AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0305770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305770 MtrunA17_Chr2g0334041 88.773 383 16 8 1 378 1 361 0.0 643
Msa0305770 MtrunA17_Chr1g0155301 27.444 266 132 12 162 376 166 421 2.75e-13 70.9
Msa0305770 MtrunA17_Chr2g0286441 41.000 100 47 4 284 376 298 392 5.92e-13 69.7
Msa0305770 MtrunA17_Chr2g0278511 41.818 110 43 5 282 376 323 426 1.71e-12 68.6
Msa0305770 MtrunA17_Chr1g0196071 50.000 62 24 1 322 376 340 401 2.01e-12 68.2
Msa0305770 MtrunA17_Chr5g0404321 40.000 95 43 3 291 376 326 415 3.14e-12 67.4
Msa0305770 MtrunA17_Chr8g0373001 37.615 109 53 4 277 376 309 411 8.74e-12 66.2
Msa0305770 MtrunA17_Chr1g0201891 37.069 116 46 4 282 376 321 430 9.56e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305770 AT1G16070.1 56.231 329 127 6 62 378 74 397 6.48e-127 371
Msa0305770 AT1G16070.2 54.093 281 112 6 62 330 74 349 6.47e-97 293
Msa0305770 AT1G16070.3 53.604 222 86 6 62 271 74 290 2.13e-72 228
Msa0305770 AT2G18280.2 26.087 345 176 13 99 376 60 392 2.59e-16 80.1
Msa0305770 AT2G18280.1 26.087 345 176 13 99 376 60 392 2.59e-16 80.1
Msa0305770 AT1G47270.3 27.132 258 135 10 162 376 140 387 1.75e-12 68.6
Msa0305770 AT1G25280.3 32.609 138 68 3 259 376 134 266 1.76e-12 67.4
Msa0305770 AT1G25280.2 32.609 138 68 3 259 376 134 266 1.76e-12 67.4
Msa0305770 AT1G47270.2 27.132 258 135 10 162 376 164 411 1.79e-12 68.6
Msa0305770 AT1G47270.1 27.132 258 135 10 162 376 165 412 1.82e-12 68.6
Msa0305770 AT2G47900.3 53.226 62 22 2 322 376 345 406 2.98e-12 68.2
Msa0305770 AT2G47900.2 53.226 62 22 2 322 376 344 405 3.17e-12 67.8
Msa0305770 AT2G47900.1 53.226 62 22 2 322 376 344 405 3.17e-12 67.8
Msa0305770 AT1G25280.1 32.609 138 68 3 259 376 312 444 5.66e-12 67.4
Msa0305770 AT3G06380.2 45.902 61 27 1 322 376 227 287 6.16e-11 63.2

Find 130 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAAGCAAATGAAGATTT+TGG 0.158114 2_3:-63779328 Msa0305770:three_prime_UTR
TAAATTCCGAGACTTCTTTC+TGG 0.196069 2_3:+63779390 None:intergenic
TTTCAAACTCTTTGAAGATT+TGG 0.208848 2_3:-63780907 Msa0305770:CDS
GTTGAAAATGAGTTGGATTT+TGG 0.248838 2_3:+63781013 None:intergenic
GGTTCAGGTACAACACATTA+AGG 0.279223 2_3:-63780089 Msa0305770:intron
TTCAAACTCTTTGAAGATTT+GGG 0.291430 2_3:-63780906 Msa0305770:CDS
GTTTACTACTACGGGGCTTA+TGG 0.301473 2_3:+63780421 None:intergenic
CCTGTACATGTTGCTATTGT+AGG 0.305231 2_3:+63780296 None:intergenic
GGTATAAAGAGAGAAGAAAT+TGG 0.306355 2_3:+63780736 None:intergenic
GACTTCTTTCTGGATGGGGC+TGG 0.309885 2_3:+63779400 None:intergenic
ATCATCATCATTATCAGAAT+TGG 0.313960 2_3:+63780515 None:intergenic
CCGGTTCAAAATACCACATT+TGG 0.317816 2_3:-63780461 Msa0305770:CDS
TACGACCAAGGGTTTGGTTT+TGG 0.321955 2_3:+63781167 None:intergenic
AAACTTTCAGCTCACGTTAG+AGG 0.326554 2_3:-63779826 Msa0305770:intron
GAGCTTGACTATAGAGATAA+AGG 0.329596 2_3:-63779882 Msa0305770:CDS
ATTATTATTGTAGGAAGGTC+AGG 0.348153 2_3:-63780631 Msa0305770:intron
AGACCATTGCCTATAGATAT+TGG 0.366407 2_3:-63780812 Msa0305770:CDS
AGACAAAAGCTTCACTAACT+TGG 0.373859 2_3:+63779362 None:intergenic
AAAGACATAGATTGATGATT+GGG 0.380117 2_3:+63780245 None:intergenic
TTAAGGGACTGCCAATGAAT+TGG 0.380340 2_3:-63780072 Msa0305770:CDS
TGGTAGGGAGTTACAGATAC+AGG 0.380944 2_3:+63779020 None:intergenic
GCAACAAAGCTTTGCATCAA+TGG 0.384089 2_3:+63779500 None:intergenic
AAAATACCACATTTGGGATC+AGG 0.391655 2_3:-63780454 Msa0305770:CDS
TCCCACTCCGGCGCTTGTGG+TGG 0.398163 2_3:+63780580 None:intergenic
GTGTACTTGTGTTATTGTTA+AGG 0.401096 2_3:-63780786 Msa0305770:CDS
TGATGAAATTACGTCTTTCA+TGG 0.403271 2_3:-63779066 Msa0305770:three_prime_UTR
ACCTCCCACTCCGGCGCTTG+TGG 0.404570 2_3:+63780577 None:intergenic
AAAACATACGACCAAGGGTT+TGG 0.409386 2_3:+63781161 None:intergenic
ACTTCTTTCTGGATGGGGCT+GGG 0.409519 2_3:+63779401 None:intergenic
ATATCCTTTGACTGGTTACC+AGG 0.411071 2_3:-63779544 Msa0305770:CDS
GAAAGACATAGATTGATGAT+TGG 0.415034 2_3:+63780244 None:intergenic
TTCCTACCCTCCCTAGCTGC+AGG 0.422680 2_3:+63779686 None:intergenic
CTGCTGCTCCTGCTTCCTCC+TGG 0.428096 2_3:-63780865 Msa0305770:CDS
TAGTCTTGACATGTTACAAC+TGG 0.433529 2_3:+63778987 None:intergenic
TGTTAAGGAACCAACTCCTC+AGG 0.436248 2_3:-63780771 Msa0305770:CDS
CCGAGACTTCTTTCTGGATG+GGG 0.437564 2_3:+63779396 None:intergenic
TCTACATATCAAAGACTTGT+TGG 0.438291 2_3:+63780832 None:intergenic
GTACACCTTCCAATATCTAT+AGG 0.439094 2_3:+63780803 None:intergenic
TAAGGGACTGCCAATGAATT+GGG 0.444518 2_3:-63780071 Msa0305770:CDS
GTTACAGATACAGGGTAGTT+AGG 0.445615 2_3:+63779029 None:intergenic
ATTTACATTCTTTGATTCAA+AGG 0.454713 2_3:+63779155 None:intergenic
GTTTGCTATGATTAGGAGAA+TGG 0.459646 2_3:-63779721 Msa0305770:intron
GAGTTCAGAGGTTGAATCAA+TGG 0.461195 2_3:+63779442 None:intergenic
TCCGAGACTTCTTTCTGGAT+GGG 0.463268 2_3:+63779395 None:intergenic
CGGTTCAAAATACCACATTT+GGG 0.463937 2_3:-63780460 Msa0305770:CDS
GATAAAGGAAGGCCAGGACT+TGG 0.466820 2_3:-63779867 Msa0305770:CDS
GGGACGGCAGAATAGGAAAC+TGG 0.475585 2_3:-63780610 Msa0305770:CDS
AAGGTCAGGGACGGCAGAAT+AGG 0.479149 2_3:-63780617 Msa0305770:CDS
CCCACTCCGGCGCTTGTGGT+GGG 0.479209 2_3:+63780581 None:intergenic
TTCCGAGACTTCTTTCTGGA+TGG 0.480390 2_3:+63779394 None:intergenic
CAAGAGGTGGTTTACTACTA+CGG 0.486217 2_3:+63780412 None:intergenic
GAAGAATCAGAAGAAGGAAT+AGG 0.486222 2_3:+63780935 None:intergenic
ATCAAAGAATGTAAATGAGC+TGG 0.488067 2_3:-63779148 Msa0305770:three_prime_UTR
CTTCAAAGAGTTTGAAAAGT+GGG 0.488487 2_3:+63780913 None:intergenic
