AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1366600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366600 MtrunA17_Chr7g0269391 93.729 893 53 2 1 893 1 890 0.0 1557
Msa1366600 MtrunA17_Chr3g0142371 77.539 512 88 9 1 491 1 506 0.0 686
Msa1366600 MtrunA17_Chr3g0142361 87.921 356 36 2 518 873 1 349 0.0 622
Msa1366600 MtrunA17_Chr7g0257671 51.282 585 210 20 1 578 1 517 5.64e-135 419
Msa1366600 MtrunA17_Chr7g0257671 54.688 256 94 5 587 837 429 667 1.99e-73 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366600 AT4G02400.1 47.699 891 408 18 19 891 5 855 0.0 691
Msa1366600 AT5G08600.1 45.433 854 395 19 19 857 8 805 0.0 608
Msa1366600 AT5G08600.2 44.419 887 409 20 19 877 8 838 0.0 602
Msa1366600 AT5G08600.3 40.000 650 324 18 19 658 8 601 2.10e-111 355

Find 204 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCTATTTCTCTGAATA+AGG 0.222756 tig0018459:-148135 None:intergenic
ATGAAAGTTCCCAGAGAAAA+AGG 0.230480 tig0018459:+151122 Msa1366600:CDS
CCATGTATCTGAGGCAAATA+TGG 0.232475 tig0018459:-150535 None:intergenic
CCTCTGGCGTTCTTGTTTCA+TGG 0.236132 tig0018459:-149272 None:intergenic
TTCTTTCTAGATTCTTCTTC+AGG 0.247261 tig0018459:-147392 None:intergenic
ACAGCTAAAGCATAACAAAT+TGG 0.249672 tig0018459:-153126 None:intergenic
TCCAAAGAATACACTGAAAA+TGG 0.251438 tig0018459:-152937 None:intergenic
AGAAGTCTTCAAAGTTTAAT+AGG 0.252682 tig0018459:+150710 Msa1366600:CDS
ATTCCTCTCAAATTTAGTTC+TGG 0.253669 tig0018459:-148233 None:intergenic
ACCAGTGGCAGAAGAGTATT+TGG 0.256001 tig0018459:+150162 Msa1366600:CDS
ACATTAATGTTTCATTGTTT+TGG 0.263935 tig0018459:+153249 Msa1366600:three_prime_UTR
TATTATCAGCACCAATTGTT+TGG 0.264258 tig0018459:-150197 None:intergenic
AACAATTGGTGCTGATAATA+AGG 0.264486 tig0018459:+150200 Msa1366600:CDS
ATTGACTCTGATGATGATTC+TGG 0.264836 tig0018459:+147613 Msa1366600:CDS
GAATAAATAATTACCATAAA+AGG 0.270343 tig0018459:-149699 None:intergenic
AACCCCTTATTCAGAGAAAT+AGG 0.271086 tig0018459:+148131 Msa1366600:CDS
CAATTTGTTGATTTCTTAAC+CGG 0.305399 tig0018459:-148003 None:intergenic
GCCTCTATTACTTCCTGGTT+GGG 0.307969 tig0018459:+151042 Msa1366600:CDS
TACTTCCTGGTTGGGGTCAA+TGG 0.313460 tig0018459:+151050 Msa1366600:CDS
TTTGATGAAAAGACAGATCT+AGG 0.330885 tig0018459:+148172 Msa1366600:CDS
TGCCTCAGATACATGGAAAA+AGG 0.332114 tig0018459:+150542 Msa1366600:CDS
GGCTTTGCTATCATTGCCTT+TGG 0.332623 tig0018459:-152832 None:intergenic
ACCTTTACATCGTGCCTAAC+AGG 0.337743 tig0018459:-150733 None:intergenic
TTCCTCTCAAATTTAGTTCT+GGG 0.338005 tig0018459:-148232 None:intergenic
GCATATTCATTAGCAGCTTC+AGG 0.339373 tig0018459:-149250 None:intergenic
AGTTCATCATGACAAAATTA+TGG 0.340220 tig0018459:+148267 Msa1366600:CDS
TCCCTCGTTCTATTATCTCT+TGG 0.340319 tig0018459:-153025 None:intergenic
CTCCCTATTTCTCTGAATAA+GGG 0.343945 tig0018459:-148134 None:intergenic
TAACAGACGATGATATGTTT+TGG 0.345941 tig0018459:-149182 None:intergenic
AACTAGAATCATCAGGTCTT+TGG 0.348602 tig0018459:+147086 Msa1366600:five_prime_UTR
GAGAAGCCTCTATTACTTCC+TGG 0.348985 tig0018459:+151037 Msa1366600:CDS
AAGACATCTTTGGAAGTATA+AGG 0.349436 tig0018459:-152352 None:intergenic
CAAAGTTTAATAGGCCTGTT+AGG 0.350326 tig0018459:+150719 Msa1366600:CDS
TTGTTATGCTTTAGCTGTTA+AGG 0.351362 tig0018459:+153131 Msa1366600:three_prime_UTR
ACGAGGAACTGACTAGAAAA+AGG 0.357806 tig0018459:+149502 Msa1366600:CDS
TCTAACCCGGCAACTACATT+TGG 0.361095 tig0018459:+152409 Msa1366600:CDS
AAAATCTTGTTTGCCTTATC+CGG 0.361359 tig0018459:-149600 None:intergenic
GTAGTTGCCGGGTTAGATTC+AGG 0.370277 tig0018459:-152403 None:intergenic
ATTATCAGCACCAATTGTTT+GGG 0.370353 tig0018459:-150196 None:intergenic
GATCGTCACGAAGAGGATTA+AGG 0.372975 tig0018459:-147964 None:intergenic
ATGGTGAATATTTATAGAAC+TGG 0.385024 tig0018459:-152918 None:intergenic
AGAATCCTCCAGCTTCTTCA+TGG 0.403400 tig0018459:-150109 None:intergenic
ACCTTCGCTTGATCTGCCTT+TGG 0.407519 tig0018459:-148058 None:intergenic
AGCATCCTTTCTCTTCTTGA+GGG 0.407735 tig0018459:-151152 None:intergenic
CCACTGGTAGATGCTACTAT+TGG 0.408653 tig0018459:-150147 None:intergenic
CTTCATATTCTTGTACAGTA+AGG 0.410508 tig0018459:-150083 None:intergenic
TATAAAACCGATAGAATTTG+AGG 0.410968 tig0018459:+152743 Msa1366600:CDS
AACTAAATTTGAGAGGAATA+TGG 0.412942 tig0018459:+148237 Msa1366600:CDS
CCATATTTGCCTCAGATACA+TGG 0.414348 tig0018459:+150535 Msa1366600:CDS
GACAATCAACGGAAGAAAAC+CGG 0.418141 tig0018459:+147263 Msa1366600:CDS
GAGGAAGAATGATGTTATTC+CGG 0.419305 tig0018459:+147865 Msa1366600:CDS
TGCTTGATAGGTTTCTATAA+AGG 0.420322 tig0018459:+149069 Msa1366600:intron
ACACTCTGTTGCCGCTGCTC+TGG 0.420778 tig0018459:-152786 None:intergenic
AGAGGTCCAAATGTAGTTGC+CGG 0.421778 tig0018459:-152415 None:intergenic
CATCTCAAGAGGAGCTCATT+CGG 0.423337 tig0018459:+150933 Msa1366600:CDS
GAGCATCCTTTCTCTTCTTG+AGG 0.426017 tig0018459:-151153 None:intergenic
AAGCTTCCGCCTACCAAAAT+CGG 0.432729 tig0018459:-152995 None:intergenic
TGACCTTTCTTCTGATTTCG+AGG 0.434404 tig0018459:+147451 Msa1366600:CDS
TTATTATCATTGACAGAGAC+AGG 0.436439 tig0018459:-147428 None:intergenic
TATTTATTCTTACCATCAAA+AGG 0.437025 tig0018459:-147697 None:intergenic
CAGCTAAAGCATAACAAATT+GGG 0.439891 tig0018459:-153125 None:intergenic
GTTAAAGAAAGTTAGATTGA+AGG 0.445755 tig0018459:+149201 Msa1366600:CDS
CTACATTTGGACCTCTTACT+CGG 0.449943 tig0018459:+152422 Msa1366600:CDS
AGGATGTTACAACGAATTAC+CGG 0.452496 tig0018459:+147661 Msa1366600:CDS
GCTTGATCTGCCTTTGGAAG+TGG 0.453063 tig0018459:-148052 None:intergenic
GTTGAAGCAGAGAATGTGTT+GGG 0.453366 tig0018459:-147150 None:intergenic
AGCCTCTATTACTTCCTGGT+TGG 0.459722 tig0018459:+151041 Msa1366600:CDS
ACTCTGATGAAAGACATCTT+TGG 0.462745 tig0018459:-152362 None:intergenic
ATGGCTAAAGCCCAAACAAT+TGG 0.467988 tig0018459:+150186 Msa1366600:CDS
TGCTGATTCTGATCCGGATA+AGG 0.468993 tig0018459:+149587 Msa1366600:CDS
ATCACTGCTGCTACTGTCCA+TGG 0.477773 tig0018459:-149529 None:intergenic
TTGACTCTGATGATGATTCT+GGG 0.479242 tig0018459:+147614 Msa1366600:CDS
GGAAGTAATAGAGGCTTCTC+AGG 0.479287 tig0018459:-151034 None:intergenic
AGAGTCTTCTCAGTTGGAAA+TGG 0.480279 tig0018459:+149225 Msa1366600:CDS
TGAAGATTCCATGAAGAAGC+TGG 0.480768 tig0018459:+150101 Msa1366600:CDS
CGCTGCTCTGGTTTATCGTG+AGG 0.482465 tig0018459:-152774 None:intergenic
TAAAGATAGCAATCCCGACT+TGG 0.484286 tig0018459:-149676 None:intergenic
CCCCAACCAGGAAGTAATAG+AGG 0.486131 tig0018459:-151043 None:intergenic
ACAAAAGACACTAGAAGTGC+TGG 0.486241 tig0018459:+149635 Msa1366600:CDS
ACCCCTTATTCAGAGAAATA+GGG 0.486296 tig0018459:+148132 Msa1366600:CDS
AAAAGAAAGGTTTACCATCC+TGG 0.489615 tig0018459:+151086 Msa1366600:CDS
TTCACTTCCTCAAATTCTAT+CGG 0.489667 tig0018459:-152750 None:intergenic
GATGATGAAATGCCCAAGTC+GGG 0.491051 tig0018459:+149663 Msa1366600:CDS
CTTACTTCAGGCCGAGTAAG+AGG 0.491319 tig0018459:-152433 None:intergenic
