AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615420 MtrunA17_Chr4g0051891 76.980 543 32 5 50 499 1 543 0.0 800
Msa0615420 MtrunA17_Chr4g0068811 52.555 548 161 7 50 499 1 547 0.0 555
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615420 AT2G34410.2 60.370 540 121 3 50 496 1 540 0.0 638
Msa0615420 AT2G34410.1 60.370 540 121 3 50 496 1 540 0.0 638
Msa0615420 AT5G46340.1 60.223 538 121 5 50 494 1 538 0.0 637
Msa0615420 AT2G34410.3 58.148 540 120 4 50 496 1 527 0.0 607
Msa0615420 AT1G29890.3 59.743 544 122 6 48 496 4 545 0.0 603
Msa0615420 AT1G29890.2 55.746 583 122 7 48 496 4 584 0.0 584
Msa0615420 AT5G46340.2 68.812 404 81 1 50 408 1 404 0.0 583
Msa0615420 AT3G06550.3 51.465 546 167 7 50 499 1 544 0.0 535
Msa0615420 AT3G06550.1 51.371 547 167 8 50 499 1 545 0.0 531
Msa0615420 AT3G06550.2 51.371 547 167 8 50 499 1 545 0.0 530
Msa0615420 AT1G29890.1 59.341 455 88 6 137 496 18 470 4.32e-171 491

Find 139 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCATTTCTTCGTATT+TGG 0.150242 4_2:+64904876 Msa0615420:CDS
CCTCTTTCAGATCTCTTTCT+AGG 0.155574 4_2:+64904785 Msa0615420:CDS
CAAATGAATATACATATATT+TGG 0.199902 4_2:-64912238 None:intergenic
CTTCTGTTTGATGTCGATTA+AGG 0.211721 4_2:-64908082 None:intergenic
CATTCAGGTGTCTTTCTTGC+TGG 0.235342 4_2:+64905463 Msa0615420:intron
AGTATTGGCTCGCAATTAAA+TGG 0.262232 4_2:-64912369 None:intergenic
GCTCTAAAGATTAAATTTCT+TGG 0.275555 4_2:+64912453 Msa0615420:three_prime_UTR
CACACCTGTCCCGGCGTTAT+TGG 0.279936 4_2:-64905010 None:intergenic
TTTACATAGAGAGTTCAATT+TGG 0.308850 4_2:+64911855 Msa0615420:three_prime_UTR
GGATTGGAGATGGTTGTTTC+CGG 0.310123 4_2:+64904986 Msa0615420:CDS
AAAATTGGTCTAAATTCCTT+TGG 0.311185 4_2:-64912058 None:intergenic
AATAATGATACATTAGAAAA+AGG 0.322815 4_2:-64908619 None:intergenic
ATTCTTTCTTGCTAGAAAAT+CGG 0.324655 4_2:+64906688 Msa0615420:CDS
CATTTGTGCGCACACGTATA+AGG 0.329171 4_2:+64912090 Msa0615420:three_prime_UTR
ATTTAATTGCGAGCCAATAC+TGG 0.336703 4_2:+64912371 Msa0615420:three_prime_UTR
CAAATGAAGCTACAGAAAAT+TGG 0.341013 4_2:-64912073 None:intergenic
ACTGCATCAGGTATAAATAT+TGG 0.341617 4_2:+64911991 Msa0615420:three_prime_UTR
GATATTAATCTTGATGAGTT+GGG 0.343114 4_2:+64906448 Msa0615420:CDS
AAATTGGTCTAAATTCCTTT+GGG 0.346491 4_2:-64912057 None:intergenic
TAAATTTCTTGGCGGCAAAC+TGG 0.346500 4_2:+64912464 Msa0615420:three_prime_UTR
GCCGCGTATGTTTGGATGAC+TGG 0.350707 4_2:+64908683 Msa0615420:CDS
CTGGGCTTGATCGCTACATT+TGG 0.363021 4_2:+64909707 Msa0615420:CDS
CGGGGAACATCAGGCTTTGC+AGG 0.364551 4_2:-64909661 None:intergenic
GTTGGGGAAGGATACAATTA+AGG 0.366302 4_2:+64906465 Msa0615420:CDS
GAAATGCCACTCATGCATTC+GGG 0.372824 4_2:-64909680 None:intergenic
AGAGCCAGAATATAAACATT+TGG 0.373921 4_2:-64912435 None:intergenic
CATGAGTGGCATTTCAGATC+TGG 0.382603 4_2:+64909688 Msa0615420:CDS
TGCGATCGAACCGACTTACT+TGG 0.395497 4_2:+64906849 Msa0615420:CDS
CTCTTTCAGATCTCTTTCTA+GGG 0.396407 4_2:+64904786 Msa0615420:CDS
CTTTCTAGGTTGGGTATATG+TGG 0.397170 4_2:+64910083 Msa0615420:intron
TAGAAAATCGGGCAACTTTG+AGG 0.397833 4_2:+64906700 Msa0615420:CDS
ACATTTCACAGTTTCACATT+TGG 0.398622 4_2:+64910564 Msa0615420:CDS
TGAAATGCCACTCATGCATT+CGG 0.399056 4_2:-64909681 None:intergenic
TTCTTTCTTGCTAGAAAATC+GGG 0.399754 4_2:+64906689 Msa0615420:CDS
AAGCCCTGCTTCCAGCAAAA+TGG 0.402771 4_2:-64906500 None:intergenic
CTGTCAAATTAAATTTGATT+CGG 0.406682 4_2:+64906557 Msa0615420:CDS
GATCGCTACATTTGGATAGT+TGG 0.413676 4_2:+64909715 Msa0615420:CDS
GTGTTACAAATTTGTTGTCT+TGG 0.414300 4_2:+64912129 Msa0615420:three_prime_UTR
ATACTACTTCCAACAACTAT+AGG 0.419475 4_2:-64911960 None:intergenic
ACATACCAAATACGAAGAAA+TGG 0.420968 4_2:-64904881 None:intergenic
ATTCAGGTGTCTTTCTTGCT+GGG 0.422182 4_2:+64905464 Msa0615420:intron
TACCATTTCAGGTTGAGAAA+TGG 0.426265 4_2:+64909844 Msa0615420:intron
TCATGCATTCGGGGAACATC+AGG 0.432868 4_2:-64909670 None:intergenic
AGAGTTGACAAAAGTTTACT+TGG 0.434260 4_2:-64912501 None:intergenic
TTGGCGTTGGTTTGTGTTGG+AGG 0.436544 4_2:+64912010 Msa0615420:three_prime_UTR
CACAGTTTCACATTTGGTTG+AGG 0.440729 4_2:+64910570 Msa0615420:CDS
CGTTGGTTTGTGTTGGAGGT+TGG 0.445732 4_2:+64912014 Msa0615420:three_prime_UTR
AGATATTAATCTTGATGAGT+TGG 0.446340 4_2:+64906447 Msa0615420:CDS
GGAATTTCACTCAGCACTTA+CGG 0.453761 4_2:+64910360 Msa0615420:CDS
TACAATTAAGGAAGATGATC+GGG 0.455895 4_2:+64906477 Msa0615420:CDS
TATGTTTGGATGACTGGGTT+TGG 0.456262 4_2:+64908689 Msa0615420:CDS
TACAGAAATTGAACACAAAC+GGG 0.460054 4_2:-64912180 None:intergenic
TAGCCTTCCACGCTTTGCTC+AGG 0.462259 4_2:+64908745 Msa0615420:CDS
AGCAATGTTCCTATAGTTGT+TGG 0.462404 4_2:+64911951 Msa0615420:three_prime_UTR
TTTATACCTGATGCAGTGAA+TGG 0.464073 4_2:-64911985 None:intergenic
TTACAGAAATTGAACACAAA+CGG 0.464156 4_2:-64912181 None:intergenic
TTATACCTGATGCAGTGAAT+GGG 0.466439 4_2:-64911984 None:intergenic
GCAATATAAAGAAACAGAAA+TGG 0.467324 4_2:-64911681 None:intergenic
GTGGCTTGGCAAGATTACTT+TGG 0.468746 4_2:+64910535 Msa0615420:CDS
AATAAGAATACATGGGAATG+TGG 0.471066 4_2:+64911912 Msa0615420:three_prime_UTR
GTATCCCCATTCACTGCATC+AGG 0.472650 4_2:+64911979 Msa0615420:three_prime_UTR
AATGGTAACACAAGCAATCA+TGG 0.478567 4_2:-64912351 None:intergenic
CTGTCCCGGCGTTATTGGTC+CGG 0.482949 4_2:-64905005 None:intergenic
TTTGATGGTGTATGGAGCAT+TGG 0.483273 4_2:+64909000 Msa0615420:CDS
CGAACCACATATTCCAGTAT+TGG 0.488386 4_2:-64912384 None:intergenic
TTATGGATTATCAGGTGGCT+TGG 0.490359 4_2:+64910521 Msa0615420:intron
AGAAAAGTAACAATCAAAAC+CGG 0.491834 4_2:+64909897 Msa0615420:CDS
CCGCGTATGTTTGGATGACT+GGG 0.492460 4_2:+64908684 Msa0615420:CDS
AGAAAATCGGGCAACTTTGA+GGG 0.494575 4_2:+64906701 Msa0615420:CDS
ATGAGTGGCATTTCAGATCT+GGG 0.495759 4_2:+64909689 Msa0615420:CDS
GGGTACAAACACTGTCTTGA+GGG 0.498699 4_2:-64911612 None:intergenic
ATCGACATCAAACAGAAGAA+TGG 0.499505 4_2:+64908087 Msa0615420:CDS
CTAAAGATTAAATTTCTTGG+CGG 0.503719 4_2:+64912456 Msa0615420:three_prime_UTR
TTGATGGTGTATGGAGCATT+GGG 0.504823 4_2:+64909001 Msa0615420:CDS
TATTACATTTGGATGGAAGT+AGG 0.508514 4_2:-64909749 None:intergenic
TGGATTAAAATAAGAATACA+TGG 0.508700 4_2:+64911904 Msa0615420:three_prime_UTR
TATTCATTTGACAATCTTAG+CGG 0.509483 4_2:+64912251 Msa0615420:three_prime_UTR
TATATGATATTACATTTGGA+TGG 0.516930 4_2:-64909756 None:intergenic
CGGACCAATAACGCCGGGAC+AGG 0.524763 4_2:+64905006 Msa0615420:CDS
TTACCGTTGAATGAGGGATC+TGG 0.524859 4_2:-64911721 None:intergenic
TGGAGGTTGGCATATGAAGA+GGG 0.526352 4_2:+64912027 Msa0615420:three_prime_UTR
AAACAGAAGAATGGAAAGGA+TGG 0.535548 4_2:+64908096 Msa0615420:CDS