CTACATATCAAAGACTTGTT+GGG 0.489447 2_3:+63780833 None:intergenic
GTATAAAGAGAGAAGAAATT+GGG 0.490055 2_3:+63780737 None:intergenic
CGTGTTTGTTGAAAATGAGT+TGG 0.490098 2_3:+63781006 None:intergenic
TCATCATACATCTAAACTAC+TGG 0.491400 2_3:+63779083 None:intergenic
ATCTGCAGATATCCTTTGAC+TGG 0.494012 2_3:-63779552 Msa0305770:intron
CCAACTCCTCAGGGTCTCTC+CGG 0.498571 2_3:-63780761 Msa0305770:CDS
AAGAGGTGGTTTACTACTAC+GGG 0.499094 2_3:+63780413 None:intergenic
AAATACCACATTTGGGATCA+GGG 0.506568 2_3:-63780453 Msa0305770:CDS
GGTTGAATCAATGGTGGGAT+GGG 0.511915 2_3:+63779451 None:intergenic
CCGGAGAGACCCTGAGGAGT+TGG 0.514963 2_3:+63780761 None:intergenic
AAAGTAGACCAGGAGGAAGC+AGG 0.520011 2_3:+63780857 None:intergenic
AAGTGGGAAGAATCAGAAGA+AGG 0.520266 2_3:+63780929 None:intergenic
AGCAGACAATCCTGCAGCTA+GGG 0.521878 2_3:-63779696 Msa0305770:CDS
GGAAGCCAAACATATGCAAA+AGG 0.524760 2_3:+63779521 None:intergenic
CCTCCTACCTTGTTATAGAG+TGG 0.527819 2_3:+63780007 None:intergenic
TATAGAGATAAAGGAAGGCC+AGG 0.527875 2_3:-63779873 Msa0305770:CDS
GACAAAAGCTTCACTAACTT+GGG 0.533081 2_3:+63779363 None:intergenic
AAGCAGACAATCCTGCAGCT+AGG 0.533935 2_3:-63779697 Msa0305770:CDS
CTTGTTGGGTAAAGTAGACC+AGG 0.539180 2_3:+63780847 None:intergenic
TTTGCTATGATTAGGAGAAT+GGG 0.539684 2_3:-63779720 Msa0305770:intron
CAAAACCAAAACCAAACCCT+TGG 0.542341 2_3:-63781172 Msa0305770:CDS
CTGTGGCCCACCACAAGCGC+CGG 0.547264 2_3:-63780587 Msa0305770:CDS
AATAGTGAATCTTACAAAGT+CGG 0.547516 2_3:+63779197 None:intergenic
GTTCAGGTACAACACATTAA+GGG 0.551230 2_3:-63780088 Msa0305770:intron
CCCCATCCAGAAAGAAGTCT+CGG 0.552075 2_3:-63779396 Msa0305770:three_prime_UTR
GATCTCTGGATTCCAAGTCC+TGG 0.552518 2_3:+63779855 None:intergenic
AGGTTGAATCAATGGTGGGA+TGG 0.555878 2_3:+63779450 None:intergenic
AAGAGAGAAGAAATTGGGAC+CGG 0.559507 2_3:+63780742 None:intergenic
AGACAATCCTGCAGCTAGGG+AGG 0.560928 2_3:-63779693 Msa0305770:CDS
CCTACAATAGCAACATGTAC+AGG 0.562677 2_3:-63780296 Msa0305770:CDS
ACCACAAGCGCCGGAGTGGG+AGG 0.564951 2_3:-63780578 Msa0305770:CDS
CCCACCACAAGCGCCGGAGT+GGG 0.568859 2_3:-63780581 Msa0305770:CDS
AGAAGAGATCTTGAGTTCAG+AGG 0.571984 2_3:+63779430 None:intergenic
TCTTCAAAGAGTTTGAAAAG+TGG 0.573900 2_3:+63780912 None:intergenic
GACAATCCTGCAGCTAGGGA+GGG 0.574505 2_3:-63779692 Msa0305770:CDS
CCAAACATATGCAAAAGGCC+TGG 0.577415 2_3:+63779526 None:intergenic
AGCTTTGTTGCATAGTGTAG+TGG 0.581324 2_3:-63779488 Msa0305770:exon
GCCCACCACAAGCGCCGGAG+TGG 0.582189 2_3:-63780582 Msa0305770:CDS
ACAGTTACCGCTAACCTCAC+CGG 0.586784 2_3:-63780480 Msa0305770:CDS
AGGAGCAGCAGCTTCAGAGT+CGG 0.586966 2_3:+63780877 None:intergenic
TTATTATTGTAGGAAGGTCA+GGG 0.593344 2_3:-63780630 Msa0305770:intron
ATTTGAAAACATACGACCAA+GGG 0.596408 2_3:+63781156 None:intergenic
TTCAGAGGTTGAATCAATGG+TGG 0.596537 2_3:+63779445 None:intergenic
GTTAAGGAACCAACTCCTCA+GGG 0.602181 2_3:-63780770 Msa0305770:CDS
GGTGTGTCTAATCTTCAGCT+AGG 0.605551 2_3:-63779295 Msa0305770:three_prime_UTR
CATTGCCTATAGATATTGGA+AGG 0.608050 2_3:-63780808 Msa0305770:CDS
TGAAGTGAGACCTCCCACTC+CGG 0.610091 2_3:+63780568 None:intergenic
AGTGCATCAACTATTCTCAA+AGG 0.610912 2_3:-63780032 Msa0305770:CDS
ACAGTAGCTCAGAATCTCAA+AGG 0.612108 2_3:-63780546 Msa0305770:CDS
AAGGCCTGGTAACCAGTCAA+AGG 0.614442 2_3:+63779540 None:intergenic
TACTCAACAACAGCAAGAGG+TGG 0.614584 2_3:+63780399 None:intergenic
GTTGGTATCAATCTCGCTGA+GGG 0.614914 2_3:+63781132 None:intergenic
CTTCCAATATCTATAGGCAA+TGG 0.616470 2_3:+63780809 None:intergenic
ATGAATCTAACTAACCTGGT+TGG 0.618468 2_3:+63780214 None:intergenic
GCAGAATAGGAAACTGGCTG+TGG 0.618843 2_3:-63780604 Msa0305770:CDS
ATCCTGCAGCTAGGGAGGGT+AGG 0.625245 2_3:-63779688 Msa0305770:CDS
TCAGAGGTTGAATCAATGGT+GGG 0.626797 2_3:+63779446 None:intergenic
ATGCAGAACTGTAATGAGGA+AGG 0.628521 2_3:+63780971 None:intergenic
TTGACTATAGAGATAAAGGA+AGG 0.630332 2_3:-63779878 Msa0305770:CDS
GGTAGGGAGTTACAGATACA+GGG 0.632480 2_3:+63779021 None:intergenic
GCTTACTCAACAACAGCAAG+AGG 0.633778 2_3:+63780396 None:intergenic
GGACTGCCAATGAATTGGGA+AGG 0.634626 2_3:-63780067 Msa0305770:CDS
AGACAACAACAACAAGAACA+AGG 0.639788 2_3:-63781059 Msa0305770:CDS
GATATCCCTGATCCCAAATG+TGG 0.643558 2_3:+63780448 None:intergenic
CAGCAGCTTCAGAGTCGGAG+TGG 0.644616 2_3:+63780882 None:intergenic
TTGATACCAACGTTCAGCTG+AGG 0.647442 2_3:-63781120 Msa0305770:CDS
TATTGTAGGAAGGTCAGGGA+CGG 0.654971 2_3:-63780626 Msa0305770:intron
CGTTGGTATCAATCTCGCTG+AGG 0.663356 2_3:+63781131 None:intergenic
ACTATGCCTCAGCTGAACGT+TGG 0.664550 2_3:+63781114 None:intergenic
AAAGGATCCACTCTATAACA+AGG 0.665549 2_3:-63780014 Msa0305770:intron
TTGCATGCAGAACTGTAATG+AGG 0.667955 2_3:+63780967 None:intergenic
GATTTGAAAACATACGACCA+AGG 0.673412 2_3:+63781155 None:intergenic
TTGGGACCGGAGAGACCCTG+AGG 0.711109 2_3:+63780755 None:intergenic
TTGGTATCAATCTCGCTGAG+GGG 0.714521 2_3:+63781133 None:intergenic
GTTGGGTAAAGTAGACCAGG+AGG 0.744497 2_3:+63780850 None:intergenic
AGAGGTGGTTTACTACTACG+GGG 0.768271 2_3:+63780414 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTACTAACAATAAAAT+TGG - chr2_3:63780071-63780090 Msa0305770:CDS 10.0%
!! TTATTACTAACAATAAAATT+GGG - chr2_3:63780072-63780091 Msa0305770:CDS 10.0%
!! TTTATTACTAACAATAAAAT+TGG - chr2_3:63780071-63780090 Msa0305770:CDS 10.0%
!! TTATTACTAACAATAAAATT+GGG - chr2_3:63780072-63780091 Msa0305770:CDS 10.0%
!! AATCAACATATTATTATTGT+AGG - chr2_3:63779543-63779562 Msa0305770:CDS 15.0%
!! TATTACTAACAATAAAATTG+GGG - chr2_3:63780073-63780092 Msa0305770:CDS 15.0%