TCATCAACATCGACAGGGGT+GGG 0.491947 tig0018459:-147332 None:intergenic
CAGAGTATGCGTATGCCCAT+TGG 0.493073 tig0018459:+152379 Msa1366600:CDS
AACCGGAGTCTTGAATGATC+AGG 0.493279 tig0018459:-147986 None:intergenic
TGAGATGGAAGTTCATAAGA+TGG 0.495179 tig0018459:-150917 None:intergenic
CATCAACATCGACAGGGGTG+GGG 0.495189 tig0018459:-147331 None:intergenic
TCGATTTCATCAACATCGAC+AGG 0.497989 tig0018459:-147338 None:intergenic
GCCTGTTAGGCACGATGTAA+AGG 0.499377 tig0018459:+150732 Msa1366600:CDS
GGCTCCGCAATTTAGCAGCC+TGG 0.501451 tig0018459:-149111 None:intergenic
CGGGTTAGATTCAGGTCCAA+TGG 0.503979 tig0018459:-152395 None:intergenic
GCAACGTGGTTTAGATAAGC+AGG 0.506637 tig0018459:+149437 Msa1366600:CDS
AATAGAGGCTTCTCAGGCTC+GGG 0.507163 tig0018459:-151028 None:intergenic
CAGGGGTGGGGTTTAAGTGT+TGG 0.507747 tig0018459:-147319 None:intergenic
TTCATGTTCTTTGACCATCC+AGG 0.508099 tig0018459:-151104 None:intergenic
TTACCATCAAAAGGCTTGCT+CGG 0.509507 tig0018459:-147688 None:intergenic
CCTCTATTACTTCCTGGTTG+GGG 0.511255 tig0018459:+151043 Msa1366600:CDS
AAGTGGCAACATTGAGAATG+AGG 0.513026 tig0018459:+150281 Msa1366600:CDS
TAATAGAGGCTTCTCAGGCT+CGG 0.513747 tig0018459:-151029 None:intergenic
TCCAAATACTCTTCTGCCAC+TGG 0.516839 tig0018459:-150163 None:intergenic
AAAAGGCTTGCTCGGCATAC+CGG 0.517139 tig0018459:-147680 None:intergenic
TGATAGCGAGGATGACTTTG+AGG 0.518712 tig0018459:+150251 Msa1366600:CDS
TGTGATACTTTGAATACTCA+AGG 0.518840 tig0018459:-153058 None:intergenic
GAAGGCAGAGTCTTCTCAGT+TGG 0.520406 tig0018459:+149219 Msa1366600:CDS
CTAAACCTAGCGGCGTTGCT+AGG 0.522023 tig0018459:+147115 Msa1366600:five_prime_UTR
AACAATGAAACATTAATGTA+CGG 0.524074 tig0018459:-153245 None:intergenic
TTGATGAAAAGACAGATCTA+GGG 0.527190 tig0018459:+148173 Msa1366600:CDS
TCACTAGAACTAGAATCATC+AGG 0.527679 tig0018459:+147079 Msa1366600:five_prime_UTR
AGATGAAGGCAAACGAGGAC+CGG 0.528426 tig0018459:-147282 None:intergenic
AAGTCGAAGTTGAAGGTCAA+GGG 0.530154 tig0018459:+152861 Msa1366600:CDS
TGTGGTATAGAGGCGTGGAT+TGG 0.534234 tig0018459:+150026 Msa1366600:intron
CAGATCAAGCGAAGGTGGAA+AGG 0.534540 tig0018459:+148065 Msa1366600:CDS
ATACCTCGAAATCAGAAGAA+AGG 0.536953 tig0018459:-147454 None:intergenic
TAATCCTAGTCACGATGTTG+TGG 0.538812 tig0018459:+147910 Msa1366600:CDS
GAATGCTGCTGATTCTGATC+CGG 0.540001 tig0018459:+149581 Msa1366600:CDS
ACATATATACCTCAGCCCTC+TGG 0.540183 tig0018459:-149288 None:intergenic
ACTGATATACAGCAAAAGAA+AGG 0.541411 tig0018459:+151073 Msa1366600:CDS
GACTTTGAGGCCAAGAAAAG+TGG 0.542359 tig0018459:+150264 Msa1366600:CDS
TTCTTTGGAAAGATGCACTT+CGG 0.546093 tig0018459:+152951 Msa1366600:three_prime_UTR
TTATGCTTTAGCTGTTAAGG+TGG 0.546687 tig0018459:+153134 Msa1366600:three_prime_UTR
TCTTTGGAAGTATAAGGAAA+AGG 0.548729 tig0018459:-152346 None:intergenic
TCTATAAAGGATGAGAAGGA+TGG 0.549986 tig0018459:+149082 Msa1366600:CDS
GGGTTAGATTCAGGTCCAAT+GGG 0.550457 tig0018459:-152394 None:intergenic
AGAAGCCCTCAAGAAGAGAA+AGG 0.556911 tig0018459:+151147 Msa1366600:CDS
ATCAGCAGCATTCTCATCAT+CGG 0.557010 tig0018459:-149571 None:intergenic
GAGGTCCAAATGTAGTTGCC+GGG 0.559756 tig0018459:-152414 None:intergenic
TCCCTATTTCTCTGAATAAG+GGG 0.561919 tig0018459:-148133 None:intergenic
AAAGTCGAAGTTGAAGGTCA+AGG 0.563646 tig0018459:+152860 Msa1366600:CDS
GAGAAGAAGCGAAATGAAAG+AGG 0.563959 tig0018459:+147191 Msa1366600:CDS
CTCTGAGAAATCAAGCAAGA+AGG 0.565144 tig0018459:+151195 Msa1366600:CDS
TCAGACTCTAGATATAGCTC+CGG 0.566700 tig0018459:-147884 None:intergenic
AACCCAGAACTAAATTTGAG+AGG 0.568491 tig0018459:+148230 Msa1366600:CDS
TGAGAAGGATGGGCATAACC+AGG 0.568538 tig0018459:+149093 Msa1366600:CDS
ACAAGAACGCCAGAGGGCTG+AGG 0.569776 tig0018459:+149279 Msa1366600:CDS
GATGAAGGACAGATGGTGGA+TGG 0.571626 tig0018459:+150872 Msa1366600:CDS
TTCATCAACATCGACAGGGG+TGG 0.577593 tig0018459:-147333 None:intergenic
AGAAGACTTCCGACAATCAA+CGG 0.578262 tig0018459:+147252 Msa1366600:CDS
TCATATCGTAGGCAATAAGA+AGG 0.579455 tig0018459:+147841 Msa1366600:intron
CACGATGTTGTGGAAGGTGA+TGG 0.580194 tig0018459:+147920 Msa1366600:CDS
GGTTTAGATAAGCAGGATGA+AGG 0.580805 tig0018459:+149444 Msa1366600:CDS
CTATAAAGGATGAGAAGGAT+GGG 0.581490 tig0018459:+149083 Msa1366600:CDS
AAAGGCAGATCAAGCGAAGG+TGG 0.582891 tig0018459:+148060 Msa1366600:CDS
GGTTTCTATAAAGGATGAGA+AGG 0.584067 tig0018459:+149078 Msa1366600:intron
TTATGAACTTCCATCTCAAG+AGG 0.584960 tig0018459:+150922 Msa1366600:CDS
AAAGATAGCAATCCCGACTT+GGG 0.584979 tig0018459:-149675 None:intergenic
TCAAGCGAAGGTGGAAAGGA+AGG 0.585407 tig0018459:+148069 Msa1366600:CDS
CGAATGAGCTCCTCTTGAGA+TGG 0.586031 tig0018459:-150932 None:intergenic
CAAAGAAACAAGTCACAAAG+TGG 0.588340 tig0018459:+148107 Msa1366600:CDS
CCTTCCACAACATCGTGACT+AGG 0.590447 tig0018459:-147914 None:intergenic
TACAGATGATGAAGGACAGA+TGG 0.590901 tig0018459:+150865 Msa1366600:CDS
CGTTGAAGCAGAGAATGTGT+TGG 0.591483 tig0018459:-147151 None:intergenic
GATAGCGATACAGATGATGA+AGG 0.593448 tig0018459:+150857 Msa1366600:CDS
CATTGGACCTGAATCTAACC+CGG 0.599340 tig0018459:+152396 Msa1366600:CDS
AAGAAGTTGAATAGAACCAA+AGG 0.600324 tig0018459:+152816 Msa1366600:CDS
GAAAGGTTTACCATCCTGGA+TGG 0.600524 tig0018459:+151090 Msa1366600:CDS
TTCAAAGATGAAGGCAAACG+AGG 0.601593 tig0018459:-147287 None:intergenic
CGATTTCATCAACATCGACA+GGG 0.604630 tig0018459:-147337 None:intergenic
TGTTCATGCACCACTTCCAA+AGG 0.604646 tig0018459:+148042 Msa1366600:CDS
ATCCTGATCATTCAAGACTC+CGG 0.607138 tig0018459:+147984 Msa1366600:CDS
AGATGATGAAATGCCCAAGT+CGG 0.607430 tig0018459:+149662 Msa1366600:CDS
CCTAGTCACGATGTTGTGGA+AGG 0.607641 tig0018459:+147914 Msa1366600:CDS
ATAACCAGGCTGCTAAATTG+CGG 0.608153 tig0018459:+149107 Msa1366600:CDS
GTGATACTTTGAATACTCAA+GGG 0.614366 tig0018459:-153057 None:intergenic
AAGATGATGAGAGACATGAA+AGG 0.617021 tig0018459:+147641 Msa1366600:CDS
AAGAAGCTGGAGGATTCTGA+TGG 0.618164 tig0018459:+150114 Msa1366600:CDS
TCTTTGAAAATGTTCAGTCA+CGG 0.619063 tig0018459:-149478 None:intergenic
GTGCAGGTGGTGAAGAAACC+AGG 0.621465 tig0018459:+152714 Msa1366600:intron
TGTTCTTTGACCATCCAGGA+TGG 0.625183 tig0018459:-151100 None:intergenic
TCCAAGAGATAATAGAACGA+GGG 0.626603 tig0018459:+153024 Msa1366600:three_prime_UTR
CTCTGATGATGATTCTGGGG+AGG 0.628586 tig0018459:+147618 Msa1366600:CDS
GGGAAGTGATCATCTGCAGA+AGG 0.630064 tig0018459:+150302 Msa1366600:CDS
GACACAAACACAAAAGTCCA+TGG 0.630633 tig0018459:+149400 Msa1366600:CDS
TCAGTCCATTGACCCCAACC+AGG 0.630731 tig0018459:-151055 None:intergenic
TGACTCTGATGATGATTCTG+GGG 0.636517 tig0018459:+147615 Msa1366600:CDS
AGATGATGAAGGACAGATGG+TGG 0.637774 tig0018459:+150868 Msa1366600:CDS
CATGAAACAAGAACGCCAGA+GGG 0.639643 tig0018459:+149273 Msa1366600:CDS
AATTGGTGCTGATAATAAGG+TGG 0.640246 tig0018459:+150203 Msa1366600:CDS