CCTAGAAAGAGATCTGAAAG+AGG 0.535917 4_2:-64904785 None:intergenic
TAGAGGCTTACCGTTGAATG+AGG 0.538418 4_2:-64911728 None:intergenic
ATACAATTAAGGAAGATGAT+CGG 0.538605 4_2:+64906476 Msa0615420:CDS
CTAGATTGGAGGATTGGAGA+TGG 0.539629 4_2:+64904976 Msa0615420:intron
TTTGTTTAGGTTCTTGACCA+TGG 0.540898 4_2:+64906662 Msa0615420:intron
TTGACTTGTTACATATGTGA+AGG 0.541460 4_2:+64912211 Msa0615420:three_prime_UTR
ATATTGGCGTTGGTTTGTGT+TGG 0.543664 4_2:+64912007 Msa0615420:three_prime_UTR
TTGTGAACTATCGTTACACT+TGG 0.553541 4_2:+64912407 Msa0615420:three_prime_UTR
TCACCTGAGCAAAGCGTGGA+AGG 0.554785 4_2:-64908748 None:intergenic
TTCAATTTGGATTGACTGTG+CGG 0.555942 4_2:+64911868 Msa0615420:three_prime_UTR
CGAGCCAATACTGGAATATG+TGG 0.556725 4_2:+64912380 Msa0615420:three_prime_UTR
TTGTACCCACAAAAGACAAT+CGG 0.558713 4_2:+64911627 Msa0615420:CDS
GTGATTAAAACTTGTTAACA+AGG 0.561356 4_2:-64912530 None:intergenic
TCAGGTATAAATATTGGCGT+TGG 0.561550 4_2:+64911997 Msa0615420:three_prime_UTR
GTTTCCGGACCAATAACGCC+GGG 0.565038 4_2:+64905001 Msa0615420:CDS
ATAAGAATACATGGGAATGT+GGG 0.567379 4_2:+64911913 Msa0615420:three_prime_UTR
GAAAGAGATCTGAAAGAGGA+AGG 0.568587 4_2:-64904781 None:intergenic
TCAGCGTTTATATTTGCTTG+AGG 0.570424 4_2:+64910339 Msa0615420:intron
TTACACTTTAGTAGGAGAAG+AGG 0.572616 4_2:-64905543 None:intergenic
TAATCTTGATGAGTTGGGGA+AGG 0.573324 4_2:+64906453 Msa0615420:CDS
ATTTCAGGTTGAGAAATGGA+TGG 0.582565 4_2:+64909848 Msa0615420:intron
ATATTAATCTTGATGAGTTG+GGG 0.583700 4_2:+64906449 Msa0615420:CDS
TACGAAGAAATGGAAGAAGT+AGG 0.586569 4_2:-64904871 None:intergenic
AAAGAAAACGTACGCAAAGA+GGG 0.587446 4_2:-64910396 None:intergenic
AGAATGGAAAGGATGGATGC+AGG 0.588267 4_2:+64908103 Msa0615420:CDS
GGAGGTTGGCATATGAAGAG+GGG 0.589802 4_2:+64912028 Msa0615420:three_prime_UTR
GAGTTGACAAAAGTTTACTT+GGG 0.591349 4_2:-64912500 None:intergenic
TGTAGAATCTCCAAGTAAGT+CGG 0.594056 4_2:-64906859 None:intergenic
TAAAGCAACTGACACAATGC+CGG 0.594297 4_2:-64909916 None:intergenic
TAAAGAAAACGTACGCAAAG+AGG 0.596057 4_2:-64910397 None:intergenic
GTATGAATACATATACAAGC+TGG 0.597831 4_2:+64910105 Msa0615420:CDS
GACTGTGCGGAAAGGAAGCT+AGG 0.598805 4_2:+64911881 Msa0615420:three_prime_UTR
TTGGAGGTTGGCATATGAAG+AGG 0.604629 4_2:+64912026 Msa0615420:three_prime_UTR
AATTGGTCTAAATTCCTTTG+GGG 0.606897 4_2:-64912056 None:intergenic
TTTGGATTGACTGTGCGGAA+AGG 0.609083 4_2:+64911873 Msa0615420:three_prime_UTR
AAATGCCACTCATGCATTCG+GGG 0.609449 4_2:-64909679 None:intergenic
CTATAAGCAGAAGAATGAAG+AGG 0.615193 4_2:-64907992 None:intergenic
CATCAAACAGAAGAATGGAA+AGG 0.623729 4_2:+64908092 Msa0615420:CDS
TATACCTGATGCAGTGAATG+GGG 0.627279 4_2:-64911983 None:intergenic
GCTCCAGATCCCTCATTCAA+CGG 0.632555 4_2:+64911718 Msa0615420:CDS
AGAGGCTTACCGTTGAATGA+GGG 0.634409 4_2:-64911727 None:intergenic
TAGCAAGAAAGAATCATCCA+TGG 0.634446 4_2:-64906679 None:intergenic
TATATCACCTGAGCAAAGCG+TGG 0.636873 4_2:-64908752 None:intergenic
TACCCACAAAAGACAATCGG+CGG 0.641838 4_2:+64911630 Msa0615420:CDS
GGATTAAAATAAGAATACAT+GGG 0.654475 4_2:+64911905 Msa0615420:three_prime_UTR
CTTACTTGGAGATTCTACAA+AGG 0.655302 4_2:+64906863 Msa0615420:CDS
TGTTTCCGGACCAATAACGC+CGG 0.655486 4_2:+64905000 Msa0615420:CDS
ATGTTCCCCGAATGCATGAG+TGG 0.657515 4_2:+64909674 Msa0615420:CDS
CCCAGTCATCCAAACATACG+CGG 0.659192 4_2:-64908684 None:intergenic
TTGTGCGCACACGTATAAGG+AGG 0.666935 4_2:+64912093 Msa0615420:three_prime_UTR
ATACATATACAAGCTGGACA+AGG 0.683884 4_2:+64910111 Msa0615420:CDS
TGGGTACAAACACTGTCTTG+AGG 0.684338 4_2:-64911613 None:intergenic
GTTGAGAACGATACAGCAGA+AGG 0.687635 4_2:-64908930 None:intergenic
GAAGAGGGGATTAACCCCAA+AGG 0.690174 4_2:+64912042 Msa0615420:three_prime_UTR
AAAGTGCCTTGCAGATGATG+TGG 0.694227 4_2:+64908888 Msa0615420:intron
TGTGCGGAAAGGAAGCTAGG+TGG 0.697556 4_2:+64911884 Msa0615420:three_prime_UTR
GTGCCTTGCAGATGATGTGG+CGG 0.703227 4_2:+64908891 Msa0615420:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATTTATGATAGTTTT+TGG + chr4_2:64905400-64905419 Msa0615420:intron 10.0%
!! TATTAAATTTAAACACATAA+AGG - chr4_2:64907871-64907890 None:intergenic 10.0%
!! AAAAATATGTTACATAAAAA+TGG - chr4_2:64908797-64908816 None:intergenic 10.0%
!! CTCAATTAATTTATAAATAT+GGG + chr4_2:64910639-64910658 Msa0615420:intron 10.0%
!!! TTTTAATCAATTTTCTAGAT+TGG + chr4_2:64904962-64904981 Msa0615420:intron 15.0%
!!! AAAATTACCAATATGTTTTT+AGG - chr4_2:64906786-64906805 None:intergenic 15.0%
!!! GAACTTGAAATATTTTTATA+TGG + chr4_2:64906934-64906953 Msa0615420:intron 15.0%
!!! AATTTACACTACTTTTTTTT+TGG - chr4_2:64907369-64907388 None:intergenic 15.0%
!! AGAAAATAATAAACTACAAA+TGG - chr4_2:64907917-64907936 None:intergenic 15.0%
!!! TTATGTTACTTTTTTTAGTA+TGG + chr4_2:64908326-64908345 Msa0615420:intron 15.0%
!! AATAATGATACATTAGAAAA+AGG - chr4_2:64908622-64908641 None:intergenic 15.0%
!!! ATCTTTTCTGATATAATAAT+AGG - chr4_2:64908723-64908742 None:intergenic 15.0%
!! AAACATAAATAGTAGATTAT+GGG - chr4_2:64909296-64909315 None:intergenic 15.0%
!! TTGATTTACTATAATAAGAA+AGG + chr4_2:64909574-64909593 Msa0615420:intron 15.0%
!! ATAATTAGAAAATCAATAGA+TGG - chr4_2:64910304-64910323 None:intergenic 15.0%
!! AACAAATATTAGTAGAAAAT+AGG - chr4_2:64910484-64910503 None:intergenic 15.0%
!! CCATATTTATAAATTAATTG+AGG - chr4_2:64910641-64910660 None:intergenic 15.0%
!! CCTCAATTAATTTATAAATA+TGG + chr4_2:64910638-64910657 Msa0615420:intron 15.0%
!!! TTCTAAAATATGTCTTATAT+TGG + chr4_2:64911076-64911095 Msa0615420:intron 15.0%
!! CAAAATTTGGAAAAATTATA+TGG + chr4_2:64911107-64911126 Msa0615420:intron 15.0%
!!! TTTTGCATAATTTTATTACT+GGG + chr4_2:64911654-64911673 Msa0615420:CDS 15.0%
!! CAAATGAATATACATATATT+TGG - chr4_2:64912241-64912260 None:intergenic 15.0%
!!! AATTTTAACTTCAATGTGAA+TGG + chr4_2:64905244-64905263 Msa0615420:intron 20.0%
!! TAAAAAACTTACACTTTAGT+AGG - chr4_2:64905554-64905573 None:intergenic 20.0%
!!! CATATTTATCTAAAGCATTA+TGG - chr4_2:64905697-64905716 None:intergenic 20.0%
!!! TATTTCAATTTTGATGTGAT+TGG + chr4_2:64905754-64905773 Msa0615420:intron 20.0%
!! ATAATAGGTAAATTACTGAA+TGG + chr4_2:64905941-64905960 Msa0615420:intron 20.0%
!!! TGAAATTCAATTTTTGAAGT+AGG - chr4_2:64906331-64906350 None:intergenic 20.0%
!! CTGTCAAATTAAATTTGATT+CGG + chr4_2:64906557-64906576 Msa0615420:CDS 20.0%
!! ACAAAACAAGTAAAAAGATA+AGG - chr4_2:64906647-64906666 None:intergenic 20.0%
!!! TCTTTTTACTTGTTTTGTTT+AGG + chr4_2:64906649-64906668 Msa0615420:intron 20.0%
!!! ATTTTGAATGAACTTGATTT+TGG + chr4_2:64907258-64907277 Msa0615420:intron 20.0%