!! TTAATGAAAATCAATATCAA+TGG + chr2_3:63780242-63780261 None:intergenic 15.0%
!! AATCAACATATTATTATTGT+AGG - chr2_3:63779543-63779562 Msa0305770:CDS 15.0%
!! TATTACTAACAATAAAATTG+GGG - chr2_3:63780073-63780092 Msa0305770:CDS 15.0%
!! TTAATGAAAATCAATATCAA+TGG + chr2_3:63780242-63780261 None:intergenic 15.0%
!! TAGAATAGAATAGAATAGAA+TGG + chr2_3:63779495-63779514 None:intergenic 20.0%
!! AACATATTATTATTGTAGGA+AGG - chr2_3:63779547-63779566 Msa0305770:CDS 20.0%
!!! GTTTTTATGTTATAACAACT+CGG - chr2_3:63780409-63780428 Msa0305770:CDS 20.0%
!!! AGGAAAATCTAATTTTGTTA+TGG - chr2_3:63780515-63780534 Msa0305770:CDS 20.0%
!! ATTTACATTCTTTGATTCAA+AGG + chr2_3:63781031-63781050 None:intergenic 20.0%
!! TAGAATAGAATAGAATAGAA+TGG + chr2_3:63779495-63779514 None:intergenic 20.0%
!! AACATATTATTATTGTAGGA+AGG - chr2_3:63779547-63779566 Msa0305770:CDS 20.0%
!!! GTTTTTATGTTATAACAACT+CGG - chr2_3:63780409-63780428 Msa0305770:CDS 20.0%
!!! AGGAAAATCTAATTTTGTTA+TGG - chr2_3:63780515-63780534 Msa0305770:CDS 20.0%
!! ATTTACATTCTTTGATTCAA+AGG + chr2_3:63781031-63781050 None:intergenic 20.0%
!! TTTCAAACTCTTTGAAGATT+TGG - chr2_3:63779276-63779295 Msa0305770:three_prime_UTR 25.0%
!! TTCAAACTCTTTGAAGATTT+GGG - chr2_3:63779277-63779296 Msa0305770:three_prime_UTR 25.0%
! GTATAAAGAGAGAAGAAATT+GGG + chr2_3:63779449-63779468 None:intergenic 25.0%
! AGTGAATACATTACATACAT+AGG + chr2_3:63779471-63779490 None:intergenic 25.0%
! ATCATCATCATTATCAGAAT+TGG + chr2_3:63779671-63779690 None:intergenic 25.0%
!!! AATGATGATGATACTTTTCT+CGG - chr2_3:63779679-63779698 Msa0305770:CDS 25.0%
!! AAAGACATAGATTGATGATT+GGG + chr2_3:63779941-63779960 None:intergenic 25.0%
! TTATAACATAAAAACCCTTC+CGG + chr2_3:63780404-63780423 None:intergenic 25.0%
!! TCAAAAGCAAATGAAGATTT+TGG - chr2_3:63780855-63780874 Msa0305770:CDS 25.0%
! AATAGTGAATCTTACAAAGT+CGG + chr2_3:63780989-63781008 None:intergenic 25.0%
!!! TTACAACTGGTTTACATTTT+TGG + chr2_3:63781186-63781205 None:intergenic 25.0%
!! TTTCAAACTCTTTGAAGATT+TGG - chr2_3:63779276-63779295 Msa0305770:three_prime_UTR 25.0%
!! TTCAAACTCTTTGAAGATTT+GGG - chr2_3:63779277-63779296 Msa0305770:three_prime_UTR 25.0%
! GTATAAAGAGAGAAGAAATT+GGG + chr2_3:63779449-63779468 None:intergenic 25.0%
! AGTGAATACATTACATACAT+AGG + chr2_3:63779471-63779490 None:intergenic 25.0%
! ATCATCATCATTATCAGAAT+TGG + chr2_3:63779671-63779690 None:intergenic 25.0%
!!! AATGATGATGATACTTTTCT+CGG - chr2_3:63779679-63779698 Msa0305770:CDS 25.0%
!! AAAGACATAGATTGATGATT+GGG + chr2_3:63779941-63779960 None:intergenic 25.0%
! TTATAACATAAAAACCCTTC+CGG + chr2_3:63780404-63780423 None:intergenic 25.0%
!! TCAAAAGCAAATGAAGATTT+TGG - chr2_3:63780855-63780874 Msa0305770:CDS 25.0%
! AATAGTGAATCTTACAAAGT+CGG + chr2_3:63780989-63781008 None:intergenic 25.0%
!!! TTACAACTGGTTTACATTTT+TGG + chr2_3:63781186-63781205 None:intergenic 25.0%
ATTTGAAAACATACGACCAA+GGG + chr2_3:63779030-63779049 None:intergenic 30.0%
!! TTTTGGAAGAGAAACAACAT+TGG + chr2_3:63779156-63779175 None:intergenic 30.0%
!! GTTGAAAATGAGTTGGATTT+TGG + chr2_3:63779173-63779192 None:intergenic 30.0%
CTTCAAAGAGTTTGAAAAGT+GGG + chr2_3:63779273-63779292 None:intergenic 30.0%
TCTTCAAAGAGTTTGAAAAG+TGG + chr2_3:63779274-63779293 None:intergenic 30.0%
! CTACATATCAAAGACTTGTT+GGG + chr2_3:63779353-63779372 None:intergenic 30.0%
TCTACATATCAAAGACTTGT+TGG + chr2_3:63779354-63779373 None:intergenic 30.0%
! GTGTACTTGTGTTATTGTTA+AGG - chr2_3:63779397-63779416 Msa0305770:three_prime_UTR 30.0%
GGTATAAAGAGAGAAGAAAT+TGG + chr2_3:63779450-63779469 None:intergenic 30.0%
ATTATTATTGTAGGAAGGTC+AGG - chr2_3:63779552-63779571 Msa0305770:intron 30.0%
TTATTATTGTAGGAAGGTCA+GGG - chr2_3:63779553-63779572 Msa0305770:intron 30.0%
! TAACTAGTACATCATTTTGC+AGG - chr2_3:63779858-63779877 Msa0305770:CDS 30.0%
! GAAAGACATAGATTGATGAT+TGG + chr2_3:63779942-63779961 None:intergenic 30.0%
GAAAATGAATCTAACTAACC+TGG + chr2_3:63779976-63779995 None:intergenic 30.0%
TAACAATAAAATTGGGGTTC+AGG - chr2_3:63780079-63780098 Msa0305770:CDS 30.0%
! ATTTTTCCTTCCCAATTCAT+TGG + chr2_3:63780125-63780144 None:intergenic 30.0%
AATGAATTGGGAAGGAAAAA+TGG - chr2_3:63780124-63780143 Msa0305770:intron 30.0%
TTGACTATAGAGATAAAGGA+AGG - chr2_3:63780305-63780324 Msa0305770:CDS 30.0%
TATAACATAAAAACCCTTCC+GGG + chr2_3:63780403-63780422 None:intergenic 30.0%
!! GATTTGTGTTTGCTATGATT+AGG - chr2_3:63780455-63780474 Msa0305770:CDS 30.0%
! TTTGCTATGATTAGGAGAAT+GGG - chr2_3:63780463-63780482 Msa0305770:CDS 30.0%
!! CTAATTTTGTTATGGACTAC+AGG - chr2_3:63780523-63780542 Msa0305770:CDS 30.0%
!!! GAAGATTTTGGAGTTGTATT+TGG - chr2_3:63780867-63780886 Msa0305770:CDS 30.0%
!! ACATTCATTTTTGCGATAGT+TGG + chr2_3:63780929-63780948 None:intergenic 30.0%
ATCAAAGAATGTAAATGAGC+TGG - chr2_3:63781035-63781054 Msa0305770:CDS 30.0%
TCATCATACATCTAAACTAC+TGG + chr2_3:63781103-63781122 None:intergenic 30.0%
TGATGAAATTACGTCTTTCA+TGG - chr2_3:63781117-63781136 Msa0305770:CDS 30.0%
!!! ACTGGTTTACATTTTTGGTA+GGG + chr2_3:63781181-63781200 None:intergenic 30.0%
!!! AACTGGTTTACATTTTTGGT+AGG + chr2_3:63781182-63781201 None:intergenic 30.0%
ATTTGAAAACATACGACCAA+GGG + chr2_3:63779030-63779049 None:intergenic 30.0%
!! TTTTGGAAGAGAAACAACAT+TGG + chr2_3:63779156-63779175 None:intergenic 30.0%
!! GTTGAAAATGAGTTGGATTT+TGG + chr2_3:63779173-63779192 None:intergenic 30.0%
CTTCAAAGAGTTTGAAAAGT+GGG + chr2_3:63779273-63779292 None:intergenic 30.0%
