AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0371320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371320 MtrunA17_Chr3g0118021 96.296 405 14 1 1 404 1 405 0.0 788
Msa0371320 MtrunA17_Chr1g0154431 47.656 128 58 4 282 404 82 205 7.55e-21 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371320 AT3G49080.1 63.356 292 92 5 123 404 144 430 1.18e-112 337
Msa0371320 AT1G74970.1 46.154 130 57 4 282 404 85 208 4.93e-23 96.7

Find 135 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGGGTATTGGGGAAATT+AGG 0.097022 3_1:-69490441 None:intergenic
GCCTGGTAACGGTAAATTTA+TGG 0.138790 3_1:+69491478 Msa0371320:CDS
GAAATTTGGTCTGTTGTATT+AGG 0.143967 3_1:+69493914 Msa0371320:three_prime_UTR
GAAGAGGATGCTTTGTTTAA+AGG 0.164710 3_1:+69490705 Msa0371320:CDS
GTGAAAGGCGGTGGTGTTTC+AGG 0.209854 3_1:+69491611 Msa0371320:CDS
GGTGACTTGATTGCTGCTTC+TGG 0.228441 3_1:+69491209 Msa0371320:CDS
TTTCTTGCTTTGGCCTTTCC+AGG 0.232502 3_1:-69493614 None:intergenic
TGGGGATTGATTGGGGTATT+GGG 0.233959 3_1:-69490450 None:intergenic
TTGGGGTATTGGGGAAATTA+GGG 0.244668 3_1:-69490440 None:intergenic
AATATTATATAATGGAAATT+TGG 0.269630 3_1:+69493900 Msa0371320:three_prime_UTR
ATGGGGATTGATTGGGGTAT+TGG 0.282722 3_1:-69490451 None:intergenic
ATAATATTCATTATGTAGTT+AGG 0.300349 3_1:-69493885 None:intergenic
AAATTTGGTCTGTTGTATTA+GGG 0.308221 3_1:+69493915 Msa0371320:three_prime_UTR
GATGGTGAAAGTGGTGATTT+TGG 0.309890 3_1:+69490753 Msa0371320:CDS
TTGTTGCTGGAGTAGGGTTT+TGG 0.316056 3_1:-69490486 None:intergenic
ACTTGTATTTATGTTTCAAT+TGG 0.328341 3_1:+69493992 Msa0371320:three_prime_UTR
GAGAAAGCGAAGGATGTAAG+AGG 0.337574 3_1:-69490400 None:intergenic
ACGGTGAAATGGGGATTGAT+TGG 0.341031 3_1:-69490459 None:intergenic
CGGTGAAATGGGGATTGATT+GGG 0.341338 3_1:-69490458 None:intergenic
GGGGATTGATTGGGGTATTG+GGG 0.348769 3_1:-69490449 None:intergenic
AGACAAAGACATTGGGGCTC+TGG 0.353840 3_1:+69491573 Msa0371320:CDS
CTAAGTGCAGGCCGCAAATC+TGG 0.366420 3_1:-69493404 None:intergenic
GAGCTCATTGCTGTTCTTGA+AGG 0.367151 3_1:+69490954 Msa0371320:CDS
AAAATGGTGGTTAGAAGAAA+AGG 0.368505 3_1:+69490668 Msa0371320:CDS
ACATAATGAATATTATATAA+TGG 0.370501 3_1:+69493892 Msa0371320:three_prime_UTR
TTCTCTGAGACAAAGACATT+GGG 0.370922 3_1:+69491566 Msa0371320:CDS
TTGAGTGTATGGAAGGATTT+CGG 0.378378 3_1:+69490534 Msa0371320:CDS
AAAGATCTTAAAGATGTTGA+TGG 0.382922 3_1:+69491269 Msa0371320:CDS
GAAGAAAGTGGAAATCTTGA+TGG 0.384461 3_1:+69490591 Msa0371320:CDS
CTCATAACAACACAAATCTA+AGG 0.386305 3_1:-69493812 None:intergenic
TAATCAATGTTTGGATTTCA+AGG 0.391609 3_1:+69493763 Msa0371320:three_prime_UTR
AGAGGATGATGATGTGAGTA+AGG 0.404212 3_1:+69490857 Msa0371320:CDS
CAAATCCACCAGAGGTGAAA+TGG 0.404466 3_1:+69491343 Msa0371320:CDS
ACCACTAACTCGTGAAGTTT+AGG 0.405877 3_1:+69490196 Msa0371320:five_prime_UTR
CTTGTATTTATGTTTCAATT+GGG 0.407559 3_1:+69493993 Msa0371320:three_prime_UTR
GTGAGACAAGTAGATGATAA+AGG 0.408119 3_1:+69491401 Msa0371320:CDS
ACAAAGATCCGTTGAGTGTA+TGG 0.409756 3_1:+69490523 Msa0371320:CDS
TGAAACACCACCGCCTTTCA+CGG 0.411906 3_1:-69491609 None:intergenic
GGCGACGTTGGCGGCGGCGT+AGG 0.413312 3_1:-69490239 None:intergenic
TGGAATTTGAAAGAGGATAC+TGG 0.418798 3_1:+69490816 Msa0371320:CDS
TTTGTTTAAAGGAATTGATA+AGG 0.420765 3_1:+69490716 Msa0371320:CDS
ATGTGATGTTAATCAATGTT+TGG 0.421479 3_1:+69493754 Msa0371320:three_prime_UTR
TAGCAGGGCTTTGCAAAGTT+GGG 0.438793 3_1:+69493379 Msa0371320:CDS
GCAAGTTGGAGCTATACGTT+TGG 0.439544 3_1:+69493352 Msa0371320:CDS
TAAACGCTCCATTTCACCTC+TGG 0.442301 3_1:-69491351 None:intergenic
ATGCGCTATGAGAGGAATAC+TGG 0.445921 3_1:+69491320 Msa0371320:CDS
GACAAAGACATTGGGGCTCT+GGG 0.446637 3_1:+69491574 Msa0371320:CDS
TTAGCAGGGCTTTGCAAAGT+TGG 0.453242 3_1:+69493378 Msa0371320:CDS
GTGAAGGAGGGGAGAGAGTG+AGG 0.453262 3_1:+69490625 Msa0371320:CDS
ACCTAAACTTCACGAGTTAG+TGG 0.461155 3_1:-69490197 None:intergenic
AAAGGACGTGCCTATGGAAC+CGG 0.464161 3_1:+69491419 Msa0371320:CDS
GGGATGAATGAAGGTGAAGG+AGG 0.464929 3_1:+69490612 Msa0371320:CDS
AGGAGGGGAGAGAGTGAGGA+AGG 0.465845 3_1:+69490629 Msa0371320:CDS
CTATACGTTTGGGTATTAGC+AGG 0.467402 3_1:+69493363 Msa0371320:CDS
TAGTGAGAAATGAGTGTTGC+CGG 0.469100 3_1:-69490275 None:intergenic
TATCTGCTCCAACACCAATA+TGG 0.469968 3_1:-69490779 None:intergenic
CAAGTTGGAGCTATACGTTT+GGG 0.473428 3_1:+69493353 Msa0371320:CDS
TTGTCTCAGAGAAAGGTCTA+AGG 0.474986 3_1:-69491556 None:intergenic
