 0.313483 2_3:+32197830 None:intergenic
TCATTAACATTCTTATTGAT+TGG 0.318213 2_3:+32198370 None:intergenic
CATCTGTTGTTGCTCGCATT+TGG 0.323883 2_3:-32194644 Msa0288140:CDS
ATGAAATGGAAGACTCTTCT+TGG 0.325297 2_3:+32198486 None:intergenic
TGCAATTTGGATGCTGAAAT+TGG 0.325517 2_3:-32196777 Msa0288140:CDS
AAAGAATGAATTTGATGAAT+TGG 0.326310 2_3:-32198290 Msa0288140:CDS
GAAAATTTCTTACTTGAATT+GGG 0.330039 2_3:+32197785 None:intergenic
TAGTTAATAACAAATCCATT+AGG 0.332645 2_3:-32194213 Msa0288140:three_prime_UTR
TTTCTTACTTGAATTGGGTT+TGG 0.336832 2_3:+32197790 None:intergenic
GAATCCTTTCTTGACTTTGT+TGG 0.339840 2_3:+32194387 None:intergenic
TAAGAGAACAAGATGCAATT+TGG 0.344866 2_3:-32196790 Msa0288140:CDS
CCAACATGAACCACTGATTC+AGG 0.347212 2_3:+32198160 None:intergenic
AGTCAAGAAAGGATTCTAAA+AGG 0.352319 2_3:-32194380 Msa0288140:exon
TCTAAAATCCTAAAGACAAA+TGG 0.357727 2_3:+32198784 None:intergenic
ATACTATCAACAACACTATA+TGG 0.360600 2_3:-32194500 Msa0288140:CDS
TAGGCATATTCGGTCTAGTA+TGG 0.366112 2_3:-32194674 Msa0288140:CDS
AGTTAATAACAAATCCATTA+GGG 0.376277 2_3:-32194212 Msa0288140:three_prime_UTR
TTCTATAATTTGCTTTAGAA+AGG 0.387260 2_3:-32198888 Msa0288140:five_prime_UTR
ATCTGTTGTTGCTCGCATTT+GGG 0.390664 2_3:-32194643 Msa0288140:CDS
ACTACAAGAGGGACAGAAAC+TGG 0.394786 2_3:+32197863 None:intergenic
TCAAGATCAGCATTTGTGTT+TGG 0.401200 2_3:-32197496 Msa0288140:CDS
TTCCTTTGGAAATCTGAATT+GGG 0.411037 2_3:+32198539 None:intergenic
AGATTGAGAAGAACCTCAAT+TGG 0.414447 2_3:-32198586 Msa0288140:CDS
TTGAATTCCTTCTGATTGTA+GGG 0.414805 2_3:+32197831 None:intergenic
TTTCATAACTATTTGGAAGA+TGG 0.416263 2_3:-32196554 Msa0288140:CDS
GGTGGGGTGCAATATTCATT+GGG 0.432624 2_3:+32198862 None:intergenic
GAATTTGATGAATTGGATGA+TGG 0.435863 2_3:-32198283 Msa0288140:CDS
AGAAGAGGTGTGGTTGCTGC+AGG 0.437201 2_3:-32198715 Msa0288140:CDS
CATTAGGGTTAAATAGCAAA+AGG 0.437244 2_3:-32194197 Msa0288140:three_prime_UTR
TTGATTCACAGTAACAACTT+TGG 0.439920 2_3:+32198033 None:intergenic
GCTGTGGCTCTAGGCATATT+CGG 0.445263 2_3:-32194684 Msa0288140:CDS
GAGAAGCAATGGAGGTTGGT+GGG 0.447732 2_3:+32198845 None:intergenic
ATTGGGCTTCTTGTATGAAA+TGG 0.447927 2_3:+32198472 None:intergenic
TTTGTGGTGAAATCTCATAT+TGG 0.449339 2_3:+32197901 None:intergenic
TTCGTCGATTTCGGGATGCA+TGG 0.451129 2_3:-32194728 Msa0288140:CDS
AAGGGTGGTGGTGAAGCTGC+AGG 0.452129 2_3:-32198418 Msa0288140:CDS
ATTACCTTCATTGTGGTGCC+AGG 0.462054 2_3:+32196698 None:intergenic
TGGTGGGGTGCAATATTCAT+TGG 0.464915 2_3:+32198861 None:intergenic
GTAACAACTTTGGATTCTGC+TGG 0.465322 2_3:+32198043 None:intergenic
ATTTCTGCAATGTCCTATGT+AGG 0.468181 2_3:-32197195 Msa0288140:CDS
TCTATAATTTGCTTTAGAAA+GGG 0.470426 2_3:-32198887 Msa0288140:five_prime_UTR
CTAAAATCCTAAAGACAAAT+GGG 0.470864 2_3:+32198785 None:intergenic
TTAATGGATAAGAGGCTTGA+AGG 0.471553 2_3:+32198823 None:intergenic
CAAAGTGTTCAAAGCAGAAA+AGG 0.473192 2_3:-32198644 Msa0288140:CDS
ATTTGGAAGATGGCTAAAAT+CGG 0.474250 2_3:-32196544 Msa0288140:intron
TCTCACTTAGAGATTCTAGA+TGG 0.475373 2_3:+32194027 None:intergenic
AGAAGAAGATGAGTAGTAGT+TGG 0.476313 2_3:+32198913 None:intergenic
GAACAAGAAGGAGGAAATGT+TGG 0.478327 2_3:-32198616 Msa0288140:CDS
GTTGTTGCTCGCATTTGGGC+AGG 0.478972 2_3:-32194639 Msa0288140:intron
TTAATGATTCAATTGAATTG+AGG 0.479489 2_3:-32198354 Msa0288140:CDS
GGAGAAGCAATGGAGGTTGG+TGG 0.486706 2_3:+32198844 None:intergenic
ATAAGTGGTTAATGGATAAG+AGG 0.487292 2_3:+32198815 None:intergenic
TATGCATAGCTATAGTTCTC+AGG 0.490438 2_3:-32194251 Msa0288140:three_prime_UTR
GAATGGGTGGAAGATGAAAC+AGG 0.491736 2_3:-32194469 Msa0288140:CDS
ACTATATGGTGAGGGATGAA+TGG 0.492619 2_3:-32194486 Msa0288140:CDS
AGCAAAAGGGAATAATAGCT+TGG 0.504414 2_3:-32194183 Msa0288140:three_prime_UTR
TTAAATTGGTGAATGATCAA+TGG 0.508935 2_3:-32198743 Msa0288140:exon
ATGCAAAGGATATCAATTTG+AGG 0.510644 2_3:-32197441 Msa0288140:intron
TCGTCGATTTCGGGATGCAT+GGG 0.512384 2_3:-32194727 Msa0288140:CDS
GTGAAGCTGCAGGGAAATTG+AGG 0.515270 2_3:-32198408 Msa0288140:CDS
TGCAAATTAAGGATCTATAG+AGG 0.521117 2_3:+32197148 None:intergenic
AAGGAAGAAGAACAAGAAGG+AGG 0.528318 2_3:-32198625 Msa0288140:CDS
GATTGAGAAGAACCTCAATT+GGG 0.529558 2_3:-32198585 Msa0288140:CDS
CTATATGGTGAGGGATGAAT+GGG 0.530924 2_3:-32194485 Msa0288140:CDS
CAAATGGGCCATATCATAAG+TGG 0.539279 2_3:+32198800 None:intergenic