TCTTCAAAGAGTTTGAAAAG+TGG + chr2_3:63779274-63779293 None:intergenic 30.0%
! CTACATATCAAAGACTTGTT+GGG + chr2_3:63779353-63779372 None:intergenic 30.0%
TCTACATATCAAAGACTTGT+TGG + chr2_3:63779354-63779373 None:intergenic 30.0%
! GTGTACTTGTGTTATTGTTA+AGG - chr2_3:63779397-63779416 Msa0305770:three_prime_UTR 30.0%
GGTATAAAGAGAGAAGAAAT+TGG + chr2_3:63779450-63779469 None:intergenic 30.0%
ATTATTATTGTAGGAAGGTC+AGG - chr2_3:63779552-63779571 Msa0305770:intron 30.0%
TTATTATTGTAGGAAGGTCA+GGG - chr2_3:63779553-63779572 Msa0305770:intron 30.0%
! TAACTAGTACATCATTTTGC+AGG - chr2_3:63779858-63779877 Msa0305770:CDS 30.0%
! GAAAGACATAGATTGATGAT+TGG + chr2_3:63779942-63779961 None:intergenic 30.0%
GAAAATGAATCTAACTAACC+TGG + chr2_3:63779976-63779995 None:intergenic 30.0%
TAACAATAAAATTGGGGTTC+AGG - chr2_3:63780079-63780098 Msa0305770:CDS 30.0%
! ATTTTTCCTTCCCAATTCAT+TGG + chr2_3:63780125-63780144 None:intergenic 30.0%
AATGAATTGGGAAGGAAAAA+TGG - chr2_3:63780124-63780143 Msa0305770:intron 30.0%
TTGACTATAGAGATAAAGGA+AGG - chr2_3:63780305-63780324 Msa0305770:CDS 30.0%
TATAACATAAAAACCCTTCC+GGG + chr2_3:63780403-63780422 None:intergenic 30.0%
!! GATTTGTGTTTGCTATGATT+AGG - chr2_3:63780455-63780474 Msa0305770:CDS 30.0%
! TTTGCTATGATTAGGAGAAT+GGG - chr2_3:63780463-63780482 Msa0305770:CDS 30.0%
!! CTAATTTTGTTATGGACTAC+AGG - chr2_3:63780523-63780542 Msa0305770:CDS 30.0%
!!! GAAGATTTTGGAGTTGTATT+TGG - chr2_3:63780867-63780886 Msa0305770:CDS 30.0%
!! ACATTCATTTTTGCGATAGT+TGG + chr2_3:63780929-63780948 None:intergenic 30.0%
ATCAAAGAATGTAAATGAGC+TGG - chr2_3:63781035-63781054 Msa0305770:CDS 30.0%
TCATCATACATCTAAACTAC+TGG + chr2_3:63781103-63781122 None:intergenic 30.0%
TGATGAAATTACGTCTTTCA+TGG - chr2_3:63781117-63781136 Msa0305770:CDS 30.0%
!!! ACTGGTTTACATTTTTGGTA+GGG + chr2_3:63781181-63781200 None:intergenic 30.0%
!!! AACTGGTTTACATTTTTGGT+AGG + chr2_3:63781182-63781201 None:intergenic 30.0%
GATTTGAAAACATACGACCA+AGG + chr2_3:63779031-63779050 None:intergenic 35.0%
AGACAACAACAACAAGAACA+AGG - chr2_3:63779124-63779143 Msa0305770:three_prime_UTR 35.0%
! CGTGTTTGTTGAAAATGAGT+TGG + chr2_3:63779180-63779199 None:intergenic 35.0%
! ACTCATTTTCAACAAACACG+AGG - chr2_3:63779180-63779199 Msa0305770:three_prime_UTR 35.0%
GAAGAATCAGAAGAAGGAAT+AGG + chr2_3:63779251-63779270 None:intergenic 35.0%
AGACCATTGCCTATAGATAT+TGG - chr2_3:63779371-63779390 Msa0305770:three_prime_UTR 35.0%
CTTCCAATATCTATAGGCAA+TGG + chr2_3:63779377-63779396 None:intergenic 35.0%
CATTGCCTATAGATATTGGA+AGG - chr2_3:63779375-63779394 Msa0305770:three_prime_UTR 35.0%
GTACACCTTCCAATATCTAT+AGG + chr2_3:63779383-63779402 None:intergenic 35.0%
!! CCAAATGTGGTATTTTGAAC+CGG + chr2_3:63779725-63779744 None:intergenic 35.0%
CGGTTCAAAATACCACATTT+GGG - chr2_3:63779723-63779742 Msa0305770:intron 35.0%
! AAAATACCACATTTGGGATC+AGG - chr2_3:63779729-63779748 Msa0305770:intron 35.0%
! AAATACCACATTTGGGATCA+GGG - chr2_3:63779730-63779749 Msa0305770:intron 35.0%
ATGAATCTAACTAACCTGGT+TGG + chr2_3:63779972-63779991 None:intergenic 35.0%
GTTCAGGTACAACACATTAA+GGG - chr2_3:63780095-63780114 Msa0305770:intron 35.0%
AGTGCATCAACTATTCTCAA+AGG - chr2_3:63780151-63780170 Msa0305770:intron 35.0%
AAAGGATCCACTCTATAACA+AGG - chr2_3:63780169-63780188 Msa0305770:intron 35.0%
TTGCTTTGTACTCTTGATGA+AGG + chr2_3:63780278-63780297 None:intergenic 35.0%
GAGCTTGACTATAGAGATAA+AGG - chr2_3:63780301-63780320 Msa0305770:CDS 35.0%
!! GTTTGCTATGATTAGGAGAA+TGG - chr2_3:63780462-63780481 Msa0305770:CDS 35.0%
!!! GACCTTAATGTGTTTTGAAG+AGG - chr2_3:63780574-63780593 Msa0305770:CDS 35.0%
!!! CTTAATGTGTTTTGAAGAGG+CGG - chr2_3:63780577-63780596 Msa0305770:CDS 35.0%
!!! TTAATGTGTTTTGAAGAGGC+GGG - chr2_3:63780578-63780597 Msa0305770:CDS 35.0%
TAAATTCCGAGACTTCTTTC+TGG + chr2_3:63780796-63780815 None:intergenic 35.0%
GACAAAAGCTTCACTAACTT+GGG + chr2_3:63780823-63780842 None:intergenic 35.0%
AGACAAAAGCTTCACTAACT+TGG + chr2_3:63780824-63780843 None:intergenic 35.0%
!! TCATTTTTGCGATAGTTGGA+TGG + chr2_3:63780925-63780944 None:intergenic 35.0%
GATTTGAAAACATACGACCA+AGG + chr2_3:63779031-63779050 None:intergenic 35.0%
AGACAACAACAACAAGAACA+AGG - chr2_3:63779124-63779143 Msa0305770:three_prime_UTR 35.0%
! CGTGTTTGTTGAAAATGAGT+TGG + chr2_3:63779180-63779199 None:intergenic 35.0%
! ACTCATTTTCAACAAACACG+AGG - chr2_3:63779180-63779199 Msa0305770:three_prime_UTR 35.0%
GAAGAATCAGAAGAAGGAAT+AGG + chr2_3:63779251-63779270 None:intergenic 35.0%
AGACCATTGCCTATAGATAT+TGG - chr2_3:63779371-63779390 Msa0305770:three_prime_UTR 35.0%
CTTCCAATATCTATAGGCAA+TGG + chr2_3:63779377-63779396 None:intergenic 35.0%
CATTGCCTATAGATATTGGA+AGG - chr2_3:63779375-63779394 Msa0305770:three_prime_UTR 35.0%
GTACACCTTCCAATATCTAT+AGG + chr2_3:63779383-63779402 None:intergenic 35.0%
!! CCAAATGTGGTATTTTGAAC+CGG + chr2_3:63779725-63779744 None:intergenic 35.0%
CGGTTCAAAATACCACATTT+GGG - chr2_3:63779723-63779742 Msa0305770:intron 35.0%
! AAAATACCACATTTGGGATC+AGG - chr2_3:63779729-63779748 Msa0305770:intron 35.0%
! AAATACCACATTTGGGATCA+GGG - chr2_3:63779730-63779749 Msa0305770:intron 35.0%
ATGAATCTAACTAACCTGGT+TGG + chr2_3:63779972-63779991 None:intergenic 35.0%
GTTCAGGTACAACACATTAA+GGG - chr2_3:63780095-63780114 Msa0305770:intron 35.0%
AGTGCATCAACTATTCTCAA+AGG - chr2_3:63780151-63780170 Msa0305770:intron 35.0%
AAAGGATCCACTCTATAACA+AGG - chr2_3:63780169-63780188 Msa0305770:intron 35.0%
TTGCTTTGTACTCTTGATGA+AGG + chr2_3:63780278-63780297 None:intergenic 35.0%