GGATGAATGAAGGTGAAGGA+GGG 0.475747 3_1:+69490613 Msa0371320:CDS
ACGCTCCATTTCACCTCTGG+TGG 0.482192 3_1:-69491348 None:intergenic
CCTCAAGATTTATGTAATGA+TGG 0.484702 3_1:-69494053 None:intergenic
GTTAGTGGTCCATTCCGATC+GGG 0.489676 3_1:-69490182 None:intergenic
ACTGCAGGAACGAAAGCTTT+TGG 0.489898 3_1:+69491188 Msa0371320:intron
CTACTCTTGAATCCCTTGTC+AGG 0.493764 3_1:-69493577 None:intergenic
GCTGACGGCGACGTTGGCGG+CGG 0.494831 3_1:-69490245 None:intergenic
GGTGAAATGGGGATTGATTG+GGG 0.495888 3_1:-69490457 None:intergenic
GATGATAAAGGACGTGCCTA+TGG 0.496476 3_1:+69491413 Msa0371320:CDS
TTTGGTGACCATATTGGTGT+TGG 0.496594 3_1:+69490771 Msa0371320:CDS
GCGTTTAAAGCAAGAGGAAG+CGG 0.500853 3_1:+69491367 Msa0371320:CDS
CAGATAATGTTGATGAACCT+TGG 0.500891 3_1:+69490796 Msa0371320:CDS
AATGTCTTTGTCTCAGAGAA+AGG 0.501501 3_1:-69491563 None:intergenic
AAATGGTGGTTAGAAGAAAA+GGG 0.502327 3_1:+69490669 Msa0371320:CDS
ACCATAAATTTACCGTTACC+AGG 0.502617 3_1:-69491479 None:intergenic
AGAAAGCGAAGGATGTAAGA+GGG 0.503734 3_1:-69490399 None:intergenic
GGGAATTAAACGAGAAAGCA+TGG 0.511823 3_1:-69490370 None:intergenic
TGAAGTTTAAGAAATTATTG+AGG 0.521773 3_1:-69493710 None:intergenic
TGAACCTTGGAATTTGAAAG+AGG 0.523153 3_1:+69490809 Msa0371320:CDS
TTTCTCTGAGACAAAGACAT+TGG 0.523584 3_1:+69491565 Msa0371320:CDS
GGGATTCAAGAGTAGTAGAA+AGG 0.524223 3_1:+69493585 Msa0371320:CDS
GTATCCTCTTTCAAATTCCA+AGG 0.528823 3_1:-69490813 None:intergenic
TTCATACCACTTCTAAGTGC+AGG 0.531151 3_1:-69493416 None:intergenic
AAATTATTCGATGAAGAAAG+TGG 0.531395 3_1:+69490579 Msa0371320:CDS
TTCATGACAATAGGGCAAGT+TGG 0.534750 3_1:+69493338 Msa0371320:intron
AAAGCTGACGGCGACGTTGG+CGG 0.538561 3_1:-69490248 None:intergenic
GATGTTAATTGTACCGTGAA+AGG 0.538780 3_1:+69491596 Msa0371320:CDS
AAGGAAACTGAGGTTAAAGA+TGG 0.540127 3_1:+69490735 Msa0371320:CDS
GATCAGTCGGCTTCCTGACA+AGG 0.540941 3_1:+69493564 Msa0371320:intron
TTCTCACTATCACAACGAAA+AGG 0.543881 3_1:+69490289 Msa0371320:five_prime_UTR
GAGAAAGCTGACGGCGACGT+TGG 0.546059 3_1:-69490251 None:intergenic
ACGTTGGCGGCGGCGTAGGA+AGG 0.552089 3_1:-69490235 None:intergenic
TAGCACGATGATCGAGCATA+GGG 0.554600 3_1:-69491529 None:intergenic
TTCTGAACCTCCTCTTGACT+CGG 0.562611 3_1:-69490912 None:intergenic
TATACGTTTGGGTATTAGCA+GGG 0.565628 3_1:+69493364 Msa0371320:CDS
GGGTATTGATAATGAAGAAG+AGG 0.566295 3_1:+69490689 Msa0371320:CDS
GCACAAGTCCCCGATCGGAA+TGG 0.567833 3_1:+69490173 Msa0371320:five_prime_UTR
GCACGTGTGTGGGTTCAGCC+TGG 0.568099 3_1:+69491461 Msa0371320:CDS
TGGTGAGCTTAATGTTGTCG+AGG 0.568877 3_1:+69490887 Msa0371320:CDS
GGATGATGATGTGAGTAAGG+AGG 0.571155 3_1:+69490860 Msa0371320:CDS
TAAACTCTCAAGCATTTCGT+CGG 0.573331 3_1:-69491237 None:intergenic
GTAGCACGATGATCGAGCAT+AGG 0.575752 3_1:-69491530 None:intergenic
GATGAATGAAGGTGAAGGAG+GGG 0.576275 3_1:+69490614 Msa0371320:CDS
AATCTTGATGGGATGAATGA+AGG 0.577942 3_1:+69490603 Msa0371320:CDS
GTGTGGGTTCAGCCTGGTAA+CGG 0.579940 3_1:+69491467 Msa0371320:CDS
AGGAATTGATAAGGAAACTG+AGG 0.581256 3_1:+69490725 Msa0371320:CDS
TTGCGGCCTGCACTTAGAAG+TGG 0.583652 3_1:+69493410 Msa0371320:CDS
GAGGTTAAAGATGGTGAAAG+TGG 0.584687 3_1:+69490744 Msa0371320:CDS
AATGCAGTATAGCACGTGTG+TGG 0.584778 3_1:+69491450 Msa0371320:CDS
AAGATCTTAAAGATGTTGAT+GGG 0.585151 3_1:+69491270 Msa0371320:CDS
AATTGTACCGTGAAAGGCGG+TGG 0.586653 3_1:+69491602 Msa0371320:CDS
AAAGTTGGGAACCAGATTTG+CGG 0.586970 3_1:+69493393 Msa0371320:CDS
TGATGATGTGAGTAAGGAGG+AGG 0.588163 3_1:+69490863 Msa0371320:CDS
AGATCCGTTGAGTGTATGGA+AGG 0.589095 3_1:+69490527 Msa0371320:CDS
GGTGAGCTTAATGTTGTCGA+GGG 0.589292 3_1:+69490888 Msa0371320:CDS
ATCAGTCGGCTTCCTGACAA+GGG 0.591884 3_1:+69493565 Msa0371320:intron
ATGGAAGAGAGAGAAAGCGA+AGG 0.602824 3_1:-69490410 None:intergenic
TTTGTGCACAAGTCCCCGAT+CGG 0.604160 3_1:+69490168 Msa0371320:five_prime_UTR
GTCGCCGTCAGCTTTCTCTC+CGG 0.604644 3_1:+69490256 Msa0371320:five_prime_UTR
GGAGGTTCAGAAGCTTGAGA+AGG 0.611036 3_1:+69490923 Msa0371320:CDS
ATGCAGTATAGCACGTGTGT+GGG 0.611437 3_1:+69491451 Msa0371320:CDS
AAGAAAGTGGAAATCTTGAT+GGG 0.619055 3_1:+69490592 Msa0371320:CDS
AAATCCTTCCATACACTCAA+CGG 0.620817 3_1:-69490531 None:intergenic
AGTTAGTGGTCCATTCCGAT+CGG 0.627215 3_1:-69490183 None:intergenic
GAAGGATTTCGGAGAAACAG+AGG 0.628489 3_1:+69490545 Msa0371320:CDS
CGAGGGTCCGAGTCAAGAGG+AGG 0.644556 3_1:+69490905 Msa0371320:CDS