!!! ATTTTGGAAAATTGAGTTTA+CGG + chr4_2:64907274-64907293 Msa0615420:intron 20.0%
!!! TTTGAAATATTTATATCCAC+TGG + chr4_2:64907813-64907832 Msa0615420:intron 20.0%
!! TTGAAATATTTATATCCACT+GGG + chr4_2:64907814-64907833 Msa0615420:intron 20.0%
!!! ATTATAGTTCTGTCAAAAAA+AGG - chr4_2:64907955-64907974 None:intergenic 20.0%
!!! TTTTTTGACAGAACTATAAT+CGG + chr4_2:64907955-64907974 Msa0615420:intron 20.0%
!!! AATCTCTATTTACAAGTTTT+CGG - chr4_2:64908151-64908170 None:intergenic 20.0%
!!! TACTTTTGACCATAATTTTT+AGG - chr4_2:64908192-64908211 None:intergenic 20.0%
!! GTTATAAAAAAGAGTAAGTT+TGG - chr4_2:64908535-64908554 None:intergenic 20.0%
!!! ACTTACTCTTTTTTATAACA+TGG + chr4_2:64908536-64908555 Msa0615420:intron 20.0%
!!! ATGTAACATATTTTTTCAGA+TGG + chr4_2:64908802-64908821 Msa0615420:intron 20.0%
!! CAAACATAAATAGTAGATTA+TGG - chr4_2:64909297-64909316 None:intergenic 20.0%
!!! AACCAATACAATTTTGTAAA+CGG - chr4_2:64909400-64909419 None:intergenic 20.0%
!!! TATACAACTTGTTTTTAAAG+GGG - chr4_2:64909507-64909526 None:intergenic 20.0%
!!! GTATACAACTTGTTTTTAAA+GGG - chr4_2:64909508-64909527 None:intergenic 20.0%
!!! TGTATACAACTTGTTTTTAA+AGG - chr4_2:64909509-64909528 None:intergenic 20.0%
!! TCATAATAGTAATCTTCATA+TGG + chr4_2:64909624-64909643 Msa0615420:intron 20.0%
!! TATATGATATTACATTTGGA+TGG - chr4_2:64909759-64909778 None:intergenic 20.0%
!! CTAGTATATGATATTACATT+TGG - chr4_2:64909763-64909782 None:intergenic 20.0%
!!! TCTTTTTCTTTTTTCTTTCT+AGG + chr4_2:64910069-64910088 Msa0615420:intron 20.0%
!!! CTAGTTTTTAATTACTTAAC+TGG - chr4_2:64911353-64911372 None:intergenic 20.0%
!! ATTCAATACATTGCTAAATT+AGG + chr4_2:64911394-64911413 Msa0615420:intron 20.0%
!!! TTTATTTATCTTCAAGTTTC+AGG + chr4_2:64911496-64911515 Msa0615420:intron 20.0%
!!! CTTTTGCATAATTTTATTAC+TGG + chr4_2:64911653-64911672 Msa0615420:CDS 20.0%
!!! TTTGCATAATTTTATTACTG+GGG + chr4_2:64911655-64911674 Msa0615420:CDS 20.0%
!!! TATTTTTATTTGATGCTGAT+AGG + chr4_2:64911809-64911828 Msa0615420:intron 20.0%
!! TGGATTAAAATAAGAATACA+TGG + chr4_2:64911904-64911923 Msa0615420:three_prime_UTR 20.0%
!! GGATTAAAATAAGAATACAT+GGG + chr4_2:64911905-64911924 Msa0615420:three_prime_UTR 20.0%
!!! ATACAATAGTTTTGTTTTGA+TGG + chr4_2:64912328-64912347 Msa0615420:three_prime_UTR 20.0%
!!! TTTTCCAAATGTTTATATTC+TGG + chr4_2:64912431-64912450 Msa0615420:three_prime_UTR 20.0%
! TTGAAGAATAGAGAAAATGT+CGG - chr4_2:64904751-64904770 None:intergenic 25.0%
!! TAATCAATTTTCTAGATTGG+AGG + chr4_2:64904965-64904984 Msa0615420:intron 25.0%
! GATTAATTAATTGTGCTGAA+TGG + chr4_2:64905075-64905094 Msa0615420:intron 25.0%
!! TTATTCCAGTTTTTGTTACA+TGG + chr4_2:64905489-64905508 Msa0615420:CDS 25.0%
! TATATCCATGTAACAAAAAC+TGG - chr4_2:64905497-64905516 None:intergenic 25.0%
!!! AAGTTTTTTAACACTGTCAT+AGG + chr4_2:64905564-64905583 Msa0615420:intron 25.0%
!!! TCAATTGATTCGAGTTTATT+AGG + chr4_2:64905604-64905623 Msa0615420:intron 25.0%
! AAAATTGAAATACCATGAAG+TGG - chr4_2:64905746-64905765 None:intergenic 25.0%
!! TAAGTCTTTGATGAAGTATT+TGG + chr4_2:64905797-64905816 Msa0615420:intron 25.0%
!! AAGTCTTTGATGAAGTATTT+GGG + chr4_2:64905798-64905817 Msa0615420:intron 25.0%
! ATCTGTAAGTAATTGTAACA+CGG - chr4_2:64905886-64905905 None:intergenic 25.0%
! AGTAGTATATTTAGCAAATC+TGG + chr4_2:64905970-64905989 Msa0615420:intron 25.0%
! ATATTTCTTCATGTCTCAAA+TGG + chr4_2:64906095-64906114 Msa0615420:intron 25.0%
! AGATATTAATCTTGATGAGT+TGG + chr4_2:64906447-64906466 Msa0615420:CDS 25.0%
! GATATTAATCTTGATGAGTT+GGG + chr4_2:64906448-64906467 Msa0615420:CDS 25.0%
! ATATTAATCTTGATGAGTTG+GGG + chr4_2:64906449-64906468 Msa0615420:CDS 25.0%
! ATACAATTAAGGAAGATGAT+CGG + chr4_2:64906476-64906495 Msa0615420:CDS 25.0%
!! TTTTTATGATATGCAATGTC+AGG + chr4_2:64906584-64906603 Msa0615420:intron 25.0%
!! TTTTATGATATGCAATGTCA+GGG + chr4_2:64906585-64906604 Msa0615420:intron 25.0%
! ATTCTTTCTTGCTAGAAAAT+CGG + chr4_2:64906688-64906707 Msa0615420:CDS 25.0%
! TCTGAATCCTAAAAACATAT+TGG + chr4_2:64906776-64906795 Msa0615420:intron 25.0%
!!! ACATATTGGTAATTTTCTAC+AGG + chr4_2:64906790-64906809 Msa0615420:intron 25.0%
!!! CATATTGGTAATTTTCTACA+GGG + chr4_2:64906791-64906810 Msa0615420:intron 25.0%
! ACAAGTGGAAATATAATAAG+TGG - chr4_2:64906899-64906918 None:intergenic 25.0%
! TTTCCTTCTTTGTAATTGTT+TGG + chr4_2:64907005-64907024 Msa0615420:intron 25.0%
! AAACCAAACAATTACAAAGA+AGG - chr4_2:64907011-64907030 None:intergenic 25.0%
! CTATTCACAAGTTATTGAAA+AGG + chr4_2:64907129-64907148 Msa0615420:intron 25.0%
! ATGATACATCAAAGTGTATA+CGG - chr4_2:64907559-64907578 None:intergenic 25.0%
! AATTGTTGCATAAAGTACAT+TGG - chr4_2:64907737-64907756 None:intergenic 25.0%
! TTTGTTCAAACAAAGTTATC+AGG + chr4_2:64907758-64907777 Msa0615420:intron 25.0%
!! TTTTTGACAGAACTATAATC+GGG + chr4_2:64907956-64907975 Msa0615420:intron 25.0%
!!! TTTTGACCATAATTTTTAGG+AGG - chr4_2:64908189-64908208 None:intergenic 25.0%
! AAAATGTCAATGAACAGAAA+AGG - chr4_2:64908224-64908243 None:intergenic 25.0%
! AAAATCATCTGAGTTCTATT+TGG + chr4_2:64908292-64908311 Msa0615420:intron 25.0%
!! AGTATTCCATAATATTTTCC+TGG - chr4_2:64908377-64908396 None:intergenic 25.0%
!! TATTTGCTGATGTTATTGTT+CGG + chr4_2:64908585-64908604 Msa0615420:intron 25.0%
! TTACATAAAAATGGTTCTCA+GGG - chr4_2:64908788-64908807 None:intergenic 25.0%
! AGAATAATTCAAAGAATCCT+GGG - chr4_2:64909114-64909133 None:intergenic 25.0%
! AACTATTGTAAACAACAGAA+GGG - chr4_2:64909368-64909387 None:intergenic 25.0%
! TAACTATTGTAAACAACAGA+AGG - chr4_2:64909369-64909388 None:intergenic 25.0%
!! ACCAATACAATTTTGTAAAC+GGG - chr4_2:64909399-64909418 None:intergenic 25.0%
!!! ATACAACTTGTTTTTAAAGG+GGG - chr4_2:64909506-64909525 None:intergenic 25.0%
! CTATAATAAGAAAGGTAATC+TGG + chr4_2:64909582-64909601 Msa0615420:intron 25.0%
! ATTATGAACTTGCAGTAAAA+AGG - chr4_2:64909611-64909630 None:intergenic 25.0%
! TATGTCAAACTTAAAATTGC+TGG - chr4_2:64909821-64909840 None:intergenic 25.0%
!! TTGACATATTTTACCATTTC+AGG + chr4_2:64909833-64909852 Msa0615420:intron 25.0%
! AGAAAAGTAACAATCAAAAC+CGG + chr4_2:64909897-64909916 Msa0615420:CDS 25.0%
! TAAAACCATTTGCTTATTCA+TGG + chr4_2:64909965-64909984 Msa0615420:intron 25.0%
! AAAAACCATGAATAAGCAAA+TGG - chr4_2:64909973-64909992 None:intergenic 25.0%
!!! TTTCTTTTTTCTTTCTAGGT+TGG + chr4_2:64910073-64910092 Msa0615420:intron 25.0%
!!! TTCTTTTTTCTTTCTAGGTT+GGG + chr4_2:64910074-64910093 Msa0615420:intron 25.0%
! ACAAATAAAACATGAAGAAC+AGG - chr4_2:64910216-64910235 None:intergenic 25.0%