GAATGAATCAGAGAAGAAAG+TGG 0.540310 2_3:-32197960 Msa0288140:CDS
AAGATAGACAAGGCCTACAT+AGG 0.541659 2_3:+32197182 None:intergenic
ATTAGGGTTAAATAGCAAAA+GGG 0.542239 2_3:-32194196 Msa0288140:three_prime_UTR
AATTTGATGAATTGGATGAT+GGG 0.543422 2_3:-32198282 Msa0288140:CDS
TGAATTCCTTCTGATTGTAG+GGG 0.543656 2_3:+32197832 None:intergenic
TCAAAATTCACCTGAATCAG+TGG 0.544044 2_3:-32198170 Msa0288140:CDS
GCTACCAACAAAGTCAAGAA+AGG 0.545347 2_3:-32194391 Msa0288140:CDS
AGAAGCAATGGAGGTTGGTG+GGG 0.548565 2_3:+32198846 None:intergenic
AGCCCAATTCAGATTTCCAA+AGG 0.554864 2_3:-32198541 Msa0288140:CDS
TTCTTGAACTCGATCCAACT+CGG 0.555375 2_3:+32198321 None:intergenic
AGATCCTGGCACCACAATGA+AGG 0.555506 2_3:-32196702 Msa0288140:intron
GAATGAAAGCTTTGATGTGA+AGG 0.555982 2_3:-32198077 Msa0288140:CDS
GATAAGATCTGATATGCAGA+AGG 0.555989 2_3:-32198437 Msa0288140:CDS
CAAAACAAGTTGCAGAGTCT+AGG 0.557021 2_3:-32197632 Msa0288140:intron
TGGTTGCTGCAGGGTCAGTG+TGG 0.558063 2_3:-32198705 Msa0288140:CDS
GAATCAACAAGAAAATGATA+AGG 0.558387 2_3:-32198017 Msa0288140:CDS
TTGGTTCCATCAGAAATGCA+TGG 0.559390 2_3:+32198505 None:intergenic
AGTCTCATCTTCTTATGCAA+AGG 0.559905 2_3:-32197455 Msa0288140:CDS
GAGGCTTGAAGGAGAAGCAA+TGG 0.560335 2_3:+32198834 None:intergenic
GAGGAACCATGCATTTCTGA+TGG 0.565807 2_3:-32198511 Msa0288140:CDS
TGAAACAGAACAGAAGAAAG+TGG 0.569431 2_3:-32197930 Msa0288140:CDS
TGAGAAAGATGAAAATGTTG+AGG 0.571155 2_3:-32198242 Msa0288140:CDS
TTAAATAATTACCTTCATTG+TGG 0.571660 2_3:+32196691 None:intergenic
AAGAGTGATCAAGTTAAAGG+TGG 0.572772 2_3:-32198670 Msa0288140:CDS
GAAGGAGAAGCAATGGAGGT+TGG 0.575606 2_3:+32198841 None:intergenic
GAGGAAGACGAAATCCGAGT+TGG 0.576151 2_3:-32198335 Msa0288140:CDS
GAAAAGGAAGAAGAACAAGA+AGG 0.577819 2_3:-32198628 Msa0288140:CDS
AAGGATTCTAAAAGGATGCA+TGG 0.580634 2_3:-32194372 Msa0288140:exon
TGAGGAAATTGAAATTGAGA+TGG 0.583763 2_3:-32198101 Msa0288140:CDS
GCTTGAAGGAGAAGCAATGG+AGG 0.584962 2_3:+32198837 None:intergenic
GGGGATTGCTTCACTACAAG+AGG 0.585727 2_3:+32197851 None:intergenic
TGGTGAGGTTGAAGATGATG+AGG 0.590184 2_3:-32198119 Msa0288140:CDS
TCTCTTCGAAGACCCAATTG+AGG 0.591007 2_3:+32198573 None:intergenic
AGAATTCATTCAAATAAGGT+AGG 0.591737 2_3:+32196753 None:intergenic
GGTTGCTGCAGGGTCAGTGT+GGG 0.592884 2_3:-32198704 Msa0288140:CDS
GAGTAATTCAAAAGCAAATG+TGG 0.600295 2_3:+32194324 None:intergenic
CCTGAATCAGTGGTTCATGT+TGG 0.600898 2_3:-32198160 Msa0288140:CDS
AAACAGGATGTGATGAAGCA+TGG 0.601103 2_3:-32194453 Msa0288140:CDS
TATGGTGAGGGATGAATGGG+TGG 0.602229 2_3:-32194482 Msa0288140:CDS
GAATCAGTGGTTCATGTTGG+TGG 0.602680 2_3:-32198157 Msa0288140:CDS
ATCAACAACACTATATGGTG+AGG 0.602777 2_3:-32194495 Msa0288140:CDS
CAAGAAGGAGGAAATGTTGG+TGG 0.603269 2_3:-32198613 Msa0288140:CDS
GATATCAAGCAATGTTGATG+TGG 0.605869 2_3:-32198194 Msa0288140:CDS
TAGAATCTCTAAGTGAGACT+AGG 0.607426 2_3:-32194022 Msa0288140:three_prime_UTR
AACAGGATGTGATGAAGCAT+GGG 0.612508 2_3:-32194452 Msa0288140:CDS
TGATCAATGGATAAAAGAAG+AGG 0.617810 2_3:-32198730 Msa0288140:exon
CCATAGTGGATTTAATAATG+TGG 0.620739 2_3:-32197528 Msa0288140:intron
TCTGATATGCAGAAGGGTGG+TGG 0.626002 2_3:-32198430 Msa0288140:CDS
GAAGAGGTGTGGTTGCTGCA+GGG 0.627693 2_3:-32198714 Msa0288140:CDS
AGGGTGGTGGTGAAGCTGCA+GGG 0.632751 2_3:-32198417 Msa0288140:CDS
AGCAATCCCCTACAATCAGA+AGG 0.635579 2_3:-32197838 Msa0288140:CDS
AGATCTGATATGCAGAAGGG+TGG 0.640604 2_3:-32198433 Msa0288140:CDS
TCAACAACACTATATGGTGA+GGG 0.642871 2_3:-32194494 Msa0288140:CDS
AATGGATAAAAGAAGAGGTG+TGG 0.650250 2_3:-32198725 Msa0288140:CDS
GGTGGTGATTCTGAATCAGA+TGG 0.664264 2_3:-32198139 Msa0288140:CDS
TGATTCTGAATCAGATGGTG+AGG 0.669622 2_3:-32198134 Msa0288140:CDS
ATAAGATCTGATATGCAGAA+GGG 0.678384 2_3:-32198436 Msa0288140:CDS
TGGTTACTATAGCTAGCTAG+TGG 0.681225 2_3:-32194349 Msa0288140:three_prime_UTR
GGGATTGCTTCACTACAAGA+GGG 0.694450 2_3:+32197852 None:intergenic
AGATAACTGCAAGATAGACA+AGG 0.714341 2_3:+32197172 None:intergenic
GATTCTAAAAGGATGCATGG+TGG 0.732112 2_3:-32194369 Msa0288140:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATAATAAAAAAAAGAAA+AGG - chr2_3:32193974-32193993 Msa0288140:three_prime_UTR 10.0%
!!! TTTCAGTTATTTTTTTTTTA+TGG - chr2_3:32196065-32196084 Msa0288140:intron 10.0%
!!! TTCAGTTATTTTTTTTTTAT+GGG - chr2_3:32196066-32196085 Msa0288140:intron 10.0%
