Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308140 | XP_024628361.2 | 98.516 | 337 | 5 | 0 | 1 | 337 | 34 | 370 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308140 | sp|Q08062|MDHC_MAIZE | 85.714 | 329 | 47 | 0 | 9 | 337 | 3 | 331 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308140 | G7LBJ9 | 98.220 | 337 | 6 | 0 | 1 | 337 | 77 | 413 | 0.0 | 684 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007970 | Msa1308140 | 0.804867 | 1.757714e-49 | -8.615850e-47 |
| Msa0017510 | Msa1308140 | 0.807623 | 4.617819e-50 | -8.615850e-47 |
| Msa0018000 | Msa1308140 | 0.801689 | 7.997483e-49 | -8.615850e-47 |
| Msa0032920 | Msa1308140 | -0.802465 | 5.539934e-49 | -8.615850e-47 |
| Msa0034270 | Msa1308140 | 0.809251 | 2.075523e-50 | -8.615850e-47 |
| Msa0040240 | Msa1308140 | 0.800506 | 1.395852e-48 | -8.615850e-47 |
| Msa0049790 | Msa1308140 | 0.820720 | 5.907403e-53 | -8.615850e-47 |
| Msa0081520 | Msa1308140 | 0.852269 | 5.156379e-61 | -8.615850e-47 |
| Msa0087470 | Msa1308140 | 0.821515 | 3.874684e-53 | -8.615850e-47 |
| Msa0093850 | Msa1308140 | 0.817902 | 2.590948e-52 | -8.615850e-47 |
| Msa0094850 | Msa1308140 | 0.809143 | 2.189382e-50 | -8.615850e-47 |
| Msa0110970 | Msa1308140 | 0.807983 | 3.871961e-50 | -8.615850e-47 |
| Msa0118570 | Msa1308140 | 0.835728 | 1.417097e-56 | -8.615850e-47 |
| Msa0623330 | Msa1308140 | 0.808819 | 2.567478e-50 | -8.615850e-47 |
| Msa0626450 | Msa1308140 | 0.823887 | 1.087281e-53 | -8.615850e-47 |
| Msa0626490 | Msa1308140 | 0.818927 | 1.517894e-52 | -8.615850e-47 |
| Msa0626510 | Msa1308140 | 0.818419 | 1.979150e-52 | -8.615850e-47 |
| Msa0638480 | Msa1308140 | 0.806230 | 9.098557e-50 | -8.615850e-47 |
| Msa0641210 | Msa1308140 | 0.816190 | 6.284798e-52 | -8.615850e-47 |
| Msa0664600 | Msa1308140 | 0.821384 | 4.155357e-53 | -8.615850e-47 |
| Msa0664910 | Msa1308140 | 0.807184 | 5.721782e-50 | -8.615850e-47 |
| Msa0683570 | Msa1308140 | 0.806542 | 7.819064e-50 | -8.615850e-47 |
| Msa0684500 | Msa1308140 | 0.800103 | 1.686289e-48 | -8.615850e-47 |
| Msa0698640 | Msa1308140 | 0.800953 | 1.131639e-48 | -8.615850e-47 |
| Msa0724910 | Msa1308140 | 0.806013 | 1.011047e-49 | -8.615850e-47 |
| Msa0727710 | Msa1308140 | 0.816082 | 6.641777e-52 | -8.615850e-47 |
| Msa0733390 | Msa1308140 | 0.812673 | 3.766893e-51 | -8.615850e-47 |
| Msa0741220 | Msa1308140 | 0.815155 | 1.068563e-51 | -8.615850e-47 |
| Msa0742740 | Msa1308140 | 0.853267 | 2.675138e-61 | -8.615850e-47 |
| Msa0765240 | Msa1308140 | 0.804771 | 1.840742e-49 | -8.615850e-47 |
| Msa0779870 | Msa1308140 | 0.832205 | 1.079398e-55 | -8.615850e-47 |
| Msa0780270 | Msa1308140 | 0.813609 | 2.346688e-51 | -8.615850e-47 |
| Msa0783530 | Msa1308140 | 0.811850 | 5.696560e-51 | -8.615850e-47 |
| Msa0795870 | Msa1308140 | 0.808202 | 3.477281e-50 | -8.615850e-47 |
| Msa0823820 | Msa1308140 | 0.862687 | 4.248964e-64 | -8.615850e-47 |
| Msa0136650 | Msa1308140 | 0.802554 | 5.308800e-49 | -8.615850e-47 |
| Msa0157290 | Msa1308140 | 0.808230 | 3.429439e-50 | -8.615850e-47 |
| Msa0173890 | Msa1308140 | 0.857400 | 1.675439e-62 | -8.615850e-47 |
| Msa0174450 | Msa1308140 | 0.819383 | 1.195266e-52 | -8.615850e-47 |
| Msa0205840 | Msa1308140 | 0.804418 | 2.181086e-49 | -8.615850e-47 |
| Msa0206840 | Msa1308140 | 0.841330 | 5.073524e-58 | -8.615850e-47 |
| Msa0211140 | Msa1308140 | 0.810371 | 1.191683e-50 | -8.615850e-47 |
| Msa0218810 | Msa1308140 | 0.808509 | 2.990545e-50 | -8.615850e-47 |
| Msa0225100 | Msa1308140 | 0.801511 | 8.699237e-49 | -8.615850e-47 |
| Msa0225860 | Msa1308140 | 0.846977 | 1.547306e-59 | -8.615850e-47 |
| Msa1227940 | Msa1308140 | 0.833858 | 4.189507e-56 | -8.615850e-47 |
| Msa1236410 | Msa1308140 | 0.811258 | 7.660441e-51 | -8.615850e-47 |
| Msa1252780 | Msa1308140 | 0.800068 | 1.713941e-48 | -8.615850e-47 |
| Msa1253550 | Msa1308140 | 0.810677 | 1.023626e-50 | -8.615850e-47 |
| Msa1276660 | Msa1308140 | 0.813545 | 2.424095e-51 | -8.615850e-47 |
| Msa1298370 | Msa1308140 | 0.811924 | 5.488687e-51 | -8.615850e-47 |
| Msa1308140 | Msa1313150 | 0.805368 | 1.380675e-49 | -8.615850e-47 |
| Msa1308140 | Msa1328640 | 0.823058 | 1.699452e-53 | -8.615850e-47 |
| Msa1308140 | Msa1328710 | 0.824865 | 6.403562e-54 | -8.615850e-47 |
| Msa1308140 | Msa1330420 | 0.803965 | 2.710064e-49 | -8.615850e-47 |
| Msa1308140 | Msa1353470 | 0.800042 | 1.735165e-48 | -8.615850e-47 |
| Msa1308140 | Msa1356830 | 0.854504 | 1.178188e-61 | -8.615850e-47 |
| Msa1308140 | Msa1397400 | 0.809210 | 2.117721e-50 | -8.615850e-47 |
| Msa1308140 | Msa1423880 | 0.809353 | 1.973140e-50 | -8.615850e-47 |
| Msa1308140 | Msa1437940 | 0.843340 | 1.487751e-58 | -8.615850e-47 |
| Msa1308140 | Msa1439610 | 0.802176 | 6.352406e-49 | -8.615850e-47 |
| Msa1308140 | Msa1440960 | 0.818034 | 2.419557e-52 | -8.615850e-47 |
| Msa1308140 | Msa1445190 | 0.824650 | 7.195735e-54 | -8.615850e-47 |
| Msa1308140 | Msa1449480 | 0.801386 | 9.225620e-49 | -8.615850e-47 |
| Msa1308140 | Msa1465010 | 0.802922 | 4.456945e-49 | -8.615850e-47 |
| Msa0367870 | Msa1308140 | 0.814354 | 1.608248e-51 | -8.615850e-47 |
| Msa0371170 | Msa1308140 | 0.821369 | 4.187408e-53 | -8.615850e-47 |
| Msa0378720 | Msa1308140 | 0.823458 | 1.370343e-53 | -8.615850e-47 |
| Msa0380620 | Msa1308140 | 0.815132 | 1.081398e-51 | -8.615850e-47 |
| Msa0388770 | Msa1308140 | 0.830589 | 2.696623e-55 | -8.615850e-47 |
| Msa0388960 | Msa1308140 | 0.802547 | 5.328149e-49 | -8.615850e-47 |
| Msa0392380 | Msa1308140 | 0.807693 | 4.462552e-50 | -8.615850e-47 |
| Msa0393440 | Msa1308140 | 0.817919 | 2.569223e-52 | -8.615850e-47 |
| Msa0406770 | Msa1308140 | 0.801225 | 9.953030e-49 | -8.615850e-47 |
| Msa0410650 | Msa1308140 | 0.831433 | 1.673901e-55 | -8.615850e-47 |
| Msa0417880 | Msa1308140 | 0.824462 | 7.965362e-54 | -8.615850e-47 |
| Msa0430260 | Msa1308140 | 0.820209 | 7.740777e-53 | -8.615850e-47 |
| Msa0432380 | Msa1308140 | 0.848425 | 6.181980e-60 | -8.615850e-47 |
| Msa0437560 | Msa1308140 | 0.803442 | 3.478732e-49 | -8.615850e-47 |
| Msa0440320 | Msa1308140 | 0.805454 | 1.324683e-49 | -8.615850e-47 |
| Msa0452920 | Msa1308140 | 0.800032 | 1.743143e-48 | -8.615850e-47 |