CAATCTGATGATGACGACGA+CGG 0.643705 tig0018459:+147559 Msa1366600:CDS
TGGCAGAAGAGTATTTGGAA+TGG 0.644354 tig0018459:+150167 Msa1366600:CDS
TTACGATAACAGTGATAGCG+AGG 0.650293 tig0018459:+150239 Msa1366600:CDS
TGATCAGGATCGTCACGAAG+AGG 0.652108 tig0018459:-147971 None:intergenic
GTAGACCTAGCAACGCCGCT+AGG 0.654395 tig0018459:-147120 None:intergenic
TCCAAAGGCAGATCAAGCGA+AGG 0.655899 tig0018459:+148057 Msa1366600:CDS
CCATGAAACAAGAACGCCAG+AGG 0.656373 tig0018459:+149272 Msa1366600:CDS
AGTGGCAACATTGAGAATGA+GGG 0.656546 tig0018459:+150282 Msa1366600:CDS
AGCGAAGGTGGAAAGGAAGG+TGG 0.656706 tig0018459:+148072 Msa1366600:CDS
TCGTAGGCAATAAGAAGGCG+AGG 0.658257 tig0018459:+147846 Msa1366600:intron
TTTGTTGTGGTATAGAGGCG+TGG 0.661646 tig0018459:+150021 Msa1366600:intron
TGATGGACGAATTACTATCG+AGG 0.680624 tig0018459:+147937 Msa1366600:CDS
TATTATCATTGACAGAGACA+GGG 0.681643 tig0018459:-147427 None:intergenic
AAAGACACTAGAAGTGCTGG+AGG 0.683825 tig0018459:+149638 Msa1366600:CDS
TAGTCTTCTTGACATGAACA+AGG 0.684381 tig0018459:+148312 Msa1366600:CDS
AGATTCCATGAAGAAGCTGG+AGG 0.687128 tig0018459:+150104 Msa1366600:CDS
CCTTATTCAGAGAAATAGGG+AGG 0.695528 tig0018459:+148135 Msa1366600:CDS
TTGAAGCAGAGAATGTGTTG+GGG 0.695574 tig0018459:-147149 None:intergenic
CTCACGATAAACCAGAGCAG+CGG 0.696038 tig0018459:+152775 Msa1366600:CDS
ATCCAAGAGATAATAGAACG+AGG 0.703965 tig0018459:+153023 Msa1366600:three_prime_UTR
CGTCACGAAGAGGATTAAGG+AGG 0.705412 tig0018459:-147961 None:intergenic
GATTTCATCAACATCGACAG+GGG 0.709436 tig0018459:-147336 None:intergenic
TTGGCAATCTCTAAACCTAG+CGG 0.710692 tig0018459:+147105 Msa1366600:five_prime_UTR
CTTCAGCGTAAAATGCAACG+TGG 0.719561 tig0018459:+149423 Msa1366600:CDS
CCAATAGTAGCATCTACCAG+TGG 0.721080 tig0018459:+150147 Msa1366600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTTGTAAAAAGTT+TGG - tig0018459:151486-151505 None:intergenic 10.0%
!!! TTTAATTTTTATCATATCGT+AGG + tig0018459:147830-147849 Msa1366600:intron 15.0%
!! TAAATTTCAAAATTCAAACA+TGG + tig0018459:148537-148556 Msa1366600:intron 15.0%
!! GAATAAATAATTACCATAAA+AGG - tig0018459:149702-149721 None:intergenic 15.0%
!!! AATATATACTTTTGAAATGT+TGG - tig0018459:151540-151559 None:intergenic 15.0%
!! TATATAATTTAGTGTATGTT+CGG + tig0018459:151837-151856 Msa1366600:intron 15.0%
!! TTGATTTATACATAAATGTA+TGG + tig0018459:152061-152080 Msa1366600:intron 15.0%
!! CTCTTAACTAATTTAAATAA+AGG - tig0018459:152528-152547 None:intergenic 15.0%
!!! ATGATTTTATTGGAAAAAAG+AGG + tig0018459:147584-147603 Msa1366600:CDS 20.0%
!! TATTTATTCTTACCATCAAA+AGG - tig0018459:147700-147719 None:intergenic 20.0%
!! TTTATGTAATTTATGTTAGC+TGG + tig0018459:148346-148365 Msa1366600:intron 20.0%
!! AATGAAAATTCAAGACATTT+GGG - tig0018459:148474-148493 None:intergenic 20.0%
!! AAATGAAAATTCAAGACATT+TGG - tig0018459:148475-148494 None:intergenic 20.0%
!!! GTTATTTTCCAATCATAAAA+GGG - tig0018459:148635-148654 None:intergenic 20.0%
!! CATATATGTTATTACATTGA+TGG - tig0018459:148900-148919 None:intergenic 20.0%
!!! TAATAGAATACGATTCTTTT+AGG + tig0018459:148927-148946 Msa1366600:intron 20.0%
!! TCATAAACAACAAAAAACAA+CGG - tig0018459:149049-149068 None:intergenic 20.0%
!! TAAAAGAAGATAAATGTTCT+TGG + tig0018459:149329-149348 Msa1366600:intron 20.0%
!!! ATATATCTTTTGCAAATGTT+TGG + tig0018459:149913-149932 Msa1366600:intron 20.0%
!!! GGTTTCTTAAATATTTTCTT+TGG + tig0018459:149934-149953 Msa1366600:intron 20.0%
!!! AATTTTCTGCTTTTAGTTTA+TGG + tig0018459:149987-150006 Msa1366600:intron 20.0%
!!! TGAATAATTTCCTATTTTCT+TGG + tig0018459:150391-150410 Msa1366600:intron 20.0%
!!! AGATGTTTGTTTTACTTAAT+GGG + tig0018459:150421-150440 Msa1366600:intron 20.0%
!! TTTGATATCTTCCATATATA+TGG + tig0018459:150618-150637 Msa1366600:intron 20.0%
!! AACAATTCAGTTTATATTCT+TGG - tig0018459:150777-150796 None:intergenic 20.0%
!! AAGAATATAAACTGAATTGT+TGG + tig0018459:150776-150795 Msa1366600:intron 20.0%
!! CAATGTTGATGTTTATAATT+CGG - tig0018459:151263-151282 None:intergenic 20.0%
!! ATAAAGAAGAAAAAAATCAG+TGG - tig0018459:151446-151465 None:intergenic 20.0%
!!! TTTTTTTCTTCTTTATTACC+AGG + tig0018459:151450-151469 Msa1366600:intron 20.0%
!!! TTTTTTCTTCTTTATTACCA+GGG + tig0018459:151451-151470 Msa1366600:intron 20.0%
!! TATATATTATGCTCTAATGT+TGG + tig0018459:151552-151571 Msa1366600:intron 20.0%
!!! ATAATTGATTTTGTCATGTT+AGG + tig0018459:151899-151918 Msa1366600:intron 20.0%
!! CAAAAGAATAAAATCAAAAC+CGG - tig0018459:152289-152308 None:intergenic 20.0%
!! TGATGATAAACACAAATAAA+AGG - tig0018459:152492-152511 None:intergenic 20.0%
!! AATTAGTTAAGAGTGATATT+TGG + tig0018459:152535-152554 Msa1366600:intron 20.0%
!! AACAATGAAACATTAATGTA+CGG - tig0018459:153248-153267 None:intergenic 20.0%
!!! ACATTAATGTTTCATTGTTT+TGG + tig0018459:153249-153268 Msa1366600:three_prime_UTR 20.0%
!!! ATCTCTTTTTTCAAAGATGA+AGG - tig0018459:147299-147318 None:intergenic 25.0%
! CGAAATGAACAATGAAATTA+AGG - tig0018459:147493-147512 None:intergenic 25.0%
!!! CAATTTGTTGATTTCTTAAC+CGG - tig0018459:148006-148025 None:intergenic 25.0%
!!! TTTTCATCAAAGTACTTAGT+AGG - tig0018459:148163-148182 None:intergenic 25.0%
! AACTAAATTTGAGAGGAATA+TGG + tig0018459:148237-148256 Msa1366600:CDS 25.0%
! AGTTCATCATGACAAAATTA+TGG + tig0018459:148267-148286 Msa1366600:CDS 25.0%
!! GGATTTGTTTGATAAATTAC+TGG + tig0018459:148558-148577 Msa1366600:intron 25.0%
!! TTTGATAAATTACTGGTTGT+TGG + tig0018459:148565-148584 Msa1366600:intron 25.0%
!!! GGTTATTTTCCAATCATAAA+AGG - tig0018459:148636-148655 None:intergenic 25.0%
! TTATGATTGGAAAATAACCT+TGG + tig0018459:148637-148656 Msa1366600:intron 25.0%
!! CTACAATGCAATAATTTGTA+AGG - tig0018459:148734-148753 None:intergenic 25.0%
! AGAACAATAAAAATACTGAG+AGG - tig0018459:148782-148801 None:intergenic 25.0%
! ATATGTTATTACATTGATGG+CGG - tig0018459:148897-148916 None:intergenic 25.0%
! GTTAAAGAAAGTTAGATTGA+AGG + tig0018459:149201-149220 Msa1366600:CDS 25.0%
!! ATTGCTATCTTTACCTTTTA+TGG + tig0018459:149686-149705 Msa1366600:CDS 25.0%
! GGGTAACTAATATTTATTTC+AGG - tig0018459:149746-149765 None:intergenic 25.0%
! ATACATATATATACCATCAG+AGG - tig0018459:149771-149790 None:intergenic 25.0%
!!! CAGATGTTTGTTTTACTTAA+TGG + tig0018459:150420-150439 Msa1366600:intron 25.0%
! TTTATGCATTTCTTGAAACT+TGG + tig0018459:150454-150473 Msa1366600:intron 25.0%
! AGAAGTCTTCAAAGTTTAAT+AGG + tig0018459:150710-150729 Msa1366600:CDS 25.0%
!!! TGTAGAAGATGATTTTGAAA+AGG + tig0018459:150976-150995 Msa1366600:CDS 25.0%
! TGACTTTAAATACAAGGTTT+AGG + tig0018459:151222-151241 Msa1366600:intron 25.0%
! AAGATACTGATATCTTAAAC+TGG - tig0018459:151420-151439 None:intergenic 25.0%
!!! GTATTGTCGATCTTTTATTT+TGG - tig0018459:151750-151769 None:intergenic 25.0%
! AAGGTAAAGTGATTTATGAT+AGG - tig0018459:152112-152131 None:intergenic 25.0%