!!! TATTTTGAAAATGATTATAT+AGG - chr2_3:32198007-32198026 Msa0288140:CDS 10.0%
!!! ATTTTTCGAGTTTATATTTA+AGG - chr2_3:32196015-32196034 Msa0288140:intron 15.0%
!! AGGACAAATTATATATATAA+TGG - chr2_3:32196035-32196054 Msa0288140:intron 15.0%
!! GGACAAATTATATATATAAT+GGG - chr2_3:32196036-32196055 Msa0288140:intron 15.0%
!! GACAAATTATATATATAATG+GGG - chr2_3:32196037-32196056 Msa0288140:intron 15.0%
!!! TGGATTTTTTTTTTTTTTTG+AGG - chr2_3:32196710-32196729 Msa0288140:CDS 15.0%
!!! TTATTATTATTGCTAGTTTT+AGG - chr2_3:32197182-32197201 Msa0288140:CDS 15.0%
!!! TATACATATTTTTCATTTTC+AGG - chr2_3:32197272-32197291 Msa0288140:intron 15.0%
!!! ATACATATTTTTCATTTTCA+GGG - chr2_3:32197273-32197292 Msa0288140:intron 15.0%
!! TAATTAATAAATACATCACA+TGG - chr2_3:32197592-32197611 Msa0288140:intron 15.0%
!!! TTCTATAATTTGCTTTAGAA+AGG - chr2_3:32194031-32194050 Msa0288140:three_prime_UTR 20.0%
!!! TCTATAATTTGCTTTAGAAA+GGG - chr2_3:32194032-32194051 Msa0288140:three_prime_UTR 20.0%
!! GAAAAGTAAAGTAGTTAAAT+TGG - chr2_3:32194162-32194181 Msa0288140:three_prime_UTR 20.0%
!! TTATCTTTCTTGATTGAATT+GGG + chr2_3:32194467-32194486 None:intergenic 20.0%
!! TCATTAACATTCTTATTGAT+TGG + chr2_3:32194552-32194571 None:intergenic 20.0%
!! TTAATGATTCAATTGAATTG+AGG - chr2_3:32194565-32194584 Msa0288140:intron 20.0%
!! AATTCATCAAATTCATTCTT+TGG + chr2_3:32194630-32194649 None:intergenic 20.0%
!! AAAGAATGAATTTGATGAAT+TGG - chr2_3:32194629-32194648 Msa0288140:intron 20.0%
!! GAAAATTTCTTACTTGAATT+GGG + chr2_3:32195137-32195156 None:intergenic 20.0%
!! TGAAAATTTCTTACTTGAAT+TGG + chr2_3:32195138-32195157 None:intergenic 20.0%
!!! TCAGTCAATTTTGTAATTTT+TGG - chr2_3:32195165-32195184 Msa0288140:intron 20.0%
!!! CAGTCAATTTTGTAATTTTT+GGG - chr2_3:32195166-32195185 Msa0288140:intron 20.0%
!!! TGTGATTTACTAATCTTTTA+AGG - chr2_3:32195221-32195240 Msa0288140:intron 20.0%
!! TCAACATAAATTGTTGTATT+TGG - chr2_3:32195555-32195574 Msa0288140:intron 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG - chr2_3:32195612-32195631 Msa0288140:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG - chr2_3:32195613-32195632 Msa0288140:intron 20.0%
!!! CAATATAACTTTTACTGTTT+CGG - chr2_3:32195665-32195684 Msa0288140:intron 20.0%
!! TTAAATAATTACCTTCATTG+TGG + chr2_3:32196231-32196250 None:intergenic 20.0%
!!! TACATATCTACTCTTTTATA+CGG - chr2_3:32196625-32196644 Msa0288140:intron 20.0%
!!! CAACATTAAATTTGTTTTTG+TGG - chr2_3:32196690-32196709 Msa0288140:intron 20.0%
!! AATATCACGTGTATAAAAAA+TGG + chr2_3:32197008-32197027 None:intergenic 20.0%
!!! TCTTTTATTTTGGTAAACTA+GGG - chr2_3:32197731-32197750 Msa0288140:intron 20.0%
!! TCATAATAATCGTAACATAA+TGG - chr2_3:32197769-32197788 Msa0288140:intron 20.0%
!!! ATTGTTTTACATTGACATAT+TGG + chr2_3:32198037-32198056 None:intergenic 20.0%
!!! GATATGATAAAGCAAATTTT+TGG - chr2_3:32198167-32198186 Msa0288140:CDS 20.0%
!! TAGTTAATAACAAATCCATT+AGG - chr2_3:32198706-32198725 Msa0288140:CDS 20.0%
!! AGTTAATAACAAATCCATTA+GGG - chr2_3:32198707-32198726 Msa0288140:CDS 20.0%
!!! ATATTCATTTGCTTTCATTT+TGG - chr2_3:32198798-32198817 Msa0288140:five_prime_UTR 20.0%
! CTAAAATCCTAAAGACAAAT+GGG + chr2_3:32194137-32194156 None:intergenic 25.0%
!! TCTAAAATCCTAAAGACAAA+TGG + chr2_3:32194138-32194157 None:intergenic 25.0%
! TTAAATTGGTGAATGATCAA+TGG - chr2_3:32194176-32194195 Msa0288140:three_prime_UTR 25.0%
! CTTATCTTTCTTGATTGAAT+TGG + chr2_3:32194468-32194487 None:intergenic 25.0%
! AATTTGATGAATTGGATGAT+GGG - chr2_3:32194637-32194656 Msa0288140:intron 25.0%
! GAATCAACAAGAAAATGATA+AGG - chr2_3:32194902-32194921 Msa0288140:intron 25.0%
!! TTCAAAACAATCTTCTTTTC+TGG + chr2_3:32194942-32194961 None:intergenic 25.0%
!!! GTCTTGTTTTTTCATTTTTG+TGG + chr2_3:32195037-32195056 None:intergenic 25.0%
!! GTGATTTTCATCTCAATTAT+GGG - chr2_3:32195309-32195328 Msa0288140:intron 25.0%
! CCCAAAATATAAGCAAAAAT+TGG + chr2_3:32195616-32195635 None:intergenic 25.0%
! TCATTATTACCTGCAAATTA+AGG + chr2_3:32195785-32195804 None:intergenic 25.0%
! TACTGCATTGTTAAATTAGT+TGG - chr2_3:32195837-32195856 Msa0288140:intron 25.0%
! ACTGCATTGTTAAATTAGTT+GGG - chr2_3:32195838-32195857 Msa0288140:intron 25.0%
! ACATTAATTACATTATCAGC+GGG + chr2_3:32195936-32195955 None:intergenic 25.0%
! CACATTAATTACATTATCAG+CGG + chr2_3:32195937-32195956 None:intergenic 25.0%