| Msa0461730 | Msa1308140 | 0.800526 | 1.382625e-48 | -8.615850e-47 |
| Msa0462070 | Msa1308140 | 0.820792 | 5.689299e-53 | -8.615850e-47 |
| Msa0474730 | Msa1308140 | 0.814908 | 1.212426e-51 | -8.615850e-47 |
| Msa0475790 | Msa1308140 | 0.825546 | 4.418159e-54 | -8.615850e-47 |
| Msa0479170 | Msa1308140 | 0.805913 | 1.061238e-49 | -8.615850e-47 |
| Msa1005870 | Msa1308140 | 0.803622 | 3.193528e-49 | -8.615850e-47 |
| Msa1019430 | Msa1308140 | 0.821488 | 3.932384e-53 | -8.615850e-47 |
| Msa1019470 | Msa1308140 | 0.820005 | 8.619712e-53 | -8.615850e-47 |
| Msa1020510 | Msa1308140 | 0.824261 | 8.881509e-54 | -8.615850e-47 |
| Msa1020630 | Msa1308140 | 0.828300 | 9.707484e-55 | -8.615850e-47 |
| Msa1024740 | Msa1308140 | 0.809311 | 2.015118e-50 | -8.615850e-47 |
| Msa1028280 | Msa1308140 | 0.806657 | 7.395035e-50 | -8.615850e-47 |
| Msa1031930 | Msa1308140 | 0.864270 | 1.372274e-64 | -8.615850e-47 |
| Msa1051830 | Msa1308140 | 0.801410 | 9.125590e-49 | -8.615850e-47 |
| Msa1060420 | Msa1308140 | 0.816290 | 5.968591e-52 | -8.615850e-47 |
| Msa1071770 | Msa1308140 | 0.827881 | 1.224474e-54 | -8.615850e-47 |
| Msa1085200 | Msa1308140 | 0.829588 | 4.734070e-55 | -8.615850e-47 |
| Msa0243600 | Msa1308140 | 0.816183 | 6.307006e-52 | -8.615850e-47 |
| Msa0248970 | Msa1308140 | 0.819578 | 1.079191e-52 | -8.615850e-47 |
| Msa0249540 | Msa1308140 | 0.803782 | 2.958303e-49 | -8.615850e-47 |
| Msa0258310 | Msa1308140 | 0.820778 | 5.729768e-53 | -8.615850e-47 |
| Msa0261340 | Msa1308140 | 0.804365 | 2.236692e-49 | -8.615850e-47 |
| Msa0277180 | Msa1308140 | 0.802370 | 5.793930e-49 | -8.615850e-47 |
| Msa0287740 | Msa1308140 | 0.808415 | 3.132370e-50 | -8.615850e-47 |
| Msa0288140 | Msa1308140 | 0.805712 | 1.169393e-49 | -8.615850e-47 |
| Msa0292400 | Msa1308140 | 0.804778 | 1.834907e-49 | -8.615850e-47 |
| Msa0297790 | Msa1308140 | 0.851206 | 1.032380e-60 | -8.615850e-47 |
| Msa0300270 | Msa1308140 | 0.806600 | 7.603367e-50 | -8.615850e-47 |
| Msa0300320 | Msa1308140 | 0.817601 | 3.030933e-52 | -8.615850e-47 |
| Msa0302170 | Msa1308140 | 0.807651 | 4.555640e-50 | -8.615850e-47 |
| Msa0326590 | Msa1308140 | 0.818516 | 1.881809e-52 | -8.615850e-47 |
| Msa0330340 | Msa1308140 | 0.807343 | 5.294688e-50 | -8.615850e-47 |
| Msa0335800 | Msa1308140 | 0.847841 | 8.959761e-60 | -8.615850e-47 |
| Msa0337540 | Msa1308140 | 0.814517 | 1.480138e-51 | -8.615850e-47 |
| Msa0341690 | Msa1308140 | 0.822605 | 2.165715e-53 | -8.615850e-47 |
| Msa0346060 | Msa1308140 | 0.807131 | 5.872014e-50 | -8.615850e-47 |
| Msa0358890 | Msa1308140 | 0.807887 | 4.058092e-50 | -8.615850e-47 |
| Msa0360210 | Msa1308140 | 0.801311 | 9.559635e-49 | -8.615850e-47 |
| Msa1108790 | Msa1308140 | 0.803786 | 2.951813e-49 | -8.615850e-47 |
| Msa1113800 | Msa1308140 | 0.838182 | 3.347145e-57 | -8.615850e-47 |
| Msa1123380 | Msa1308140 | 0.817747 | 2.808766e-52 | -8.615850e-47 |
| Msa1125940 | Msa1308140 | 0.803649 | 3.152158e-49 | -8.615850e-47 |
| Msa1132700 | Msa1308140 | 0.801091 | 1.060487e-48 | -8.615850e-47 |
| Msa1132840 | Msa1308140 | 0.806510 | 7.943256e-50 | -8.615850e-47 |
| Msa1139890 | Msa1308140 | 0.803620 | 3.195729e-49 | -8.615850e-47 |
| Msa1150820 | Msa1308140 | 0.810925 | 9.046268e-51 | -8.615850e-47 |
| Msa1151910 | Msa1308140 | 0.829182 | 5.939012e-55 | -8.615850e-47 |
| Msa1152510 | Msa1308140 | 0.802582 | 5.238592e-49 | -8.615850e-47 |
| Msa1158830 | Msa1308140 | 0.828027 | 1.129304e-54 | -8.615850e-47 |
| Msa1160500 | Msa1308140 | 0.833748 | 4.463102e-56 | -8.615850e-47 |
| Msa1181190 | Msa1308140 | 0.831123 | 1.994683e-55 | -8.615850e-47 |
| Msa1184330 | Msa1308140 | 0.842511 | 2.473625e-58 | -8.615850e-47 |
| Msa1193290 | Msa1308140 | 0.800895 | 1.162945e-48 | -8.615850e-47 |
| Msa1199570 | Msa1308140 | 0.832263 | 1.044718e-55 | -8.615850e-47 |
| Msa1208160 | Msa1308140 | 0.807332 | 5.322407e-50 | -8.615850e-47 |
| Msa1208430 | Msa1308140 | 0.810999 | 8.717527e-51 | -8.615850e-47 |
| Msa0487500 | Msa1308140 | 0.804296 | 2.312468e-49 | -8.615850e-47 |
| Msa0488790 | Msa1308140 | 0.842866 | 1.990761e-58 | -8.615850e-47 |
| Msa0507680 | Msa1308140 | 0.829212 | 5.842368e-55 | -8.615850e-47 |
| Msa0513160 | Msa1308140 | 0.819629 | 1.050569e-52 | -8.615850e-47 |
| Msa0557070 | Msa1308140 | 0.804079 | 2.566410e-49 | -8.615850e-47 |
| Msa0573380 | Msa1308140 | 0.853587 | 2.164923e-61 | -8.615850e-47 |
| Msa0574390 | Msa1308140 | 0.809030 | 2.314226e-50 | -8.615850e-47 |
| Msa0574890 | Msa1308140 | 0.826460 | 2.680932e-54 | -8.615850e-47 |
| Msa0580370 | Msa1308140 | 0.803917 | 2.772269e-49 | -8.615850e-47 |
| Msa0601950 | Msa1308140 | 0.804435 | 2.163278e-49 | -8.615850e-47 |
| Msa0861510 | Msa1308140 | 0.827011 | 1.979830e-54 | -8.615850e-47 |
| Msa0861530 | Msa1308140 | 0.812923 | 3.319786e-51 | -8.615850e-47 |
| Msa0861600 | Msa1308140 | 0.833135 | 6.345939e-56 | -8.615850e-47 |
| Msa0863010 | Msa1308140 | 0.863820 | 1.895086e-64 | -8.615850e-47 |
| Msa0866520 | Msa1308140 | 0.800746 | 1.247033e-48 | -8.615850e-47 |
| Msa0875290 | Msa1308140 | 0.806625 | 7.512559e-50 | -8.615850e-47 |
| Msa0880140 | Msa1308140 | 0.804548 | 2.049326e-49 | -8.615850e-47 |
| Msa0896410 | Msa1308140 | 0.828884 | 7.015111e-55 | -8.615850e-47 |
| Msa0967870 | Msa1308140 | 0.802171 | 6.368587e-49 | -8.615850e-47 |
| Msa0974060 | Msa1308140 | 0.811999 | 5.285232e-51 | -8.615850e-47 |
| Msa0974070 | Msa1308140 | 0.804480 | 2.117011e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308140 | MtrunA17_Chr8g0334691 | 98.377 | 308 | 5 | 0 | 30 | 337 | 1 | 308 | 0.0 | 630 |
| Msa1308140 | MtrunA17_Chr1g0167651 | 85.106 | 329 | 49 | 0 | 9 | 337 | 3 | 331 | 0.0 | 564 |
| Msa1308140 | MtrunA17_Chr1g0187751 | 84.195 | 329 | 52 | 0 | 9 | 337 | 3 | 331 | 0.0 | 557 |
| Msa1308140 | MtrunA17_Chr1g0197371 | 41.975 | 324 | 182 | 4 | 9 | 330 | 92 | 411 | 1.05e-79 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1308140 | AT1G04410.1 | 82.979 | 329 | 56 | 0 | 9 | 337 | 3 | 331 | 0.0 | 548 |
| Msa1308140 | AT5G43330.1 | 83.283 | 329 | 55 | 0 | 9 | 337 | 3 | 331 | 0.0 | 546 |
| Msa1308140 | AT5G56720.1 | 75.074 | 337 | 84 | 0 | 1 | 337 | 34 | 370 | 0.0 | 530 |