! TCTGACTAAAAGTAAATTGA+AGG - tig0018459:152131-152150 None:intergenic 25.0%
!!! CGGTTTTGATTTTATTCTTT+TGG + tig0018459:152287-152306 Msa1366600:intron 25.0%
!! TTTATTCTTTTGGATATGAC+AGG + tig0018459:152297-152316 Msa1366600:intron 25.0%
!!! TGTTTTGAAAAACTTACTTC+AGG - tig0018459:152448-152467 None:intergenic 25.0%
! TTAAGAGCTTTACTACATAA+AGG - tig0018459:152569-152588 None:intergenic 25.0%
! TATGTAGTAAAGCTCTTAAT+TGG + tig0018459:152570-152589 Msa1366600:intron 25.0%
! CTCTTAATTGGATATACTTA+CGG + tig0018459:152582-152601 Msa1366600:intron 25.0%
! TCTTAATTGGATATACTTAC+GGG + tig0018459:152583-152602 Msa1366600:intron 25.0%
! GCTACAAAAGAAAAAAATAC+AGG - tig0018459:152670-152689 None:intergenic 25.0%
! AAATATATTCTTGTATGTGC+AGG + tig0018459:152698-152717 Msa1366600:intron 25.0%
! TATAAAACCGATAGAATTTG+AGG + tig0018459:152743-152762 Msa1366600:CDS 25.0%
! ATGGTGAATATTTATAGAAC+TGG - tig0018459:152921-152940 None:intergenic 25.0%
!!! CTTCTTAGACTTCTTTTTTC+CGG - tig0018459:147237-147256 None:intergenic 30.0%
TTCTTTCTAGATTCTTCTTC+AGG - tig0018459:147395-147414 None:intergenic 30.0%
TATTATCATTGACAGAGACA+GGG - tig0018459:147430-147449 None:intergenic 30.0%
TTATTATCATTGACAGAGAC+AGG - tig0018459:147431-147450 None:intergenic 30.0%
CTGAATCCATTTGTTTGTTT+AGG + tig0018459:147525-147544 Msa1366600:intron 30.0%
TCTCATCCTAAACAAACAAA+TGG - tig0018459:147534-147553 None:intergenic 30.0%
TTTGATGAAAAGACAGATCT+AGG + tig0018459:148172-148191 Msa1366600:CDS 30.0%
TTGATGAAAAGACAGATCTA+GGG + tig0018459:148173-148192 Msa1366600:CDS 30.0%
!! TTCCTCTCAAATTTAGTTCT+GGG - tig0018459:148235-148254 None:intergenic 30.0%
! ATTCCTCTCAAATTTAGTTC+TGG - tig0018459:148236-148255 None:intergenic 30.0%
! TTTTACATTACCGATAGTAG+AGG + tig0018459:148377-148396 Msa1366600:intron 30.0%
ATTCTATGATCCTCTACTAT+CGG - tig0018459:148390-148409 None:intergenic 30.0%
TTATACATCAATCATGGACT+CGG - tig0018459:148451-148470 None:intergenic 30.0%
! TTTGGGTTATACATCAATCA+TGG - tig0018459:148457-148476 None:intergenic 30.0%
TACTTTGCGTTTAGCATTTA+TGG + tig0018459:148507-148526 Msa1366600:intron 30.0%
AATAAAAATACTGAGAGGAG+GGG - tig0018459:148777-148796 None:intergenic 30.0%
CAATAAAAATACTGAGAGGA+GGG - tig0018459:148778-148797 None:intergenic 30.0%
ACAATAAAAATACTGAGAGG+AGG - tig0018459:148779-148798 None:intergenic 30.0%
!!! GAATTTTTTTACTACTGCCA+TGG + tig0018459:148843-148862 Msa1366600:intron 30.0%
!!! CAGTTGGTGCTATTAATTTT+TGG - tig0018459:148978-148997 None:intergenic 30.0%
! TGTTGTTTATGATGCTTGAT+AGG + tig0018459:149057-149076 Msa1366600:intron 30.0%
TGCTTGATAGGTTTCTATAA+AGG + tig0018459:149069-149088 Msa1366600:intron 30.0%
! TAACAGACGATGATATGTTT+TGG - tig0018459:149185-149204 None:intergenic 30.0%
ATGCGTTCCTAAAATAAGTT+GGG - tig0018459:149372-149391 None:intergenic 30.0%
! TCTTTGAAAATGTTCAGTCA+CGG - tig0018459:149481-149500 None:intergenic 30.0%
! AAAATCTTGTTTGCCTTATC+CGG - tig0018459:149603-149622 None:intergenic 30.0%
TATATATACCATCAGAGGTT+GGG - tig0018459:149766-149785 None:intergenic 30.0%
ATATATATACCATCAGAGGT+TGG - tig0018459:149767-149786 None:intergenic 30.0%
ATATAAGCCATAGTCTTTGT+GGG - tig0018459:149804-149823 None:intergenic 30.0%
TATATAAGCCATAGTCTTTG+TGG - tig0018459:149805-149824 None:intergenic 30.0%
AATACATGTCCTATTGATAC+TGG + tig0018459:149861-149880 Msa1366600:intron 30.0%
ATATATGCCTTCATCATAGT+TGG - tig0018459:149899-149918 None:intergenic 30.0%
AATTACCATCTGACAATTTC+AGG - tig0018459:149971-149990 None:intergenic 30.0%
CTTCATATTCTTGTACAGTA+AGG - tig0018459:150086-150105 None:intergenic 30.0%
ATTATCAGCACCAATTGTTT+GGG - tig0018459:150199-150218 None:intergenic 30.0%
TATTATCAGCACCAATTGTT+TGG - tig0018459:150200-150219 None:intergenic 30.0%
!! AACAATTGGTGCTGATAATA+AGG + tig0018459:150200-150219 Msa1366600:CDS 30.0%
!!! TCGCAAAGAATCTGTTTTTA+AGG + tig0018459:150368-150387 Msa1366600:CDS 30.0%
GATGAGATTGTAAAAAATCC+CGG + tig0018459:150489-150508 Msa1366600:CDS 30.0%
ATGAGATTGTAAAAAATCCC+GGG + tig0018459:150490-150509 Msa1366600:CDS 30.0%
! GAAACTTCGTATGTAGTTTT+TGG - tig0018459:150516-150535 None:intergenic 30.0%
CCAACAAAATGCCATATATA+TGG - tig0018459:150632-150651 None:intergenic 30.0%
! CCATATATATGGCATTTTGT+TGG + tig0018459:150629-150648 Msa1366600:intron 30.0%
! TTGGACTGATTTACTGATAA+TGG + tig0018459:150648-150667 Msa1366600:intron 30.0%
! TGGACTGATTTACTGATAAT+GGG + tig0018459:150649-150668 Msa1366600:intron 30.0%
!! AGCTCTGAAAAAGATCAATT+GGG + tig0018459:150830-150849 Msa1366600:CDS 30.0%
!! TGATTTTGAAAAGGATAAGC+AGG + tig0018459:150985-151004 Msa1366600:CDS 30.0%
ACTGATATACAGCAAAAGAA+AGG + tig0018459:151073-151092 Msa1366600:CDS 30.0%
GGTTAGTGACTTTAAATACA+AGG + tig0018459:151216-151235 Msa1366600:intron 30.0%
! ATAATTCGGAAGCATATGAA+AGG - tig0018459:151249-151268 None:intergenic 30.0%
ATCAACATTGAAGACTATGT+CGG + tig0018459:151273-151292 Msa1366600:intron 30.0%
! TGCGTCTCAAAATCTAATTT+TGG - tig0018459:151664-151683 None:intergenic 30.0%
! AGTCCAAACTGATTTCAAAT+AGG + tig0018459:151687-151706 Msa1366600:intron 30.0%
! AAGCCTATTTGAAATCAGTT+TGG - tig0018459:151693-151712 None:intergenic 30.0%
! GAAGTCAAAATTGATTCTAG+AGG + tig0018459:151873-151892 Msa1366600:intron 30.0%
!! TTTCAAGTTAGAATCAGCTA+TGG - tig0018459:151953-151972 None:intergenic 30.0%
ATAAACAGTACAGAAGACAA+TGG - tig0018459:152241-152260 None:intergenic 30.0%
! TCTTTGGAAGTATAAGGAAA+AGG - tig0018459:152349-152368 None:intergenic 30.0%
! AAGACATCTTTGGAAGTATA+AGG - tig0018459:152355-152374 None:intergenic 30.0%
!! AGTTTTTCAAAACAGTTCCT+TGG + tig0018459:152454-152473 Msa1366600:intron 30.0%
AAAGGATAAAATGTTTGCCA+AGG - tig0018459:152474-152493 None:intergenic 30.0%
!! ATCGGTTTTATAATAACACC+TGG - tig0018459:152735-152754 None:intergenic 30.0%
TTCACTTCCTCAAATTCTAT+CGG - tig0018459:152753-152772 None:intergenic 30.0%
AAGAAGTTGAATAGAACCAA+AGG + tig0018459:152816-152835 Msa1366600:CDS 30.0%
!!! CTTCAACTTCGACTTTTTTA+TGG - tig0018459:152856-152875 None:intergenic 30.0%
CATAAAAAAGTCGAAGTTGA+AGG + tig0018459:152854-152873 Msa1366600:CDS 30.0%
! ACCATTTTCAGTGTATTCTT+TGG + tig0018459:152936-152955 Msa1366600:three_prime_UTR 30.0%
TCCAAAGAATACACTGAAAA+TGG - tig0018459:152940-152959 None:intergenic 30.0%
!! AGAGAAAAATAGACCGATTT+TGG + tig0018459:152982-153001 Msa1366600:three_prime_UTR 30.0%
!! AAAAATAGACCGATTTTGGT+AGG + tig0018459:152986-153005 Msa1366600:three_prime_UTR 30.0%
GTGATACTTTGAATACTCAA+GGG - tig0018459:153060-153079 None:intergenic 30.0%
TGTGATACTTTGAATACTCA+AGG - tig0018459:153061-153080 None:intergenic 30.0%
CAGCTAAAGCATAACAAATT+GGG - tig0018459:153128-153147 None:intergenic 30.0%
ACAGCTAAAGCATAACAAAT+TGG - tig0018459:153129-153148 None:intergenic 30.0%
TTGTTATGCTTTAGCTGTTA+AGG + tig0018459:153131-153150 Msa1366600:three_prime_UTR 30.0%