! ACATGGAATTTCAGTAATTA+AGG - chr4_2:64910423-64910442 None:intergenic 25.0%
! TAATTACTGAAATTCCATGT+TGG + chr4_2:64910423-64910442 Msa0615420:intron 25.0%
! AATTACTGAAATTCCATGTT+GGG + chr4_2:64910424-64910443 Msa0615420:intron 25.0%
!!! TGATGGATTTTGCTTTTATT+TGG + chr4_2:64910453-64910472 Msa0615420:intron 25.0%
!! TCATCAATCTAAAGTAAGTA+AGG - chr4_2:64910849-64910868 None:intergenic 25.0%
! ATCATGAATAGAAAAACTTC+AGG + chr4_2:64911003-64911022 Msa0615420:intron 25.0%
! AAAACATCTTCGCAATAAAA+AGG - chr4_2:64911043-64911062 None:intergenic 25.0%
! ATTGGATCATGAACAAAATT+TGG + chr4_2:64911094-64911113 Msa0615420:intron 25.0%
! TCAATTACACATCTTACTAA+GGG - chr4_2:64911154-64911173 None:intergenic 25.0%
! ATCAATTACACATCTTACTA+AGG - chr4_2:64911155-64911174 None:intergenic 25.0%
!!! CTATTTTGACATTATTTTGC+AGG + chr4_2:64911559-64911578 Msa0615420:intron 25.0%
! GCAATATAAAGAAACAGAAA+TGG - chr4_2:64911684-64911703 None:intergenic 25.0%
!! TCTCTATGTAAACTCTTTTT+GGG - chr4_2:64911847-64911866 None:intergenic 25.0%
! TTTACATAGAGAGTTCAATT+TGG + chr4_2:64911855-64911874 Msa0615420:three_prime_UTR 25.0%
!! AAATTGGTCTAAATTCCTTT+GGG - chr4_2:64912060-64912079 None:intergenic 25.0%
!! AAAATTGGTCTAAATTCCTT+TGG - chr4_2:64912061-64912080 None:intergenic 25.0%
! TTACAGAAATTGAACACAAA+CGG - chr4_2:64912184-64912203 None:intergenic 25.0%
! TATTCATTTGACAATCTTAG+CGG + chr4_2:64912251-64912270 Msa0615420:three_prime_UTR 25.0%
!!! AAACAGACCTATTTTTACAA+GGG - chr4_2:64912292-64912311 None:intergenic 25.0%
!!! GCTCTAAAGATTAAATTTCT+TGG + chr4_2:64912453-64912472 Msa0615420:three_prime_UTR 25.0%
! CTAAAGATTAAATTTCTTGG+CGG + chr4_2:64912456-64912475 Msa0615420:three_prime_UTR 25.0%
!!! GTGATTAAAACTTGTTAACA+AGG - chr4_2:64912533-64912552 None:intergenic 25.0%
TTCTTCCATTTCTTCGTATT+TGG + chr4_2:64904876-64904895 Msa0615420:CDS 30.0%
ACATACCAAATACGAAGAAA+TGG - chr4_2:64904884-64904903 None:intergenic 30.0%
! AATTTTCTAGATTGGAGGAT+TGG + chr4_2:64904970-64904989 Msa0615420:intron 30.0%
! TAGTTGTGATTTTTGTGATC+TGG + chr4_2:64905134-64905153 Msa0615420:intron 30.0%
!! TGATAGTTTTTGGATGATGT+TGG + chr4_2:64905410-64905429 Msa0615420:intron 30.0%
! TGATGTTGGCAATTTTATGA+TGG + chr4_2:64905424-64905443 Msa0615420:intron 30.0%
!! GCTTTGTTTATTATGCATTC+AGG + chr4_2:64905448-64905467 Msa0615420:intron 30.0%
GTGTTTGCTTATCAAGTTTA+CGG + chr4_2:64905857-64905876 Msa0615420:intron 30.0%
TCTGTAAGTAATTGTAACAC+GGG - chr4_2:64905885-64905904 None:intergenic 30.0%
!!! TGACAAAAGCTTTGAACTTT+TGG + chr4_2:64906030-64906049 Msa0615420:intron 30.0%
CAATCAAAACTGCAATCATA+TGG + chr4_2:64906148-64906167 Msa0615420:intron 30.0%
ACTGCAATCATATGGTAATT+TGG + chr4_2:64906156-64906175 Msa0615420:intron 30.0%
TATGGTAATTTGGTATCAGA+AGG + chr4_2:64906166-64906185 Msa0615420:intron 30.0%
AACATAAACACCTACTAATG+TGG + chr4_2:64906201-64906220 Msa0615420:intron 30.0%
AACATAGTATCCACATTAGT+AGG - chr4_2:64906214-64906233 None:intergenic 30.0%
AACATAAGTAGATCCAAGAT+GGG - chr4_2:64906238-64906257 None:intergenic 30.0%
AAACATAAGTAGATCCAAGA+TGG - chr4_2:64906239-64906258 None:intergenic 30.0%
! TCTTCATTGATGCACTTTTA+TGG + chr4_2:64906296-64906315 Msa0615420:intron 30.0%
! CTATGATAGTTTTTGACACA+TGG + chr4_2:64906353-64906372 Msa0615420:intron 30.0%
TACAATTAAGGAAGATGATC+GGG + chr4_2:64906477-64906496 Msa0615420:CDS 30.0%
TTTATGATATGCAATGTCAG+GGG + chr4_2:64906586-64906605 Msa0615420:intron 30.0%
TTCTTTCTTGCTAGAAAATC+GGG + chr4_2:64906689-64906708 Msa0615420:CDS 30.0%
AAACTAAAACACTGTGAACT+GGG - chr4_2:64907212-64907231 None:intergenic 30.0%
!!! TCACAGTGTTTTAGTTTGTT+TGG + chr4_2:64907215-64907234 Msa0615420:intron 30.0%
!!! CACAGTGTTTTAGTTTGTTT+GGG + chr4_2:64907216-64907235 Msa0615420:intron 30.0%
! GTGATAAAGTAGTTTGTGTT+CGG - chr4_2:64907398-64907417 None:intergenic 30.0%
TATCACTTCTTGTTAAACCA+AGG + chr4_2:64907412-64907431 Msa0615420:intron 30.0%
TCCTATGTAAAAGCAAGTTT+GGG + chr4_2:64907502-64907521 Msa0615420:intron 30.0%
TATACGGCTAATTGCATAAT+GGG - chr4_2:64907543-64907562 None:intergenic 30.0%
!! TCTGTTAGTTCTTTTTCACT+AGG + chr4_2:64907593-64907612 Msa0615420:intron 30.0%
GCTAAGAGTAAAAATTGACA+AGG - chr4_2:64907688-64907707 None:intergenic 30.0%
TATTATATCTATAGACCCAG+TGG - chr4_2:64907832-64907851 None:intergenic 30.0%
! TAGTTCTGTCAAAAAAAGGA+AGG - chr4_2:64907951-64907970 None:intergenic 30.0%
TGCTTACCTCCTAAAAATTA+TGG + chr4_2:64908180-64908199 Msa0615420:intron 30.0%
!! GTATCATTATTTTGCTGCTA+CGG + chr4_2:64908631-64908650 Msa0615420:CDS 30.0%
GTTACATAAAAATGGTTCTC+AGG - chr4_2:64908789-64908808 None:intergenic 30.0%
!!! CTTTTTACTTTGATGGTGTA+TGG + chr4_2:64908992-64909011 Msa0615420:CDS 30.0%
CAGAATAATTCAAAGAATCC+TGG - chr4_2:64909115-64909134 None:intergenic 30.0%
CAGGATTCTTTGAATTATTC+TGG + chr4_2:64909113-64909132 Msa0615420:intron 30.0%
AACCCAAAAAGAATGCAAAT+GGG - chr4_2:64909141-64909160 None:intergenic 30.0%
TAACCCAAAAAGAATGCAAA+TGG - chr4_2:64909142-64909161 None:intergenic 30.0%
ACTATTGTAAACAACAGAAG+GGG - chr4_2:64909367-64909386 None:intergenic 30.0%
! ATACAATTTTGTAAACGGGT+TGG - chr4_2:64909395-64909414 None:intergenic 30.0%
ACCCGTTTACAAAATTGTAT+TGG + chr4_2:64909395-64909414 Msa0615420:intron 30.0%
AATAGTAATCTTCATATGGC+AGG + chr4_2:64909628-64909647 Msa0615420:intron 30.0%
TATTACATTTGGATGGAAGT+AGG - chr4_2:64909752-64909771 None:intergenic 30.0%
TGAGAAATGGATGGAAAAAT+TGG + chr4_2:64909857-64909876 Msa0615420:CDS 30.0%
GTATGAATACATATACAAGC+TGG + chr4_2:64910105-64910124 Msa0615420:CDS 30.0%
! TCTTAATTTCTCCCGTTTTA+TGG + chr4_2:64910504-64910523 Msa0615420:intron 30.0%
ACATTTCACAGTTTCACATT+TGG + chr4_2:64910564-64910583 Msa0615420:CDS 30.0%
TCTGTGAGATAACATTAAGA+GGG + chr4_2:64910716-64910735 Msa0615420:intron 30.0%
! CAATCTAAAGTAAGTAAGGT+AGG - chr4_2:64910845-64910864 None:intergenic 30.0%
TATTTGATCTGTATGCAAAG+AGG - chr4_2:64911183-64911202 None:intergenic 30.0%
TACAGATCAAATATGCCAAA+TGG + chr4_2:64911190-64911209 Msa0615420:intron 30.0%
ATAAAAGAAAGAAGCCACTT+GGG - chr4_2:64911220-64911239 None:intergenic 30.0%
TATTCTTTAACTAGTGTGCT+TGG + chr4_2:64911451-64911470 Msa0615420:intron 30.0%
ATTCTTTAACTAGTGTGCTT+GGG + chr4_2:64911452-64911471 Msa0615420:intron 30.0%
! ACAAAAAGTGCAACTTAATC+AGG - chr4_2:64911530-64911549 None:intergenic 30.0%
! AAGGGTTTGTGGAAAATTTT+AGG + chr4_2:64911762-64911781 Msa0615420:intron 30.0%
! AGGGTTTGTGGAAAATTTTA+GGG + chr4_2:64911763-64911782 Msa0615420:intron 30.0%
!! TTTGTGGAAAATTTTAGGGA+AGG + chr4_2:64911767-64911786 Msa0615420:intron 30.0%