| Msa1308140 | AT5G58330.2 | 43.519 | 324 | 177 | 4 | 9 | 330 | 96 | 415 | 1.05e-83 | 260 |
| Msa1308140 | AT5G58330.1 | 43.519 | 324 | 177 | 4 | 9 | 330 | 97 | 416 | 1.09e-83 | 260 |
| Msa1308140 | AT5G58330.3 | 43.791 | 306 | 166 | 4 | 27 | 330 | 6 | 307 | 2.08e-80 | 248 |
| Msa1308140 | AT3G47520.1 | 28.400 | 250 | 158 | 7 | 14 | 253 | 85 | 323 | 1.55e-13 | 71.2 |
Find 91 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTCATGATTGGGTTCT+AGG | 0.164362 | 8_4:+4306282 | Msa1308140:CDS |
| TGCAAAATTACAGGTTGATT+TGG | 0.201276 | 8_4:-4305122 | None:intergenic |
| TTAAGTTGACACCGTATATT+TGG | 0.219456 | 8_4:+4306764 | Msa1308140:three_prime_UTR |
| TCATCTCCTTTGCAACAATT+AGG | 0.226762 | 8_4:-4307046 | None:intergenic |
| CCAGCATTAGAGGCACTTAA+AGG | 0.277108 | 8_4:+4305161 | Msa1308140:CDS |
| ATTATAGCATTTGTGTTTGC+TGG | 0.284088 | 8_4:-4305778 | None:intergenic |
| CAGCTTCCTGGCTTTGATAA+TGG | 0.284118 | 8_4:-4306223 | None:intergenic |
| AATTAGTTGCTGATGATAAT+TGG | 0.294423 | 8_4:+4306016 | Msa1308140:CDS |
| CATCTCCTTTGCAACAATTA+GGG | 0.299962 | 8_4:-4307045 | None:intergenic |
| CATTTAGTTTCTCAGAGATT+TGG | 0.317500 | 8_4:-4305879 | None:intergenic |
| GGATGTTAACATTGCTGTTA+TGG | 0.320450 | 8_4:+4305355 | Msa1308140:CDS |
| TTCTTAATATATACTTGTTT+AGG | 0.321282 | 8_4:-4306819 | None:intergenic |
| TGATATTGAACCAGCATTAG+AGG | 0.332040 | 8_4:+4305151 | Msa1308140:CDS |
| GTGTATTCTGATGGATCTTA+TGG | 0.333768 | 8_4:+4306418 | Msa1308140:CDS |
| GCTGCTTTCCCACTTCTTAG+AGG | 0.334277 | 8_4:+4305206 | Msa1308140:CDS |
| TCTCCTTTGTCACATGTAAC+AGG | 0.337906 | 8_4:-4306469 | None:intergenic |
| GTTTCCAAGAACCAAATATA+CGG | 0.338070 | 8_4:-4306775 | None:intergenic |
| GACACCGTATATTTGGTTCT+TGG | 0.342672 | 8_4:+4306771 | Msa1308140:three_prime_UTR |
| GCAAAATTACAGGTTGATTT+GGG | 0.351194 | 8_4:-4305121 | None:intergenic |
| ATATATACTTGTTTAGGTTC+AGG | 0.351940 | 8_4:-4306813 | None:intergenic |
| TAATGCACTGGACAGCTTCC+TGG | 0.352308 | 8_4:-4306235 | None:intergenic |
| CTAATTCTCTGACATGCTTC+TGG | 0.371163 | 8_4:-4305999 | None:intergenic |
| CAAGGCTCAAGCTTCAGCTT+TGG | 0.381754 | 8_4:+4305445 | Msa1308140:CDS |
| TCAAGCATATGCAAAATTAC+AGG | 0.382709 | 8_4:-4305131 | None:intergenic |
| TGTGTTGTACACTCTAGTTT+AGG | 0.384161 | 8_4:+4306982 | Msa1308140:three_prime_UTR |
| CTTGTGATCATATTCATGAT+TGG | 0.392102 | 8_4:+4306274 | Msa1308140:CDS |
| ATCATCCCTCTTGCTATCAT+TGG | 0.393430 | 8_4:-4305092 | None:intergenic |
| AGCATTTGTGTTTGCTGGAT+TGG | 0.402722 | 8_4:-4305773 | None:intergenic |
| TTGTGATCATATTCATGATT+GGG | 0.409049 | 8_4:+4306275 | Msa1308140:CDS |
| CTTGATCATAATAGAGCATT+GGG | 0.419063 | 8_4:+4305856 | Msa1308140:CDS |
| GGCTCAAGCTTCAGCTTTGG+AGG | 0.422591 | 8_4:+4305448 | Msa1308140:CDS |
| AACATTGCTGTTATGGTTGG+TGG | 0.430741 | 8_4:+4305362 | Msa1308140:CDS |
| ATATATTAAGAAAGTTTGTA+AGG | 0.433110 | 8_4:+4306830 | Msa1308140:three_prime_UTR |
| CTTTCCATTCCTTCCTTCCG+TGG | 0.437314 | 8_4:-4305389 | None:intergenic |
| CAGCATTAGAGGCACTTAAA+GGG | 0.439157 | 8_4:+4305162 | Msa1308140:CDS |
| CCTTTAAGTGCCTCTAATGC+TGG | 0.442041 | 8_4:-4305161 | None:intergenic |
| TCAGGGAACATGGGTATCAA+TGG | 0.455290 | 8_4:+4306393 | Msa1308140:intron |
| ATAGCAAGAGGGATGATGTT+AGG | 0.473050 | 8_4:+4305098 | Msa1308140:CDS |
| TATAGGTGTTGTTGCTACTA+CGG | 0.487099 | 8_4:+4305313 | Msa1308140:intron |
| GGCACTTAAAGGGGTGAAGA+TGG | 0.489594 | 8_4:+4305172 | Msa1308140:CDS |
| TTGATCTATTTCAGGGAACA+TGG | 0.493077 | 8_4:+4306383 | Msa1308140:intron |
| GTTAACATTGCTGTTATGGT+TGG | 0.495278 | 8_4:+4305359 | Msa1308140:CDS |
| TGAATTCTCAAGGGAAAAGA+TGG | 0.497373 | 8_4:+4306648 | Msa1308140:CDS |
| TAAGAATGTTTCAATTTACA+AGG | 0.500824 | 8_4:+4305427 | Msa1308140:CDS |
| GAAAGAACCGGTCACCGTAT+TGG | 0.503989 | 8_4:+4304690 | Msa1308140:CDS |
| TTTCCATTCCTTCCTTCCGT+GGG | 0.509336 | 8_4:-4305388 | None:intergenic |
| CAGGGAACATGGGTATCAAT+GGG | 0.511230 | 8_4:+4306394 | Msa1308140:intron |
| TATCACCCTAATTGTTGCAA+AGG | 0.511981 | 8_4:+4307040 | Msa1308140:three_prime_UTR |
| ACGGTTGCATGGTTGACGTC+TGG | 0.512596 | 8_4:-4305961 | None:intergenic |
| TCTCAAAGTTGAGAAAGAAC+CGG | 0.521257 | 8_4:+4304678 | Msa1308140:CDS |
| ACTTGATCATAATAGAGCAT+TGG | 0.521514 | 8_4:+4305855 | Msa1308140:CDS |
| TCACAACTGTTCAGCAGCGT+GGG | 0.522667 | 8_4:+4306196 | Msa1308140:CDS |
| GTATTGGTCACTGGTGCTGC+AGG | 0.525951 | 8_4:+4304706 | Msa1308140:CDS |
| TACTTGTTGCCACGGTTGCA+TGG | 0.531832 | 8_4:-4305972 | None:intergenic |
| GTTGTACACTCTAGTTTAGG+AGG | 0.538077 | 8_4:+4306985 | Msa1308140:three_prime_UTR |
| CCGGTCACCGTATTGGTCAC+TGG | 0.538505 | 8_4:+4304697 | Msa1308140:CDS |
| CTGGCCATTACTTGTTGCCA+CGG | 0.542599 | 8_4:-4305980 | None:intergenic |
| GCAACCGTGGCAACAAGTAA+TGG | 0.552748 | 8_4:+4305976 | Msa1308140:CDS |
| TTACATGTGACAAAGGAGAA+TGG | 0.562455 | 8_4:+4306473 | Msa1308140:CDS |
| TCAAGATTGATGAATTCTCA+AGG | 0.563770 | 8_4:+4306638 | Msa1308140:CDS |
| ATCACAACTGTTCAGCAGCG+TGG | 0.564705 | 8_4:+4306195 | Msa1308140:CDS |
| CCAGTGACCAATACGGTGAC+CGG | 0.566136 | 8_4:-4304697 | None:intergenic |
| GGTGGATTCCCACGGAAGGA+AGG | 0.567363 | 8_4:+4305380 | Msa1308140:CDS |
| GGATCTTATGGTATCCAACC+TGG | 0.573108 | 8_4:+4306430 | Msa1308140:CDS |
| GGGGTGCCATTATCAAAGCC+AGG | 0.576526 | 8_4:+4306217 | Msa1308140:CDS |
| TTATGGTTGGTGGATTCCCA+CGG | 0.584515 | 8_4:+4305372 | Msa1308140:CDS |
| CACAACTGTTCAGCAGCGTG+GGG | 0.588509 | 8_4:+4306197 | Msa1308140:CDS |
| TCAATGGGAGTGTATTCTGA+TGG | 0.591080 | 8_4:+4306409 | Msa1308140:CDS |
| TTGGGTTCTAGGTACACCTA+AGG | 0.591270 | 8_4:+4306293 | Msa1308140:CDS |
| AAGAGTAAATGAGACCAGGT+TGG | 0.593344 | 8_4:-4306444 | None:intergenic |
| TTGTACACTCTAGTTTAGGA+GGG | 0.594174 | 8_4:+4306986 | Msa1308140:three_prime_UTR |
| TTTCCTGTTACATGTGACAA+AGG | 0.594930 | 8_4:+4306466 | Msa1308140:CDS |
| AAAACATGCCTCTAAGAAGT+GGG | 0.598346 | 8_4:-4305214 | None:intergenic |
| ATTCCCACGGAAGGAAGGAA+TGG | 0.604648 | 8_4:+4305385 | Msa1308140:CDS |
| TGATCTATTTCAGGGAACAT+GGG | 0.607759 | 8_4:+4306384 | Msa1308140:intron |
| TGCAGCACCAGTGACCAATA+CGG | 0.612142 | 8_4:-4304704 | None:intergenic |
| CTTGTTCCAATGATAGCAAG+AGG | 0.618184 | 8_4:+4305086 | Msa1308140:CDS |
| GGATGTTGTTGAAGCTTGCA+AGG | 0.620315 | 8_4:+4305334 | Msa1308140:CDS |