! AGAATTCATTCAAATAAGGT+AGG + chr2_3:32196169-32196188 None:intergenic 25.0%
! GACAAGAATTCATTCAAATA+AGG + chr2_3:32196173-32196192 None:intergenic 25.0%
! TTTCATAACTATTTGGAAGA+TGG - chr2_3:32196365-32196384 Msa0288140:intron 25.0%
!! TAAAATCGGTAAGTTTTCAA+AGG - chr2_3:32196389-32196408 Msa0288140:intron 25.0%
!!! TTTTTGAGGAATTGTTTTTC+TGG - chr2_3:32196724-32196743 Msa0288140:CDS 25.0%
! TCTACATTATTACTATGCAT+TGG + chr2_3:32197064-32197083 None:intergenic 25.0%
! TAGTAATAATGTAGATCTGA+CGG - chr2_3:32197069-32197088 Msa0288140:intron 25.0%
!!! ATTATTGCTAGTTTTAGGTT+TGG - chr2_3:32197187-32197206 Msa0288140:CDS 25.0%
!!! GTGACAATTGTCTTTTATTT+TGG - chr2_3:32197721-32197740 Msa0288140:intron 25.0%
!!! GTCTTTTATTTTGGTAAACT+AGG - chr2_3:32197730-32197749 Msa0288140:intron 25.0%
! ATACTATCAACAACACTATA+TGG - chr2_3:32198419-32198438 Msa0288140:CDS 25.0%
! ATTAGGGTTAAATAGCAAAA+GGG - chr2_3:32198723-32198742 Msa0288140:CDS 25.0%
!! TTTTGGATAATGCTCAAATT+TGG - chr2_3:32198815-32198834 Msa0288140:five_prime_UTR 25.0%
! ATAAGTGGTTAATGGATAAG+AGG + chr2_3:32194107-32194126 None:intergenic 30.0%
TCCATTAACCACTTATGATA+TGG - chr2_3:32194111-32194130 Msa0288140:three_prime_UTR 30.0%
TGATCAATGGATAAAAGAAG+AGG - chr2_3:32194189-32194208 Msa0288140:three_prime_UTR 30.0%
ATGAAGAGTGATCAAGTTAA+AGG - chr2_3:32194246-32194265 Msa0288140:three_prime_UTR 30.0%
! TTCCTTTGGAAATCTGAATT+GGG + chr2_3:32194383-32194402 None:intergenic 30.0%
! TTTCCTTTGGAAATCTGAAT+TGG + chr2_3:32194384-32194403 None:intergenic 30.0%
ATAAGATCTGATATGCAGAA+GGG - chr2_3:32194483-32194502 Msa0288140:CDS 30.0%
GAATTTGATGAATTGGATGA+TGG - chr2_3:32194636-32194655 Msa0288140:intron 30.0%
TGAGAAAGATGAAAATGTTG+AGG - chr2_3:32194677-32194696 Msa0288140:CDS 30.0%
TGAGGAAATTGAAATTGAGA+TGG - chr2_3:32194818-32194837 Msa0288140:intron 30.0%
TTGATTCACAGTAACAACTT+TGG + chr2_3:32194889-32194908 None:intergenic 30.0%
TTTCTTCTGTTCTGTTTCAT+TGG + chr2_3:32194988-32195007 None:intergenic 30.0%
TTTGTGGTGAAATCTCATAT+TGG + chr2_3:32195021-32195040 None:intergenic 30.0%
TTGAATTCCTTCTGATTGTA+GGG + chr2_3:32195091-32195110 None:intergenic 30.0%
TTTGAATTCCTTCTGATTGT+AGG + chr2_3:32195092-32195111 None:intergenic 30.0%
! AATTGGGTTTGGAGAAATTT+TGG + chr2_3:32195121-32195140 None:intergenic 30.0%
TTTCTTACTTGAATTGGGTT+TGG + chr2_3:32195132-32195151 None:intergenic 30.0%
!!! CACACACATTTTCTAAAGTT+AGG + chr2_3:32195205-32195224 None:intergenic 30.0%
! GGTGATTTTCATCTCAATTA+TGG - chr2_3:32195308-32195327 Msa0288140:intron 30.0%
TTATAATTTCTCCTCCATAG+TGG - chr2_3:32195377-32195396 Msa0288140:intron 30.0%
CATTATTAAATCCACTATGG+AGG + chr2_3:32195391-32195410 None:intergenic 30.0%
CCACATTATTAAATCCACTA+TGG + chr2_3:32195394-32195413 None:intergenic 30.0%
!! CCATAGTGGATTTAATAATG+TGG - chr2_3:32195391-32195410 Msa0288140:intron 30.0%
ATGCAAAGGATATCAATTTG+AGG - chr2_3:32195478-32195497 Msa0288140:intron 30.0%
GGTCAACAAAACAATGTATT+TGG + chr2_3:32195595-32195614 None:intergenic 30.0%
!!! TTGCTTATATTTTGGGACTA+AGG - chr2_3:32195620-32195639 Msa0288140:intron 30.0%
AATAAGACTGCAAAAAGCAA+GGG + chr2_3:32195707-32195726 None:intergenic 30.0%
AAATAAGACTGCAAAAAGCA+AGG + chr2_3:32195708-32195727 None:intergenic 30.0%
TGCAAATTAAGGATCTATAG+AGG + chr2_3:32195774-32195793 None:intergenic 30.0%
!! TCTATAGATCCTTAATTTGC+AGG - chr2_3:32195773-32195792 Msa0288140:intron 30.0%
TACGATTGTACCTAAAATAC+CGG - chr2_3:32195968-32195987 Msa0288140:intron 30.0%
AACTTACTACGTATGAATAC+CGG + chr2_3:32195990-32196009 None:intergenic 30.0%
!!! TTTTTTTTTTATGGGCTCAG+AGG - chr2_3:32196074-32196093 Msa0288140:intron 30.0%
TAAGAGAACAAGATGCAATT+TGG - chr2_3:32196129-32196148 Msa0288140:intron 30.0%
GTGGAAGTTTCATAACTATT+TGG - chr2_3:32196358-32196377 Msa0288140:intron 30.0%
ATTTGGAAGATGGCTAAAAT+CGG - chr2_3:32196375-32196394 Msa0288140:intron 30.0%
ACTAACTCTAGTACTATTTC+AGG - chr2_3:32196492-32196511 Msa0288140:intron 30.0%
TAAATATAAGCATGCACGAT+CGG + chr2_3:32196605-32196624 None:intergenic 30.0%
! TGTTTATTTCATGCGAGTTT+TGG - chr2_3:32196941-32196960 Msa0288140:intron 30.0%
TCCAATACGACAAAGATATA+AGG - chr2_3:32196970-32196989 Msa0288140:intron 30.0%
TCCTTATATCTTTGTCGTAT+TGG + chr2_3:32196974-32196993 None:intergenic 30.0%
ATACGACAAAGATATAAGGA+AGG - chr2_3:32196974-32196993 Msa0288140:intron 30.0%