! CTCTATGTAAACTCTTTTTG+GGG - chr4_2:64911846-64911865 None:intergenic 30.0%
! CTCTCTATGTAAACTCTTTT+TGG - chr4_2:64911848-64911867 None:intergenic 30.0%
AATAAGAATACATGGGAATG+TGG + chr4_2:64911912-64911931 Msa0615420:three_prime_UTR 30.0%
ATAAGAATACATGGGAATGT+GGG + chr4_2:64911913-64911932 Msa0615420:three_prime_UTR 30.0%
!!! AATGTGGGATCTCATTTTTT+TGG + chr4_2:64911928-64911947 Msa0615420:three_prime_UTR 30.0%
ATACTACTTCCAACAACTAT+AGG - chr4_2:64911963-64911982 None:intergenic 30.0%
ACTGCATCAGGTATAAATAT+TGG + chr4_2:64911991-64912010 Msa0615420:three_prime_UTR 30.0%
! AATTGGTCTAAATTCCTTTG+GGG - chr4_2:64912059-64912078 None:intergenic 30.0%
CAAATGAAGCTACAGAAAAT+TGG - chr4_2:64912076-64912095 None:intergenic 30.0%
!! GTGTTACAAATTTGTTGTCT+TGG + chr4_2:64912129-64912148 Msa0615420:three_prime_UTR 30.0%
TACAGAAATTGAACACAAAC+GGG - chr4_2:64912183-64912202 None:intergenic 30.0%
!! TTGACTTGTTACATATGTGA+AGG + chr4_2:64912211-64912230 Msa0615420:three_prime_UTR 30.0%
TGTCATACCCTTGTAAAAAT+AGG + chr4_2:64912282-64912301 Msa0615420:three_prime_UTR 30.0%
!!! GAAACAGACCTATTTTTACA+AGG - chr4_2:64912293-64912312 None:intergenic 30.0%
AGAGCCAGAATATAAACATT+TGG - chr4_2:64912438-64912457 None:intergenic 30.0%
GAGTTGACAAAAGTTTACTT+GGG - chr4_2:64912503-64912522 None:intergenic 30.0%
AGAGTTGACAAAAGTTTACT+TGG - chr4_2:64912504-64912523 None:intergenic 30.0%
AGAATAGAGAAAATGTCGGA+GGG - chr4_2:64904747-64904766 None:intergenic 35.0%
AAGAATAGAGAAAATGTCGG+AGG - chr4_2:64904748-64904767 None:intergenic 35.0%
CTCTTTCAGATCTCTTTCTA+GGG + chr4_2:64904786-64904805 Msa0615420:CDS 35.0%
TACGAAGAAATGGAAGAAGT+AGG - chr4_2:64904874-64904893 None:intergenic 35.0%
TGAATGGTGATTGATGTTGT+TGG + chr4_2:64905091-64905110 Msa0615420:intron 35.0%
TTACACTTTAGTAGGAGAAG+AGG - chr4_2:64905546-64905565 None:intergenic 35.0%
!!! CACCTTTTTTCTCTTCTGTT+TGG + chr4_2:64905628-64905647 Msa0615420:intron 35.0%
AGCCAAACAGAAGAGAAAAA+AGG - chr4_2:64905633-64905652 None:intergenic 35.0%
TTGGATTGATGAAGTTGAAG+AGG + chr4_2:64905667-64905686 Msa0615420:intron 35.0%
TGGATTGATGAAGTTGAAGA+GGG + chr4_2:64905668-64905687 Msa0615420:intron 35.0%
!!! AGCTTTGAACTTTTGGACTT+CGG + chr4_2:64906037-64906056 Msa0615420:intron 35.0%
!! TTTTGATTGCAGGATAGTAG+TGG - chr4_2:64906137-64906156 None:intergenic 35.0%
!!! ATGATTGCAGTTTTGATTGC+AGG - chr4_2:64906147-64906166 None:intergenic 35.0%
TTTGGTATCAGAAGGTTTCA+TGG + chr4_2:64906174-64906193 Msa0615420:intron 35.0%
AATCTGAACAATTCTCCTGA+TGG + chr4_2:64906411-64906430 Msa0615420:intron 35.0%
! TTTGTTTAGGTTCTTGACCA+TGG + chr4_2:64906662-64906681 Msa0615420:intron 35.0%
TAGCAAGAAAGAATCATCCA+TGG - chr4_2:64906682-64906701 None:intergenic 35.0%
TGTAGAATCTCCAAGTAAGT+CGG - chr4_2:64906862-64906881 None:intergenic 35.0%
CTTACTTGGAGATTCTACAA+AGG + chr4_2:64906863-64906882 Msa0615420:CDS 35.0%
! CCACCTTGACTAATTTTTAC+CGG + chr4_2:64907171-64907190 Msa0615420:intron 35.0%
CAAACTAAAACACTGTGAAC+TGG - chr4_2:64907213-64907232 None:intergenic 35.0%
CTTCTTGTTAAACCAAGGTT+TGG + chr4_2:64907417-64907436 Msa0615420:intron 35.0%
! TTGATTTTGCTACCAAACCT+TGG - chr4_2:64907432-64907451 None:intergenic 35.0%
GTCCTATGTAAAAGCAAGTT+TGG + chr4_2:64907501-64907520 Msa0615420:intron 35.0%
!! TCCCAAACTTGCTTTTACAT+AGG - chr4_2:64907506-64907525 None:intergenic 35.0%
GTATACGGCTAATTGCATAA+TGG - chr4_2:64907544-64907563 None:intergenic 35.0%
CAAAAAAAGGAAGGAAAAGC+AGG - chr4_2:64907942-64907961 None:intergenic 35.0%
CTATAAGCAGAAGAATGAAG+AGG - chr4_2:64907995-64908014 None:intergenic 35.0%
! CTTCTGTTTGATGTCGATTA+AGG - chr4_2:64908085-64908104 None:intergenic 35.0%
ATCGACATCAAACAGAAGAA+TGG + chr4_2:64908087-64908106 Msa0615420:CDS 35.0%
CATCAAACAGAAGAATGGAA+AGG + chr4_2:64908092-64908111 Msa0615420:CDS 35.0%
AAACAGAAGAATGGAAAGGA+TGG + chr4_2:64908096-64908115 Msa0615420:CDS 35.0%
!! TGAACTGACATTGTTTTACC+TGG + chr4_2:64908249-64908268 Msa0615420:intron 35.0%
! CTCAGATGATTTTTCACATC+AGG - chr4_2:64908285-64908304 None:intergenic 35.0%
TTTATTTCATAGCTGTTGCC+AGG + chr4_2:64908356-64908375 Msa0615420:intron 35.0%
CTGTTGCCAGGAAAATATTA+TGG + chr4_2:64908368-64908387 Msa0615420:intron 35.0%
AAACTAAAGTTGACGTAGCT+TGG + chr4_2:64908467-64908486 Msa0615420:intron 35.0%
!!! AACATGGTTTTGAATCTGTC+AGG + chr4_2:64908552-64908571 Msa0615420:intron 35.0%
GCAAAAAGAGTAGCAAGTTA+AGG - chr4_2:64908845-64908864 None:intergenic 35.0%
! AAAGTAAAAAGCGTGTGCAT+TGG - chr4_2:64908983-64909002 None:intergenic 35.0%
AAAGCATGCCAGAAACTTTA+CGG - chr4_2:64909065-64909084 None:intergenic 35.0%
TTCTTGTGGTGATCTTGATT+TGG + chr4_2:64909083-64909102 Msa0615420:intron 35.0%
TCTTGTGGTGATCTTGATTT+GGG + chr4_2:64909084-64909103 Msa0615420:intron 35.0%
! AGCCCATTTGCATTCTTTTT+GGG + chr4_2:64909136-64909155 Msa0615420:intron 35.0%
ATCAGTTGAATGAAACGAAC+TGG - chr4_2:64909249-64909268 None:intergenic 35.0%
GTAGATTATGGGAAAGAAAC+TGG - chr4_2:64909285-64909304 None:intergenic 35.0%
TATTGTAAACAACAGAAGGG+GGG - chr4_2:64909365-64909384 None:intergenic 35.0%
CTATTGTAAACAACAGAAGG+GGG - chr4_2:64909366-64909385 None:intergenic 35.0%
!! TACCATTTCAGGTTGAGAAA+TGG + chr4_2:64909844-64909863 Msa0615420:intron 35.0%
ATCCATTTCTCAACCTGAAA+TGG - chr4_2:64909849-64909868 None:intergenic 35.0%
!! ATTTCAGGTTGAGAAATGGA+TGG + chr4_2:64909848-64909867 Msa0615420:intron 35.0%
!! ACGTTCTTGCTTAGTCTTTT+TGG - chr4_2:64910048-64910067 None:intergenic 35.0%
ATACATATACAAGCTGGACA+AGG + chr4_2:64910111-64910130 Msa0615420:CDS 35.0%
TATCTTTCAAGCAGAAACGA+AGG - chr4_2:64910241-64910260 None:intergenic 35.0%
AGAAAATCAATAGATGGAGC+TGG - chr4_2:64910298-64910317 None:intergenic 35.0%
TCAGCGTTTATATTTGCTTG+AGG + chr4_2:64910339-64910358 Msa0615420:intron 35.0%
AAAGAAAACGTACGCAAAGA+GGG - chr4_2:64910399-64910418 None:intergenic 35.0%
TAAAGAAAACGTACGCAAAG+AGG - chr4_2:64910400-64910419 None:intergenic 35.0%
CACCTGATAATCCATAAAAC+GGG - chr4_2:64910518-64910537 None:intergenic 35.0%
CCACCTGATAATCCATAAAA+CGG - chr4_2:64910519-64910538 None:intergenic 35.0%
ATATTCTTTCACCATCCTCT+CGG + chr4_2:64910615-64910634 Msa0615420:intron 35.0%
ATAAATTAATTGAGGCCGAG+AGG - chr4_2:64910633-64910652 None:intergenic 35.0%
TATAAATATGGGAGTGAGTG+TGG + chr4_2:64910650-64910669 Msa0615420:intron 35.0%
AGTGTGGTTTCTGTTTCATT+TGG + chr4_2:64910666-64910685 Msa0615420:intron 35.0%
ATAAAATGCAGGGAATGACT+GGG - chr4_2:64910695-64910714 None:intergenic 35.0%
TCTCACAGACATAAAATGCA+GGG - chr4_2:64910705-64910724 None:intergenic 35.0%
ATCTCACAGACATAAAATGC+AGG - chr4_2:64910706-64910725 None:intergenic 35.0%