| GCTCATTGAGGAGAAAACAT+TGG | 0.620815 | 8_4:+4306687 | Msa1308140:CDS |
| AGCATTAGAGGCACTTAAAG+GGG | 0.621633 | 8_4:+4305163 | Msa1308140:CDS |
| TGTACACTCTAGTTTAGGAG+GGG | 0.625534 | 8_4:+4306987 | Msa1308140:three_prime_UTR |
| CAAGATTGATGAATTCTCAA+GGG | 0.626012 | 8_4:+4306639 | Msa1308140:CDS |
| ACTTGCTGCTGATAATGCAC+TGG | 0.630076 | 8_4:-4306247 | None:intergenic |
| GGAGAATGGAACATTGTACA+AGG | 0.636027 | 8_4:+4306487 | Msa1308140:CDS |
| GGTTGGTGGATTCCCACGGA+AGG | 0.640456 | 8_4:+4305376 | Msa1308140:CDS |
| AACAGCTCAAGAGCTCATTG+AGG | 0.646195 | 8_4:+4306675 | Msa1308140:CDS |
| GGAAAAGAGTAAATGAGACC+AGG | 0.651573 | 8_4:-4306448 | None:intergenic |
| GACGTCTGGATATTGAGTTG+AGG | 0.679778 | 8_4:-4305947 | None:intergenic |
| AGACGTCAACCATGCAACCG+TGG | 0.680021 | 8_4:+4305963 | Msa1308140:CDS |
| TTGTTCCAATGATAGCAAGA+GGG | 0.692772 | 8_4:+4305087 | Msa1308140:CDS |
| ACAACTGTTCAGCAGCGTGG+GGG | 0.720838 | 8_4:+4306198 | Msa1308140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACTATATTGATTTTTAT+TGG | - | chr8_4:4304925-4304944 | None:intergenic | 10.0% |
| !! | TTAATCAAATCAAAATTAAA+AGG | - | chr8_4:4305042-4305061 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTGTGAAATTAA+AGG | - | chr8_4:4306723-4306742 | None:intergenic | 10.0% |
| !!! | TTTACTATATTGATTTTTAT+TGG | - | chr8_4:4304925-4304944 | None:intergenic | 10.0% |
| !! | TTAATCAAATCAAAATTAAA+AGG | - | chr8_4:4305042-4305061 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTGTGAAATTAA+AGG | - | chr8_4:4306723-4306742 | None:intergenic | 10.0% |
| !! | ACATAAATTTAAAAATCCAT+AGG | + | chr8_4:4304824-4304843 | Msa1308140:intron | 15.0% |
| !! | CATAAATTTAAAAATCCATA+GGG | + | chr8_4:4304825-4304844 | Msa1308140:intron | 15.0% |
| !!! | TTTTGATTTGATTAAAAAAC+AGG | + | chr8_4:4305047-4305066 | Msa1308140:intron | 15.0% |
| !! | TGCATATAAAAATGTAATAT+AGG | + | chr8_4:4305296-4305315 | Msa1308140:intron | 15.0% |
| !!! | ATATATTTTTCTTTTGTGTT+AGG | + | chr8_4:4306157-4306176 | Msa1308140:intron | 15.0% |
| !! | TTATGTTATGATAATTTGAA+AGG | + | chr8_4:4306613-4306632 | Msa1308140:intron | 15.0% |
| !! | TATGTTATGATAATTTGAAA+GGG | + | chr8_4:4306614-4306633 | Msa1308140:intron | 15.0% |
| !! | TTCTTAATATATACTTGTTT+AGG | - | chr8_4:4306822-4306841 | None:intergenic | 15.0% |
| !! | ATATATTAAGAAAGTTTGTA+AGG | + | chr8_4:4306830-4306849 | Msa1308140:three_prime_UTR | 15.0% |
| !! | ACATAAATTTAAAAATCCAT+AGG | + | chr8_4:4304824-4304843 | Msa1308140:intron | 15.0% |
| !! | CATAAATTTAAAAATCCATA+GGG | + | chr8_4:4304825-4304844 | Msa1308140:intron | 15.0% |
| !!! | TTTTGATTTGATTAAAAAAC+AGG | + | chr8_4:4305047-4305066 | Msa1308140:intron | 15.0% |
| !! | TGCATATAAAAATGTAATAT+AGG | + | chr8_4:4305296-4305315 | Msa1308140:intron | 15.0% |
| !!! | ATATATTTTTCTTTTGTGTT+AGG | + | chr8_4:4306157-4306176 | Msa1308140:intron | 15.0% |
| !! | TTATGTTATGATAATTTGAA+AGG | + | chr8_4:4306613-4306632 | Msa1308140:intron | 15.0% |
| !! | TATGTTATGATAATTTGAAA+GGG | + | chr8_4:4306614-4306633 | Msa1308140:intron | 15.0% |
| !! | TTCTTAATATATACTTGTTT+AGG | - | chr8_4:4306822-4306841 | None:intergenic | 15.0% |
| !! | ATATATTAAGAAAGTTTGTA+AGG | + | chr8_4:4306830-4306849 | Msa1308140:three_prime_UTR | 15.0% |
| !! | ATGGAAAATAACATTTCATA+AGG | - | chr8_4:4304774-4304793 | None:intergenic | 20.0% |
| !!! | ACTTTATTTGCAATGTAATA+TGG | - | chr8_4:4304793-4304812 | None:intergenic | 20.0% |
| !!! | TTTTTAATCATATTCCATCA+TGG | + | chr8_4:4305235-4305254 | Msa1308140:intron | 20.0% |
| !! | TAAGAATGTTTCAATTTACA+AGG | + | chr8_4:4305427-4305446 | Msa1308140:CDS | 20.0% |
| !! | ATGTGAAAAATGTTATCATT+TGG | + | chr8_4:4305914-4305933 | Msa1308140:CDS | 20.0% |
| !! | TGTGAAAAATGTTATCATTT+GGG | + | chr8_4:4305915-4305934 | Msa1308140:CDS | 20.0% |
| !!! | TGAAGATTTGTTATTTTAGA+AGG | + | chr8_4:4306949-4306968 | Msa1308140:three_prime_UTR | 20.0% |
| !! | ATGGAAAATAACATTTCATA+AGG | - | chr8_4:4304774-4304793 | None:intergenic | 20.0% |
| !!! | ACTTTATTTGCAATGTAATA+TGG | - | chr8_4:4304793-4304812 | None:intergenic | 20.0% |
| !!! | TTTTTAATCATATTCCATCA+TGG | + | chr8_4:4305235-4305254 | Msa1308140:intron | 20.0% |
| !! | TAAGAATGTTTCAATTTACA+AGG | + | chr8_4:4305427-4305446 | Msa1308140:CDS | 20.0% |
| !! | ATGTGAAAAATGTTATCATT+TGG | + | chr8_4:4305914-4305933 | Msa1308140:CDS | 20.0% |
| !! | TGTGAAAAATGTTATCATTT+GGG | + | chr8_4:4305915-4305934 | Msa1308140:CDS | 20.0% |
| !!! | TGAAGATTTGTTATTTTAGA+AGG | + | chr8_4:4306949-4306968 | Msa1308140:three_prime_UTR | 20.0% |
| ! | GATTAAAAAACAGGACAAAT+TGG | + | chr8_4:4305056-4305075 | Msa1308140:intron | 25.0% |
| ! | ATTCATAAAGAAAACCATGA+TGG | - | chr8_4:4305252-4305271 | None:intergenic | 25.0% |
| ! | ACCTAACTATACTATAAAGA+GGG | - | chr8_4:4305515-4305534 | None:intergenic | 25.0% |
| ! | AACCTAACTATACTATAAAG+AGG | - | chr8_4:4305516-4305535 | None:intergenic | 25.0% |
| ! | AAAATCAGTTACGTTTGAAA+AGG | + | chr8_4:4305541-4305560 | Msa1308140:intron | 25.0% |
| ! | CCAAAACTTTATACCAATTT+GGG | + | chr8_4:4305620-4305639 | Msa1308140:intron | 25.0% |
| ! | TGAACCATTAATTAACAGTT+CGG | + | chr8_4:4305649-4305668 | Msa1308140:intron | 25.0% |
| !! | TTCCAATTATTTCTTAATGC+AGG | + | chr8_4:4305738-4305757 | Msa1308140:intron | 25.0% |
| !! | GACATGTTATATTTTTCTCA+GGG | - | chr8_4:4305828-4305847 | None:intergenic | 25.0% |
| !! | AGACATGTTATATTTTTCTC+AGG | - | chr8_4:4305829-4305848 | None:intergenic | 25.0% |
| ! | GTGAAAAATGTTATCATTTG+GGG | + | chr8_4:4305916-4305935 | Msa1308140:CDS | 25.0% |
| ! | AATTAGTTGCTGATGATAAT+TGG | + | chr8_4:4306016-4306035 | Msa1308140:CDS | 25.0% |
| ! | ATATACACTTAATTTCCTAG+TGG | - | chr8_4:4306141-4306160 | None:intergenic | 25.0% |
| ! | TTGTGATCATATTCATGATT+GGG | + | chr8_4:4306275-4306294 | Msa1308140:CDS | 25.0% |
| ! | AATTAAGAAAAACGAACCTT+AGG | - | chr8_4:4306312-4306331 | None:intergenic | 25.0% |
| ! | TATCTACATTGATCTATTTC+AGG | + | chr8_4:4306375-4306394 | Msa1308140:intron | 25.0% |
| ! | ATCTACATTGATCTATTTCA+GGG | + | chr8_4:4306376-4306395 | Msa1308140:intron | 25.0% |
| !! | ATATATACTTGTTTAGGTTC+AGG | - | chr8_4:4306816-4306835 | None:intergenic | 25.0% |