AGTAATAATGTAGATCTGAC+GGG - chr2_3:32197070-32197089 Msa0288140:intron 30.0%
!!! TTTGGTTTTCTTTTAGCCAA+TGG - chr2_3:32197624-32197643 Msa0288140:intron 30.0%
!! AACACAGTATTGTTGACTTT+GGG + chr2_3:32197820-32197839 None:intergenic 30.0%
!! AAACACAGTATTGTTGACTT+TGG + chr2_3:32197821-32197840 None:intergenic 30.0%
ACGAAAAGTAAAGACAAAAG+AGG + chr2_3:32197863-32197882 None:intergenic 30.0%
! TTTTCATCATACTAGTGTAG+TGG + chr2_3:32197894-32197913 None:intergenic 30.0%
!!! ATTTTTGGATTCGTCGATTT+CGG - chr2_3:32198182-32198201 Msa0288140:CDS 30.0%
ACACTAGTTAAACTAATGTG+TGG - chr2_3:32198350-32198369 Msa0288140:CDS 30.0%
AGTCAAGAAAGGATTCTAAA+AGG - chr2_3:32198539-32198558 Msa0288140:CDS 30.0%
GAGTAATTCAAAAGCAAATG+TGG + chr2_3:32198598-32198617 None:intergenic 30.0%
!!! CTTTTGCTATTTAACCCTAA+TGG + chr2_3:32198724-32198743 None:intergenic 30.0%
CATTAGGGTTAAATAGCAAA+AGG - chr2_3:32198722-32198741 Msa0288140:CDS 30.0%
AGAAGAAGATGAGTAGTAGT+TGG + chr2_3:32194009-32194028 None:intergenic 35.0%
! TTAATGGATAAGAGGCTTGA+AGG + chr2_3:32194099-32194118 None:intergenic 35.0%
GCCATATCATAAGTGGTTAA+TGG + chr2_3:32194115-32194134 None:intergenic 35.0%
AATGGATAAAAGAAGAGGTG+TGG - chr2_3:32194194-32194213 Msa0288140:three_prime_UTR 35.0%
AAGAGTGATCAAGTTAAAGG+TGG - chr2_3:32194249-32194268 Msa0288140:three_prime_UTR 35.0%
! CAAAGTGTTCAAAGCAGAAA+AGG - chr2_3:32194275-32194294 Msa0288140:three_prime_UTR 35.0%
GAAAAGGAAGAAGAACAAGA+AGG - chr2_3:32194291-32194310 Msa0288140:three_prime_UTR 35.0%
AGATTGAGAAGAACCTCAAT+TGG - chr2_3:32194333-32194352 Msa0288140:three_prime_UTR 35.0%
GATTGAGAAGAACCTCAATT+GGG - chr2_3:32194334-32194353 Msa0288140:three_prime_UTR 35.0%
GATTTCCAAAGGAAAAACAG+AGG - chr2_3:32194389-32194408 Msa0288140:CDS 35.0%
ATGAAATGGAAGACTCTTCT+TGG + chr2_3:32194436-32194455 None:intergenic 35.0%
ATTGGGCTTCTTGTATGAAA+TGG + chr2_3:32194450-32194469 None:intergenic 35.0%
GATAAGATCTGATATGCAGA+AGG - chr2_3:32194482-32194501 Msa0288140:CDS 35.0%
GATATCAAGCAATGTTGATG+TGG - chr2_3:32194725-32194744 Msa0288140:CDS 35.0%
TCAAAATTCACCTGAATCAG+TGG - chr2_3:32194749-32194768 Msa0288140:intron 35.0%
! GAATGAAAGCTTTGATGTGA+AGG - chr2_3:32194842-32194861 Msa0288140:intron 35.0%
GAATGAATCAGAGAAGAAAG+TGG - chr2_3:32194959-32194978 Msa0288140:intron 35.0%
TGAAACAGAACAGAAGAAAG+TGG - chr2_3:32194989-32195008 Msa0288140:intron 35.0%
TGAATTCCTTCTGATTGTAG+GGG + chr2_3:32195090-32195109 None:intergenic 35.0%
!!! CTTTTAAGGTTCAGTTCCAA+AGG - chr2_3:32195235-32195254 Msa0288140:intron 35.0%
!! TAGACTCTGCAACTTGTTTT+GGG + chr2_3:32195288-32195307 None:intergenic 35.0%
TCAAGATCAGCATTTGTGTT+TGG - chr2_3:32195423-32195442 Msa0288140:intron 35.0%
! TCAGCATTTGTGTTTGGAAT+TGG - chr2_3:32195429-32195448 Msa0288140:intron 35.0%
AGTCTCATCTTCTTATGCAA+AGG - chr2_3:32195464-32195483 Msa0288140:intron 35.0%
!!! TGCTTACATTTTGGAATCGA+GGG + chr2_3:32195527-32195546 None:intergenic 35.0%
TCCAAAATGTAAGCACAAAC+TGG - chr2_3:32195532-32195551 Msa0288140:intron 35.0%
! ACCAGTTTGTGCTTACATTT+TGG + chr2_3:32195536-32195555 None:intergenic 35.0%
ATTTCTGCAATGTCCTATGT+AGG - chr2_3:32195724-32195743 Msa0288140:intron 35.0%
AGATAACTGCAAGATAGACA+AGG + chr2_3:32195750-32195769 None:intergenic 35.0%
CCTACGTGTTAAAATTAGAG+TGG + chr2_3:32195871-32195890 None:intergenic 35.0%
!! CCACTCTAATTTTAACACGT+AGG - chr2_3:32195868-32195887 Msa0288140:intron 35.0%
TTAATTACATTATCAGCGGG+TGG + chr2_3:32195933-32195952 None:intergenic 35.0%
! CGTATGAATACCGGTATTTT+AGG + chr2_3:32195981-32196000 None:intergenic 35.0%
TGCAATTTGGATGCTGAAAT+TGG - chr2_3:32196142-32196161 Msa0288140:intron 35.0%
!!! AAACTGAAAGCACTTTTCTC+TGG - chr2_3:32196194-32196213 Msa0288140:intron 35.0%
GCAATTCGTACACATTTAGA+GGG + chr2_3:32196305-32196324 None:intergenic 35.0%
TGCAATTCGTACACATTTAG+AGG + chr2_3:32196306-32196325 None:intergenic 35.0%
AAATGTGTACGAATTGCAGT+TGG - chr2_3:32196308-32196327 Msa0288140:intron 35.0%
TCAAAGGCCTAACAAAATGA+TGG - chr2_3:32196405-32196424 Msa0288140:intron 35.0%
CAAAGGCCTAACAAAATGAT+GGG - chr2_3:32196406-32196425 Msa0288140:intron 35.0%
! GAAAGACCCATCATTTTGTT+AGG + chr2_3:32196415-32196434 None:intergenic 35.0%
AGTACTATTTCAGGCTTCTT+TGG - chr2_3:32196501-32196520 Msa0288140:intron 35.0%