AATGGAGCGTTTAAAGCAAG+AGG 0.646020 3_1:+69491361 Msa0371320:CDS
GATGTGAGTAAGGAGGAGGT+TGG 0.653294 3_1:+69490867 Msa0371320:CDS
TCTCTGAGACAAAGACATTG+GGG 0.653728 3_1:+69491567 Msa0371320:CDS
CCATCATTACATAAATCTTG+AGG 0.655184 3_1:+69494053 Msa0371320:three_prime_UTR
TTAGTGGTCCATTCCGATCG+GGG 0.657655 3_1:-69490181 None:intergenic
TGTCGAGGGTCCGAGTCAAG+AGG 0.658139 3_1:+69490902 Msa0371320:CDS
GTTGCCGGAGAGAAAGCTGA+CGG 0.666218 3_1:-69490260 None:intergenic
GTTAATTGTACCGTGAAAGG+CGG 0.669146 3_1:+69491599 Msa0371320:CDS
GATGGGATGAATGAAGGTGA+AGG 0.675149 3_1:+69490609 Msa0371320:CDS
GACGTGCCTATGGAACCGGA+AGG 0.727860 3_1:+69491423 Msa0371320:CDS
AATACTGGCAAATCCACCAG+AGG 0.729786 3_1:+69491335 Msa0371320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATTGAATATATTTTTTT+AGG + chr3_1:69491710-69491729 Msa0371320:intron 10.0%
!! ACATAATGAATATTATATAA+TGG + chr3_1:69493892-69493911 Msa0371320:three_prime_UTR 10.0%
!!! AATATTATATAATGGAAATT+TGG + chr3_1:69493900-69493919 Msa0371320:three_prime_UTR 10.0%
!!! TTTCTTTTTAGTTAAATAAA+AGG + chr3_1:69494028-69494047 Msa0371320:three_prime_UTR 10.0%
!! TAACTTATTAAGCATTTATA+TGG + chr3_1:69492360-69492379 Msa0371320:intron 15.0%
!!! TTCATTTTTAAAATAAAAGC+AGG - chr3_1:69492814-69492833 None:intergenic 15.0%
!! ATTTGAAAAATATACTCTTA+AGG + chr3_1:69493049-69493068 Msa0371320:intron 15.0%
!! TTTAAATATCAAAATTAGAG+AGG - chr3_1:69493133-69493152 None:intergenic 15.0%
!! ATAATATTCATTATGTAGTT+AGG - chr3_1:69493888-69493907 None:intergenic 15.0%
!! TTTGTTTAAAGGAATTGATA+AGG + chr3_1:69490716-69490735 Msa0371320:CDS 20.0%
!! ATAACTAGAAAAATCTTCAA+CGG - chr3_1:69491065-69491084 None:intergenic 20.0%
!!! ATTTTTTCTATTTCACTAAG+AGG - chr3_1:69491302-69491321 None:intergenic 20.0%
!! AAGAAATTTATGCTAATGAT+AGG - chr3_1:69491689-69491708 None:intergenic 20.0%
!!! TTTTGTACTAAATAGTGTAT+TGG + chr3_1:69491862-69491881 Msa0371320:intron 20.0%
!! ATGAAAAATGAAAGAGATAA+AGG - chr3_1:69492716-69492735 None:intergenic 20.0%
!!! TATCTCTTTCATTTTTCATA+TGG + chr3_1:69492717-69492736 Msa0371320:intron 20.0%
!!! TTAATTTACTTGACAGTTTT+TGG + chr3_1:69493082-69493101 Msa0371320:intron 20.0%
!!! ACAGTTTTTGGTTTTATTTA+GGG + chr3_1:69493094-69493113 Msa0371320:intron 20.0%
!! TCTCTTTATTATTTGATTGT+TGG - chr3_1:69493205-69493224 None:intergenic 20.0%
!! TAAAAGACTAACATGAAAAA+AGG - chr3_1:69493478-69493497 None:intergenic 20.0%
!! TGAAGTTTAAGAAATTATTG+AGG - chr3_1:69493713-69493732 None:intergenic 20.0%
!!! GTGTAGTTATTATTTGTTTT+TGG + chr3_1:69493966-69493985 Msa0371320:three_prime_UTR 20.0%
!! ACTTGTATTTATGTTTCAAT+TGG + chr3_1:69493992-69494011 Msa0371320:three_prime_UTR 20.0%
!! CTTGTATTTATGTTTCAATT+GGG + chr3_1:69493993-69494012 Msa0371320:three_prime_UTR 20.0%
! AAATTATTCGATGAAGAAAG+TGG + chr3_1:69490579-69490598 Msa0371320:CDS 25.0%
!!! AAGTTGATGATGAACAAAAA+TGG + chr3_1:69490652-69490671 Msa0371320:CDS 25.0%
! ATAACAAACTAACAACAGAA+GGG - chr3_1:69490992-69491011 None:intergenic 25.0%
! AATAACAAACTAACAACAGA+AGG - chr3_1:69490993-69491012 None:intergenic 25.0%
!!! TTAGTTTTAGACATTGTTGA+AGG + chr3_1:69491015-69491034 Msa0371320:intron 25.0%
! ATGAAACTGAATTATTGTCA+AGG + chr3_1:69491135-69491154 Msa0371320:intron 25.0%
! AAAGATCTTAAAGATGTTGA+TGG + chr3_1:69491269-69491288 Msa0371320:CDS 25.0%
! AAGATCTTAAAGATGTTGAT+GGG + chr3_1:69491270-69491289 Msa0371320:CDS 25.0%
!! TACTTTGGTAATTTGAGTTT+GGG + chr3_1:69491742-69491761 Msa0371320:intron 25.0%
! TACAAAACATTGTCAAATTG+CGG - chr3_1:69491849-69491868 None:intergenic 25.0%
!! TAAACCAGTGTTGTTAAATA+GGG - chr3_1:69491950-69491969 None:intergenic 25.0%
!!! TATTTAACAACACTGGTTTA+GGG + chr3_1:69491950-69491969 Msa0371320:intron 25.0%
!! CCTATGTTTTTCTTATTCAT+TGG - chr3_1:69492271-69492290 None:intergenic 25.0%
! CCAATGAATAAGAAAAACAT+AGG + chr3_1:69492268-69492287 Msa0371320:intron 25.0%
! AATAAGAAAAACATAGGAGA+GGG + chr3_1:69492274-69492293 Msa0371320:intron 25.0%
!!! TCTAAGACTAGTTTTTTTGT+TGG - chr3_1:69492443-69492462 None:intergenic 25.0%
!!! AGTACAGTTTTTAAGAACTA+AGG + chr3_1:69492527-69492546 Msa0371320:intron 25.0%
! AAAAATGAAAGTTCAGCATA+TGG - chr3_1:69492625-69492644 None:intergenic 25.0%
! ATTATTCACAACCAATGTAT+GGG - chr3_1:69492652-69492671 None:intergenic 25.0%
! AATTATTCACAACCAATGTA+TGG - chr3_1:69492653-69492672 None:intergenic 25.0%
! AAATACAGGTTTCATTAGTT+CGG - chr3_1:69492874-69492893 None:intergenic 25.0%