| !!! | AATCTCATCTGATTTTAGAA+GGG | - | chr8_4:4307020-4307039 | None:intergenic | 25.0% |
| !! | AAATCTCATCTGATTTTAGA+AGG | - | chr8_4:4307021-4307040 | None:intergenic | 25.0% |
| ! | GATTAAAAAACAGGACAAAT+TGG | + | chr8_4:4305056-4305075 | Msa1308140:intron | 25.0% |
| ! | ATTCATAAAGAAAACCATGA+TGG | - | chr8_4:4305252-4305271 | None:intergenic | 25.0% |
| ! | ACCTAACTATACTATAAAGA+GGG | - | chr8_4:4305515-4305534 | None:intergenic | 25.0% |
| ! | AACCTAACTATACTATAAAG+AGG | - | chr8_4:4305516-4305535 | None:intergenic | 25.0% |
| ! | AAAATCAGTTACGTTTGAAA+AGG | + | chr8_4:4305541-4305560 | Msa1308140:intron | 25.0% |
| ! | CCAAAACTTTATACCAATTT+GGG | + | chr8_4:4305620-4305639 | Msa1308140:intron | 25.0% |
| ! | TGAACCATTAATTAACAGTT+CGG | + | chr8_4:4305649-4305668 | Msa1308140:intron | 25.0% |
| !! | TTCCAATTATTTCTTAATGC+AGG | + | chr8_4:4305738-4305757 | Msa1308140:intron | 25.0% |
| !! | GACATGTTATATTTTTCTCA+GGG | - | chr8_4:4305828-4305847 | None:intergenic | 25.0% |
| !! | AGACATGTTATATTTTTCTC+AGG | - | chr8_4:4305829-4305848 | None:intergenic | 25.0% |
| ! | GTGAAAAATGTTATCATTTG+GGG | + | chr8_4:4305916-4305935 | Msa1308140:CDS | 25.0% |
| ! | AATTAGTTGCTGATGATAAT+TGG | + | chr8_4:4306016-4306035 | Msa1308140:CDS | 25.0% |
| ! | ATATACACTTAATTTCCTAG+TGG | - | chr8_4:4306141-4306160 | None:intergenic | 25.0% |
| ! | TTGTGATCATATTCATGATT+GGG | + | chr8_4:4306275-4306294 | Msa1308140:CDS | 25.0% |
| ! | AATTAAGAAAAACGAACCTT+AGG | - | chr8_4:4306312-4306331 | None:intergenic | 25.0% |
| ! | TATCTACATTGATCTATTTC+AGG | + | chr8_4:4306375-4306394 | Msa1308140:intron | 25.0% |
| ! | ATCTACATTGATCTATTTCA+GGG | + | chr8_4:4306376-4306395 | Msa1308140:intron | 25.0% |
| !! | ATATATACTTGTTTAGGTTC+AGG | - | chr8_4:4306816-4306835 | None:intergenic | 25.0% |
| !!! | AATCTCATCTGATTTTAGAA+GGG | - | chr8_4:4307020-4307039 | None:intergenic | 25.0% |
| !! | AAATCTCATCTGATTTTAGA+AGG | - | chr8_4:4307021-4307040 | None:intergenic | 25.0% |
| AGACATATGTTGAATCTCAA+TGG | - | chr8_4:4304888-4304907 | None:intergenic | 30.0% | |
| !! | GCAAAATTACAGGTTGATTT+GGG | - | chr8_4:4305124-4305143 | None:intergenic | 30.0% |
| !! | TGCAAAATTACAGGTTGATT+TGG | - | chr8_4:4305125-4305144 | None:intergenic | 30.0% |
| TCAAGCATATGCAAAATTAC+AGG | - | chr8_4:4305134-4305153 | None:intergenic | 30.0% | |
| ACCCTCTTTATAGTATAGTT+AGG | + | chr8_4:4305511-4305530 | Msa1308140:intron | 30.0% | |
| GCCAAAACTTTATACCAATT+TGG | + | chr8_4:4305619-4305638 | Msa1308140:intron | 30.0% | |
| ! | CCCAAATTGGTATAAAGTTT+TGG | - | chr8_4:4305623-4305642 | None:intergenic | 30.0% |
| AAGACCGAACTGTTAATTAA+TGG | - | chr8_4:4305656-4305675 | None:intergenic | 30.0% | |
| GAAAGGAAATTATAACTACC+TGG | - | chr8_4:4305680-4305699 | None:intergenic | 30.0% | |
| ! | GTTCATGGTTTAGTTTAGAA+AGG | - | chr8_4:4305697-4305716 | None:intergenic | 30.0% |
| ATCAAGATTAGGATTGTTCA+TGG | - | chr8_4:4305712-4305731 | None:intergenic | 30.0% | |
| TGGAAGATACAATCAAGATT+AGG | - | chr8_4:4305723-4305742 | None:intergenic | 30.0% | |
| CACCTGCATTAAGAAATAAT+TGG | - | chr8_4:4305743-4305762 | None:intergenic | 30.0% | |
| ATTATAGCATTTGTGTTTGC+TGG | - | chr8_4:4305781-4305800 | None:intergenic | 30.0% | |
| ! | ATATTTTTCTCAGGGATTGA+TGG | - | chr8_4:4305820-4305839 | None:intergenic | 30.0% |
| ACTTGATCATAATAGAGCAT+TGG | + | chr8_4:4305855-4305874 | Msa1308140:CDS | 30.0% | |
| ! | CTTGATCATAATAGAGCATT+GGG | + | chr8_4:4305856-4305875 | Msa1308140:CDS | 30.0% |
| ! | CATTTAGTTTCTCAGAGATT+TGG | - | chr8_4:4305882-4305901 | None:intergenic | 30.0% |
| CTTGTGATCATATTCATGAT+TGG | + | chr8_4:4306274-4306293 | Msa1308140:CDS | 30.0% | |
| !! | TTCCTAGTTCTAGCAAATAA+CGG | + | chr8_4:4306538-4306557 | Msa1308140:intron | 30.0% |
| !! | GATTACTGATTTCTTCATCA+AGG | - | chr8_4:4306584-4306603 | None:intergenic | 30.0% |
| TCAAGATTGATGAATTCTCA+AGG | + | chr8_4:4306638-4306657 | Msa1308140:CDS | 30.0% | |
| CAAGATTGATGAATTCTCAA+GGG | + | chr8_4:4306639-4306658 | Msa1308140:CDS | 30.0% | |
| AAAAAAGGGTAGTCAATTCA+AGG | - | chr8_4:4306746-4306765 | None:intergenic | 30.0% | |
| ! | TACGGTGTCAACTTAAAAAA+GGG | - | chr8_4:4306760-4306779 | None:intergenic | 30.0% |
| ! | ATACGGTGTCAACTTAAAAA+AGG | - | chr8_4:4306761-4306780 | None:intergenic | 30.0% |
| !! | TTAAGTTGACACCGTATATT+TGG | + | chr8_4:4306764-4306783 | Msa1308140:three_prime_UTR | 30.0% |
| GTTTCCAAGAACCAAATATA+CGG | - | chr8_4:4306778-4306797 | None:intergenic | 30.0% | |
| ! | TGCTATTGTTATGTCTTTTG+TGG | + | chr8_4:4306917-4306936 | Msa1308140:three_prime_UTR | 30.0% |
| AGACATATGTTGAATCTCAA+TGG | - | chr8_4:4304888-4304907 | None:intergenic | 30.0% | |
| !! | GCAAAATTACAGGTTGATTT+GGG | - | chr8_4:4305124-4305143 | None:intergenic | 30.0% |
| !! | TGCAAAATTACAGGTTGATT+TGG | - | chr8_4:4305125-4305144 | None:intergenic | 30.0% |
| TCAAGCATATGCAAAATTAC+AGG | - | chr8_4:4305134-4305153 | None:intergenic | 30.0% | |
| ACCCTCTTTATAGTATAGTT+AGG | + | chr8_4:4305511-4305530 | Msa1308140:intron | 30.0% | |
| GCCAAAACTTTATACCAATT+TGG | + | chr8_4:4305619-4305638 | Msa1308140:intron | 30.0% | |
| ! | CCCAAATTGGTATAAAGTTT+TGG | - | chr8_4:4305623-4305642 | None:intergenic | 30.0% |
| AAGACCGAACTGTTAATTAA+TGG | - | chr8_4:4305656-4305675 | None:intergenic | 30.0% | |
| GAAAGGAAATTATAACTACC+TGG | - | chr8_4:4305680-4305699 | None:intergenic | 30.0% | |
| ! | GTTCATGGTTTAGTTTAGAA+AGG | - | chr8_4:4305697-4305716 | None:intergenic | 30.0% |
| ATCAAGATTAGGATTGTTCA+TGG | - | chr8_4:4305712-4305731 | None:intergenic | 30.0% | |
| TGGAAGATACAATCAAGATT+AGG | - | chr8_4:4305723-4305742 | None:intergenic | 30.0% | |
| CACCTGCATTAAGAAATAAT+TGG | - | chr8_4:4305743-4305762 | None:intergenic | 30.0% | |
| ATTATAGCATTTGTGTTTGC+TGG | - | chr8_4:4305781-4305800 | None:intergenic | 30.0% | |
| ! | ATATTTTTCTCAGGGATTGA+TGG | - | chr8_4:4305820-4305839 | None:intergenic | 30.0% |
| ACTTGATCATAATAGAGCAT+TGG | + | chr8_4:4305855-4305874 | Msa1308140:CDS | 30.0% | |
| ! | CTTGATCATAATAGAGCATT+GGG | + | chr8_4:4305856-4305875 | Msa1308140:CDS | 30.0% |
| ! | CATTTAGTTTCTCAGAGATT+TGG | - | chr8_4:4305882-4305901 | None:intergenic | 30.0% |
| CTTGTGATCATATTCATGAT+TGG | + | chr8_4:4306274-4306293 | Msa1308140:CDS | 30.0% | |