ACCTTACAAGTGATAAGAGA+GGG + chr2_3:32196883-32196902 None:intergenic 35.0%
TACCTTACAAGTGATAAGAG+AGG + chr2_3:32196884-32196903 None:intergenic 35.0%
TGGAGTCAACATAGAATAGA+AGG + chr2_3:32197044-32197063 None:intergenic 35.0%
!! AGCTAGTTTGATTTTGTCGT+TGG + chr2_3:32197531-32197550 None:intergenic 35.0%
!! ATCACATGGATTAGCATCTT+TGG - chr2_3:32197606-32197625 Msa0288140:intron 35.0%
AAAAAACATGATTGCGCCAT+TGG + chr2_3:32197643-32197662 None:intergenic 35.0%
TTTGATCCCATTACTTGCAT+TGG - chr2_3:32197683-32197702 Msa0288140:intron 35.0%
TTGATCCCATTACTTGCATT+GGG - chr2_3:32197684-32197703 Msa0288140:intron 35.0%
AAACTAGGGAACACAATTGT+TGG - chr2_3:32197745-32197764 Msa0288140:intron 35.0%
!! GTATTGTTGACTTTGGGATT+GGG + chr2_3:32197814-32197833 None:intergenic 35.0%
!! AGTATTGTTGACTTTGGGAT+TGG + chr2_3:32197815-32197834 None:intergenic 35.0%
AAATATCCAGAGAGAGTCAT+TGG - chr2_3:32197954-32197973 Msa0288140:CDS 35.0%
!!! TTTTTGGATTCGTCGATTTC+GGG - chr2_3:32198183-32198202 Msa0288140:CDS 35.0%
CTAGTTAAACTAATGTGTGG+TGG - chr2_3:32198353-32198372 Msa0288140:CDS 35.0%
ATCAACAACACTATATGGTG+AGG - chr2_3:32198424-32198443 Msa0288140:CDS 35.0%
TCAACAACACTATATGGTGA+GGG - chr2_3:32198425-32198444 Msa0288140:CDS 35.0%
!! TTGTGTTGTTTCTGTCTAAC+TGG + chr2_3:32198501-32198520 None:intergenic 35.0%
GAATCCTTTCTTGACTTTGT+TGG + chr2_3:32198535-32198554 None:intergenic 35.0%
! AAGGATTCTAAAAGGATGCA+TGG - chr2_3:32198547-32198566 Msa0288140:CDS 35.0%
TATGCATAGCTATAGTTCTC+AGG - chr2_3:32198668-32198687 Msa0288140:CDS 35.0%
AGCAAAAGGGAATAATAGCT+TGG - chr2_3:32198736-32198755 Msa0288140:exon 35.0%
TCTCACTTAGAGATTCTAGA+TGG + chr2_3:32198895-32198914 None:intergenic 35.0%
TAGAATCTCTAAGTGAGACT+AGG - chr2_3:32198897-32198916 Msa0288140:five_prime_UTR 35.0%
CAAATGGGCCATATCATAAG+TGG + chr2_3:32194122-32194141 None:intergenic 40.0%
GATATGGCCCATTTGTCTTT+AGG - chr2_3:32194127-32194146 Msa0288140:three_prime_UTR 40.0%
AAGGAAGAAGAACAAGAAGG+AGG - chr2_3:32194294-32194313 Msa0288140:three_prime_UTR 40.0%
GAACAAGAAGGAGGAAATGT+TGG - chr2_3:32194303-32194322 Msa0288140:three_prime_UTR 40.0%
AGCCCAATTCAGATTTCCAA+AGG - chr2_3:32194378-32194397 Msa0288140:exon 40.0%
!! TGGTTCCTCTGTTTTTCCTT+TGG + chr2_3:32194397-32194416 None:intergenic 40.0%
TTGGTTCCATCAGAAATGCA+TGG + chr2_3:32194417-32194436 None:intergenic 40.0%
TTCTTGAACTCGATCCAACT+CGG + chr2_3:32194601-32194620 None:intergenic 40.0%
TGATTCTGAATCAGATGGTG+AGG - chr2_3:32194785-32194804 Msa0288140:intron 40.0%
GTAACAACTTTGGATTCTGC+TGG + chr2_3:32194879-32194898 None:intergenic 40.0%
! CTACTGCGTTTTTCTTCCTT+TGG + chr2_3:32195254-32195273 None:intergenic 40.0%
!!! TGCAACTTGTTTTGGGTTTG+TGG + chr2_3:32195281-32195300 None:intergenic 40.0%
!! CTAGACTCTGCAACTTGTTT+TGG + chr2_3:32195289-32195308 None:intergenic 40.0%
CAAAACAAGTTGCAGAGTCT+AGG - chr2_3:32195287-32195306 Msa0288140:intron 40.0%
!!! GTGCTTACATTTTGGAATCG+AGG + chr2_3:32195528-32195547 None:intergenic 40.0%
AAGATAGACAAGGCCTACAT+AGG + chr2_3:32195740-32195759 None:intergenic 40.0%
!! GGCAGTTTTGCTCTTTGTTT+TGG - chr2_3:32196329-32196348 Msa0288140:intron 40.0%
!!! CTCTTTGTTTTGGCAAGATG+TGG - chr2_3:32196339-32196358 Msa0288140:intron 40.0%
TACACTGACAGACAGACAAA+TGG - chr2_3:32196460-32196479 Msa0288140:intron 40.0%
GAATACGAAGAGCAGATCTT+TGG + chr2_3:32196540-32196559 None:intergenic 40.0%
TCGTATTCAGCACAATTAGC+CGG - chr2_3:32196552-32196571 Msa0288140:CDS 40.0%
GGATTATGATACCCTTCTGT+CGG - chr2_3:32196646-32196665 Msa0288140:intron 40.0%
TTTAGTGTATGCCGACAGAA+GGG + chr2_3:32196660-32196679 None:intergenic 40.0%
ATTTAGTGTATGCCGACAGA+AGG + chr2_3:32196661-32196680 None:intergenic 40.0%
AGAGACCCAATGCAAGTAAT+GGG + chr2_3:32197692-32197711 None:intergenic 40.0%
AAGAGACCCAATGCAAGTAA+TGG + chr2_3:32197693-32197712 None:intergenic 40.0%
ATCATACTAGTGTAGTGGCT+GGG + chr2_3:32197889-32197908 None:intergenic 40.0%
ATGCACTCACAAAAAAGCTG+TGG - chr2_3:32198219-32198238 Msa0288140:CDS 40.0%
TAGGCATATTCGGTCTAGTA+TGG - chr2_3:32198245-32198264 Msa0288140:CDS 40.0%
ATCTGTTGTTGCTCGCATTT+GGG - chr2_3:32198276-32198295 Msa0288140:CDS 40.0%
AAACAGGATGTGATGAAGCA+TGG - chr2_3:32198466-32198485 Msa0288140:CDS 40.0%
AACAGGATGTGATGAAGCAT+GGG - chr2_3:32198467-32198486 Msa0288140:CDS 40.0%
GCTACCAACAAAGTCAAGAA+AGG - chr2_3:32198528-32198547 Msa0288140:CDS 40.0%