!!! AGCTTTCTTTTATTTTGATC+AGG + chr3_1:69492937-69492956 Msa0371320:intron 25.0%
! CATGTAAATGGAAGATATAA+GGG + chr3_1:69492969-69492988 Msa0371320:intron 25.0%
!!! GACAGTTTTTGGTTTTATTT+AGG + chr3_1:69493093-69493112 Msa0371320:intron 25.0%
! CTTTATTATTTGATTGTTGG+TGG - chr3_1:69493202-69493221 None:intergenic 25.0%
! GTTGATTAAGATAATACGAA+GGG - chr3_1:69493309-69493328 None:intergenic 25.0%
!!! TTGAAAACTTTTTCTTGCTT+TGG - chr3_1:69493627-69493646 None:intergenic 25.0%
!! AAGCAAGAAAAAGTTTTCAA+TGG + chr3_1:69493627-69493646 Msa0371320:CDS 25.0%
!! AGCAAGAAAAAGTTTTCAAT+GGG + chr3_1:69493628-69493647 Msa0371320:CDS 25.0%
!!! GCATTTTTTGTTTGGAATTT+CGG + chr3_1:69493683-69493702 Msa0371320:three_prime_UTR 25.0%
! ATGTGATGTTAATCAATGTT+TGG + chr3_1:69493754-69493773 Msa0371320:three_prime_UTR 25.0%
! TAATCAATGTTTGGATTTCA+AGG + chr3_1:69493763-69493782 Msa0371320:three_prime_UTR 25.0%
! AAATTTGGTCTGTTGTATTA+GGG + chr3_1:69493915-69493934 Msa0371320:three_prime_UTR 25.0%
!! TTTTGGAAAAACGGTGAAAT+GGG - chr3_1:69490472-69490491 None:intergenic 30.0%
!!! GTTATTGTTTTTGTTGTTGC+TGG - chr3_1:69490502-69490521 None:intergenic 30.0%
AAGAAAGTGGAAATCTTGAT+GGG + chr3_1:69490592-69490611 Msa0371320:CDS 30.0%
!! TTGATGATGAACAAAAATGG+TGG + chr3_1:69490655-69490674 Msa0371320:CDS 30.0%
AAAATGGTGGTTAGAAGAAA+AGG + chr3_1:69490668-69490687 Msa0371320:CDS 30.0%
AAATGGTGGTTAGAAGAAAA+GGG + chr3_1:69490669-69490688 Msa0371320:CDS 30.0%
!!! TGATGTTTTTGGTTTCAAAG+AGG + chr3_1:69490839-69490858 Msa0371320:CDS 30.0%
TAACAAACTAACAACAGAAG+GGG - chr3_1:69490991-69491010 None:intergenic 30.0%
TTTAGACATTGTTGAAGGTT+TGG + chr3_1:69491020-69491039 Msa0371320:intron 30.0%
ATTTGAATGTGAAAGCTGAA+TGG + chr3_1:69491086-69491105 Msa0371320:intron 30.0%
! TTTTCTATTTCACTAAGAGG+TGG - chr3_1:69491299-69491318 None:intergenic 30.0%
CAAACTCAAATTACCAAAGT+AGG - chr3_1:69491743-69491762 None:intergenic 30.0%
! CTACTTTGGTAATTTGAGTT+TGG + chr3_1:69491741-69491760 Msa0371320:intron 30.0%
! ACTTTGGTAATTTGAGTTTG+GGG + chr3_1:69491743-69491762 Msa0371320:intron 30.0%
TTGTTAAATAGGGGTTATAG+CGG - chr3_1:69491940-69491959 None:intergenic 30.0%
! AAACCAGTGTTGTTAAATAG+GGG - chr3_1:69491949-69491968 None:intergenic 30.0%
! CTAAACCAGTGTTGTTAAAT+AGG - chr3_1:69491951-69491970 None:intergenic 30.0%
!! CTATTTAACAACACTGGTTT+AGG + chr3_1:69491949-69491968 Msa0371320:intron 30.0%
! ATTTTGTACTGTATCATGCA+TGG - chr3_1:69492046-69492065 None:intergenic 30.0%
ATGCATGATACAGTACAAAA+TGG + chr3_1:69492045-69492064 Msa0371320:intron 30.0%
CAAGTATTTGCTTAAGAGAT+TGG + chr3_1:69492184-69492203 Msa0371320:intron 30.0%
GAATAAGAAAAACATAGGAG+AGG + chr3_1:69492273-69492292 Msa0371320:intron 30.0%
ATAAGAAAAACATAGGAGAG+GGG + chr3_1:69492275-69492294 Msa0371320:intron 30.0%
ACACAGTTCTTCAAAGTAAA+CGG - chr3_1:69492555-69492574 None:intergenic 30.0%
TTATTCACAACCAATGTATG+GGG - chr3_1:69492651-69492670 None:intergenic 30.0%
! ACATTGGTTGTGAATAATTG+TGG + chr3_1:69492654-69492673 Msa0371320:intron 30.0%
AAAAGTAGCTCACTTATTCT+TGG - chr3_1:69492767-69492786 None:intergenic 30.0%
TAAAACGATTGAAGTAAACG+AGG + chr3_1:69492838-69492857 Msa0371320:intron 30.0%
TATTCTAGCATGACAAATAC+AGG - chr3_1:69492888-69492907 None:intergenic 30.0%
ATTCATGAATGATATCGCAA+AGG - chr3_1:69492913-69492932 None:intergenic 30.0%
GCATGTAAATGGAAGATATA+AGG + chr3_1:69492968-69492987 Msa0371320:intron 30.0%
GGGAGAAAATATTTATGAAC+TGG + chr3_1:69492989-69493008 Msa0371320:intron 30.0%
ATACGAAGGGAAAAATGAAT+TGG - chr3_1:69493296-69493315 None:intergenic 30.0%
! CGTTGATTAAGATAATACGA+AGG - chr3_1:69493310-69493329 None:intergenic 30.0%
AAACCTGTTTCATGACAATA+GGG + chr3_1:69493330-69493349 Msa0371320:intron 30.0%
AGTTTAGTGATTCATCAATG+CGG - chr3_1:69493527-69493546 None:intergenic 30.0%
!!! GTTAAAAGAGCATCATTTTC+TGG + chr3_1:69493657-69493676 Msa0371320:exon 30.0%
CTCATAACAACACAAATCTA+AGG - chr3_1:69493815-69493834 None:intergenic 30.0%
GAAATTTGGTCTGTTGTATT+AGG + chr3_1:69493914-69493933 Msa0371320:three_prime_UTR 30.0%
CTACACAAAAATAAGCAGAA+TGG - chr3_1:69493952-69493971 None:intergenic 30.0%
CCTCAAGATTTATGTAATGA+TGG - chr3_1:69494056-69494075 None:intergenic 30.0%
CCATCATTACATAAATCTTG+AGG + chr3_1:69494053-69494072 Msa0371320:three_prime_UTR 30.0%
TTCTCACTATCACAACGAAA+AGG + chr3_1:69490289-69490308 Msa0371320:five_prime_UTR 35.0%