GAGCTTGACTATAGAGATAA+AGG - chr2_3:63780301-63780320 Msa0305770:CDS 35.0%
!! GTTTGCTATGATTAGGAGAA+TGG - chr2_3:63780462-63780481 Msa0305770:CDS 35.0%
!!! GACCTTAATGTGTTTTGAAG+AGG - chr2_3:63780574-63780593 Msa0305770:CDS 35.0%
!!! CTTAATGTGTTTTGAAGAGG+CGG - chr2_3:63780577-63780596 Msa0305770:CDS 35.0%
!!! TTAATGTGTTTTGAAGAGGC+GGG - chr2_3:63780578-63780597 Msa0305770:CDS 35.0%
TAAATTCCGAGACTTCTTTC+TGG + chr2_3:63780796-63780815 None:intergenic 35.0%
GACAAAAGCTTCACTAACTT+GGG + chr2_3:63780823-63780842 None:intergenic 35.0%
AGACAAAAGCTTCACTAACT+TGG + chr2_3:63780824-63780843 None:intergenic 35.0%
!! TCATTTTTGCGATAGTTGGA+TGG + chr2_3:63780925-63780944 None:intergenic 35.0%
!!! CAAGGGTTTGGTTTTGGTTT+TGG + chr2_3:63779013-63779032 None:intergenic 40.0%
CAAAACCAAAACCAAACCCT+TGG - chr2_3:63779011-63779030 Msa0305770:three_prime_UTR 40.0%
AAAACATACGACCAAGGGTT+TGG + chr2_3:63779025-63779044 None:intergenic 40.0%
ATGCAGAACTGTAATGAGGA+AGG + chr2_3:63779215-63779234 None:intergenic 40.0%
TTGCATGCAGAACTGTAATG+AGG + chr2_3:63779219-63779238 None:intergenic 40.0%
AAGTGGGAAGAATCAGAAGA+AGG + chr2_3:63779257-63779276 None:intergenic 40.0%
AAGAGAGAAGAAATTGGGAC+CGG + chr2_3:63779444-63779463 None:intergenic 40.0%
ACAGTAGCTCAGAATCTCAA+AGG - chr2_3:63779637-63779656 Msa0305770:intron 40.0%
CCGGTTCAAAATACCACATT+TGG - chr2_3:63779722-63779741 Msa0305770:intron 40.0%
AAGAGGTGGTTTACTACTAC+GGG + chr2_3:63779773-63779792 None:intergenic 40.0%
CAAGAGGTGGTTTACTACTA+CGG + chr2_3:63779774-63779793 None:intergenic 40.0%
AGGTGGAGATTGAGAGATTT+AGG + chr2_3:63779812-63779831 None:intergenic 40.0%
TAAATCTCTCAATCTCCACC+TGG - chr2_3:63779811-63779830 Msa0305770:intron 40.0%
CTAGTTAGCAGAGAAGAATG+AGG + chr2_3:63779845-63779864 None:intergenic 40.0%
! CCTGTACATGTTGCTATTGT+AGG + chr2_3:63779890-63779909 None:intergenic 40.0%
CCTACAATAGCAACATGTAC+AGG - chr2_3:63779887-63779906 Msa0305770:CDS 40.0%
GTCTTTCAAAAACACCAACC+AGG - chr2_3:63779955-63779974 Msa0305770:intron 40.0%
GGTTCAGGTACAACACATTA+AGG - chr2_3:63780094-63780113 Msa0305770:intron 40.0%
TTAAGGGACTGCCAATGAAT+TGG - chr2_3:63780111-63780130 Msa0305770:intron 40.0%
TAAGGGACTGCCAATGAATT+GGG - chr2_3:63780112-63780131 Msa0305770:intron 40.0%
GATCCACTCTATAACAAGGT+AGG - chr2_3:63780173-63780192 Msa0305770:intron 40.0%
AAAGAAACTTCCCCTAAGTG+AGG + chr2_3:63780204-63780223 None:intergenic 40.0%
TATAGAGATAAAGGAAGGCC+AGG - chr2_3:63780310-63780329 Msa0305770:intron 40.0%
! GAAAGTTTTTCACGGATCTC+TGG + chr2_3:63780345-63780364 None:intergenic 40.0%
! CGTGAGCTGAAAGTTTTTCA+CGG + chr2_3:63780353-63780372 None:intergenic 40.0%
AAACTTTCAGCTCACGTTAG+AGG - chr2_3:63780357-63780376 Msa0305770:intron 40.0%
CGCCTCTTCAAAACACATTA+AGG + chr2_3:63780579-63780598 None:intergenic 40.0%
!!! TAATGTGTTTTGAAGAGGCG+GGG - chr2_3:63780579-63780598 Msa0305770:CDS 40.0%
ATTGACAGAGGAAATGGTAC+TGG + chr2_3:63780613-63780632 None:intergenic 40.0%
ATCTGCAGATATCCTTTGAC+TGG - chr2_3:63780631-63780650 Msa0305770:intron 40.0%
! ATATCCTTTGACTGGTTACC+AGG - chr2_3:63780639-63780658 Msa0305770:intron 40.0%
GGAAGCCAAACATATGCAAA+AGG + chr2_3:63780665-63780684 None:intergenic 40.0%
GCAACAAAGCTTTGCATCAA+TGG + chr2_3:63780686-63780705 None:intergenic 40.0%
!! AGCTTTGTTGCATAGTGTAG+TGG - chr2_3:63780695-63780714 Msa0305770:intron 40.0%
TCAGAGGTTGAATCAATGGT+GGG + chr2_3:63780740-63780759 None:intergenic 40.0%
TTCAGAGGTTGAATCAATGG+TGG + chr2_3:63780741-63780760 None:intergenic 40.0%
GAGTTCAGAGGTTGAATCAA+TGG + chr2_3:63780744-63780763 None:intergenic 40.0%
AGAAGAGATCTTGAGTTCAG+AGG + chr2_3:63780756-63780775 None:intergenic 40.0%
GTTACAGATACAGGGTAGTT+AGG + chr2_3:63781157-63781176 None:intergenic 40.0%
!!! CAAGGGTTTGGTTTTGGTTT+TGG + chr2_3:63779013-63779032 None:intergenic 40.0%
CAAAACCAAAACCAAACCCT+TGG - chr2_3:63779011-63779030 Msa0305770:three_prime_UTR 40.0%
AAAACATACGACCAAGGGTT+TGG + chr2_3:63779025-63779044 None:intergenic 40.0%
ATGCAGAACTGTAATGAGGA+AGG + chr2_3:63779215-63779234 None:intergenic 40.0%
TTGCATGCAGAACTGTAATG+AGG + chr2_3:63779219-63779238 None:intergenic 40.0%
AAGTGGGAAGAATCAGAAGA+AGG + chr2_3:63779257-63779276 None:intergenic 40.0%
AAGAGAGAAGAAATTGGGAC+CGG + chr2_3:63779444-63779463 None:intergenic 40.0%
ACAGTAGCTCAGAATCTCAA+AGG - chr2_3:63779637-63779656 Msa0305770:intron 40.0%
CCGGTTCAAAATACCACATT+TGG - chr2_3:63779722-63779741 Msa0305770:intron 40.0%
AAGAGGTGGTTTACTACTAC+GGG + chr2_3:63779773-63779792 None:intergenic 40.0%
CAAGAGGTGGTTTACTACTA+CGG + chr2_3:63779774-63779793 None:intergenic 40.0%
AGGTGGAGATTGAGAGATTT+AGG + chr2_3:63779812-63779831 None:intergenic 40.0%
TAAATCTCTCAATCTCCACC+TGG - chr2_3:63779811-63779830 Msa0305770:intron 40.0%
CTAGTTAGCAGAGAAGAATG+AGG + chr2_3:63779845-63779864 None:intergenic 40.0%
! CCTGTACATGTTGCTATTGT+AGG + chr2_3:63779890-63779909 None:intergenic 40.0%
CCTACAATAGCAACATGTAC+AGG - chr2_3:63779887-63779906 Msa0305770:CDS 40.0%
GTCTTTCAAAAACACCAACC+AGG - chr2_3:63779955-63779974 Msa0305770:intron 40.0%
GGTTCAGGTACAACACATTA+AGG - chr2_3:63780094-63780113 Msa0305770:intron 40.0%
TTAAGGGACTGCCAATGAAT+TGG - chr2_3:63780111-63780130 Msa0305770:intron 40.0%
TAAGGGACTGCCAATGAATT+GGG - chr2_3:63780112-63780131 Msa0305770:intron 40.0%
GATCCACTCTATAACAAGGT+AGG - chr2_3:63780173-63780192 Msa0305770:intron 40.0%
AAAGAAACTTCCCCTAAGTG+AGG + chr2_3:63780204-63780223 None:intergenic 40.0%
TATAGAGATAAAGGAAGGCC+AGG - chr2_3:63780310-63780329 Msa0305770:intron 40.0%