TCACTAGAACTAGAATCATC+AGG + tig0018459:147079-147098 Msa1366600:five_prime_UTR 35.0%
AACTAGAATCATCAGGTCTT+TGG + tig0018459:147086-147105 Msa1366600:five_prime_UTR 35.0%
CTTCAACGCTTCAACAAAAA+TGG + tig0018459:147166-147185 Msa1366600:exon 35.0%
ATACCTCGAAATCAGAAGAA+AGG - tig0018459:147457-147476 None:intergenic 35.0%
! ATTGACTCTGATGATGATTC+TGG + tig0018459:147613-147632 Msa1366600:CDS 35.0%
! TTGACTCTGATGATGATTCT+GGG + tig0018459:147614-147633 Msa1366600:CDS 35.0%
AAGATGATGAGAGACATGAA+AGG + tig0018459:147641-147660 Msa1366600:CDS 35.0%
AGGATGTTACAACGAATTAC+CGG + tig0018459:147661-147680 Msa1366600:CDS 35.0%
TCATATCGTAGGCAATAAGA+AGG + tig0018459:147841-147860 Msa1366600:intron 35.0%
GAGGAAGAATGATGTTATTC+CGG + tig0018459:147865-147884 Msa1366600:CDS 35.0%
CAAAGAAACAAGTCACAAAG+TGG + tig0018459:148107-148126 Msa1366600:CDS 35.0%
AACCCCTTATTCAGAGAAAT+AGG + tig0018459:148131-148150 Msa1366600:CDS 35.0%
ACCCCTTATTCAGAGAAATA+GGG + tig0018459:148132-148151 Msa1366600:CDS 35.0%
! TCCCTATTTCTCTGAATAAG+GGG - tig0018459:148136-148155 None:intergenic 35.0%
! CTCCCTATTTCTCTGAATAA+GGG - tig0018459:148137-148156 None:intergenic 35.0%
!! GATCTAGGGTTTTCAACTAT+AGG + tig0018459:148187-148206 Msa1366600:CDS 35.0%
AACCCAGAACTAAATTTGAG+AGG + tig0018459:148230-148249 Msa1366600:CDS 35.0%
ATGGAAGCTCATAAAAACGA+TGG + tig0018459:148286-148305 Msa1366600:CDS 35.0%
TAGTCTTCTTGACATGAACA+AGG + tig0018459:148312-148331 Msa1366600:CDS 35.0%
! AAACCTGATTGTCTTTTTCC+AGG + tig0018459:148413-148432 Msa1366600:intron 35.0%
! GTTGTTCTCCCTTTTATGAT+TGG + tig0018459:148624-148643 Msa1366600:intron 35.0%
TGATTGGAAAATAACCTTGG+CGG + tig0018459:148640-148659 Msa1366600:intron 35.0%
TAACTGAGGAGGAATTAAGA+TGG + tig0018459:148666-148685 Msa1366600:intron 35.0%
ATAAAAATACTGAGAGGAGG+GGG - tig0018459:148776-148795 None:intergenic 35.0%
! TTTCTACATGGTTGGTTAAG+AGG - tig0018459:148806-148825 None:intergenic 35.0%
AACCAACCATGTAGAAAGAT+TGG + tig0018459:148809-148828 Msa1366600:intron 35.0%
ATCCAATCTTTCTACATGGT+TGG - tig0018459:148814-148833 None:intergenic 35.0%
TGCAATCCAATCTTTCTACA+TGG - tig0018459:148818-148837 None:intergenic 35.0%
TTGGCATGAGTAATTGAGTA+TGG - tig0018459:148959-148978 None:intergenic 35.0%
AGAAATTTGAACAGTGCAGT+TGG - tig0018459:148994-149013 None:intergenic 35.0%
GGTTTCTATAAAGGATGAGA+AGG + tig0018459:149078-149097 Msa1366600:intron 35.0%
TCTATAAAGGATGAGAAGGA+TGG + tig0018459:149082-149101 Msa1366600:CDS 35.0%
CTATAAAGGATGAGAAGGAT+GGG + tig0018459:149083-149102 Msa1366600:CDS 35.0%
TCATCTCATGACGAAAAAGA+AGG - tig0018459:149135-149154 None:intergenic 35.0%
!! TCTTTTTCGTCATGAGATGA+AGG + tig0018459:149135-149154 Msa1366600:CDS 35.0%
!! CTCACTTCCCAACTTATTTT+AGG + tig0018459:149362-149381 Msa1366600:intron 35.0%
CATGCGTTCCTAAAATAAGT+TGG - tig0018459:149373-149392 None:intergenic 35.0%
! TGAACATTTTCAAAGACACG+AGG + tig0018459:149485-149504 Msa1366600:CDS 35.0%
GACTAGAAAAAGGAAAACCA+TGG + tig0018459:149512-149531 Msa1366600:CDS 35.0%
ATGTCCTATTGATACTGGAA+AGG + tig0018459:149866-149885 Msa1366600:intron 35.0%
TGTCCTATTGATACTGGAAA+GGG + tig0018459:149867-149886 Msa1366600:intron 35.0%
TAAAGCCTGAAATTGTCAGA+TGG + tig0018459:149963-149982 Msa1366600:intron 35.0%
CTATACCACAACAAATCAGA+TGG - tig0018459:150016-150035 None:intergenic 35.0%
!! TCTGATTTGTTGTGGTATAG+AGG + tig0018459:150016-150035 Msa1366600:intron 35.0%
!! AATTGGTGCTGATAATAAGG+TGG + tig0018459:150203-150222 Msa1366600:CDS 35.0%
TCTGAGAAGTCCAAGAAAAT+AGG - tig0018459:150404-150423 None:intergenic 35.0%
! TACCTTTTTCCATGTATCTG+AGG - tig0018459:150547-150566 None:intergenic 35.0%
! GGACTGATTTACTGATAATG+GGG + tig0018459:150650-150669 Msa1366600:intron 35.0%
CAAAGTTTAATAGGCCTGTT+AGG + tig0018459:150719-150738 Msa1366600:CDS 35.0%
!! GAGCTCTGAAAAAGATCAAT+TGG + tig0018459:150829-150848 Msa1366600:intron 35.0%
TGAAAAAGATCAATTGGGAG+AGG + tig0018459:150835-150854 Msa1366600:CDS 35.0%
TGAGATGGAAGTTCATAAGA+TGG - tig0018459:150920-150939 None:intergenic 35.0%
TTATGAACTTCCATCTCAAG+AGG + tig0018459:150922-150941 Msa1366600:CDS 35.0%
AAAAGAAAGGTTTACCATCC+TGG + tig0018459:151086-151105 Msa1366600:CDS 35.0%
ATGAAAGTTCCCAGAGAAAA+AGG + tig0018459:151122-151141 Msa1366600:CDS 35.0%
TGAAAGTTCCCAGAGAAAAA+GGG + tig0018459:151123-151142 Msa1366600:CDS 35.0%
TATTATGCTCTAATGTTGGC+AGG + tig0018459:151556-151575 Msa1366600:intron 35.0%
AGATGCTTACATCAACTCAA+AGG - tig0018459:151602-151621 None:intergenic 35.0%
!! AATACTTCAGTGTTGGTCTA+CGG + tig0018459:151765-151784 Msa1366600:intron 35.0%
!!! AATTTTGACTTCTCCAGAAG+TGG - tig0018459:151865-151884 None:intergenic 35.0%
!! CGTTTTTGTTTGGAGTTTCT+CGG - tig0018459:152323-152342 None:intergenic 35.0%
CGAGAAACTCCAAACAAAAA+CGG + tig0018459:152321-152340 Msa1366600:CDS 35.0%
ACTCTGATGAAAGACATCTT+TGG - tig0018459:152365-152384 None:intergenic 35.0%
CTTTACTACATAAAGGAGGA+CGG - tig0018459:152562-152581 None:intergenic 35.0%
AGAGCTTTACTACATAAAGG+AGG - tig0018459:152566-152585 None:intergenic 35.0%
! TTGGATATACTTACGGGTTT+TGG + tig0018459:152589-152608 Msa1366600:intron 35.0%
!!! ATATACTTACGGGTTTTGGA+GGG + tig0018459:152593-152612 Msa1366600:intron 35.0%
TATATTCTTGTATGTGCAGG+TGG + tig0018459:152701-152720 Msa1366600:intron 35.0%
GTCAAGGGAAAAAAGTAAGT+GGG + tig0018459:152876-152895 Msa1366600:exon 35.0%
! TTCTTTGGAAAGATGCACTT+CGG + tig0018459:152951-152970 Msa1366600:three_prime_UTR 35.0%
ATCCAAGAGATAATAGAACG+AGG + tig0018459:153023-153042 Msa1366600:three_prime_UTR 35.0%
TCCAAGAGATAATAGAACGA+GGG + tig0018459:153024-153043 Msa1366600:three_prime_UTR 35.0%
TTATGCTTTAGCTGTTAAGG+TGG + tig0018459:153134-153153 Msa1366600:three_prime_UTR 35.0%
! CTGCGACAATTTTCTTATCT+TGG + tig0018459:153175-153194 Msa1366600:three_prime_UTR 35.0%
TTGGCAATCTCTAAACCTAG+CGG + tig0018459:147105-147124 Msa1366600:five_prime_UTR 40.0%
TTGAAGCAGAGAATGTGTTG+GGG - tig0018459:147152-147171 None:intergenic 40.0%
GTTGAAGCAGAGAATGTGTT+GGG - tig0018459:147153-147172 None:intergenic 40.0%
GAGAAGAAGCGAAATGAAAG+AGG + tig0018459:147191-147210 Msa1366600:CDS 40.0%
!!! TAGACTTCTTTTTTCCGGTG+TGG - tig0018459:147232-147251 None:intergenic 40.0%
AGAAGACTTCCGACAATCAA+CGG + tig0018459:147252-147271 Msa1366600:CDS 40.0%
!! GGTTTTCTTCCGTTGATTGT+CGG - tig0018459:147264-147283 None:intergenic 40.0%
GACAATCAACGGAAGAAAAC+CGG + tig0018459:147263-147282 Msa1366600:CDS 40.0%
TTCAAAGATGAAGGCAAACG+AGG - tig0018459:147290-147309 None:intergenic 40.0%
GATTTCATCAACATCGACAG+GGG - tig0018459:147339-147358 None:intergenic 40.0%
CGATTTCATCAACATCGACA+GGG - tig0018459:147340-147359 None:intergenic 40.0%
TCGATTTCATCAACATCGAC+AGG - tig0018459:147341-147360 None:intergenic 40.0%
TGACCTTTCTTCTGATTTCG+AGG + tig0018459:147451-147470 Msa1366600:CDS 40.0%