!!! AGGATGTAAGAGGGTTTTTT+GGG - chr3_1:69490393-69490412 None:intergenic 35.0%
!!! AAGGATGTAAGAGGGTTTTT+TGG - chr3_1:69490394-69490413 None:intergenic 35.0%
! ATTGGGGAAATTAGGGTTTT+TGG - chr3_1:69490436-69490455 None:intergenic 35.0%
TTTGGAAAAACGGTGAAATG+GGG - chr3_1:69490471-69490490 None:intergenic 35.0%
!!! GTTTTGGAAAAACGGTGAAA+TGG - chr3_1:69490473-69490492 None:intergenic 35.0%
!!! TTTTTGTTGTTGCTGGAGTA+GGG - chr3_1:69490495-69490514 None:intergenic 35.0%
AAATCCTTCCATACACTCAA+CGG - chr3_1:69490534-69490553 None:intergenic 35.0%
TTGAGTGTATGGAAGGATTT+CGG + chr3_1:69490534-69490553 Msa0371320:CDS 35.0%
GAAGAAAGTGGAAATCTTGA+TGG + chr3_1:69490591-69490610 Msa0371320:CDS 35.0%
AATCTTGATGGGATGAATGA+AGG + chr3_1:69490603-69490622 Msa0371320:CDS 35.0%
!! GGGTATTGATAATGAAGAAG+AGG + chr3_1:69490689-69490708 Msa0371320:CDS 35.0%
!! GAAGAGGATGCTTTGTTTAA+AGG + chr3_1:69490705-69490724 Msa0371320:CDS 35.0%
AGGAATTGATAAGGAAACTG+AGG + chr3_1:69490725-69490744 Msa0371320:CDS 35.0%
AAGGAAACTGAGGTTAAAGA+TGG + chr3_1:69490735-69490754 Msa0371320:CDS 35.0%
! CAGATAATGTTGATGAACCT+TGG + chr3_1:69490796-69490815 Msa0371320:CDS 35.0%
TGAACCTTGGAATTTGAAAG+AGG + chr3_1:69490809-69490828 Msa0371320:CDS 35.0%
GTATCCTCTTTCAAATTCCA+AGG - chr3_1:69490816-69490835 None:intergenic 35.0%
TGGAATTTGAAAGAGGATAC+TGG + chr3_1:69490816-69490835 Msa0371320:CDS 35.0%
GAAAGCTGAATGGAATTGAA+AGG + chr3_1:69491096-69491115 Msa0371320:intron 35.0%
!! AATGGAATTGAAAGGTGTTG+CGG + chr3_1:69491104-69491123 Msa0371320:intron 35.0%
! TTTTACTGTATTGTGACTGC+AGG + chr3_1:69491173-69491192 Msa0371320:intron 35.0%
TAAACTCTCAAGCATTTCGT+CGG - chr3_1:69491240-69491259 None:intergenic 35.0%
TAGAAAAAATGCGCTATGAG+AGG + chr3_1:69491312-69491331 Msa0371320:CDS 35.0%
GTGAGACAAGTAGATGATAA+AGG + chr3_1:69491401-69491420 Msa0371320:CDS 35.0%
! TATACTGCATTTTCTCCTTC+CGG - chr3_1:69491441-69491460 None:intergenic 35.0%
ACCATAAATTTACCGTTACC+AGG - chr3_1:69491482-69491501 None:intergenic 35.0%
AATGTCTTTGTCTCAGAGAA+AGG - chr3_1:69491566-69491585 None:intergenic 35.0%
!! TTTCTCTGAGACAAAGACAT+TGG + chr3_1:69491565-69491584 Msa0371320:CDS 35.0%
!! TTCTCTGAGACAAAGACATT+GGG + chr3_1:69491566-69491585 Msa0371320:CDS 35.0%
GATGTTAATTGTACCGTGAA+AGG + chr3_1:69491596-69491615 Msa0371320:CDS 35.0%
TATGCTAATGATAGGACTTC+AGG - chr3_1:69491681-69491700 None:intergenic 35.0%
! TTTAGGATGAATGCCTACTT+TGG + chr3_1:69491727-69491746 Msa0371320:intron 35.0%
TGTTAAATAGGGGTTATAGC+GGG - chr3_1:69491939-69491958 None:intergenic 35.0%
TAACCCCTATTTAACAACAC+TGG + chr3_1:69491943-69491962 Msa0371320:intron 35.0%
CAGTGAATCTACACATACAT+GGG - chr3_1:69492132-69492151 None:intergenic 35.0%
ATACTTGTCTGATGTATGCT+TGG - chr3_1:69492171-69492190 None:intergenic 35.0%
TAAGAAAAACATAGGAGAGG+GGG + chr3_1:69492276-69492295 Msa0371320:intron 35.0%
CACAGTTCTTCAAAGTAAAC+GGG - chr3_1:69492554-69492573 None:intergenic 35.0%
AATGAAAGTTCAGCATATGG+TGG - chr3_1:69492622-69492641 None:intergenic 35.0%
! CATTTTTCTACCCCATACAT+TGG + chr3_1:69492638-69492657 Msa0371320:intron 35.0%
TTGGTTGTGAATAATTGTGG+TGG + chr3_1:69492657-69492676 Msa0371320:intron 35.0%
TGTGAATAATTGTGGTGGTT+TGG + chr3_1:69492662-69492681 Msa0371320:intron 35.0%
AGGAAGACTATGCATGTAAA+TGG + chr3_1:69492957-69492976 Msa0371320:intron 35.0%
GTTGAATATAAGCGCGTATT+TGG - chr3_1:69493177-69493196 None:intergenic 35.0%
AGAGCATGCATAACAGAAAT+TGG + chr3_1:69493222-69493241 Msa0371320:intron 35.0%
GAAACCTGTTTCATGACAAT+AGG + chr3_1:69493329-69493348 Msa0371320:intron 35.0%
TATACGTTTGGGTATTAGCA+GGG + chr3_1:69493364-69493383 Msa0371320:CDS 35.0%
!!! TCATGTTAGTCTTTTACTCG+TGG + chr3_1:69493482-69493501 Msa0371320:intron 35.0%
TGTCCTCAAAATTGATCAGT+CGG + chr3_1:69493551-69493570 Msa0371320:intron 35.0%
GTAGTAGAAAGGAAAAAACC+TGG + chr3_1:69493596-69493615 Msa0371320:CDS 35.0%
AGAAAGGAAAAAACCTGGAA+AGG + chr3_1:69493601-69493620 Msa0371320:CDS 35.0%
!!! AAAGAGCATCATTTTCTGGA+TGG + chr3_1:69493661-69493680 Msa0371320:exon 35.0%
!!! TCTGGATGGCATTTTTTGTT+TGG + chr3_1:69493675-69493694 Msa0371320:three_prime_UTR 35.0%
! TATGAGTCATTCACGCTTTT+TGG + chr3_1:69493829-69493848 Msa0371320:three_prime_UTR 35.0%
ACCACTAACTCGTGAAGTTT+AGG + chr3_1:69490196-69490215 Msa0371320:five_prime_UTR 40.0%
ACCTAAACTTCACGAGTTAG+TGG - chr3_1:69490200-69490219 None:intergenic 40.0%
! TAGTGAGAAATGAGTGTTGC+CGG - chr3_1:69490278-69490297 None:intergenic 40.0%