| !! | TTCCTAGTTCTAGCAAATAA+CGG | + | chr8_4:4306538-4306557 | Msa1308140:intron | 30.0% |
| !! | GATTACTGATTTCTTCATCA+AGG | - | chr8_4:4306584-4306603 | None:intergenic | 30.0% |
| TCAAGATTGATGAATTCTCA+AGG | + | chr8_4:4306638-4306657 | Msa1308140:CDS | 30.0% | |
| CAAGATTGATGAATTCTCAA+GGG | + | chr8_4:4306639-4306658 | Msa1308140:CDS | 30.0% | |
| AAAAAAGGGTAGTCAATTCA+AGG | - | chr8_4:4306746-4306765 | None:intergenic | 30.0% | |
| ! | TACGGTGTCAACTTAAAAAA+GGG | - | chr8_4:4306760-4306779 | None:intergenic | 30.0% |
| ! | ATACGGTGTCAACTTAAAAA+AGG | - | chr8_4:4306761-4306780 | None:intergenic | 30.0% |
| !! | TTAAGTTGACACCGTATATT+TGG | + | chr8_4:4306764-4306783 | Msa1308140:three_prime_UTR | 30.0% |
| GTTTCCAAGAACCAAATATA+CGG | - | chr8_4:4306778-4306797 | None:intergenic | 30.0% | |
| ! | TGCTATTGTTATGTCTTTTG+TGG | + | chr8_4:4306917-4306936 | Msa1308140:three_prime_UTR | 30.0% |
| TCTCAAAGTTGAGAAAGAAC+CGG | + | chr8_4:4304678-4304697 | Msa1308140:CDS | 35.0% | |
| !! | TGTTGAATCTCAATGGATTG+TGG | - | chr8_4:4304881-4304900 | None:intergenic | 35.0% |
| TTGTTCCAATGATAGCAAGA+GGG | + | chr8_4:4305087-4305106 | Msa1308140:CDS | 35.0% | |
| TGATATTGAACCAGCATTAG+AGG | + | chr8_4:4305151-4305170 | Msa1308140:CDS | 35.0% | |
| ! | AAAACATGCCTCTAAGAAGT+GGG | - | chr8_4:4305217-4305236 | None:intergenic | 35.0% |
| ! | AAAAACATGCCTCTAAGAAG+TGG | - | chr8_4:4305218-4305237 | None:intergenic | 35.0% |
| !! | TATAGGTGTTGTTGCTACTA+CGG | + | chr8_4:4305313-4305332 | Msa1308140:intron | 35.0% |
| ! | GGATGTTAACATTGCTGTTA+TGG | + | chr8_4:4305355-4305374 | Msa1308140:CDS | 35.0% |
| ! | GTTAACATTGCTGTTATGGT+TGG | + | chr8_4:4305359-4305378 | Msa1308140:CDS | 35.0% |
| ACCTTTACAGAAAACCATGA+CGG | - | chr8_4:4305569-4305588 | None:intergenic | 35.0% | |
| ! | ATTGAGAAGGTTTGAAACTG+AGG | - | chr8_4:4306044-4306063 | None:intergenic | 35.0% |
| CAAAGATAGTCAGATTGAGA+AGG | - | chr8_4:4306057-4306076 | None:intergenic | 35.0% | |
| ! | TGGAATATTTAGAGCATGGA+TGG | - | chr8_4:4306098-4306117 | None:intergenic | 35.0% |
| ! | TGCATGGAATATTTAGAGCA+TGG | - | chr8_4:4306102-4306121 | None:intergenic | 35.0% |
| CATATTCATGATTGGGTTCT+AGG | + | chr8_4:4306282-4306301 | Msa1308140:CDS | 35.0% | |
| GATAAAGCACAAAGCATAAG+TGG | - | chr8_4:4306359-4306378 | None:intergenic | 35.0% | |
| TTGATCTATTTCAGGGAACA+TGG | + | chr8_4:4306383-4306402 | Msa1308140:intron | 35.0% | |
| TGATCTATTTCAGGGAACAT+GGG | + | chr8_4:4306384-4306403 | Msa1308140:intron | 35.0% | |
| ! | GTGTATTCTGATGGATCTTA+TGG | + | chr8_4:4306418-4306437 | Msa1308140:CDS | 35.0% |
| TTTCCTGTTACATGTGACAA+AGG | + | chr8_4:4306466-4306485 | Msa1308140:CDS | 35.0% | |
| TTACATGTGACAAAGGAGAA+TGG | + | chr8_4:4306473-4306492 | Msa1308140:CDS | 35.0% | |
| TGAATTCTCAAGGGAAAAGA+TGG | + | chr8_4:4306648-4306667 | Msa1308140:CDS | 35.0% | |
| ! | TGTGTTGTACACTCTAGTTT+AGG | + | chr8_4:4306982-4307001 | Msa1308140:three_prime_UTR | 35.0% |
| ! | TTGTACACTCTAGTTTAGGA+GGG | + | chr8_4:4306986-4307005 | Msa1308140:three_prime_UTR | 35.0% |
| TCTCAAAGTTGAGAAAGAAC+CGG | + | chr8_4:4304678-4304697 | Msa1308140:CDS | 35.0% | |
| !! | TGTTGAATCTCAATGGATTG+TGG | - | chr8_4:4304881-4304900 | None:intergenic | 35.0% |
| TTGTTCCAATGATAGCAAGA+GGG | + | chr8_4:4305087-4305106 | Msa1308140:CDS | 35.0% | |
| TGATATTGAACCAGCATTAG+AGG | + | chr8_4:4305151-4305170 | Msa1308140:CDS | 35.0% | |
| ! | AAAACATGCCTCTAAGAAGT+GGG | - | chr8_4:4305217-4305236 | None:intergenic | 35.0% |
| ! | AAAAACATGCCTCTAAGAAG+TGG | - | chr8_4:4305218-4305237 | None:intergenic | 35.0% |
| !! | TATAGGTGTTGTTGCTACTA+CGG | + | chr8_4:4305313-4305332 | Msa1308140:intron | 35.0% |
| ! | GGATGTTAACATTGCTGTTA+TGG | + | chr8_4:4305355-4305374 | Msa1308140:CDS | 35.0% |
| ! | GTTAACATTGCTGTTATGGT+TGG | + | chr8_4:4305359-4305378 | Msa1308140:CDS | 35.0% |
| ACCTTTACAGAAAACCATGA+CGG | - | chr8_4:4305569-4305588 | None:intergenic | 35.0% | |
| ! | ATTGAGAAGGTTTGAAACTG+AGG | - | chr8_4:4306044-4306063 | None:intergenic | 35.0% |
| CAAAGATAGTCAGATTGAGA+AGG | - | chr8_4:4306057-4306076 | None:intergenic | 35.0% | |
| ! | TGGAATATTTAGAGCATGGA+TGG | - | chr8_4:4306098-4306117 | None:intergenic | 35.0% |
| ! | TGCATGGAATATTTAGAGCA+TGG | - | chr8_4:4306102-4306121 | None:intergenic | 35.0% |
| CATATTCATGATTGGGTTCT+AGG | + | chr8_4:4306282-4306301 | Msa1308140:CDS | 35.0% | |
| GATAAAGCACAAAGCATAAG+TGG | - | chr8_4:4306359-4306378 | None:intergenic | 35.0% | |
| TTGATCTATTTCAGGGAACA+TGG | + | chr8_4:4306383-4306402 | Msa1308140:intron | 35.0% | |
| TGATCTATTTCAGGGAACAT+GGG | + | chr8_4:4306384-4306403 | Msa1308140:intron | 35.0% | |
| ! | GTGTATTCTGATGGATCTTA+TGG | + | chr8_4:4306418-4306437 | Msa1308140:CDS | 35.0% |
| TTTCCTGTTACATGTGACAA+AGG | + | chr8_4:4306466-4306485 | Msa1308140:CDS | 35.0% | |
| TTACATGTGACAAAGGAGAA+TGG | + | chr8_4:4306473-4306492 | Msa1308140:CDS | 35.0% | |
| TGAATTCTCAAGGGAAAAGA+TGG | + | chr8_4:4306648-4306667 | Msa1308140:CDS | 35.0% | |
| ! | TGTGTTGTACACTCTAGTTT+AGG | + | chr8_4:4306982-4307001 | Msa1308140:three_prime_UTR | 35.0% |
| ! | TTGTACACTCTAGTTTAGGA+GGG | + | chr8_4:4306986-4307005 | Msa1308140:three_prime_UTR | 35.0% |
| TCCATAGGGTAAATTGCAAG+TGG | + | chr8_4:4304839-4304858 | Msa1308140:intron | 40.0% | |
| CTTGTTCCAATGATAGCAAG+AGG | + | chr8_4:4305086-4305105 | Msa1308140:CDS | 40.0% | |
| ! | ATCATCCCTCTTGCTATCAT+TGG | - | chr8_4:4305095-4305114 | None:intergenic | 40.0% |
| ATAGCAAGAGGGATGATGTT+AGG | + | chr8_4:4305098-4305117 | Msa1308140:CDS | 40.0% | |
| !! | CAGCATTAGAGGCACTTAAA+GGG | + | chr8_4:4305162-4305181 | Msa1308140:CDS | 40.0% |
| !! | AGCATTAGAGGCACTTAAAG+GGG | + | chr8_4:4305163-4305182 | Msa1308140:CDS | 40.0% |
| ! | AACATTGCTGTTATGGTTGG+TGG | + | chr8_4:4305362-4305381 | Msa1308140:CDS | 40.0% |
| ! | ACCGTCATGGTTTTCTGTAA+AGG | + | chr8_4:4305565-4305584 | Msa1308140:intron | 40.0% |
| ATTAACAGTTCGGTCTTACC+AGG | + | chr8_4:4305659-4305678 | Msa1308140:intron | 40.0% | |
| ! | AGCATTTGTGTTTGCTGGAT+TGG | - | chr8_4:4305776-4305795 | None:intergenic | 40.0% |
| CTAATTCTCTGACATGCTTC+TGG | - | chr8_4:4306002-4306021 | None:intergenic | 40.0% | |