! GACGACGGCTATGATTTTAT+TGG + tig0018459:147574-147593 Msa1366600:CDS 40.0%
! TGACTCTGATGATGATTCTG+GGG + tig0018459:147615-147634 Msa1366600:CDS 40.0%
! TTACCATCAAAAGGCTTGCT+CGG - tig0018459:147691-147710 None:intergenic 40.0%
TCAGACTCTAGATATAGCTC+CGG - tig0018459:147887-147906 None:intergenic 40.0%
TAATCCTAGTCACGATGTTG+TGG + tig0018459:147910-147929 Msa1366600:CDS 40.0%
! TGATGGACGAATTACTATCG+AGG + tig0018459:147937-147956 Msa1366600:CDS 40.0%
ATCCTGATCATTCAAGACTC+CGG + tig0018459:147984-148003 Msa1366600:CDS 40.0%
! CCTCCCTATTTCTCTGAATA+AGG - tig0018459:148138-148157 None:intergenic 40.0%
CCTTATTCAGAGAAATAGGG+AGG + tig0018459:148135-148154 Msa1366600:CDS 40.0%
GAAGCTCATAAAAACGATGG+TGG + tig0018459:148289-148308 Msa1366600:CDS 40.0%
GAACCTGGAAAAAGACAATC+AGG - tig0018459:148419-148438 None:intergenic 40.0%
TAGCGGTAGTAAAAACACCA+TGG - tig0018459:148863-148882 None:intergenic 40.0%
!! GTTATTACATTGATGGCGGA+TGG - tig0018459:148893-148912 None:intergenic 40.0%
ATAACCAGGCTGCTAAATTG+CGG + tig0018459:149107-149126 Msa1366600:CDS 40.0%
AGAGTCTTCTCAGTTGGAAA+TGG + tig0018459:149225-149244 Msa1366600:CDS 40.0%
GCATATTCATTAGCAGCTTC+AGG - tig0018459:149253-149272 None:intergenic 40.0%
GACACAAACACAAAAGTCCA+TGG + tig0018459:149400-149419 Msa1366600:CDS 40.0%
GGTTTAGATAAGCAGGATGA+AGG + tig0018459:149444-149463 Msa1366600:CDS 40.0%
ACGAGGAACTGACTAGAAAA+AGG + tig0018459:149502-149521 Msa1366600:CDS 40.0%
ATCAGCAGCATTCTCATCAT+CGG - tig0018459:149574-149593 None:intergenic 40.0%
! ACAAAAGACACTAGAAGTGC+TGG + tig0018459:149635-149654 Msa1366600:CDS 40.0%
AGATGATGAAATGCCCAAGT+CGG + tig0018459:149662-149681 Msa1366600:CDS 40.0%
AAAGATAGCAATCCCGACTT+GGG - tig0018459:149678-149697 None:intergenic 40.0%
TAAAGATAGCAATCCCGACT+TGG - tig0018459:149679-149698 None:intergenic 40.0%
ATTAGTTACCCAACCTCTGA+TGG + tig0018459:149755-149774 Msa1366600:intron 40.0%
TCACCCTTTCCAGTATCAAT+AGG - tig0018459:149873-149892 None:intergenic 40.0%
GTGATCTCCAACTATGATGA+AGG + tig0018459:149889-149908 Msa1366600:intron 40.0%
TACCACAACAAATCAGATGG+AGG - tig0018459:150013-150032 None:intergenic 40.0%
TGAAGATTCCATGAAGAAGC+TGG + tig0018459:150101-150120 Msa1366600:CDS 40.0%
!! TGGCAGAAGAGTATTTGGAA+TGG + tig0018459:150167-150186 Msa1366600:CDS 40.0%
ATGGCTAAAGCCCAAACAAT+TGG + tig0018459:150186-150205 Msa1366600:CDS 40.0%
! TTACGATAACAGTGATAGCG+AGG + tig0018459:150239-150258 Msa1366600:CDS 40.0%
!!! CTCAATGTTGCCACTTTTCT+TGG - tig0018459:150277-150296 None:intergenic 40.0%
AAGTGGCAACATTGAGAATG+AGG + tig0018459:150281-150300 Msa1366600:CDS 40.0%
AGTGGCAACATTGAGAATGA+GGG + tig0018459:150282-150301 Msa1366600:CDS 40.0%
!!! TTCGTATGTAGTTTTTGGCC+CGG - tig0018459:150511-150530 None:intergenic 40.0%
! CCATGTATCTGAGGCAAATA+TGG - tig0018459:150538-150557 None:intergenic 40.0%
CCATATTTGCCTCAGATACA+TGG + tig0018459:150535-150554 Msa1366600:CDS 40.0%
TGCCTCAGATACATGGAAAA+AGG + tig0018459:150542-150561 Msa1366600:CDS 40.0%
!! TGATTTACTGATAATGGGGC+AGG + tig0018459:150654-150673 Msa1366600:intron 40.0%
GGGCAGGCAAAAAACAAAAA+TGG + tig0018459:150670-150689 Msa1366600:intron 40.0%
GATAGCGATACAGATGATGA+AGG + tig0018459:150857-150876 Msa1366600:CDS 40.0%
TACAGATGATGAAGGACAGA+TGG + tig0018459:150865-150884 Msa1366600:CDS 40.0%
TTCATGTTCTTTGACCATCC+AGG - tig0018459:151107-151126 None:intergenic 40.0%
AGCATCCTTTCTCTTCTTGA+GGG - tig0018459:151155-151174 None:intergenic 40.0%
! CTCTGAGAAATCAAGCAAGA+AGG + tig0018459:151195-151214 Msa1366600:CDS 40.0%
GACTATGTCGGAAATTGCAA+TGG + tig0018459:151285-151304 Msa1366600:intron 40.0%
TACCATATGTTGTTGCAGAG+TGG + tig0018459:151382-151401 Msa1366600:intron 40.0%
ACCATATGTTGTTGCAGAGT+GGG + tig0018459:151383-151402 Msa1366600:intron 40.0%
AAGTTTGGCAAAGATAACCC+TGG - tig0018459:151471-151490 None:intergenic 40.0%
GATCGACAATACTTCAGTGT+TGG + tig0018459:151758-151777 Msa1366600:intron 40.0%
! TGTCATGTTAGGTTGTTCTC+AGG + tig0018459:151910-151929 Msa1366600:intron 40.0%
CAAGTTAGAATCAGCTATGG+AGG - tig0018459:151950-151969 None:intergenic 40.0%
AACAGTACAGAAGACAATGG+TGG - tig0018459:152238-152257 None:intergenic 40.0%
TCTCAGTCAAGTTATTGTGC+CGG + tig0018459:152267-152286 Msa1366600:intron 40.0%
!!! GAAAAGGCACCGTTTTTGTT+TGG - tig0018459:152333-152352 None:intergenic 40.0%
CTACATTTGGACCTCTTACT+CGG + tig0018459:152422-152441 Msa1366600:CDS 40.0%
!! GATATACTTACGGGTTTTGG+AGG + tig0018459:152592-152611 Msa1366600:intron 40.0%
AAAGTCGAAGTTGAAGGTCA+AGG + tig0018459:152860-152879 Msa1366600:CDS 40.0%
AAGTCGAAGTTGAAGGTCAA+GGG + tig0018459:152861-152880 Msa1366600:CDS 40.0%
GGTCAAGGGAAAAAAGTAAG+TGG + tig0018459:152875-152894 Msa1366600:exon 40.0%
!! AATAGACCGATTTTGGTAGG+CGG + tig0018459:152989-153008 Msa1366600:three_prime_UTR 40.0%
TCCCTCGTTCTATTATCTCT+TGG - tig0018459:153028-153047 None:intergenic 40.0%
CGTTGAAGCAGAGAATGTGT+TGG - tig0018459:147154-147173 None:intergenic 45.0%
!!! ACTTCTTTTTTCCGGTGTGG+CGG - tig0018459:147229-147248 None:intergenic 45.0%
! CAATCTGATGATGACGACGA+CGG + tig0018459:147559-147578 Msa1366600:CDS 45.0%
GATCGTCACGAAGAGGATTA+AGG - tig0018459:147967-147986 None:intergenic 45.0%
AACCGGAGTCTTGAATGATC+AGG - tig0018459:147989-148008 None:intergenic 45.0%
TGTTCATGCACCACTTCCAA+AGG + tig0018459:148042-148061 Msa1366600:CDS 45.0%
ATCATGGACTCGGAATGCAT+GGG - tig0018459:148441-148460 None:intergenic 45.0%
AATCATGGACTCGGAATGCA+TGG - tig0018459:148442-148461 None:intergenic 45.0%
GAGGGGGAGATTAAATAGAG+AGG - tig0018459:148760-148779 None:intergenic 45.0%
!! ATTACATTGATGGCGGATGG+AGG - tig0018459:148890-148909 None:intergenic 45.0%
CATGAAACAAGAACGCCAGA+GGG + tig0018459:149273-149292 Msa1366600:CDS 45.0%
ACATATATACCTCAGCCCTC+TGG - tig0018459:149291-149310 None:intergenic 45.0%
! TGCATTTTACGCTGAAGCCA+TGG - tig0018459:149420-149439 None:intergenic 45.0%
CTTCAGCGTAAAATGCAACG+TGG + tig0018459:149423-149442 Msa1366600:CDS 45.0%
GCAACGTGGTTTAGATAAGC+AGG + tig0018459:149437-149456 Msa1366600:CDS 45.0%
!! GAATGCTGCTGATTCTGATC+CGG + tig0018459:149581-149600 Msa1366600:CDS 45.0%
!! TGCTGATTCTGATCCGGATA+AGG + tig0018459:149587-149606 Msa1366600:CDS 45.0%
!! AAAGACACTAGAAGTGCTGG+AGG + tig0018459:149638-149657 Msa1366600:CDS 45.0%
GATGATGAAATGCCCAAGTC+GGG + tig0018459:149663-149682 Msa1366600:CDS 45.0%
CCATAGTCTTTGTGGGCATT+AGG - tig0018459:149797-149816 None:intergenic 45.0%
CCTAATGCCCACAAAGACTA+TGG + tig0018459:149794-149813 Msa1366600:intron 45.0%
! TTTGTTGTGGTATAGAGGCG+TGG + tig0018459:150021-150040 Msa1366600:intron 45.0%
AGATTCCATGAAGAAGCTGG+AGG + tig0018459:150104-150123 Msa1366600:CDS 45.0%
AGAATCCTCCAGCTTCTTCA+TGG - tig0018459:150112-150131 None:intergenic 45.0%
AAGAAGCTGGAGGATTCTGA+TGG + tig0018459:150114-150133 Msa1366600:CDS 45.0%