GGGAATTAAACGAGAAAGCA+TGG - chr3_1:69490373-69490392 None:intergenic 40.0%
AGAAAGCGAAGGATGTAAGA+GGG - chr3_1:69490402-69490421 None:intergenic 40.0%
!! GGGAAATTAGGGTTTTTGGA+TGG - chr3_1:69490432-69490451 None:intergenic 40.0%
!! TTGGGGTATTGGGGAAATTA+GGG - chr3_1:69490443-69490462 None:intergenic 40.0%
!! ATTGGGGTATTGGGGAAATT+AGG - chr3_1:69490444-69490463 None:intergenic 40.0%
!!! GGAGTAGGGTTTTGGAAAAA+CGG - chr3_1:69490481-69490500 None:intergenic 40.0%
!!! GTTTTTGTTGTTGCTGGAGT+AGG - chr3_1:69490496-69490515 None:intergenic 40.0%
ACAAAGATCCGTTGAGTGTA+TGG + chr3_1:69490523-69490542 Msa0371320:CDS 40.0%
GAGGTTAAAGATGGTGAAAG+TGG + chr3_1:69490744-69490763 Msa0371320:CDS 40.0%
! GATGGTGAAAGTGGTGATTT+TGG + chr3_1:69490753-69490772 Msa0371320:CDS 40.0%
!! GGTGATTTTGGTGACCATAT+TGG + chr3_1:69490765-69490784 Msa0371320:CDS 40.0%
! TTTGGTGACCATATTGGTGT+TGG + chr3_1:69490771-69490790 Msa0371320:CDS 40.0%
TATCTGCTCCAACACCAATA+TGG - chr3_1:69490782-69490801 None:intergenic 40.0%
!! GAGGATACTGGTGATGTTTT+TGG + chr3_1:69490828-69490847 Msa0371320:CDS 40.0%
! AGAGGATGATGATGTGAGTA+AGG + chr3_1:69490857-69490876 Msa0371320:CDS 40.0%
! CATTGCTGTTCTTGAAGGTT+TGG + chr3_1:69490959-69490978 Msa0371320:intron 40.0%
! AATGGAGCGTTTAAAGCAAG+AGG + chr3_1:69491361-69491380 Msa0371320:CDS 40.0%
!! GCCTGGTAACGGTAAATTTA+TGG + chr3_1:69491478-69491497 Msa0371320:CDS 40.0%
TTGTCTCAGAGAAAGGTCTA+AGG - chr3_1:69491559-69491578 None:intergenic 40.0%
!! TCTCTGAGACAAAGACATTG+GGG + chr3_1:69491567-69491586 Msa0371320:CDS 40.0%
GTTAATTGTACCGTGAAAGG+CGG + chr3_1:69491599-69491618 Msa0371320:CDS 40.0%
GTTAAATAGGGGTTATAGCG+GGG - chr3_1:69491938-69491957 None:intergenic 40.0%
!! AACAACACTGGTTTAGGGTA+TGG + chr3_1:69491955-69491974 Msa0371320:intron 40.0%
CATGCATGTTTGACACTCAA+AGG + chr3_1:69492068-69492087 Msa0371320:intron 40.0%
TGAATCTACACATACATGGG+TGG - chr3_1:69492129-69492148 None:intergenic 40.0%
CCAGTGAATCTACACATACA+TGG - chr3_1:69492133-69492152 None:intergenic 40.0%
CCATGTATGTGTAGATTCAC+TGG + chr3_1:69492130-69492149 Msa0371320:intron 40.0%
GTATGTGTAGATTCACTGGT+TGG + chr3_1:69492134-69492153 Msa0371320:intron 40.0%
GGGTTAGAGTTAGAGACTAT+AGG + chr3_1:69492303-69492322 Msa0371320:intron 40.0%
TAGAGTTAGAGACTATAGGC+AGG + chr3_1:69492307-69492326 Msa0371320:intron 40.0%
AGAGTTAGAGACTATAGGCA+GGG + chr3_1:69492308-69492327 Msa0371320:intron 40.0%
AATGATCCAGATGCATCTCT+TGG + chr3_1:69492467-69492486 Msa0371320:intron 40.0%
AAAAGACCAAGAGATGCATC+TGG - chr3_1:69492476-69492495 None:intergenic 40.0%
!!! GTGAGCTACTTTTCTTCATG+TGG + chr3_1:69492774-69492793 Msa0371320:intron 40.0%
TTCATGTGGCATGATCAGTT+TGG + chr3_1:69492788-69492807 Msa0371320:intron 40.0%
TTGCCCTATTGTCATGAAAC+AGG - chr3_1:69493336-69493355 None:intergenic 40.0%
TTCATGACAATAGGGCAAGT+TGG + chr3_1:69493338-69493357 Msa0371320:intron 40.0%
! CAAGTTGGAGCTATACGTTT+GGG + chr3_1:69493353-69493372 Msa0371320:CDS 40.0%
CTATACGTTTGGGTATTAGC+AGG + chr3_1:69493363-69493382 Msa0371320:CDS 40.0%
AAAGTTGGGAACCAGATTTG+CGG + chr3_1:69493393-69493412 Msa0371320:CDS 40.0%
TTCATACCACTTCTAAGTGC+AGG - chr3_1:69493419-69493438 None:intergenic 40.0%
! AAGCCGACTGATCAATTTTG+AGG - chr3_1:69493557-69493576 None:intergenic 40.0%
GGGATTCAAGAGTAGTAGAA+AGG + chr3_1:69493585-69493604 Msa0371320:CDS 40.0%
AGTTAGTGGTCCATTCCGAT+CGG - chr3_1:69490186-69490205 None:intergenic 45.0%
GAGAAAGCGAAGGATGTAAG+AGG - chr3_1:69490403-69490422 None:intergenic 45.0%
ATGGAAGAGAGAGAAAGCGA+AGG - chr3_1:69490413-69490432 None:intergenic 45.0%
! TGGGGATTGATTGGGGTATT+GGG - chr3_1:69490453-69490472 None:intergenic 45.0%
ATGGGGATTGATTGGGGTAT+TGG - chr3_1:69490454-69490473 None:intergenic 45.0%
GGTGAAATGGGGATTGATTG+GGG - chr3_1:69490460-69490479 None:intergenic 45.0%
CGGTGAAATGGGGATTGATT+GGG - chr3_1:69490461-69490480 None:intergenic 45.0%
ACGGTGAAATGGGGATTGAT+TGG - chr3_1:69490462-69490481 None:intergenic 45.0%
! TTGTTGCTGGAGTAGGGTTT+TGG - chr3_1:69490489-69490508 None:intergenic 45.0%
AGATCCGTTGAGTGTATGGA+AGG + chr3_1:69490527-69490546 Msa0371320:CDS 45.0%
GAAGGATTTCGGAGAAACAG+AGG + chr3_1:69490545-69490564 Msa0371320:CDS 45.0%
GATGGGATGAATGAAGGTGA+AGG + chr3_1:69490609-69490628 Msa0371320:CDS 45.0%
GGATGAATGAAGGTGAAGGA+GGG + chr3_1:69490613-69490632 Msa0371320:CDS 45.0%