! GATTCTAAAAGGATGCATGG+TGG - chr2_3:32198550-32198569 Msa0288140:CDS 40.0%
TGGTTACTATAGCTAGCTAG+TGG - chr2_3:32198570-32198589 Msa0288140:CDS 40.0%
GGTGGGGTGCAATATTCATT+GGG + chr2_3:32194060-32194079 None:intergenic 45.0%
TGGTGGGGTGCAATATTCAT+TGG + chr2_3:32194061-32194080 None:intergenic 45.0%
CAAGAAGGAGGAAATGTTGG+TGG - chr2_3:32194306-32194325 Msa0288140:three_prime_UTR 45.0%
TCTCTTCGAAGACCCAATTG+AGG + chr2_3:32194349-32194368 None:intergenic 45.0%
GAGGAACCATGCATTTCTGA+TGG - chr2_3:32194408-32194427 Msa0288140:CDS 45.0%
AGATCTGATATGCAGAAGGG+TGG - chr2_3:32194486-32194505 Msa0288140:CDS 45.0%
!! CCAACATGAACCACTGATTC+AGG + chr2_3:32194762-32194781 None:intergenic 45.0%
CCTGAATCAGTGGTTCATGT+TGG - chr2_3:32194759-32194778 Msa0288140:intron 45.0%
GAATCAGTGGTTCATGTTGG+TGG - chr2_3:32194762-32194781 Msa0288140:intron 45.0%
GGTGGTGATTCTGAATCAGA+TGG - chr2_3:32194780-32194799 Msa0288140:intron 45.0%
TGGTGAGGTTGAAGATGATG+AGG - chr2_3:32194800-32194819 Msa0288140:intron 45.0%
ACTACAAGAGGGACAGAAAC+TGG + chr2_3:32195059-32195078 None:intergenic 45.0%
GGGATTGCTTCACTACAAGA+GGG + chr2_3:32195070-32195089 None:intergenic 45.0%
AGCAATCCCCTACAATCAGA+AGG - chr2_3:32195081-32195100 Msa0288140:intron 45.0%
ATTACCTTCATTGTGGTGCC+AGG + chr2_3:32196224-32196243 None:intergenic 45.0%
GCCCTCTCTTATCACTTGTA+AGG - chr2_3:32196879-32196898 Msa0288140:intron 45.0%
CATCATACTAGTGTAGTGGC+TGG + chr2_3:32197890-32197909 None:intergenic 45.0%
GCAAAACCAATGACTCTCTC+TGG + chr2_3:32197963-32197982 None:intergenic 45.0%
CACAAAAAAGCTGTGGCTCT+AGG - chr2_3:32198226-32198245 Msa0288140:CDS 45.0%
CATCTGTTGTTGCTCGCATT+TGG - chr2_3:32198275-32198294 Msa0288140:CDS 45.0%
!! AGAAGCAATGGAGGTTGGTG+GGG + chr2_3:32194076-32194095 None:intergenic 50.0%
! GAGAAGCAATGGAGGTTGGT+GGG + chr2_3:32194077-32194096 None:intergenic 50.0%
GAAGGAGAAGCAATGGAGGT+TGG + chr2_3:32194081-32194100 None:intergenic 50.0%
GCTTGAAGGAGAAGCAATGG+AGG + chr2_3:32194085-32194104 None:intergenic 50.0%
GAGGCTTGAAGGAGAAGCAA+TGG + chr2_3:32194088-32194107 None:intergenic 50.0%
TCTGATATGCAGAAGGGTGG+TGG - chr2_3:32194489-32194508 Msa0288140:CDS 50.0%
GTGAAGCTGCAGGGAAATTG+AGG - chr2_3:32194511-32194530 Msa0288140:CDS 50.0%
GAGGAAGACGAAATCCGAGT+TGG - chr2_3:32194584-32194603 Msa0288140:intron 50.0%
GGGGATTGCTTCACTACAAG+AGG + chr2_3:32195071-32195090 None:intergenic 50.0%
!! GCACTTTTCTCTGGAGATCC+TGG - chr2_3:32196203-32196222 Msa0288140:intron 50.0%
AGATCCTGGCACCACAATGA+AGG - chr2_3:32196217-32196236 Msa0288140:intron 50.0%
TTCAGCACAATTAGCCGGTG+CGG - chr2_3:32196557-32196576 Msa0288140:CDS 50.0%
CATGCACGATCGGCTAATGT+GGG + chr2_3:32196595-32196614 None:intergenic 50.0%
TGTCGTTGGATGAGACGATG+AGG + chr2_3:32197517-32197536 None:intergenic 50.0%
AATGGTCCTCCACATCCTTG+TGG - chr2_3:32197787-32197806 Msa0288140:intron 50.0%
!! ACTTTGGGATTGGGACCACA+AGG + chr2_3:32197805-32197824 None:intergenic 50.0%
!! TTCGTCGATTTCGGGATGCA+TGG - chr2_3:32198191-32198210 Msa0288140:CDS 50.0%
!! TCGTCGATTTCGGGATGCAT+GGG - chr2_3:32198192-32198211 Msa0288140:CDS 50.0%
!! GCTGTGGCTCTAGGCATATT+CGG - chr2_3:32198235-32198254 Msa0288140:CDS 50.0%
GGAGAAGCAATGGAGGTTGG+TGG + chr2_3:32194078-32194097 None:intergenic 55.0%
! AGAAGAGGTGTGGTTGCTGC+AGG - chr2_3:32194204-32194223 Msa0288140:three_prime_UTR 55.0%
! GAAGAGGTGTGGTTGCTGCA+GGG - chr2_3:32194205-32194224 Msa0288140:three_prime_UTR 55.0%
GCATGCACGATCGGCTAATG+TGG + chr2_3:32196596-32196615 None:intergenic 55.0%
TTGGGACCACAAGGATGTGG+AGG + chr2_3:32197796-32197815 None:intergenic 55.0%
GGATTGGGACCACAAGGATG+TGG + chr2_3:32197799-32197818 None:intergenic 55.0%
GTTGTTGCTCGCATTTGGGC+AGG - chr2_3:32198280-32198299 Msa0288140:CDS 55.0%
TGGTTGCTGCAGGGTCAGTG+TGG - chr2_3:32194214-32194233 Msa0288140:three_prime_UTR 60.0%
GGTTGCTGCAGGGTCAGTGT+GGG - chr2_3:32194215-32194234 Msa0288140:three_prime_UTR 60.0%
! AAGGGTGGTGGTGAAGCTGC+AGG - chr2_3:32194501-32194520 Msa0288140:CDS 60.0%
! AGGGTGGTGGTGAAGCTGCA+GGG - chr2_3:32194502-32194521 Msa0288140:CDS 60.0%
TAGCCGGTGCGGTGCTTTCA+TGG - chr2_3:32196568-32196587 Msa0288140:CDS 60.0%
AGCCGGTGCGGTGCTTTCAT+GGG - chr2_3:32196569-32196588 Msa0288140:CDS 60.0%
!! GGCCCATGAAAGCACCGCAC+CGG + chr2_3:32196574-32196593 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 32193955 32198986 32193955 ID=Msa0288140;Name=Msa0288140