! GAAAGTTTTTCACGGATCTC+TGG + chr2_3:63780345-63780364 None:intergenic 40.0%
! CGTGAGCTGAAAGTTTTTCA+CGG + chr2_3:63780353-63780372 None:intergenic 40.0%
AAACTTTCAGCTCACGTTAG+AGG - chr2_3:63780357-63780376 Msa0305770:intron 40.0%
CGCCTCTTCAAAACACATTA+AGG + chr2_3:63780579-63780598 None:intergenic 40.0%
!!! TAATGTGTTTTGAAGAGGCG+GGG - chr2_3:63780579-63780598 Msa0305770:CDS 40.0%
ATTGACAGAGGAAATGGTAC+TGG + chr2_3:63780613-63780632 None:intergenic 40.0%
ATCTGCAGATATCCTTTGAC+TGG - chr2_3:63780631-63780650 Msa0305770:intron 40.0%
! ATATCCTTTGACTGGTTACC+AGG - chr2_3:63780639-63780658 Msa0305770:intron 40.0%
GGAAGCCAAACATATGCAAA+AGG + chr2_3:63780665-63780684 None:intergenic 40.0%
GCAACAAAGCTTTGCATCAA+TGG + chr2_3:63780686-63780705 None:intergenic 40.0%
!! AGCTTTGTTGCATAGTGTAG+TGG - chr2_3:63780695-63780714 Msa0305770:intron 40.0%
TCAGAGGTTGAATCAATGGT+GGG + chr2_3:63780740-63780759 None:intergenic 40.0%
TTCAGAGGTTGAATCAATGG+TGG + chr2_3:63780741-63780760 None:intergenic 40.0%
GAGTTCAGAGGTTGAATCAA+TGG + chr2_3:63780744-63780763 None:intergenic 40.0%
AGAAGAGATCTTGAGTTCAG+AGG + chr2_3:63780756-63780775 None:intergenic 40.0%
GTTACAGATACAGGGTAGTT+AGG + chr2_3:63781157-63781176 None:intergenic 40.0%
!! TACGACCAAGGGTTTGGTTT+TGG + chr2_3:63779019-63779038 None:intergenic 45.0%
TTGGTATCAATCTCGCTGAG+GGG + chr2_3:63779053-63779072 None:intergenic 45.0%
GTTGGTATCAATCTCGCTGA+GGG + chr2_3:63779054-63779073 None:intergenic 45.0%
TTGATACCAACGTTCAGCTG+AGG - chr2_3:63779063-63779082 Msa0305770:three_prime_UTR 45.0%
CTTGTTGGGTAAAGTAGACC+AGG + chr2_3:63779339-63779358 None:intergenic 45.0%
TGTTAAGGAACCAACTCCTC+AGG - chr2_3:63779412-63779431 Msa0305770:three_prime_UTR 45.0%
GTTAAGGAACCAACTCCTCA+GGG - chr2_3:63779413-63779432 Msa0305770:three_prime_UTR 45.0%
TATTGTAGGAAGGTCAGGGA+CGG - chr2_3:63779557-63779576 Msa0305770:intron 45.0%
! TTTTGAACCGGTGAGGTTAG+CGG + chr2_3:63779713-63779732 None:intergenic 45.0%
!! TGTGGTATTTTGAACCGGTG+AGG + chr2_3:63779720-63779739 None:intergenic 45.0%
GATATCCCTGATCCCAAATG+TGG + chr2_3:63779738-63779757 None:intergenic 45.0%
GTTTACTACTACGGGGCTTA+TGG + chr2_3:63779765-63779784 None:intergenic 45.0%
AGAGGTGGTTTACTACTACG+GGG + chr2_3:63779772-63779791 None:intergenic 45.0%
TACTCAACAACAGCAAGAGG+TGG + chr2_3:63779787-63779806 None:intergenic 45.0%
GCTTACTCAACAACAGCAAG+AGG + chr2_3:63779790-63779809 None:intergenic 45.0%
GTTAGCAGAGAAGAATGAGG+CGG + chr2_3:63779842-63779861 None:intergenic 45.0%
! CCTCCTACCTTGTTATAGAG+TGG + chr2_3:63780179-63780198 None:intergenic 45.0%
CCACTCTATAACAAGGTAGG+AGG - chr2_3:63780176-63780195 Msa0305770:intron 45.0%
AGAGGTAACATCATTGACGC+CGG - chr2_3:63780375-63780394 Msa0305770:intron 45.0%
ATAAAAACCCTTCCGGGTTC+CGG + chr2_3:63780397-63780416 None:intergenic 45.0%
CTGCAGATTGACAGAGGAAA+TGG + chr2_3:63780619-63780638 None:intergenic 45.0%
GGATATCTGCAGATTGACAG+AGG + chr2_3:63780625-63780644 None:intergenic 45.0%
CCAAACATATGCAAAAGGCC+TGG + chr2_3:63780660-63780679 None:intergenic 45.0%
! CCAGGCCTTTTGCATATGTT+TGG - chr2_3:63780657-63780676 Msa0305770:intron 45.0%
! GGTTGAATCAATGGTGGGAT+GGG + chr2_3:63780735-63780754 None:intergenic 45.0%
! AGGTTGAATCAATGGTGGGA+TGG + chr2_3:63780736-63780755 None:intergenic 45.0%
TCCGAGACTTCTTTCTGGAT+GGG + chr2_3:63780791-63780810 None:intergenic 45.0%
TTCCGAGACTTCTTTCTGGA+TGG + chr2_3:63780792-63780811 None:intergenic 45.0%
GGTGTGTCTAATCTTCAGCT+AGG - chr2_3:63780888-63780907 Msa0305770:CDS 45.0%
GGTAGGGAGTTACAGATACA+GGG + chr2_3:63781165-63781184 None:intergenic 45.0%
TGGTAGGGAGTTACAGATAC+AGG + chr2_3:63781166-63781185 None:intergenic 45.0%
!! TACGACCAAGGGTTTGGTTT+TGG + chr2_3:63779019-63779038 None:intergenic 45.0%
TTGGTATCAATCTCGCTGAG+GGG + chr2_3:63779053-63779072 None:intergenic 45.0%
GTTGGTATCAATCTCGCTGA+GGG + chr2_3:63779054-63779073 None:intergenic 45.0%
TTGATACCAACGTTCAGCTG+AGG - chr2_3:63779063-63779082 Msa0305770:three_prime_UTR 45.0%
CTTGTTGGGTAAAGTAGACC+AGG + chr2_3:63779339-63779358 None:intergenic 45.0%
TGTTAAGGAACCAACTCCTC+AGG - chr2_3:63779412-63779431 Msa0305770:three_prime_UTR 45.0%
GTTAAGGAACCAACTCCTCA+GGG - chr2_3:63779413-63779432 Msa0305770:three_prime_UTR 45.0%
TATTGTAGGAAGGTCAGGGA+CGG - chr2_3:63779557-63779576 Msa0305770:intron 45.0%
! TTTTGAACCGGTGAGGTTAG+CGG + chr2_3:63779713-63779732 None:intergenic 45.0%
!! TGTGGTATTTTGAACCGGTG+AGG + chr2_3:63779720-63779739 None:intergenic 45.0%
GATATCCCTGATCCCAAATG+TGG + chr2_3:63779738-63779757 None:intergenic 45.0%
GTTTACTACTACGGGGCTTA+TGG + chr2_3:63779765-63779784 None:intergenic 45.0%
AGAGGTGGTTTACTACTACG+GGG + chr2_3:63779772-63779791 None:intergenic 45.0%
TACTCAACAACAGCAAGAGG+TGG + chr2_3:63779787-63779806 None:intergenic 45.0%
GCTTACTCAACAACAGCAAG+AGG + chr2_3:63779790-63779809 None:intergenic 45.0%
GTTAGCAGAGAAGAATGAGG+CGG + chr2_3:63779842-63779861 None:intergenic 45.0%
! CCTCCTACCTTGTTATAGAG+TGG + chr2_3:63780179-63780198 None:intergenic 45.0%
CCACTCTATAACAAGGTAGG+AGG - chr2_3:63780176-63780195 Msa0305770:intron 45.0%
AGAGGTAACATCATTGACGC+CGG - chr2_3:63780375-63780394 Msa0305770:intron 45.0%
ATAAAAACCCTTCCGGGTTC+CGG + chr2_3:63780397-63780416 None:intergenic 45.0%
CTGCAGATTGACAGAGGAAA+TGG + chr2_3:63780619-63780638 None:intergenic 45.0%
GGATATCTGCAGATTGACAG+AGG + chr2_3:63780625-63780644 None:intergenic 45.0%
CCAAACATATGCAAAAGGCC+TGG + chr2_3:63780660-63780679 None:intergenic 45.0%
! CCAGGCCTTTTGCATATGTT+TGG - chr2_3:63780657-63780676 Msa0305770:intron 45.0%