GTCTGTGAGATAACATTAAG+AGG + chr4_2:64910715-64910734 Msa0615420:intron 35.0%
GCTATGTGATGCAAATATAC+AGG + chr4_2:64910738-64910757 Msa0615420:intron 35.0%
GCGCTATTATCTATTGATCT+GGG - chr4_2:64910904-64910923 None:intergenic 35.0%
TGCGCTATTATCTATTGATC+TGG - chr4_2:64910905-64910924 None:intergenic 35.0%
ATCTCAATAGTTGCTGAAGT+GGG + chr4_2:64910957-64910976 Msa0615420:intron 35.0%
ACATCTTCGCAATAAAAAGG+TGG - chr4_2:64911040-64911059 None:intergenic 35.0%
GATAAAAGAAAGAAGCCACT+TGG - chr4_2:64911221-64911240 None:intergenic 35.0%
ATTACTTAACTGGTGCTCTT+AGG - chr4_2:64911343-64911362 None:intergenic 35.0%
TTCTTTAACTAGTGTGCTTG+GGG + chr4_2:64911453-64911472 Msa0615420:intron 35.0%
TTGTACCCACAAAAGACAAT+CGG + chr4_2:64911627-64911646 Msa0615420:CDS 35.0%
TTCAATTTGGATTGACTGTG+CGG + chr4_2:64911868-64911887 Msa0615420:three_prime_UTR 35.0%
AGCAATGTTCCTATAGTTGT+TGG + chr4_2:64911951-64911970 Msa0615420:three_prime_UTR 35.0%
TTATACCTGATGCAGTGAAT+GGG - chr4_2:64911987-64912006 None:intergenic 35.0%
TTTATACCTGATGCAGTGAA+TGG - chr4_2:64911988-64912007 None:intergenic 35.0%
TCAGGTATAAATATTGGCGT+TGG + chr4_2:64911997-64912016 Msa0615420:three_prime_UTR 35.0%
ACGTATAAGGAGGAAAAAGT+AGG + chr4_2:64912103-64912122 Msa0615420:three_prime_UTR 35.0%
AATGGTAACACAAGCAATCA+TGG - chr4_2:64912354-64912373 None:intergenic 35.0%
!! AGTATTGGCTCGCAATTAAA+TGG - chr4_2:64912372-64912391 None:intergenic 35.0%
ATTTAATTGCGAGCCAATAC+TGG + chr4_2:64912371-64912390 Msa0615420:three_prime_UTR 35.0%
TTGTGAACTATCGTTACACT+TGG + chr4_2:64912407-64912426 Msa0615420:three_prime_UTR 35.0%
GAATAGAGAAAATGTCGGAG+GGG - chr4_2:64904746-64904765 None:intergenic 40.0%
GAAAGAGATCTGAAAGAGGA+AGG - chr4_2:64904784-64904803 None:intergenic 40.0%
CCTAGAAAGAGATCTGAAAG+AGG - chr4_2:64904788-64904807 None:intergenic 40.0%
CCTCTTTCAGATCTCTTTCT+AGG + chr4_2:64904785-64904804 Msa0615420:CDS 40.0%
CGCGTGGAGTATAAGAAAAT+TGG + chr4_2:64905344-64905363 Msa0615420:intron 40.0%
ATTCAGGTGTCTTTCTTGCT+GGG + chr4_2:64905464-64905483 Msa0615420:intron 40.0%
!! TGGCTGTTTCTTCTTGTGAT+TGG + chr4_2:64905648-64905667 Msa0615420:intron 40.0%
GGATACTATGTTTCCCATCT+TGG + chr4_2:64906222-64906241 Msa0615420:intron 40.0%
! TAATCTTGATGAGTTGGGGA+AGG + chr4_2:64906453-64906472 Msa0615420:CDS 40.0%
GTTGGGGAAGGATACAATTA+AGG + chr4_2:64906465-64906484 Msa0615420:CDS 40.0%
TAGAAAATCGGGCAACTTTG+AGG + chr4_2:64906700-64906719 Msa0615420:CDS 40.0%
AGAAAATCGGGCAACTTTGA+GGG + chr4_2:64906701-64906720 Msa0615420:CDS 40.0%
! ATTTTCTACAGGGCTGAGTT+TGG + chr4_2:64906801-64906820 Msa0615420:intron 40.0%
CAGATCGAAGCAAAAACAAG+TGG - chr4_2:64906914-64906933 None:intergenic 40.0%
!!! CACTTGTTTTTGCTTCGATC+TGG + chr4_2:64906912-64906931 Msa0615420:intron 40.0%
CCGGTAAAAATTAGTCAAGG+TGG - chr4_2:64907174-64907193 None:intergenic 40.0%
CCACCGGTAAAAATTAGTCA+AGG - chr4_2:64907177-64907196 None:intergenic 40.0%
! CCTTGACTAATTTTTACCGG+TGG + chr4_2:64907174-64907193 Msa0615420:intron 40.0%
TGGGCTATTGTAAAATCCAC+CGG - chr4_2:64907193-64907212 None:intergenic 40.0%
!! CTTAGCTTTGTTCACACTTG+TGG + chr4_2:64907702-64907721 Msa0615420:intron 40.0%
! AGTTTTCGGATCAGCCAAAA+AGG - chr4_2:64908137-64908156 None:intergenic 40.0%
!! TGTTATTGTTCGGTGTGTTC+AGG + chr4_2:64908595-64908614 Msa0615420:intron 40.0%
! TTTTCATTGCCGCGTATGTT+TGG + chr4_2:64908675-64908694 Msa0615420:CDS 40.0%
TATGTTTGGATGACTGGGTT+TGG + chr4_2:64908689-64908708 Msa0615420:CDS 40.0%
AGCAAGTTAAGGATAGACAG+TGG - chr4_2:64908834-64908853 None:intergenic 40.0%
! GCAAGGCACTTTAATGAGTT+AGG - chr4_2:64908880-64908899 None:intergenic 40.0%
!! GCACACGCTTTTTACTTTGA+TGG + chr4_2:64908985-64909004 Msa0615420:CDS 40.0%
!! TTTGATGGTGTATGGAGCAT+TGG + chr4_2:64909000-64909019 Msa0615420:CDS 40.0%
!! TTGATGGTGTATGGAGCATT+GGG + chr4_2:64909001-64909020 Msa0615420:CDS 40.0%
CAATGAAATTGCCTCAGTGA+TGG + chr4_2:64909039-64909058 Msa0615420:intron 40.0%
!! ATCTTGATTTGGGAAATCCC+AGG + chr4_2:64909094-64909113 Msa0615420:intron 40.0%
! GAGCCCATTTGCATTCTTTT+TGG + chr4_2:64909135-64909154 Msa0615420:intron 40.0%
AAATCTCAGGTATGACGTGT+TGG - chr4_2:64909226-64909245 None:intergenic 40.0%
TGAAACGAACTGGAAATCTC+AGG - chr4_2:64909239-64909258 None:intergenic 40.0%
TGCACAACTTGAGTCTTGAA+AGG - chr4_2:64909339-64909358 None:intergenic 40.0%
! TTTCAAGACTCAAGTTGTGC+AGG + chr4_2:64909338-64909357 Msa0615420:intron 40.0%
ATTGTAAACAACAGAAGGGG+GGG - chr4_2:64909364-64909383 None:intergenic 40.0%
ATGAGTGGCATTTCAGATCT+GGG + chr4_2:64909689-64909708 Msa0615420:CDS 40.0%
GATCGCTACATTTGGATAGT+TGG + chr4_2:64909715-64909734 Msa0615420:CDS 40.0%
TAAAGCAACTGACACAATGC+CGG - chr4_2:64909919-64909938 None:intergenic 40.0%
! CTTTCTAGGTTGGGTATATG+TGG + chr4_2:64910083-64910102 Msa0615420:intron 40.0%
TTGGAATCCACGAGGTATAT+GGG - chr4_2:64910156-64910175 None:intergenic 40.0%
ATTGGAATCCACGAGGTATA+TGG - chr4_2:64910157-64910176 None:intergenic 40.0%
GGAATTTCACTCAGCACTTA+CGG + chr4_2:64910360-64910379 Msa0615420:CDS 40.0%
TACTGAAATTCCATGTTGGG+TGG + chr4_2:64910427-64910446 Msa0615420:intron 40.0%
!! CTCCCGTTTTATGGATTATC+AGG + chr4_2:64910513-64910532 Msa0615420:intron 40.0%
!! CCGTTTTATGGATTATCAGG+TGG + chr4_2:64910516-64910535 Msa0615420:intron 40.0%
! TTATGGATTATCAGGTGGCT+TGG + chr4_2:64910521-64910540 Msa0615420:intron 40.0%
CACAGTTTCACATTTGGTTG+AGG + chr4_2:64910570-64910589 Msa0615420:CDS 40.0%
CATAAAATGCAGGGAATGAC+TGG - chr4_2:64910696-64910715 None:intergenic 40.0%
GATCTCAATAGTTGCTGAAG+TGG + chr4_2:64910956-64910975 Msa0615420:intron 40.0%
TAAGCATGAAGTTGAGCATG+GGG - chr4_2:64911252-64911271 None:intergenic 40.0%
GTAAGCATGAAGTTGAGCAT+GGG - chr4_2:64911253-64911272 None:intergenic 40.0%
AGTAAGCATGAAGTTGAGCA+TGG - chr4_2:64911254-64911273 None:intergenic 40.0%
TACTACCGCTATATACGTCT+TGG + chr4_2:64911270-64911289 Msa0615420:intron 40.0%
CCATACCAAGACGTATATAG+CGG - chr4_2:64911278-64911297 None:intergenic 40.0%
TATACCTGATGCAGTGAATG+GGG - chr4_2:64911986-64912005 None:intergenic 40.0%
!! ATATTGGCGTTGGTTTGTGT+TGG + chr4_2:64912007-64912026 Msa0615420:three_prime_UTR 40.0%
CGAACCACATATTCCAGTAT+TGG - chr4_2:64912387-64912406 None:intergenic 40.0%
TAAATTTCTTGGCGGCAAAC+TGG + chr4_2:64912464-64912483 Msa0615420:three_prime_UTR 40.0%
CTCTCTCTCAGTGGTTGAAT+TGG - chr4_2:64904719-64904738 None:intergenic 45.0%
CTAGATTGGAGGATTGGAGA+TGG + chr4_2:64904976-64904995 Msa0615420:intron 45.0%
! GGATTGGAGATGGTTGTTTC+CGG + chr4_2:64904986-64905005 Msa0615420:CDS 45.0%
GAGTAAAAACACACCTGTCC+CGG - chr4_2:64905022-64905041 None:intergenic 45.0%