chr2_3 mRNA 32193955 32198986 32193955 ID=Msa0288140-mRNA-1;Parent=Msa0288140;Name=Msa0288140-mRNA-1;_AED=0.21;_eAED=0.21;_QI=240|1|1|1|1|1|8|429|564
chr2_3 exon 32193955 32194547 32193955 ID=Msa0288140-mRNA-1:exon:10836;Parent=Msa0288140-mRNA-1
chr2_3 exon 32194640 32194762 32194640 ID=Msa0288140-mRNA-1:exon:10835;Parent=Msa0288140-mRNA-1
chr2_3 exon 32196545 32196614 32196545 ID=Msa0288140-mRNA-1:exon:10834;Parent=Msa0288140-mRNA-1
chr2_3 exon 32196703 32196847 32196703 ID=Msa0288140-mRNA-1:exon:10833;Parent=Msa0288140-mRNA-1
chr2_3 exon 32197147 32197221 32197147 ID=Msa0288140-mRNA-1:exon:10832;Parent=Msa0288140-mRNA-1
chr2_3 exon 32197442 32197544 32197442 ID=Msa0288140-mRNA-1:exon:10831;Parent=Msa0288140-mRNA-1
chr2_3 exon 32197633 32197698 32197633 ID=Msa0288140-mRNA-1:exon:10830;Parent=Msa0288140-mRNA-1
chr2_3 exon 32197798 32198986 32197798 ID=Msa0288140-mRNA-1:exon:10829;Parent=Msa0288140-mRNA-1
chr2_3 five_prime_UTR 32198747 32198986 32198747 ID=Msa0288140-mRNA-1:five_prime_utr;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32197798 32198746 32197798 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32197633 32197698 32197633 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32197442 32197544 32197442 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32197147 32197221 32197147 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32196703 32196847 32196703 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32196545 32196614 32196545 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32194640 32194762 32194640 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 CDS 32194384 32194547 32194384 ID=Msa0288140-mRNA-1:cds;Parent=Msa0288140-mRNA-1
chr2_3 three_prime_UTR 32193955 32194383 32193955 ID=Msa0288140-mRNA-1:three_prime_utr;Parent=Msa0288140-mRNA-1
Gene Sequence

>Msa0288140

ATGGATAAAAGAAGAGGTGTGGTTGCTGCAGGGTCAGTGTGGGAGAGTAGAATGAAGAGTGATCAAGTTAAAGGTGGAATCAAAGTGTTCAAAGCAGAAAAGGAAGAAGAACAAGAAGGAGGAAATGTTGGTGGTGCTAGATTGAGAAGAACCTCAATTGGGTCTTCGAAGAGAAAAACTTGTAGCCCAATTCAGATTTCCAAAGGAAAAACAGAGGAACCATGCATTTCTGATGGAACCAAGAAGAGTCTTCCATTTCATACAAGAAGCCCAATTCAATCAAGAAAGATAAGATCTGATATGCAGAAGGGTGGTGGTGAAGCTGCAGGGAAATTGAGGAAGATTAAATCAGATCCAATCAATAAGAATGTTAATGATTCAATTGAATTGAGGAAGACGAAATCCGAGTTGGATCGAGTTCAAGAAAATGAGCCAAAGAATGAATTTGATGAATTGGATGATGGGTTTGAAAAGATTGAAGCTGAGAAAGATGAAAATGTTGAGGATTTTGATGTGTGTCAAGAGAAAGAGATATCAAGCAATGTTGATGTGGTTCAAAATTCACCTGAATCAGTGGTTCATGTTGGTGGTGATTCTGAATCAGATGGTGAGGTTGAAGATGATGAGGAAATTGAAATTGAGATGGAGAATGAAAGCTTTGATGTGAAGGAAATTAGTATTCCAGCAGAATCCAAAGTTGTTACTGTGAATCAACAAGAAAATGATAAGGTTGATGTGAATGAACCAGAAAAGAAGATTGTTTTGAATGAATCAGAGAAGAAAGTGGTAACCAATGAAACAGAACAGAAGAAAGTGGTGAATGCCAATATGAGATTTCACCACAAAAATGAAAAAACAAGACCAGTTTCTGTCCCTCTTGTAGTGAAGCAATCCCCTACAATCAGAAGGAATTCAAAAATTTACCAAAATTTCTCCAAACCCAATTCAAGTTCAGTTCCAAAGGAAGAAAAACGCAGTAGCTTTCCACAAACCCAAAACAAGTTGCAGAGTCTAGTGGATTTAATAATGTGGAGAGATGTTTCAAGATCAGCATTTGTGTTTGGAATTGGAACATTCGTTATAGTCTCATCTTCTTATGCAAAGGATATCAATTTGAGTCTTATTTCTGCAATGTCCTATGTAGGCCTTGTCTATCTTGCAGTTATCTTCCTCTATAGATCCTTAATTTGCAGAGGAGTGATAGATGTAGAAGACTCAAATTATGTAGTAAGAGAACAAGATGCAATTTGGATGCTGAAATTGGTCCTACCTTATTTGAATGAATTCTTGTCAAAACTGAAAGCACTTTTCTCTGGAGATCCTGGCACCACAATGAAGTTGGCAGTTTTGCTCTTTGTTTTGGCAAGATGTGGAAGTTTCATAACTATTTGGAAGATGGCTAAAATCGCAAATTTTTGGATTCGTCGATTTCGGGATGCATGGGATTCATGCACTCACAAAAAAGCTGTGGCTCTAGGCATATTCGGTCTAGTATGGAATTTGTCATCTGTTGTTGCTCGCATTTGGGCAGTGTTTGTACTATTTGTAGCATTCAGATACTATCAACAACACTATATGGTGAGGGATGAATGGGTGGAAGATGAAACAGGATGTGATGAAGCATGGGAAGAAGAACCAGTTAGACAGAAACAACACAACTTCGTTGCTACCAACAAAGTCAAGAAAGGATTCTAA
Protein sequence

>Msa0288140

MDKRRGVVAAGSVWESRMKSDQVKGGIKVFKAEKEEEQEGGNVGGARLRRTSIGSSKRKTCSPIQISKGKTEEPCISDGTKKSLPFHTRSPIQSRKIRSDMQKGGGEAAGKLRKIKSDPINKNVNDSIELRKTKSELDRVQENEPKNEFDELDDGFEKIEAEKDENVEDFDVCQEKEISSNVDVVQNSPESVVHVGGDSESDGEVEDDEEIEIEMENESFDVKEISIPAESKVVTVNQQENDKVDVNEPEKKIVLNESEKKVVTNETEQKKVVNANMRFHHKNEKTRPVSVPLVVKQSPTIRRNSKIYQNFSKPNSSSVPKEEKRSSFPQTQNKLQSLVDLIMWRDVSRSAFVFGIGTFVIVSSSYAKDINLSLISAMSYVGLVYLAVIFLYRSLICRGVIDVEDSNYVVREQDAIWMLKLVLPYLNEFLSKLKALFSGDPGTTMKLAVLLFVLARCGSFITIWKMAKIANFWIRRFRDAWDSCTHKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYMVRDEWVEDETGCDEAWEEEPVRQKQHNFVATNKVKKGF*