| AAGAGATTGCTTTGCATGCA+TGG | - | chr8_4:4306118-4306137 | None:intergenic | 40.0% | |
| ! | TCAATGGGAGTGTATTCTGA+TGG | + | chr8_4:4306409-4306428 | Msa1308140:CDS | 40.0% |
| AAGAGTAAATGAGACCAGGT+TGG | - | chr8_4:4306447-4306466 | None:intergenic | 40.0% | |
| GGAAAAGAGTAAATGAGACC+AGG | - | chr8_4:4306451-4306470 | None:intergenic | 40.0% | |
| TCTCCTTTGTCACATGTAAC+AGG | - | chr8_4:4306472-4306491 | None:intergenic | 40.0% | |
| GGAGAATGGAACATTGTACA+AGG | + | chr8_4:4306487-4306506 | Msa1308140:CDS | 40.0% | |
| ! | GACCGTTATTTGCTAGAACT+AGG | - | chr8_4:4306543-4306562 | None:intergenic | 40.0% |
| GCTCATTGAGGAGAAAACAT+TGG | + | chr8_4:4306687-4306706 | Msa1308140:CDS | 40.0% | |
| !! | GACACCGTATATTTGGTTCT+TGG | + | chr8_4:4306771-4306790 | Msa1308140:three_prime_UTR | 40.0% |
| ! | GTTGTACACTCTAGTTTAGG+AGG | + | chr8_4:4306985-4307004 | Msa1308140:three_prime_UTR | 40.0% |
| ! | TGTACACTCTAGTTTAGGAG+GGG | + | chr8_4:4306987-4307006 | Msa1308140:three_prime_UTR | 40.0% |
| TCCATAGGGTAAATTGCAAG+TGG | + | chr8_4:4304839-4304858 | Msa1308140:intron | 40.0% | |
| CTTGTTCCAATGATAGCAAG+AGG | + | chr8_4:4305086-4305105 | Msa1308140:CDS | 40.0% | |
| ! | ATCATCCCTCTTGCTATCAT+TGG | - | chr8_4:4305095-4305114 | None:intergenic | 40.0% |
| ATAGCAAGAGGGATGATGTT+AGG | + | chr8_4:4305098-4305117 | Msa1308140:CDS | 40.0% | |
| !! | CAGCATTAGAGGCACTTAAA+GGG | + | chr8_4:4305162-4305181 | Msa1308140:CDS | 40.0% |
| !! | AGCATTAGAGGCACTTAAAG+GGG | + | chr8_4:4305163-4305182 | Msa1308140:CDS | 40.0% |
| ! | AACATTGCTGTTATGGTTGG+TGG | + | chr8_4:4305362-4305381 | Msa1308140:CDS | 40.0% |
| ! | ACCGTCATGGTTTTCTGTAA+AGG | + | chr8_4:4305565-4305584 | Msa1308140:intron | 40.0% |
| ATTAACAGTTCGGTCTTACC+AGG | + | chr8_4:4305659-4305678 | Msa1308140:intron | 40.0% | |
| ! | AGCATTTGTGTTTGCTGGAT+TGG | - | chr8_4:4305776-4305795 | None:intergenic | 40.0% |
| CTAATTCTCTGACATGCTTC+TGG | - | chr8_4:4306002-4306021 | None:intergenic | 40.0% | |
| AAGAGATTGCTTTGCATGCA+TGG | - | chr8_4:4306118-4306137 | None:intergenic | 40.0% | |
| ! | TCAATGGGAGTGTATTCTGA+TGG | + | chr8_4:4306409-4306428 | Msa1308140:CDS | 40.0% |
| AAGAGTAAATGAGACCAGGT+TGG | - | chr8_4:4306447-4306466 | None:intergenic | 40.0% | |
| GGAAAAGAGTAAATGAGACC+AGG | - | chr8_4:4306451-4306470 | None:intergenic | 40.0% | |
| TCTCCTTTGTCACATGTAAC+AGG | - | chr8_4:4306472-4306491 | None:intergenic | 40.0% | |
| GGAGAATGGAACATTGTACA+AGG | + | chr8_4:4306487-4306506 | Msa1308140:CDS | 40.0% | |
| ! | GACCGTTATTTGCTAGAACT+AGG | - | chr8_4:4306543-4306562 | None:intergenic | 40.0% |
| GCTCATTGAGGAGAAAACAT+TGG | + | chr8_4:4306687-4306706 | Msa1308140:CDS | 40.0% | |
| !! | GACACCGTATATTTGGTTCT+TGG | + | chr8_4:4306771-4306790 | Msa1308140:three_prime_UTR | 40.0% |
| ! | GTTGTACACTCTAGTTTAGG+AGG | + | chr8_4:4306985-4307004 | Msa1308140:three_prime_UTR | 40.0% |
| ! | TGTACACTCTAGTTTAGGAG+GGG | + | chr8_4:4306987-4307006 | Msa1308140:three_prime_UTR | 40.0% |
| GCCACTTGCAATTTACCCTA+TGG | - | chr8_4:4304843-4304862 | None:intergenic | 45.0% | |
| GTAAATTGCAAGTGGCGAAG+TGG | + | chr8_4:4304847-4304866 | Msa1308140:intron | 45.0% | |
| CCTTTAAGTGCCTCTAATGC+TGG | - | chr8_4:4305164-4305183 | None:intergenic | 45.0% | |
| !! | CCAGCATTAGAGGCACTTAA+AGG | + | chr8_4:4305161-4305180 | Msa1308140:CDS | 45.0% |
| GGATGTTGTTGAAGCTTGCA+AGG | + | chr8_4:4305334-4305353 | Msa1308140:CDS | 45.0% | |
| !! | TTATGGTTGGTGGATTCCCA+CGG | + | chr8_4:4305372-4305391 | Msa1308140:CDS | 45.0% |
| TTTCCATTCCTTCCTTCCGT+GGG | - | chr8_4:4305391-4305410 | None:intergenic | 45.0% | |
| TGGTTCATCTCGACCCAAAT+TGG | - | chr8_4:4305636-4305655 | None:intergenic | 45.0% | |
| ! | GACGTCTGGATATTGAGTTG+AGG | - | chr8_4:4305950-4305969 | None:intergenic | 45.0% |
| GCAAAGCAATCTCTTCCACT+AGG | + | chr8_4:4306123-4306142 | Msa1308140:intron | 45.0% | |
| !! | CAGCTTCCTGGCTTTGATAA+TGG | - | chr8_4:4306226-4306245 | None:intergenic | 45.0% |
| ! | ACTTGCTGCTGATAATGCAC+TGG | - | chr8_4:4306250-4306269 | None:intergenic | 45.0% |
| !! | TTGGGTTCTAGGTACACCTA+AGG | + | chr8_4:4306293-4306312 | Msa1308140:CDS | 45.0% |
| TCAGGGAACATGGGTATCAA+TGG | + | chr8_4:4306393-4306412 | Msa1308140:intron | 45.0% | |
| CAGGGAACATGGGTATCAAT+GGG | + | chr8_4:4306394-4306413 | Msa1308140:intron | 45.0% | |
| GGATCTTATGGTATCCAACC+TGG | + | chr8_4:4306430-4306449 | Msa1308140:CDS | 45.0% | |
| AACAGCTCAAGAGCTCATTG+AGG | + | chr8_4:4306675-4306694 | Msa1308140:CDS | 45.0% | |
| GCCACTTGCAATTTACCCTA+TGG | - | chr8_4:4304843-4304862 | None:intergenic | 45.0% | |
| GTAAATTGCAAGTGGCGAAG+TGG | + | chr8_4:4304847-4304866 | Msa1308140:intron | 45.0% | |
| CCTTTAAGTGCCTCTAATGC+TGG | - | chr8_4:4305164-4305183 | None:intergenic | 45.0% | |
| !! | CCAGCATTAGAGGCACTTAA+AGG | + | chr8_4:4305161-4305180 | Msa1308140:CDS | 45.0% |
| GGATGTTGTTGAAGCTTGCA+AGG | + | chr8_4:4305334-4305353 | Msa1308140:CDS | 45.0% | |
| !! | TTATGGTTGGTGGATTCCCA+CGG | + | chr8_4:4305372-4305391 | Msa1308140:CDS | 45.0% |
| TTTCCATTCCTTCCTTCCGT+GGG | - | chr8_4:4305391-4305410 | None:intergenic | 45.0% | |
| TGGTTCATCTCGACCCAAAT+TGG | - | chr8_4:4305636-4305655 | None:intergenic | 45.0% | |
| ! | GACGTCTGGATATTGAGTTG+AGG | - | chr8_4:4305950-4305969 | None:intergenic | 45.0% |
| GCAAAGCAATCTCTTCCACT+AGG | + | chr8_4:4306123-4306142 | Msa1308140:intron | 45.0% | |
| !! | CAGCTTCCTGGCTTTGATAA+TGG | - | chr8_4:4306226-4306245 | None:intergenic | 45.0% |
| ! | ACTTGCTGCTGATAATGCAC+TGG | - | chr8_4:4306250-4306269 | None:intergenic | 45.0% |
| !! | TTGGGTTCTAGGTACACCTA+AGG | + | chr8_4:4306293-4306312 | Msa1308140:CDS | 45.0% |
| TCAGGGAACATGGGTATCAA+TGG | + | chr8_4:4306393-4306412 | Msa1308140:intron | 45.0% | |
| CAGGGAACATGGGTATCAAT+GGG | + | chr8_4:4306394-4306413 | Msa1308140:intron | 45.0% | |
| GGATCTTATGGTATCCAACC+TGG | + | chr8_4:4306430-4306449 | Msa1308140:CDS | 45.0% | |
| AACAGCTCAAGAGCTCATTG+AGG | + | chr8_4:4306675-4306694 | Msa1308140:CDS | 45.0% | |
| GAAAGAACCGGTCACCGTAT+TGG | + | chr8_4:4304690-4304709 | Msa1308140:CDS | 50.0% | |
| TGCAGCACCAGTGACCAATA+CGG | - | chr8_4:4304707-4304726 | None:intergenic | 50.0% | |
| ! | CAAGTGGCGAAGTGGTCTTA+CGG | + | chr8_4:4304855-4304874 | Msa1308140:intron | 50.0% |