GATGAATGAAGGTGAAGGAG+GGG + chr3_1:69490614-69490633 Msa0371320:CDS 45.0%
! GGATGATGATGTGAGTAAGG+AGG + chr3_1:69490860-69490879 Msa0371320:CDS 45.0%
! TGATGATGTGAGTAAGGAGG+AGG + chr3_1:69490863-69490882 Msa0371320:CDS 45.0%
TGGTGAGCTTAATGTTGTCG+AGG + chr3_1:69490887-69490906 Msa0371320:CDS 45.0%
GGTGAGCTTAATGTTGTCGA+GGG + chr3_1:69490888-69490907 Msa0371320:CDS 45.0%
TTCTGAACCTCCTCTTGACT+CGG - chr3_1:69490915-69490934 None:intergenic 45.0%
! GAGCTCATTGCTGTTCTTGA+AGG + chr3_1:69490954-69490973 Msa0371320:CDS 45.0%
! ACTGCAGGAACGAAAGCTTT+TGG + chr3_1:69491188-69491207 Msa0371320:intron 45.0%
ATGCGCTATGAGAGGAATAC+TGG + chr3_1:69491320-69491339 Msa0371320:CDS 45.0%
AATACTGGCAAATCCACCAG+AGG + chr3_1:69491335-69491354 Msa0371320:CDS 45.0%
CAAATCCACCAGAGGTGAAA+TGG + chr3_1:69491343-69491362 Msa0371320:CDS 45.0%
TAAACGCTCCATTTCACCTC+TGG - chr3_1:69491354-69491373 None:intergenic 45.0%
! GCGTTTAAAGCAAGAGGAAG+CGG + chr3_1:69491367-69491386 Msa0371320:CDS 45.0%
GATGATAAAGGACGTGCCTA+TGG + chr3_1:69491413-69491432 Msa0371320:CDS 45.0%
! TTTTCTCCTTCCGGTTCCAT+AGG - chr3_1:69491432-69491451 None:intergenic 45.0%
AATGCAGTATAGCACGTGTG+TGG + chr3_1:69491450-69491469 Msa0371320:CDS 45.0%
ATGCAGTATAGCACGTGTGT+GGG + chr3_1:69491451-69491470 Msa0371320:CDS 45.0%
TAGCACGATGATCGAGCATA+GGG - chr3_1:69491532-69491551 None:intergenic 45.0%
GCTATAGCACTGTTGAGTAG+CGG - chr3_1:69491816-69491835 None:intergenic 45.0%
GCTACTCAACAGTGCTATAG+CGG + chr3_1:69491815-69491834 Msa0371320:intron 45.0%
CATAGTGCATGCTACTCTTC+AGG + chr3_1:69492014-69492033 Msa0371320:intron 45.0%
AGAGACTATAGGCAGGGTAA+CGG + chr3_1:69492314-69492333 Msa0371320:intron 45.0%
TGCTCATTGTGATGCTTGCA+AGG + chr3_1:69492741-69492760 Msa0371320:intron 45.0%
! GCAAGTTGGAGCTATACGTT+TGG + chr3_1:69493352-69493371 Msa0371320:CDS 45.0%
TTAGCAGGGCTTTGCAAAGT+TGG + chr3_1:69493378-69493397 Msa0371320:CDS 45.0%
TAGCAGGGCTTTGCAAAGTT+GGG + chr3_1:69493379-69493398 Msa0371320:CDS 45.0%
CTACTCTTGAATCCCTTGTC+AGG - chr3_1:69493580-69493599 None:intergenic 45.0%
! TTTCTTGCTTTGGCCTTTCC+AGG - chr3_1:69493617-69493636 None:intergenic 45.0%
TTTGTGCACAAGTCCCCGAT+CGG + chr3_1:69490168-69490187 Msa0371320:five_prime_UTR 50.0%
TTAGTGGTCCATTCCGATCG+GGG - chr3_1:69490184-69490203 None:intergenic 50.0%
GTTAGTGGTCCATTCCGATC+GGG - chr3_1:69490185-69490204 None:intergenic 50.0%
!! GGGGATTGATTGGGGTATTG+GGG - chr3_1:69490452-69490471 None:intergenic 50.0%
GGGATGAATGAAGGTGAAGG+AGG + chr3_1:69490612-69490631 Msa0371320:CDS 50.0%
GATGTGAGTAAGGAGGAGGT+TGG + chr3_1:69490867-69490886 Msa0371320:CDS 50.0%
GGAGGTTCAGAAGCTTGAGA+AGG + chr3_1:69490923-69490942 Msa0371320:CDS 50.0%
! GGTGACTTGATTGCTGCTTC+TGG + chr3_1:69491209-69491228 Msa0371320:CDS 50.0%
AAAGGACGTGCCTATGGAAC+CGG + chr3_1:69491419-69491438 Msa0371320:CDS 50.0%
GTAGCACGATGATCGAGCAT+AGG - chr3_1:69491533-69491552 None:intergenic 50.0%
AGACAAAGACATTGGGGCTC+TGG + chr3_1:69491573-69491592 Msa0371320:CDS 50.0%
GACAAAGACATTGGGGCTCT+GGG + chr3_1:69491574-69491593 Msa0371320:CDS 50.0%
AATTGTACCGTGAAAGGCGG+TGG + chr3_1:69491602-69491621 Msa0371320:CDS 50.0%
TGAAACACCACCGCCTTTCA+CGG - chr3_1:69491612-69491631 None:intergenic 50.0%
ATGGCGGCACTATAACGTAG+CGG - chr3_1:69491913-69491932 None:intergenic 50.0%
! TAGGGGTTATAGCGGGGTTA+TGG - chr3_1:69491932-69491951 None:intergenic 50.0%
ACACATACATGGGTGGATCG+TGG - chr3_1:69492122-69492141 None:intergenic 50.0%
AAACATAGGAGAGGGGGAGT+TGG + chr3_1:69492282-69492301 Msa0371320:intron 50.0%
AACATAGGAGAGGGGGAGTT+GGG + chr3_1:69492283-69492302 Msa0371320:intron 50.0%
GAGACTATAGGCAGGGTAAC+GGG + chr3_1:69492315-69492334 Msa0371320:intron 50.0%
AGACTATAGGCAGGGTAACG+GGG + chr3_1:69492316-69492335 Msa0371320:intron 50.0%
! ATCAGTCGGCTTCCTGACAA+GGG + chr3_1:69493565-69493584 Msa0371320:intron 50.0%
GTTGCCGGAGAGAAAGCTGA+CGG - chr3_1:69490263-69490282 None:intergenic 55.0%
ACGCTCCATTTCACCTCTGG+TGG - chr3_1:69491351-69491370 None:intergenic 55.0%
GTGTGGGTTCAGCCTGGTAA+CGG + chr3_1:69491467-69491486 Msa0371320:CDS 55.0%
GTGAAAGGCGGTGGTGTTTC+AGG + chr3_1:69491611-69491630 Msa0371320:CDS 55.0%
! AGGCGGTGGTGTTTCAGGTA+TGG + chr3_1:69491616-69491635 Msa0371320:intron 55.0%
TGGGGCAGTGTTGTCAATCG+TGG + chr3_1:69491761-69491780 Msa0371320:intron 55.0%
! GGGTTATAGCGGGGTTATGG+CGG - chr3_1:69491929-69491948 None:intergenic 55.0%
CTAAGTGCAGGCCGCAAATC+TGG - chr3_1:69493407-69493426 None:intergenic 55.0%