! CAAGTTTCAGCATTTTCGCG+TGG + chr4_2:64905328-64905347 Msa0615420:intron 45.0%
CATTCAGGTGTCTTTCTTGC+TGG + chr4_2:64905463-64905482 Msa0615420:intron 45.0%
GATCTTGTGCTTCCACTTCA+TGG + chr4_2:64905731-64905750 Msa0615420:intron 45.0%
GTTTAGATATGCTGCTGCAC+AGG + chr4_2:64907784-64907803 Msa0615420:intron 45.0%
AGAATGGAAAGGATGGATGC+AGG + chr4_2:64908103-64908122 Msa0615420:CDS 45.0%
TATATCACCTGAGCAAAGCG+TGG - chr4_2:64908755-64908774 None:intergenic 45.0%
! AAAGTGCCTTGCAGATGATG+TGG + chr4_2:64908888-64908907 Msa0615420:intron 45.0%
GTTGAGAACGATACAGCAGA+AGG - chr4_2:64908933-64908952 None:intergenic 45.0%
AAACTTTACGGCCATCACTG+AGG - chr4_2:64909053-64909072 None:intergenic 45.0%
AGTGATGGCCGTAAAGTTTC+TGG + chr4_2:64909054-64909073 Msa0615420:intron 45.0%
!! GTTTCTGGCATGCTTTCTTG+TGG + chr4_2:64909069-64909088 Msa0615420:intron 45.0%
! TCAGGTATGACGTGTTGGTA+AGG - chr4_2:64909221-64909240 None:intergenic 45.0%
CATGAGTGGCATTTCAGATC+TGG + chr4_2:64909688-64909707 Msa0615420:CDS 45.0%
!! GTTGATAACACCCACGTGAT+TGG - chr4_2:64910175-64910194 None:intergenic 45.0%
!!! TCCATGTTGGGTGGTTTTGA+TGG + chr4_2:64910436-64910455 Msa0615420:intron 45.0%
TCCATCAAAACCACCCAACA+TGG - chr4_2:64910440-64910459 None:intergenic 45.0%
! GTGGCTTGGCAAGATTACTT+TGG + chr4_2:64910535-64910554 Msa0615420:CDS 45.0%
ATTAATTGAGGCCGAGAGGA+TGG - chr4_2:64910629-64910648 None:intergenic 45.0%
GAGCATGTATCTCAACTGAC+TGG - chr4_2:64910789-64910808 None:intergenic 45.0%
GATCTGGGTCATCATCACTA+GGG - chr4_2:64910889-64910908 None:intergenic 45.0%
TGATCTGGGTCATCATCACT+AGG - chr4_2:64910890-64910909 None:intergenic 45.0%
CCGCTATATACGTCTTGGTA+TGG + chr4_2:64911275-64911294 Msa0615420:intron 45.0%
GGGTACAAACACTGTCTTGA+GGG - chr4_2:64911615-64911634 None:intergenic 45.0%
TGGGTACAAACACTGTCTTG+AGG - chr4_2:64911616-64911635 None:intergenic 45.0%
TACCCACAAAAGACAATCGG+CGG + chr4_2:64911630-64911649 Msa0615420:CDS 45.0%
TTACCGTTGAATGAGGGATC+TGG - chr4_2:64911724-64911743 None:intergenic 45.0%
AGAGGCTTACCGTTGAATGA+GGG - chr4_2:64911730-64911749 None:intergenic 45.0%
TAGAGGCTTACCGTTGAATG+AGG - chr4_2:64911731-64911750 None:intergenic 45.0%
! AGCCTCTATTTGCTGCATGA+AGG + chr4_2:64911743-64911762 Msa0615420:intron 45.0%
! GCCTCTATTTGCTGCATGAA+GGG + chr4_2:64911744-64911763 Msa0615420:intron 45.0%
ACCCTTCATGCAGCAAATAG+AGG - chr4_2:64911748-64911767 None:intergenic 45.0%
TTTGCTGCATGAAGGGTTTG+TGG + chr4_2:64911751-64911770 Msa0615420:intron 45.0%
TTTGGATTGACTGTGCGGAA+AGG + chr4_2:64911873-64911892 Msa0615420:three_prime_UTR 45.0%
TTGGAGGTTGGCATATGAAG+AGG + chr4_2:64912026-64912045 Msa0615420:three_prime_UTR 45.0%
TGGAGGTTGGCATATGAAGA+GGG + chr4_2:64912027-64912046 Msa0615420:three_prime_UTR 45.0%
CATTTGTGCGCACACGTATA+AGG + chr4_2:64912090-64912109 Msa0615420:three_prime_UTR 45.0%
CGAGCCAATACTGGAATATG+TGG + chr4_2:64912380-64912399 Msa0615420:three_prime_UTR 45.0%
!!! ATTATTATTTTTCAAAATAA+AGG - chr4_2:64905926-64905945 None:intergenic 5.0%
!!! TTATTTTGAAAAATAATAAT+AGG + chr4_2:64905926-64905945 Msa0615420:intron 5.0%
TGTTTCCGGACCAATAACGC+CGG + chr4_2:64905000-64905019 Msa0615420:CDS 50.0%
ACTTCGGATACCAACCAGTC+AGG + chr4_2:64906053-64906072 Msa0615420:intron 50.0%
CTTCGGATACCAACCAGTCA+GGG + chr4_2:64906054-64906073 Msa0615420:intron 50.0%
TTTACTCCACTGACCCTGAC+TGG - chr4_2:64906070-64906089 None:intergenic 50.0%
CTGAATGACTGCAGTCCATC+AGG - chr4_2:64906429-64906448 None:intergenic 50.0%
!! AGATGATCGGGCCATTTTGC+TGG + chr4_2:64906489-64906508 Msa0615420:CDS 50.0%
AAGCCCTGCTTCCAGCAAAA+TGG - chr4_2:64906503-64906522 None:intergenic 50.0%
! TGCGATCGAACCGACTTACT+TGG + chr4_2:64906849-64906868 Msa0615420:CDS 50.0%
ATTCTGCGACAAGCTTCGCT+TGG + chr4_2:64907630-64907649 Msa0615420:intron 50.0%
TTCTGCGACAAGCTTCGCTT+GGG + chr4_2:64907631-64907650 Msa0615420:intron 50.0%
ATGGAAAGGATGGATGCAGG+TGG + chr4_2:64908106-64908125 Msa0615420:intron 50.0%
TGGAAAGGATGGATGCAGGT+GGG + chr4_2:64908107-64908126 Msa0615420:intron 50.0%
ACATCAGGCATGTTGTAGCC+AGG - chr4_2:64908270-64908289 None:intergenic 50.0%
!! GACGTAGCTTGGTGTAGTCT+TGG + chr4_2:64908478-64908497 Msa0615420:intron 50.0%
CCCAGTCATCCAAACATACG+CGG - chr4_2:64908687-64908706 None:intergenic 50.0%
CCGCGTATGTTTGGATGACT+GGG + chr4_2:64908684-64908703 Msa0615420:CDS 50.0%
!!! GTGGCGGCTTAACTTTTTCG+TGG + chr4_2:64908907-64908926 Msa0615420:CDS 50.0%
!! ATGGGAAAGAAACTGGCTCG+AGG - chr4_2:64909278-64909297 None:intergenic 50.0%
CTGGGCTTGATCGCTACATT+TGG + chr4_2:64909707-64909726 Msa0615420:CDS 50.0%
AACTCCACCCATATACCTCG+TGG + chr4_2:64910146-64910165 Msa0615420:intron 50.0%
GAATCCACGAGGTATATGGG+TGG - chr4_2:64910153-64910172 None:intergenic 50.0%
CTCGTGGATTCCAATCACGT+GGG + chr4_2:64910162-64910181 Msa0615420:intron 50.0%
ATAGTTGCTGAAGTGGGTCG+TGG + chr4_2:64910963-64910982 Msa0615420:intron 50.0%
! AGTTGAGCATGGGGTACTCT+GGG - chr4_2:64911243-64911262 None:intergenic 50.0%
! AAGTTGAGCATGGGGTACTC+TGG - chr4_2:64911244-64911263 None:intergenic 50.0%
!! AGCCGCCGATTGTCTTTTGT+GGG - chr4_2:64911635-64911654 None:intergenic 50.0%
!! AAGCCGCCGATTGTCTTTTG+TGG - chr4_2:64911636-64911655 None:intergenic 50.0%
GCTCCAGATCCCTCATTCAA+CGG + chr4_2:64911718-64911737 Msa0615420:CDS 50.0%
GTATCCCCATTCACTGCATC+AGG + chr4_2:64911979-64911998 Msa0615420:three_prime_UTR 50.0%
!! TTGGCGTTGGTTTGTGTTGG+AGG + chr4_2:64912010-64912029 Msa0615420:three_prime_UTR 50.0%
!! CGTTGGTTTGTGTTGGAGGT+TGG + chr4_2:64912014-64912033 Msa0615420:three_prime_UTR 50.0%
GGAGGTTGGCATATGAAGAG+GGG + chr4_2:64912028-64912047 Msa0615420:three_prime_UTR 50.0%
GAAGAGGGGATTAACCCCAA+AGG + chr4_2:64912042-64912061 Msa0615420:three_prime_UTR 50.0%
TTGTGCGCACACGTATAAGG+AGG + chr4_2:64912093-64912112 Msa0615420:three_prime_UTR 50.0%
AGGGGATGTCTCTCTCTCAG+TGG - chr4_2:64904728-64904747 None:intergenic 55.0%
GTTTCCGGACCAATAACGCC+GGG + chr4_2:64905001-64905020 Msa0615420:CDS 55.0%
TACCAACCAGTCAGGGTCAG+TGG + chr4_2:64906061-64906080 Msa0615420:intron 55.0%
!! GGGCCATTTTGCTGGAAGCA+GGG + chr4_2:64906497-64906516 Msa0615420:CDS 55.0%
! TGCAGGTGGGTGCTCCTTTT+TGG + chr4_2:64908120-64908139 Msa0615420:intron 55.0%
GCCGCGTATGTTTGGATGAC+TGG + chr4_2:64908683-64908702 Msa0615420:CDS 55.0%
TAGCCTTCCACGCTTTGCTC+AGG + chr4_2:64908745-64908764 Msa0615420:CDS 55.0%
TCACCTGAGCAAAGCGTGGA+AGG - chr4_2:64908751-64908770 None:intergenic 55.0%
GTGCCTTGCAGATGATGTGG+CGG + chr4_2:64908891-64908910 Msa0615420:intron 55.0%
AAGCCGCCACATCATCTGCA+AGG - chr4_2:64908897-64908916 None:intergenic 55.0%