CCACTGGTAGATGCTACTAT+TGG - tig0018459:150150-150169 None:intergenic 45.0%
CCAATAGTAGCATCTACCAG+TGG + tig0018459:150147-150166 Msa1366600:CDS 45.0%
!! ACCAGTGGCAGAAGAGTATT+TGG + tig0018459:150162-150181 Msa1366600:CDS 45.0%
TCCAAATACTCTTCTGCCAC+TGG - tig0018459:150166-150185 None:intergenic 45.0%
! TGATAGCGAGGATGACTTTG+AGG + tig0018459:150251-150270 Msa1366600:CDS 45.0%
!! GACTTTGAGGCCAAGAAAAG+TGG + tig0018459:150264-150283 Msa1366600:CDS 45.0%
!!! TCGTATGTAGTTTTTGGCCC+GGG - tig0018459:150510-150529 None:intergenic 45.0%
ACCTTTACATCGTGCCTAAC+AGG - tig0018459:150736-150755 None:intergenic 45.0%
AGATGATGAAGGACAGATGG+TGG + tig0018459:150868-150887 Msa1366600:CDS 45.0%
CATCTCAAGAGGAGCTCATT+CGG + tig0018459:150933-150952 Msa1366600:CDS 45.0%
! TCATTCGGCAAGCTTTTGCT+GGG + tig0018459:150948-150967 Msa1366600:CDS 45.0%
! GCTCGGGATTTTCTTCATTG+AGG - tig0018459:151015-151034 None:intergenic 45.0%
TAATAGAGGCTTCTCAGGCT+CGG - tig0018459:151032-151051 None:intergenic 45.0%
GAAAGGTTTACCATCCTGGA+TGG + tig0018459:151090-151109 Msa1366600:CDS 45.0%
TGTTCTTTGACCATCCAGGA+TGG - tig0018459:151103-151122 None:intergenic 45.0%
! GGCTTCTTCCCTTTTTCTCT+GGG - tig0018459:151134-151153 None:intergenic 45.0%
AGAAGCCCTCAAGAAGAGAA+AGG + tig0018459:151147-151166 Msa1366600:CDS 45.0%
GAGCATCCTTTCTCTTCTTG+AGG - tig0018459:151156-151175 None:intergenic 45.0%
TCCCACTCTGCAACAACATA+TGG - tig0018459:151387-151406 None:intergenic 45.0%
ATTCAGTTCCTCCAGCCAAA+TGG - tig0018459:151798-151817 None:intergenic 45.0%
TGTATGTTCGGTTCCACTTC+TGG + tig0018459:151849-151868 Msa1366600:intron 45.0%
GGGTTAGATTCAGGTCCAAT+GGG - tig0018459:152397-152416 None:intergenic 45.0%
CATTGGACCTGAATCTAACC+CGG + tig0018459:152396-152415 Msa1366600:CDS 45.0%
TCTAACCCGGCAACTACATT+TGG + tig0018459:152409-152428 Msa1366600:CDS 45.0%
AGAGGTCCAAATGTAGTTGC+CGG - tig0018459:152418-152437 None:intergenic 45.0%
! GGCTTTGCTATCATTGCCTT+TGG - tig0018459:152835-152854 None:intergenic 45.0%
AAGCTTCCGCCTACCAAAAT+CGG - tig0018459:152998-153017 None:intergenic 45.0%
!!! TTAATTTTTTTTTACTTTTT+CGG + tig0018459:148697-148716 Msa1366600:intron 5.0%
AGATGAAGGCAAACGAGGAC+CGG - tig0018459:147285-147304 None:intergenic 50.0%
TCATCAACATCGACAGGGGT+GGG - tig0018459:147335-147354 None:intergenic 50.0%
TTCATCAACATCGACAGGGG+TGG - tig0018459:147336-147355 None:intergenic 50.0%
! CTCTGATGATGATTCTGGGG+AGG + tig0018459:147618-147637 Msa1366600:CDS 50.0%
! AAAAGGCTTGCTCGGCATAC+CGG - tig0018459:147683-147702 None:intergenic 50.0%
! ATGCCGAGCAAGCCTTTTGA+TGG + tig0018459:147685-147704 Msa1366600:CDS 50.0%
TCTGCAGCAACAACAGCTAG+TGG - tig0018459:147775-147794 None:intergenic 50.0%
TCGTAGGCAATAAGAAGGCG+AGG + tig0018459:147846-147865 Msa1366600:intron 50.0%
CCTTCCACAACATCGTGACT+AGG - tig0018459:147917-147936 None:intergenic 50.0%
CCTAGTCACGATGTTGTGGA+AGG + tig0018459:147914-147933 Msa1366600:CDS 50.0%
CACGATGTTGTGGAAGGTGA+TGG + tig0018459:147920-147939 Msa1366600:CDS 50.0%
CGTCACGAAGAGGATTAAGG+AGG - tig0018459:147964-147983 None:intergenic 50.0%
TGATCAGGATCGTCACGAAG+AGG - tig0018459:147974-147993 None:intergenic 50.0%
! GCTTGATCTGCCTTTGGAAG+TGG - tig0018459:148055-148074 None:intergenic 50.0%
TCCAAAGGCAGATCAAGCGA+AGG + tig0018459:148057-148076 Msa1366600:CDS 50.0%
ACCTTCGCTTGATCTGCCTT+TGG - tig0018459:148061-148080 None:intergenic 50.0%
AAAGGCAGATCAAGCGAAGG+TGG + tig0018459:148060-148079 Msa1366600:CDS 50.0%
CAGATCAAGCGAAGGTGGAA+AGG + tig0018459:148065-148084 Msa1366600:CDS 50.0%
TCAAGCGAAGGTGGAAAGGA+AGG + tig0018459:148069-148088 Msa1366600:CDS 50.0%
! AACCTTGGCGGACATAACTG+AGG + tig0018459:148652-148671 Msa1366600:intron 50.0%
TGAGAAGGATGGGCATAACC+AGG + tig0018459:149093-149112 Msa1366600:CDS 50.0%
GAAGGCAGAGTCTTCTCAGT+TGG + tig0018459:149219-149238 Msa1366600:CDS 50.0%
! CCTCTGGCGTTCTTGTTTCA+TGG - tig0018459:149275-149294 None:intergenic 50.0%
CCATGAAACAAGAACGCCAG+AGG + tig0018459:149272-149291 Msa1366600:CDS 50.0%
ATCACTGCTGCTACTGTCCA+TGG - tig0018459:149532-149551 None:intergenic 50.0%
!! GGCCTCCATCTGATTTGTTG+TGG + tig0018459:150008-150027 Msa1366600:intron 50.0%
! TGTGGTATAGAGGCGTGGAT+TGG + tig0018459:150026-150045 Msa1366600:intron 50.0%
GGGAAGTGATCATCTGCAGA+AGG + tig0018459:150302-150321 Msa1366600:CDS 50.0%
GCCTGTTAGGCACGATGTAA+AGG + tig0018459:150732-150751 Msa1366600:CDS 50.0%
!! GATGAAGGACAGATGGTGGA+TGG + tig0018459:150872-150891 Msa1366600:CDS 50.0%
CGAATGAGCTCCTCTTGAGA+TGG - tig0018459:150935-150954 None:intergenic 50.0%
! CTCATTCGGCAAGCTTTTGC+TGG + tig0018459:150947-150966 Msa1366600:CDS 50.0%
! CATTCGGCAAGCTTTTGCTG+GGG + tig0018459:150949-150968 Msa1366600:CDS 50.0%
AATAGAGGCTTCTCAGGCTC+GGG - tig0018459:151031-151050 None:intergenic 50.0%
! GGGCTTCTTCCCTTTTTCTC+TGG - tig0018459:151135-151154 None:intergenic 50.0%
!!! TGCGTGTGCGTTTGGTTTTG+CGG - tig0018459:152181-152200 None:intergenic 50.0%
GTACAGAAGACAATGGTGGC+TGG - tig0018459:152234-152253 None:intergenic 50.0%
CAGAGTATGCGTATGCCCAT+TGG + tig0018459:152379-152398 Msa1366600:CDS 50.0%
! CGGGTTAGATTCAGGTCCAA+TGG - tig0018459:152398-152417 None:intergenic 50.0%
! GTAGTTGCCGGGTTAGATTC+AGG - tig0018459:152406-152425 None:intergenic 50.0%
GAGGTCCAAATGTAGTTGCC+GGG - tig0018459:152417-152436 None:intergenic 50.0%
CTTACTTCAGGCCGAGTAAG+AGG - tig0018459:152436-152455 None:intergenic 50.0%
CTCACGATAAACCAGAGCAG+CGG + tig0018459:152775-152794 Msa1366600:CDS 50.0%
CTAAACCTAGCGGCGTTGCT+AGG + tig0018459:147115-147134 Msa1366600:five_prime_UTR 55.0%
! TTTTCCGGTGTGGCGGTTGT+TGG - tig0018459:147222-147241 None:intergenic 55.0%
CAGGGGTGGGGTTTAAGTGT+TGG - tig0018459:147322-147341 None:intergenic 55.0%
CATCAACATCGACAGGGGTG+GGG - tig0018459:147334-147353 None:intergenic 55.0%
AGCGAAGGTGGAAAGGAAGG+TGG + tig0018459:148072-148091 Msa1366600:CDS 55.0%
ACTCGGAATGCATGGGAACC+TGG - tig0018459:148434-148453 None:intergenic 55.0%
CTCCTCAGTTATGTCCGCCA+AGG - tig0018459:148657-148676 None:intergenic 55.0%
! CTTGGCGGACATAACTGAGG+AGG + tig0018459:148655-148674 Msa1366600:intron 55.0%
! TGGCGGATGGAGGACAATAG+CGG - tig0018459:148880-148899 None:intergenic 55.0%
TCAGTCCATTGACCCCAACC+AGG - tig0018459:151058-151077 None:intergenic 55.0%
GTCTACGGCTCTACGCCATT+TGG + tig0018459:151780-151799 Msa1366600:intron 55.0%
CAAACGCACACGCACTCAGT+GGG + tig0018459:152187-152206 Msa1366600:intron 55.0%
AGACAATGGTGGCTGGCAAG+TGG - tig0018459:152227-152246 None:intergenic 55.0%
GTGCAGGTGGTGAAGAAACC+AGG + tig0018459:152714-152733 Msa1366600:intron 55.0%
! CGCTGCTCTGGTTTATCGTG+AGG - tig0018459:152777-152796 None:intergenic 55.0%
GTAGACCTAGCAACGCCGCT+AGG - tig0018459:147123-147142 None:intergenic 60.0%
GGCTCCGCAATTTAGCAGCC+TGG - tig0018459:149114-149133 None:intergenic 60.0%