! GGTTGAATCAATGGTGGGAT+GGG + chr2_3:63780735-63780754 None:intergenic 45.0%
! AGGTTGAATCAATGGTGGGA+TGG + chr2_3:63780736-63780755 None:intergenic 45.0%
TCCGAGACTTCTTTCTGGAT+GGG + chr2_3:63780791-63780810 None:intergenic 45.0%
TTCCGAGACTTCTTTCTGGA+TGG + chr2_3:63780792-63780811 None:intergenic 45.0%
GGTGTGTCTAATCTTCAGCT+AGG - chr2_3:63780888-63780907 Msa0305770:CDS 45.0%
GGTAGGGAGTTACAGATACA+GGG + chr2_3:63781165-63781184 None:intergenic 45.0%
TGGTAGGGAGTTACAGATAC+AGG + chr2_3:63781166-63781185 None:intergenic 45.0%
CGTTGGTATCAATCTCGCTG+AGG + chr2_3:63779055-63779074 None:intergenic 50.0%
ACTATGCCTCAGCTGAACGT+TGG + chr2_3:63779072-63779091 None:intergenic 50.0%
AAAGTAGACCAGGAGGAAGC+AGG + chr2_3:63779329-63779348 None:intergenic 50.0%
GTTGGGTAAAGTAGACCAGG+AGG + chr2_3:63779336-63779355 None:intergenic 50.0%
GCAGAATAGGAAACTGGCTG+TGG - chr2_3:63779579-63779598 Msa0305770:intron 50.0%
ACAGTTACCGCTAACCTCAC+CGG - chr2_3:63779703-63779722 Msa0305770:CDS 50.0%
GGACTGCCAATGAATTGGGA+AGG - chr2_3:63780116-63780135 Msa0305770:intron 50.0%
GATAAAGGAAGGCCAGGACT+TGG - chr2_3:63780316-63780335 Msa0305770:intron 50.0%
GATCTCTGGATTCCAAGTCC+TGG + chr2_3:63780331-63780350 None:intergenic 50.0%
AAGCAGACAATCCTGCAGCT+AGG - chr2_3:63780486-63780505 Msa0305770:CDS 50.0%
AGCAGACAATCCTGCAGCTA+GGG - chr2_3:63780487-63780506 Msa0305770:CDS 50.0%
AAGGCCTGGTAACCAGTCAA+AGG + chr2_3:63780646-63780665 None:intergenic 50.0%
ACTTCTTTCTGGATGGGGCT+GGG + chr2_3:63780785-63780804 None:intergenic 50.0%
CCGAGACTTCTTTCTGGATG+GGG + chr2_3:63780790-63780809 None:intergenic 50.0%
CCCCATCCAGAAAGAAGTCT+CGG - chr2_3:63780787-63780806 Msa0305770:CDS 50.0%
CGTTGGTATCAATCTCGCTG+AGG + chr2_3:63779055-63779074 None:intergenic 50.0%
ACTATGCCTCAGCTGAACGT+TGG + chr2_3:63779072-63779091 None:intergenic 50.0%
AAAGTAGACCAGGAGGAAGC+AGG + chr2_3:63779329-63779348 None:intergenic 50.0%
GTTGGGTAAAGTAGACCAGG+AGG + chr2_3:63779336-63779355 None:intergenic 50.0%
GCAGAATAGGAAACTGGCTG+TGG - chr2_3:63779579-63779598 Msa0305770:intron 50.0%
ACAGTTACCGCTAACCTCAC+CGG - chr2_3:63779703-63779722 Msa0305770:CDS 50.0%
GGACTGCCAATGAATTGGGA+AGG - chr2_3:63780116-63780135 Msa0305770:intron 50.0%
GATAAAGGAAGGCCAGGACT+TGG - chr2_3:63780316-63780335 Msa0305770:intron 50.0%
GATCTCTGGATTCCAAGTCC+TGG + chr2_3:63780331-63780350 None:intergenic 50.0%
AAGCAGACAATCCTGCAGCT+AGG - chr2_3:63780486-63780505 Msa0305770:CDS 50.0%
AGCAGACAATCCTGCAGCTA+GGG - chr2_3:63780487-63780506 Msa0305770:CDS 50.0%
AAGGCCTGGTAACCAGTCAA+AGG + chr2_3:63780646-63780665 None:intergenic 50.0%
ACTTCTTTCTGGATGGGGCT+GGG + chr2_3:63780785-63780804 None:intergenic 50.0%
CCGAGACTTCTTTCTGGATG+GGG + chr2_3:63780790-63780809 None:intergenic 50.0%
CCCCATCCAGAAAGAAGTCT+CGG - chr2_3:63780787-63780806 Msa0305770:CDS 50.0%
AGGAGCAGCAGCTTCAGAGT+CGG + chr2_3:63779309-63779328 None:intergenic 55.0%
AAGGTCAGGGACGGCAGAAT+AGG - chr2_3:63779566-63779585 Msa0305770:intron 55.0%
GGGACGGCAGAATAGGAAAC+TGG - chr2_3:63779573-63779592 Msa0305770:intron 55.0%
TGAAGTGAGACCTCCCACTC+CGG + chr2_3:63779618-63779637 None:intergenic 55.0%
AGGTAGGAGGAGCCTCACTT+AGG - chr2_3:63780189-63780208 Msa0305770:intron 55.0%
GGTAGGAGGAGCCTCACTTA+GGG - chr2_3:63780190-63780209 Msa0305770:intron 55.0%
GTAGGAGGAGCCTCACTTAG+GGG - chr2_3:63780191-63780210 Msa0305770:intron 55.0%
ACATCATTGACGCCGGAACC+CGG - chr2_3:63780382-63780401 Msa0305770:intron 55.0%
AGACAATCCTGCAGCTAGGG+AGG - chr2_3:63780490-63780509 Msa0305770:CDS 55.0%
GACAATCCTGCAGCTAGGGA+GGG - chr2_3:63780491-63780510 Msa0305770:CDS 55.0%
GACTTCTTTCTGGATGGGGC+TGG + chr2_3:63780786-63780805 None:intergenic 55.0%
AGGAGCAGCAGCTTCAGAGT+CGG + chr2_3:63779309-63779328 None:intergenic 55.0%
AAGGTCAGGGACGGCAGAAT+AGG - chr2_3:63779566-63779585 Msa0305770:intron 55.0%
GGGACGGCAGAATAGGAAAC+TGG - chr2_3:63779573-63779592 Msa0305770:intron 55.0%
TGAAGTGAGACCTCCCACTC+CGG + chr2_3:63779618-63779637 None:intergenic 55.0%
AGGTAGGAGGAGCCTCACTT+AGG - chr2_3:63780189-63780208 Msa0305770:intron 55.0%
GGTAGGAGGAGCCTCACTTA+GGG - chr2_3:63780190-63780209 Msa0305770:intron 55.0%
GTAGGAGGAGCCTCACTTAG+GGG - chr2_3:63780191-63780210 Msa0305770:intron 55.0%
ACATCATTGACGCCGGAACC+CGG - chr2_3:63780382-63780401 Msa0305770:intron 55.0%
AGACAATCCTGCAGCTAGGG+AGG - chr2_3:63780490-63780509 Msa0305770:CDS 55.0%
GACAATCCTGCAGCTAGGGA+GGG - chr2_3:63780491-63780510 Msa0305770:CDS 55.0%
GACTTCTTTCTGGATGGGGC+TGG + chr2_3:63780786-63780805 None:intergenic 55.0%
CAGCAGCTTCAGAGTCGGAG+TGG + chr2_3:63779304-63779323 None:intergenic 60.0%
CCAACTCCTCAGGGTCTCTC+CGG - chr2_3:63779422-63779441 Msa0305770:three_prime_UTR 60.0%
CTCTCAATCTCCACCTGGCC+TGG - chr2_3:63779816-63779835 Msa0305770:intron 60.0%
CAGAGAAGAATGAGGCGGCC+AGG + chr2_3:63779837-63779856 None:intergenic 60.0%
ATTGACGCCGGAACCCGGAA+GGG - chr2_3:63780387-63780406 Msa0305770:intron 60.0%
ATCCTGCAGCTAGGGAGGGT+AGG - chr2_3:63780495-63780514 Msa0305770:CDS 60.0%
TTCCTACCCTCCCTAGCTGC+AGG + chr2_3:63780500-63780519 None:intergenic 60.0%
CAGCAGCTTCAGAGTCGGAG+TGG + chr2_3:63779304-63779323 None:intergenic 60.0%
CCAACTCCTCAGGGTCTCTC+CGG - chr2_3:63779422-63779441 Msa0305770:three_prime_UTR 60.0%
CTCTCAATCTCCACCTGGCC+TGG - chr2_3:63779816-63779835 Msa0305770:intron 60.0%
CAGAGAAGAATGAGGCGGCC+AGG + chr2_3:63779837-63779856 None:intergenic 60.0%
ATTGACGCCGGAACCCGGAA+GGG - chr2_3:63780387-63780406 Msa0305770:intron 60.0%