CCACGTGATTGGAATCCACG+AGG - chr4_2:64910164-64910183 None:intergenic 55.0%
CCTCGTGGATTCCAATCACG+TGG + chr4_2:64910161-64910180 Msa0615420:intron 55.0%
TGCCAAATGGACAGCCCAAG+TGG + chr4_2:64911203-64911222 Msa0615420:intron 55.0%
AGCCACTTGGGCTGTCCATT+TGG - chr4_2:64911208-64911227 None:intergenic 55.0%
GACTGTGCGGAAAGGAAGCT+AGG + chr4_2:64911881-64911900 Msa0615420:three_prime_UTR 55.0%
TGTGCGGAAAGGAAGCTAGG+TGG + chr4_2:64911884-64911903 Msa0615420:three_prime_UTR 55.0%
CTGTCCCGGCGTTATTGGTC+CGG - chr4_2:64905008-64905027 None:intergenic 60.0%
CACACCTGTCCCGGCGTTAT+TGG - chr4_2:64905013-64905032 None:intergenic 60.0%
CTCCACTGACCCTGACTGGT+TGG - chr4_2:64906066-64906085 None:intergenic 60.0%
!! CGGGCCATTTTGCTGGAAGC+AGG + chr4_2:64906496-64906515 Msa0615420:CDS 60.0%
CGGACCAATAACGCCGGGAC+AGG + chr4_2:64905006-64905025 Msa0615420:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 64904682 64912554 64904682 ID=Msa0615420;Name=Msa0615420
chr4_2 mRNA 64904682 64912554 64904682 ID=Msa0615420-mRNA-1;Parent=Msa0615420;Name=Msa0615420-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.62|0.64|1|0.75|0.76|17|718|499
chr4_2 exon 64904682 64904687 64904682 ID=Msa0615420-mRNA-1:exon:18269;Parent=Msa0615420-mRNA-1
chr4_2 exon 64904772 64904897 64904772 ID=Msa0615420-mRNA-1:exon:18270;Parent=Msa0615420-mRNA-1
chr4_2 exon 64904980 64905027 64904980 ID=Msa0615420-mRNA-1:exon:18271;Parent=Msa0615420-mRNA-1
chr4_2 exon 64905470 64905561 64905470 ID=Msa0615420-mRNA-1:exon:18272;Parent=Msa0615420-mRNA-1
chr4_2 exon 64906441 64906578 64906441 ID=Msa0615420-mRNA-1:exon:18273;Parent=Msa0615420-mRNA-1
chr4_2 exon 64906671 64906727 64906671 ID=Msa0615420-mRNA-1:exon:18274;Parent=Msa0615420-mRNA-1
chr4_2 exon 64906812 64906884 64906812 ID=Msa0615420-mRNA-1:exon:18275;Parent=Msa0615420-mRNA-1
chr4_2 exon 64907966 64908124 64907966 ID=Msa0615420-mRNA-1:exon:18276;Parent=Msa0615420-mRNA-1
chr4_2 exon 64908617 64908766 64908617 ID=Msa0615420-mRNA-1:exon:18277;Parent=Msa0615420-mRNA-1
chr4_2 exon 64908902 64909022 64908902 ID=Msa0615420-mRNA-1:exon:18278;Parent=Msa0615420-mRNA-1
chr4_2 exon 64909650 64909765 64909650 ID=Msa0615420-mRNA-1:exon:18279;Parent=Msa0615420-mRNA-1
chr4_2 exon 64909855 64909941 64909855 ID=Msa0615420-mRNA-1:exon:18280;Parent=Msa0615420-mRNA-1
chr4_2 exon 64910091 64910132 64910091 ID=Msa0615420-mRNA-1:exon:18281;Parent=Msa0615420-mRNA-1
chr4_2 exon 64910343 64910405 64910343 ID=Msa0615420-mRNA-1:exon:18282;Parent=Msa0615420-mRNA-1
chr4_2 exon 64910535 64910591 64910535 ID=Msa0615420-mRNA-1:exon:18283;Parent=Msa0615420-mRNA-1
chr4_2 exon 64911581 64911739 64911581 ID=Msa0615420-mRNA-1:exon:18284;Parent=Msa0615420-mRNA-1
chr4_2 exon 64911831 64912554 64911831 ID=Msa0615420-mRNA-1:exon:18285;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64904682 64904687 64904682 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64904772 64904897 64904772 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64904980 64905027 64904980 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64905470 64905561 64905470 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64906441 64906578 64906441 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64906671 64906727 64906671 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64906812 64906884 64906812 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64907966 64908124 64907966 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64908617 64908766 64908617 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64908902 64909022 64908902 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64909650 64909765 64909650 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64909855 64909941 64909855 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64910091 64910132 64910091 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64910343 64910405 64910343 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64910535 64910591 64910535 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64911581 64911739 64911581 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 CDS 64911831 64911836 64911831 ID=Msa0615420-mRNA-1:cds;Parent=Msa0615420-mRNA-1
chr4_2 three_prime_UTR 64911837 64912554 64911837 ID=Msa0615420-mRNA-1:three_prime_utr;Parent=Msa0615420-mRNA-1
Gene Sequence

>Msa0615420

ATGTTACAAACTCTTCCTTCCTCTTTCAGATCTCTTTCTAGGGTTTCTCTCTTTCTCTGCTATCTATTTATCATCACTCTTTCACACGCTTTCTTCACAAATTCTCCTACTTCTTCCATTTCTTCGTATTTGATTGGAGGATTGGAGATGGTTGTTTCCGGACCAATAACGCCGGGACAGGTGTCTTTCTTGCTGGGAGTTATTCCAGTTTTTGTTACATGGATATATTCAGAATACTTAGAGTACAAAAGAACCTCTTCTCCTACTAAAGTTCATTCAGATATTAATCTTGATGAGTTGGGGAAGGATACAATTAAGGAAGATGATCGGGCCATTTTGCTGGAAGCAGGGCTTACAAGATCAGCATCAGCAAAATTACATGCATCATCTGTCAAATTAAATTTGATTCGGTTCTTGACCATGGATGATTCTTTCTTGCTAGAAAATCGGGCAACTTTGAGGGCAATGGCTGAGTTTGGTCTGATTCTGTTTTATTTCTACATATGCGATCGAACCGACTTACTTGGAGATTCTACAAAGAACTATAATCGGGATCTTTTCATTTTCCTCTTCATTCTTCTGCTTATAGTTTCAGCAATGACTTCTTTGAAAAAGCATAATGACACATCATCATTTTCTGCACGAAGCATGCTTTACCTTAATCGACATCAAACAGAAGAATGGAAAGGATGGATGCAGGTCCTTTTTCTAATGTATCATTATTTTGCTGCTACGGAGATATACAATTCAATACGTGTTTTCATTGCCGCGTATGTTTGGATGACTGGGTTTGGCAACTTCTCCTATTATTATATCAGAAAAGATTTTAGCCTTCCACGCTTTGCTCAGATGATGTGGCGGCTTAACTTTTTCGTGGCCTTCTGCTGTATCGTTCTCAACAACGACTATATGCTCTATTATATATGTCCAATGCACACGCTTTTTACTTTGATGGTGTATGGAGCATTGGGTTATACTGATCCTGCAAAGCCTGATGTTCCCCGAATGCATGAGTGGCATTTCAGATCTGGGCTTGATCGCTACATTTGGATAGTTGGAATGATTTATGCCTACTTCCATCCAAATGTTGAGAAATGGATGGAAAAATTGGAAGAGAGTGAAACTAAGAGAAAAGTAACAATCAAAACCGGCATTGTGTCAGTTGCTTTATTTGTTGGGTATATGTGGTATGAATACATATACAAGCTGGACAAGCGTTTATATTTGCTTGAGGAATTTCACTCAGCACTTACGGAATTTCTCTTTGACCCTCTTTGCGTGGCTTGGCAAGATTACTTTGGAGACTTACATTTCACAGTTTCACATTTGGTTGAGGTATCTCATCGACTTTTTGAATTAACAAATACCCTCAAGACAGTGTTTGTACCCACAAAAGACAATCGGCGGCTTTTGCATAATTTTATTACTGGGGTTGCCATTTCTGTTTCTTTATATTGCATCGCTCTGATTCTGCTCCAGATCCCTCATTCAACGGTTTGA

Protein sequence

>Msa0615420

MLQTLPSSFRSLSRVSLFLCYLFIITLSHAFFTNSPTSSISSYLIGGLEMVVSGPITPGQVSFLLGVIPVFVTWIYSEYLEYKRTSSPTKVHSDINLDELGKDTIKEDDRAILLEAGLTRSASAKLHASSVKLNLIRFLTMDDSFLLENRATLRAMAEFGLILFYFYICDRTDLLGDSTKNYNRDLFIFLFILLLIVSAMTSLKKHNDTSSFSARSMLYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNSIRVFIAAYVWMTGFGNFSYYYIRKDFSLPRFAQMMWRLNFFVAFCCIVLNNDYMLYYICPMHTLFTLMVYGALGYTDPAKPDVPRMHEWHFRSGLDRYIWIVGMIYAYFHPNVEKWMEKLEESETKRKVTIKTGIVSVALFVGYMWYEYIYKLDKRLYLLEEFHSALTEFLFDPLCVAWQDYFGDLHFTVSHLVEVSHRLFELTNTLKTVFVPTKDNRRLLHNFITGVAISVSLYCIALILLQIPHSTV*