ACAAGAACGCCAGAGGGCTG+AGG + tig0018459:149279-149298 Msa1366600:CDS 60.0%
ACGGCTCTACGCCATTTGGC+TGG + tig0018459:151784-151803 Msa1366600:intron 60.0%
GCTCTACGCCATTTGGCTGG+AGG + tig0018459:151787-151806 Msa1366600:intron 60.0%
CCACTGAGTGCGTGTGCGTT+TGG - tig0018459:152189-152208 None:intergenic 60.0%
CCAAACGCACACGCACTCAG+TGG + tig0018459:152186-152205 Msa1366600:intron 60.0%
ACACTCTGTTGCCGCTGCTC+TGG - tig0018459:152789-152808 None:intergenic 60.0%
GACGCCAACAACCGCCACAC+CGG + tig0018459:147215-147234 Msa1366600:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0018459 gene 147054 153288 147054 ID=Msa1366600;Name=Msa1366600
tig0018459 mRNA 147054 153288 147054 ID=Msa1366600-mRNA-1;Parent=Msa1366600;Name=Msa1366600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=131|1|1|1|1|1|11|395|893
tig0018459 exon 147054 147472 147054 ID=Msa1366600-mRNA-1:exon:15136;Parent=Msa1366600-mRNA-1
tig0018459 exon 147547 147706 147547 ID=Msa1366600-mRNA-1:exon:15137;Parent=Msa1366600-mRNA-1
tig0018459 exon 147852 148333 147852 ID=Msa1366600-mRNA-1:exon:15138;Parent=Msa1366600-mRNA-1
tig0018459 exon 149079 149300 149079 ID=Msa1366600-mRNA-1:exon:15139;Parent=Msa1366600-mRNA-1
tig0018459 exon 149384 149707 149384 ID=Msa1366600-mRNA-1:exon:15140;Parent=Msa1366600-mRNA-1
tig0018459 exon 150036 150389 150036 ID=Msa1366600-mRNA-1:exon:15141;Parent=Msa1366600-mRNA-1
tig0018459 exon 150483 150563 150483 ID=Msa1366600-mRNA-1:exon:15142;Parent=Msa1366600-mRNA-1
tig0018459 exon 150676 150753 150676 ID=Msa1366600-mRNA-1:exon:15143;Parent=Msa1366600-mRNA-1
tig0018459 exon 150830 151216 150830 ID=Msa1366600-mRNA-1:exon:15144;Parent=Msa1366600-mRNA-1
tig0018459 exon 152319 152450 152319 ID=Msa1366600-mRNA-1:exon:15145;Parent=Msa1366600-mRNA-1
tig0018459 exon 152720 153288 152720 ID=Msa1366600-mRNA-1:exon:15146;Parent=Msa1366600-mRNA-1
tig0018459 five_prime_UTR 147054 147184 147054 ID=Msa1366600-mRNA-1:five_prime_utr;Parent=Msa1366600-mRNA-1
tig0018459 CDS 147185 147472 147185 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 147547 147706 147547 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 147852 148333 147852 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 149079 149300 149079 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 149384 149707 149384 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 150036 150389 150036 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 150483 150563 150483 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 150676 150753 150676 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 150830 151216 150830 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 152319 152450 152319 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 CDS 152720 152893 152720 ID=Msa1366600-mRNA-1:cds;Parent=Msa1366600-mRNA-1
tig0018459 three_prime_UTR 152894 153288 152894 ID=Msa1366600-mRNA-1:three_prime_utr;Parent=Msa1366600-mRNA-1
Gene Sequence

>Msa1366600

ATGGCAGAGAAGAAGCGAAATGAAAGAGGCGACGCCAACAACCGCCACACCGGAAAAAAGAAGTCTAAGAAGACTTCCGACAATCAACGGAAGAAAACCGGTCCTCGTTTGCCTTCATCTTTGAAAAAAGAGATCCAACACTTAAACCCCACCCCTGTCGATGTTGATGAAATCGACAGTGATGTTTACGAATACGAAGAAGAACAACCTGAAGAAGAATCTAGAAAGAATAAGCGATACGACCCTGTCTCTGTCAATGATAATAATGACCTTTCTTCTGATTTCGAGGATGAGAATGTACAATCTGATGATGACGACGACGGCTATGATTTTATTGGAAAAAAGAGGAAGAAAATTGACTCTGATGATGATTCTGGGGAGGAAGATGATGAGAGACATGAAAGGATGTTACAACGAATTACCGGTATGCCGAGCAAGCCTTTTGATGGCAATAAGAAGGCGAGGAAGAATGATGTTATTCCGGAGCTATATCTAGAGTCTGAAAATAATCCTAGTCACGATGTTGTGGAAGGTGATGGACGAATTACTATCGAGGACCTCCTTAATCCTCTTCGTGACGATCCTGATCATTCAAGACTCCGGTTAAGAAATCAACAAATTGAGAATCGTTCTAGAACTGTTCATGCACCACTTCCAAAGGCAGATCAAGCGAAGGTGGAAAGGAAGGTGGCGTATGACATATCAAAGAAACAAGTCACAAAGTGGCAACCCCTTATTCAGAGAAATAGGGAGGCTCCTACTAAGTACTTTGATGAAAAGACAGATCTAGGGTTTTCAACTATAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTAAATTTGAGAGGAATATGGCTGCACTAGTTCATCATGACAAAATTATGGAAGCTCATAAAAACGATGGTGGTAGTCTTCTTGACATGAACAAGGTTTCTATAAAGGATGAGAAGGATGGGCATAACCAGGCTGCTAAATTGCGGAGCCTTCTTTTTCGTCATGAGATGAAGGCAAAACATGTTAAAAAGATTAAGTCCAAAACATATCATCGTCTGTTAAAGAAAGTTAGATTGAAGGCAGAGTCTTCTCAGTTGGAAATGGATCCTGAAGCTGCTAATGAATATGCCATGAAACAAGAACGCCAGAGGGCTGAGGAACGCATGACTCTGAGACACAAACACAAAAGTCCATGGCTTCAGCGTAAAATGCAACGTGGTTTAGATAAGCAGGATGAAGGAACTCGTGCTGCCGTGACTGAACATTTTCAAAGACACGAGGAACTGACTAGAAAAAGGAAAACCATGGACAGTAGCAGCAGTGATGATAGCACTTATGAAGATGCCGATGATGAGAATGCTGCTGATTCTGATCCGGATAAGGCAAACAAGATTTTGCGAAAAGCAAAACAAAAGACACTAGAAGTGCTGGAGGAAGATGATGAAATGCCCAAGTCGGGATTGCTATCTTTACCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAAGCAACTATTGAAGAAGTCAACCTTACTGTACAAGAATATGAAGATTCCATGAAGAAGCTGGAGGATTCTGATGGCTCAGAAGATCCAATAGTAGCATCTACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAGCCCAAACAATTGGTGCTGATAATAAGGTGGAATTAGATAAGTTTTACGATAACAGTGATAGCGAGGATGACTTTGAGGCCAAGAAAAGTGGCAACATTGAGAATGAGGGAAGTGATCATCTGCAGAAGGATGTCATCAATGATTCAGTTTTAAATCAAGAGAATATCAATACTCGCAAAGAATCTGTTTTTAAGAACTTTGATGAGATTGTAAAAAATCCCGGGCCAAAAACTACATACGAAGTTTCCATATTTGCCTCAGATACATGGAAAAAGGCAAAAAACAAAAATGGTATAGACACAGACATCAAGAAGTCTTCAAAGTTTAATAGGCCTGTTAGGCACGATGTAAAGAGCTCTGAAAAAGATCAATTGGGAGAGGATAGCGATACAGATGATGAAGGACAGATGGTGGATGGAATTCTGACTTCTGCATCTAAACCATCTTATGAACTTCCATCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCTGGGGATGATGTAGAAGATGATTTTGAAAAGGATAAGCAGGAGATCCTCAATGAAGAAAATCCCGAGCCTGAGAAGCCTCTATTACTTCCTGGTTGGGGTCAATGGACTGATATACAGCAAAAGAAAGGTTTACCATCCTGGATGGTCAAAGAACATGAAAGTTCCCAGAGAAAAAGGGAAGAAGCCCTCAAGAAGAGAAAGGATGCTCAGTTAAAAAATGTCATCATCTCTGAGAAATCAAGCAAGAAGGCCGAGAAACTCCAAACAAAAACGGTGCCTTTTCCTTATACTTCCAAAGATGTCTTTCATCAGAGTATGCGTATGCCCATTGGACCTGAATCTAACCCGGCAACTACATTTGGACCTCTTACTCGGCCTGAAGTGGTGAAGAAACCAGGTGTTATTATAAAACCGATAGAATTTGAGGAAGTGAATCCTCACGATAAACCAGAGCAGCGGCAACAGAGTGTTAAGAACAAGAAGTTGAATAGAACCAAAGGCAATGATAGCAAAGCCATAAAAAAGTCGAAGTTGAAGGTCAAGGGAAAAAAGTAA
Protein sequence

>Msa1366600

MAEKKRNERGDANNRHTGKKKSKKTSDNQRKKTGPRLPSSLKKEIQHLNPTPVDVDEIDSDVYEYEEEQPEEESRKNKRYDPVSVNDNNDLSSDFEDENVQSDDDDDGYDFIGKKRKKIDSDDDSGEEDDERHERMLQRITGMPSKPFDGNKKARKNDVIPELYLESENNPSHDVVEGDGRITIEDLLNPLRDDPDHSRLRLRNQQIENRSRTVHAPLPKADQAKVERKVAYDISKKQVTKWQPLIQRNREAPTKYFDEKTDLGFSTIGAIASEFEPRTKFERNMAALVHHDKIMEAHKNDGGSLLDMNKVSIKDEKDGHNQAAKLRSLLFRHEMKAKHVKKIKSKTYHRLLKKVRLKAESSQLEMDPEAANEYAMKQERQRAEERMTLRHKHKSPWLQRKMQRGLDKQDEGTRAAVTEHFQRHEELTRKRKTMDSSSSDDSTYEDADDENAADSDPDKANKILRKAKQKTLEVLEEDDEMPKSGLLSLPFMRRGLEKRKEATIEEVNLTVQEYEDSMKKLEDSDGSEDPIVASTSGRRVFGMAKAQTIGADNKVELDKFYDNSDSEDDFEAKKSGNIENEGSDHLQKDVINDSVLNQENINTRKESVFKNFDEIVKNPGPKTTYEVSIFASDTWKKAKNKNGIDTDIKKSSKFNRPVRHDVKSSEKDQLGEDSDTDDEGQMVDGILTSASKPSYELPSQEELIRQAFAGDDVEDDFEKDKQEILNEENPEPEKPLLLPGWGQWTDIQQKKGLPSWMVKEHESSQRKREEALKKRKDAQLKNVIISEKSSKKAEKLQTKTVPFPYTSKDVFHQSMRMPIGPESNPATTFGPLTRPEVVKKPGVIIKPIEFEEVNPHDKPEQRQQSVKNKKLNRTKGNDSKAIKKSKLKVKGKK*