TTGCGGCCTGCACTTAGAAG+TGG + chr3_1:69493410-69493429 Msa0371320:CDS 55.0%
! GATCAGTCGGCTTCCTGACA+AGG + chr3_1:69493564-69493583 Msa0371320:intron 55.0%
GCACAAGTCCCCGATCGGAA+TGG + chr3_1:69490173-69490192 Msa0371320:five_prime_UTR 60.0%
AAAGCTGACGGCGACGTTGG+CGG - chr3_1:69490251-69490270 None:intergenic 60.0%
GAGAAAGCTGACGGCGACGT+TGG - chr3_1:69490254-69490273 None:intergenic 60.0%
GTCGCCGTCAGCTTTCTCTC+CGG + chr3_1:69490256-69490275 Msa0371320:five_prime_UTR 60.0%
GTGAAGGAGGGGAGAGAGTG+AGG + chr3_1:69490625-69490644 Msa0371320:CDS 60.0%
AGGAGGGGAGAGAGTGAGGA+AGG + chr3_1:69490629-69490648 Msa0371320:CDS 60.0%
TGTCGAGGGTCCGAGTCAAG+AGG + chr3_1:69490902-69490921 Msa0371320:CDS 60.0%
GACGTGCCTATGGAACCGGA+AGG + chr3_1:69491423-69491442 Msa0371320:CDS 60.0%
!! CAGGGTAACGGGGCAGAGAT+GGG + chr3_1:69492326-69492345 Msa0371320:intron 60.0%
!! ACGGGGCAGAGATGGGTTAC+TGG + chr3_1:69492333-69492352 Msa0371320:intron 60.0%
CGAGGGTCCGAGTCAAGAGG+AGG + chr3_1:69490905-69490924 Msa0371320:CDS 65.0%
GCACGTGTGTGGGTTCAGCC+TGG + chr3_1:69491461-69491480 Msa0371320:CDS 65.0%
!! GCAGGGTAACGGGGCAGAGA+TGG + chr3_1:69492325-69492344 Msa0371320:intron 65.0%
ACGTTGGCGGCGGCGTAGGA+AGG - chr3_1:69490238-69490257 None:intergenic 70.0%
GCTGACGGCGACGTTGGCGG+CGG - chr3_1:69490248-69490267 None:intergenic 75.0%
! GGCGACGTTGGCGGCGGCGT+AGG - chr3_1:69490242-69490261 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 69490128 69494076 69490128 ID=Msa0371320;Name=Msa0371320
chr3_1 mRNA 69490128 69494076 69490128 ID=Msa0371320-mRNA-1;Parent=Msa0371320;Name=Msa0371320-mRNA-1;_AED=0.04;_eAED=0.04;_QI=244|1|1|1|1|1|4|415|404
chr3_1 exon 69490128 69490975 69490128 ID=Msa0371320-mRNA-1:exon:14806;Parent=Msa0371320-mRNA-1
chr3_1 exon 69491195 69491632 69491195 ID=Msa0371320-mRNA-1:exon:14807;Parent=Msa0371320-mRNA-1
chr3_1 exon 69493351 69493431 69493351 ID=Msa0371320-mRNA-1:exon:14808;Parent=Msa0371320-mRNA-1
chr3_1 exon 69493570 69494076 69493570 ID=Msa0371320-mRNA-1:exon:14809;Parent=Msa0371320-mRNA-1
chr3_1 five_prime_UTR 69490128 69490371 69490128 ID=Msa0371320-mRNA-1:five_prime_utr;Parent=Msa0371320-mRNA-1
chr3_1 CDS 69490372 69490975 69490372 ID=Msa0371320-mRNA-1:cds;Parent=Msa0371320-mRNA-1
chr3_1 CDS 69491195 69491632 69491195 ID=Msa0371320-mRNA-1:cds;Parent=Msa0371320-mRNA-1
chr3_1 CDS 69493351 69493431 69493351 ID=Msa0371320-mRNA-1:cds;Parent=Msa0371320-mRNA-1
chr3_1 CDS 69493570 69493661 69493570 ID=Msa0371320-mRNA-1:cds;Parent=Msa0371320-mRNA-1
chr3_1 three_prime_UTR 69493662 69494076 69493662 ID=Msa0371320-mRNA-1:three_prime_utr;Parent=Msa0371320-mRNA-1
Gene Sequence

>Msa0371320

ATGCTTTCTCGTTTAATTCCCAAAAAACCCTCTTACATCCTTCGCTTTCTCTCTCTTCCATCCAAAAACCCTAATTTCCCCAATACCCCAATCAATCCCCATTTCACCGTTTTTCCAAAACCCTACTCCAGCAACAACAAAAACAATAACAACAAAGATCCGTTGAGTGTATGGAAGGATTTCGGAGAAACAGAGGAAAAATTCGACAAATTATTCGATGAAGAAAGTGGAAATCTTGATGGGATGAATGAAGGTGAAGGAGGGGAGAGAGTGAGGAAGGAAGTTGATGATGAACAAAAATGGTGGTTAGAAGAAAAGGGTATTGATAATGAAGAAGAGGATGCTTTGTTTAAAGGAATTGATAAGGAAACTGAGGTTAAAGATGGTGAAAGTGGTGATTTTGGTGACCATATTGGTGTTGGAGCAGATAATGTTGATGAACCTTGGAATTTGAAAGAGGATACTGGTGATGTTTTTGGTTTCAAAGAGGATGATGATGTGAGTAAGGAGGAGGTTGGTGAGCTTAATGTTGTCGAGGGTCCGAGTCAAGAGGAGGTTCAGAAGCTTGAGAAGGAAGAGAAAGAGCTCATTGCTGTTCTTGAAGGAACGAAAGCTTTTGGTGACTTGATTGCTGCTTCTGGAATCACCGACGAAATGCTTGAGAGTTTAATTGCGTTGAAAGATCTTAAAGATGTTGATGGGTTGCCACCTCTTAGTGAAATAGAAAAAATGCGCTATGAGAGGAATACTGGCAAATCCACCAGAGGTGAAATGGAGCGTTTAAAGCAAGAGGAAGCGGCGAAAGCTAGAGTGAGACAAGTAGATGATAAAGGACGTGCCTATGGAACCGGAAGGAGAAAATGCAGTATAGCACGTGTGTGGGTTCAGCCTGGTAACGGTAAATTTATGGTTAATGATAAAGAGTTTGACGTCTATTTCCCTATGCTCGATCATCGTGCTACTCTCCTTAGACCTTTCTCTGAGACAAAGACATTGGGGCTCTGGGATGTTAATTGTACCGTGAAAGGCGGTGGTGTTTCAGGGCAAGTTGGAGCTATACGTTTGGGTATTAGCAGGGCTTTGCAAAGTTGGGAACCAGATTTGCGGCCTGCACTTAGAAGTGTCGGCTTCCTGACAAGGGATTCAAGAGTAGTAGAAAGGAAAAAACCTGGAAAGGCCAAAGCAAGAAAAAGTTTTCAATGGGTCAAGCGTTAA
Protein sequence

>Msa0371320

MLSRLIPKKPSYILRFLSLPSKNPNFPNTPINPHFTVFPKPYSSNNKNNNNKDPLSVWKDFGETEEKFDKLFDEESGNLDGMNEGEGGERVRKEVDDEQKWWLEEKGIDNEEEDALFKGIDKETEVKDGESGDFGDHIGVGADNVDEPWNLKEDTGDVFGFKEDDDVSKEEVGELNVVEGPSQEEVQKLEKEEKELIAVLEGTKAFGDLIAASGITDEMLESLIALKDLKDVDGLPPLSEIEKMRYERNTGKSTRGEMERLKQEEAAKARVRQVDDKGRAYGTGRRKCSIARVWVQPGNGKFMVNDKEFDVYFPMLDHRATLLRPFSETKTLGLWDVNCTVKGGGVSGQVGAIRLGISRALQSWEPDLRPALRSVGFLTRDSRVVERKKPGKAKARKSFQWVKR*