ATCCTGCAGCTAGGGAGGGT+AGG - chr2_3:63780495-63780514 Msa0305770:CDS 60.0%
TTCCTACCCTCCCTAGCTGC+AGG + chr2_3:63780500-63780519 None:intergenic 60.0%
CTGCTGCTCCTGCTTCCTCC+TGG - chr2_3:63779318-63779337 Msa0305770:three_prime_UTR 65.0%
CCGGAGAGACCCTGAGGAGT+TGG + chr2_3:63779425-63779444 None:intergenic 65.0%
TTGGGACCGGAGAGACCCTG+AGG + chr2_3:63779431-63779450 None:intergenic 65.0%
AAGAATGAGGCGGCCAGGCC+AGG + chr2_3:63779832-63779851 None:intergenic 65.0%
CATTGACGCCGGAACCCGGA+AGG - chr2_3:63780386-63780405 Msa0305770:intron 65.0%
CTGCTGCTCCTGCTTCCTCC+TGG - chr2_3:63779318-63779337 Msa0305770:three_prime_UTR 65.0%
CCGGAGAGACCCTGAGGAGT+TGG + chr2_3:63779425-63779444 None:intergenic 65.0%
TTGGGACCGGAGAGACCCTG+AGG + chr2_3:63779431-63779450 None:intergenic 65.0%
AAGAATGAGGCGGCCAGGCC+AGG + chr2_3:63779832-63779851 None:intergenic 65.0%
CATTGACGCCGGAACCCGGA+AGG - chr2_3:63780386-63780405 Msa0305770:intron 65.0%
CTGTGGCCCACCACAAGCGC+CGG - chr2_3:63779596-63779615 Msa0305770:intron 70.0%
CCCACTCCGGCGCTTGTGGT+GGG + chr2_3:63779605-63779624 None:intergenic 70.0%
!! CCCACCACAAGCGCCGGAGT+GGG - chr2_3:63779602-63779621 Msa0305770:intron 70.0%
TCCCACTCCGGCGCTTGTGG+TGG + chr2_3:63779606-63779625 None:intergenic 70.0%
!! ACCACAAGCGCCGGAGTGGG+AGG - chr2_3:63779605-63779624 Msa0305770:intron 70.0%
ACCTCCCACTCCGGCGCTTG+TGG + chr2_3:63779609-63779628 None:intergenic 70.0%
AATGAGGCGGCCAGGCCAGG+TGG + chr2_3:63779829-63779848 None:intergenic 70.0%
CTGTGGCCCACCACAAGCGC+CGG - chr2_3:63779596-63779615 Msa0305770:intron 70.0%
CCCACTCCGGCGCTTGTGGT+GGG + chr2_3:63779605-63779624 None:intergenic 70.0%
!! CCCACCACAAGCGCCGGAGT+GGG - chr2_3:63779602-63779621 Msa0305770:intron 70.0%
TCCCACTCCGGCGCTTGTGG+TGG + chr2_3:63779606-63779625 None:intergenic 70.0%
!! ACCACAAGCGCCGGAGTGGG+AGG - chr2_3:63779605-63779624 Msa0305770:intron 70.0%
ACCTCCCACTCCGGCGCTTG+TGG + chr2_3:63779609-63779628 None:intergenic 70.0%
AATGAGGCGGCCAGGCCAGG+TGG + chr2_3:63779829-63779848 None:intergenic 70.0%
!! GCCCACCACAAGCGCCGGAG+TGG - chr2_3:63779601-63779620 Msa0305770:intron 75.0%
!! GCCCACCACAAGCGCCGGAG+TGG - chr2_3:63779601-63779620 Msa0305770:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 63778999 63781206 63778999 ID=Msa0305770;Name=Msa0305770
chr2_3 mRNA 63778999 63781206 63778999 ID=Msa0305770-mRNA-1;Parent=Msa0305770;Name=Msa0305770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.85|1|1|1|7|492|378
chr2_3 exon 63778999 63779566 63778999 ID=Msa0305770-mRNA-1:exon:21307;Parent=Msa0305770-mRNA-1
chr2_3 exon 63779661 63779728 63779661 ID=Msa0305770-mRNA-1:exon:21306;Parent=Msa0305770-mRNA-1
chr2_3 exon 63779827 63779919 63779827 ID=Msa0305770-mRNA-1:exon:21305;Parent=Msa0305770-mRNA-1
chr2_3 exon 63780015 63780104 63780015 ID=Msa0305770-mRNA-1:exon:21304;Parent=Msa0305770-mRNA-1
chr2_3 exon 63780229 63780325 63780229 ID=Msa0305770-mRNA-1:exon:21303;Parent=Msa0305770-mRNA-1
chr2_3 exon 63780402 63780640 63780402 ID=Msa0305770-mRNA-1:exon:21302;Parent=Msa0305770-mRNA-1
chr2_3 exon 63780733 63781206 63780733 ID=Msa0305770-mRNA-1:exon:21301;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63780733 63781206 63780733 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63780402 63780640 63780402 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63780229 63780325 63780229 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63780015 63780104 63780015 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63779827 63779919 63779827 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63779661 63779728 63779661 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 CDS 63779491 63779566 63779491 ID=Msa0305770-mRNA-1:cds;Parent=Msa0305770-mRNA-1
chr2_3 three_prime_UTR 63778999 63779490 63778999 ID=Msa0305770-mRNA-1:three_prime_utr;Parent=Msa0305770-mRNA-1
Gene Sequence

>Msa0305770

ATGAAGAAAAACCAAAACCAAAACCAAACCCTTGGTCGTATGTTTTCAAATCCCCTCAGCGAGATTGATACCAACGTTCAGCTGAGGCATAGTCGTAGCTGCAGCAACACTTGTCTCTATGTAGCAGACAACAACAACAAGAACAAGGAAAATGCCAATGTTGTTTCTCTTCCAAAATCCAACTCATTTTCAACAAACACGAGGATTCTTAAGCCTTCCTCATTACAGTTCTGCATGCAAATCAACGATCCTATTCCTTCTTCTGATTCTTCCCACTTTTCAAACTCTTTGAAGATTTGGGACCACTCCGACTCTGAAGCTGCTGCTCCTGCTTCCTCCTGGTCTACTTTACCCAACAAGTCTTTGATATGTAGACCATTGCCTATAGATATTGGAAGGTGTACTTGTGTTATTGTTAAGGAACCAACTCCTCAGGGTCTCTCCGGTCCCAATTTCTTCTCTCTTTATACCTATGAAGGTCAGGGACGGCAGAATAGGAAACTGGCTGTGGCCCACCACAAGCGCCGGAGTGGGAGGTCTCACTTCACAGTAGCTCAGAATCTCAAAGGACTACTCTCCAATTCTGATAATGATGATGATACTTTTCTCGGTACAGTTACCGCTAACCTCACCGGTTCAAAATACCACATTTGGGATCAGGGATATCATCGCCATAAGCCCCGTAGTAGTAAACCACCTCTTGCTGTTGTTGAGTATGTACCTACAATAGCAACATGTACAGGAACTCACAGAAGCATCAAAGCTTATATACCCAATCATCAATCTATGTCTTTCAAAAACACCAACCAGGTACAACACATTAAGGGACTGCCAATGAATTGGGAAGGAAAAATGGACAAAGTGCATCAACTATTCTCAAAGGATCCACTCTATAACAAGAGTACAAAGCAATTTGAGCTTGACTATAGAGATAAAGGAAGGCCAGGACTTGGAATCCAGAGATCCGTGAAAAACTTTCAGCTCACGTTAGAGGAGAATGGGAAGCAGACAATCCTGCAGCTAGGGAGGGTAGGAAAATCTAATTTTGTTATGGACTACAGATATCCTTTGACTGGTTACCAGGCCTTTTGCATATGTTTGGCTTCCATTGATGCAAAGCTTTGTTGCATAGTGTAG
Protein sequence

>Msa0305770

MKKNQNQNQTLGRMFSNPLSEIDTNVQLRHSRSCSNTCLYVADNNNKNKENANVVSLPKSNSFSTNTRILKPSSLQFCMQINDPIPSSDSSHFSNSLKIWDHSDSEAAAPASSWSTLPNKSLICRPLPIDIGRCTCVIVKEPTPQGLSGPNFFSLYTYEGQGRQNRKLAVAHHKRRSGRSHFTVAQNLKGLLSNSDNDDDTFLGTVTANLTGSKYHIWDQGYHRHKPRSSKPPLAVVEYVPTIATCTGTHRSIKAYIPNHQSMSFKNTNQVQHIKGLPMNWEGKMDKVHQLFSKDPLYNKSTKQFELDYRDKGRPGLGIQRSVKNFQLTLEENGKQTILQLGRVGKSNFVMDYRYPLTGYQAFCICLASIDAKLCCIV*