| GGCACTTAAAGGGGTGAAGA+TGG | + | chr8_4:4305172-4305191 | Msa1308140:CDS | 50.0% | |
| ! | GCTGCTTTCCCACTTCTTAG+AGG | + | chr8_4:4305206-4305225 | Msa1308140:CDS | 50.0% |
| ATTCCCACGGAAGGAAGGAA+TGG | + | chr8_4:4305385-4305404 | Msa1308140:CDS | 50.0% | |
| CTTTCCATTCCTTCCTTCCG+TGG | - | chr8_4:4305392-4305411 | None:intergenic | 50.0% | |
| CAAGGCTCAAGCTTCAGCTT+TGG | + | chr8_4:4305445-4305464 | Msa1308140:CDS | 50.0% | |
| !! | CGTTTGAAAAGGCACCGTCA+TGG | + | chr8_4:4305552-4305571 | Msa1308140:intron | 50.0% |
| ! | TACTTGTTGCCACGGTTGCA+TGG | - | chr8_4:4305975-4305994 | None:intergenic | 50.0% |
| GCAACCGTGGCAACAAGTAA+TGG | + | chr8_4:4305976-4305995 | Msa1308140:CDS | 50.0% | |
| ! | CTGGCCATTACTTGTTGCCA+CGG | - | chr8_4:4305983-4306002 | None:intergenic | 50.0% |
| ATCACAACTGTTCAGCAGCG+TGG | + | chr8_4:4306195-4306214 | Msa1308140:CDS | 50.0% | |
| TCACAACTGTTCAGCAGCGT+GGG | + | chr8_4:4306196-4306215 | Msa1308140:CDS | 50.0% | |
| TAATGCACTGGACAGCTTCC+TGG | - | chr8_4:4306238-4306257 | None:intergenic | 50.0% | |
| GAAAGAACCGGTCACCGTAT+TGG | + | chr8_4:4304690-4304709 | Msa1308140:CDS | 50.0% | |
| TGCAGCACCAGTGACCAATA+CGG | - | chr8_4:4304707-4304726 | None:intergenic | 50.0% | |
| ! | CAAGTGGCGAAGTGGTCTTA+CGG | + | chr8_4:4304855-4304874 | Msa1308140:intron | 50.0% |
| GGCACTTAAAGGGGTGAAGA+TGG | + | chr8_4:4305172-4305191 | Msa1308140:CDS | 50.0% | |
| ! | GCTGCTTTCCCACTTCTTAG+AGG | + | chr8_4:4305206-4305225 | Msa1308140:CDS | 50.0% |
| ATTCCCACGGAAGGAAGGAA+TGG | + | chr8_4:4305385-4305404 | Msa1308140:CDS | 50.0% | |
| CTTTCCATTCCTTCCTTCCG+TGG | - | chr8_4:4305392-4305411 | None:intergenic | 50.0% | |
| CAAGGCTCAAGCTTCAGCTT+TGG | + | chr8_4:4305445-4305464 | Msa1308140:CDS | 50.0% | |
| !! | CGTTTGAAAAGGCACCGTCA+TGG | + | chr8_4:4305552-4305571 | Msa1308140:intron | 50.0% |
| ! | TACTTGTTGCCACGGTTGCA+TGG | - | chr8_4:4305975-4305994 | None:intergenic | 50.0% |
| GCAACCGTGGCAACAAGTAA+TGG | + | chr8_4:4305976-4305995 | Msa1308140:CDS | 50.0% | |
| ! | CTGGCCATTACTTGTTGCCA+CGG | - | chr8_4:4305983-4306002 | None:intergenic | 50.0% |
| ATCACAACTGTTCAGCAGCG+TGG | + | chr8_4:4306195-4306214 | Msa1308140:CDS | 50.0% | |
| TCACAACTGTTCAGCAGCGT+GGG | + | chr8_4:4306196-4306215 | Msa1308140:CDS | 50.0% | |
| TAATGCACTGGACAGCTTCC+TGG | - | chr8_4:4306238-4306257 | None:intergenic | 50.0% | |
| CCAGTGACCAATACGGTGAC+CGG | - | chr8_4:4304700-4304719 | None:intergenic | 55.0% | |
| !! | GTATTGGTCACTGGTGCTGC+AGG | + | chr8_4:4304706-4304725 | Msa1308140:CDS | 55.0% |
| ! | GGCTCAAGCTTCAGCTTTGG+AGG | + | chr8_4:4305448-4305467 | Msa1308140:CDS | 55.0% |
| ACGGTTGCATGGTTGACGTC+TGG | - | chr8_4:4305964-4305983 | None:intergenic | 55.0% | |
| AGACGTCAACCATGCAACCG+TGG | + | chr8_4:4305963-4305982 | Msa1308140:CDS | 55.0% | |
| CACAACTGTTCAGCAGCGTG+GGG | + | chr8_4:4306197-4306216 | Msa1308140:CDS | 55.0% | |
| ACAACTGTTCAGCAGCGTGG+GGG | + | chr8_4:4306198-4306217 | Msa1308140:CDS | 55.0% | |
| !! | GGGGTGCCATTATCAAAGCC+AGG | + | chr8_4:4306217-4306236 | Msa1308140:CDS | 55.0% |
| CCAGTGACCAATACGGTGAC+CGG | - | chr8_4:4304700-4304719 | None:intergenic | 55.0% | |
| !! | GTATTGGTCACTGGTGCTGC+AGG | + | chr8_4:4304706-4304725 | Msa1308140:CDS | 55.0% |
| ! | GGCTCAAGCTTCAGCTTTGG+AGG | + | chr8_4:4305448-4305467 | Msa1308140:CDS | 55.0% |
| ACGGTTGCATGGTTGACGTC+TGG | - | chr8_4:4305964-4305983 | None:intergenic | 55.0% | |
| AGACGTCAACCATGCAACCG+TGG | + | chr8_4:4305963-4305982 | Msa1308140:CDS | 55.0% | |
| CACAACTGTTCAGCAGCGTG+GGG | + | chr8_4:4306197-4306216 | Msa1308140:CDS | 55.0% | |
| ACAACTGTTCAGCAGCGTGG+GGG | + | chr8_4:4306198-4306217 | Msa1308140:CDS | 55.0% | |
| !! | GGGGTGCCATTATCAAAGCC+AGG | + | chr8_4:4306217-4306236 | Msa1308140:CDS | 55.0% |
| ! | CCGGTCACCGTATTGGTCAC+TGG | + | chr8_4:4304697-4304716 | Msa1308140:CDS | 60.0% |
| !! | GGTTGGTGGATTCCCACGGA+AGG | + | chr8_4:4305376-4305395 | Msa1308140:CDS | 60.0% |
| ! | GGTGGATTCCCACGGAAGGA+AGG | + | chr8_4:4305380-4305399 | Msa1308140:CDS | 60.0% |
| ! | CCGGTCACCGTATTGGTCAC+TGG | + | chr8_4:4304697-4304716 | Msa1308140:CDS | 60.0% |
| !! | GGTTGGTGGATTCCCACGGA+AGG | + | chr8_4:4305376-4305395 | Msa1308140:CDS | 60.0% |
| ! | GGTGGATTCCCACGGAAGGA+AGG | + | chr8_4:4305380-4305399 | Msa1308140:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 4304667 | 4307059 | 4304667 | ID=Msa1308140;Name=Msa1308140 |
| chr8_4 | mRNA | 4304667 | 4307059 | 4304667 | ID=Msa1308140-mRNA-1;Parent=Msa1308140;Name=Msa1308140-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.83|0.71|1|1|1|7|333|337 |
| chr8_4 | exon | 4304667 | 4304727 | 4304667 | ID=Msa1308140-mRNA-1:exon:1318;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4305069 | 4305227 | 4305069 | ID=Msa1308140-mRNA-1:exon:1319;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4305318 | 4305493 | 4305318 | ID=Msa1308140-mRNA-1:exon:1320;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4305760 | 4306037 | 4305760 | ID=Msa1308140-mRNA-1:exon:1321;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4306179 | 4306314 | 4306179 | ID=Msa1308140-mRNA-1:exon:1322;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4306397 | 4306508 | 4306397 | ID=Msa1308140-mRNA-1:exon:1323;Parent=Msa1308140-mRNA-1 |
| chr8_4 | exon | 4306635 | 4307059 | 4306635 | ID=Msa1308140-mRNA-1:exon:1324;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4304667 | 4304727 | 4304667 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4305069 | 4305227 | 4305069 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4305318 | 4305493 | 4305318 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4305760 | 4306037 | 4305760 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4306179 | 4306314 | 4306179 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4306397 | 4306508 | 4306397 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | CDS | 4306635 | 4306726 | 4306635 | ID=Msa1308140-mRNA-1:cds;Parent=Msa1308140-mRNA-1 |
| chr8_4 | three_prime_UTR | 4306727 | 4307059 | 4306727 | ID=Msa1308140-mRNA-1:three_prime_utr;Parent=Msa1308140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
