AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419410 MtrunA17_Chr3g0118021 96.296 405 14 1 1 404 1 405 0.0 786
Msa0419410 MtrunA17_Chr1g0154431 47.656 128 58 4 282 404 82 205 7.48e-21 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419410 AT3G49080.1 63.356 292 92 5 123 404 144 430 1.48e-112 336
Msa0419410 AT1G74970.1 46.154 130 57 4 282 404 85 208 4.98e-23 96.7

Find 132 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGTCTGTTGTATT+AGG 0.134909 3_2:+67494343 Msa0419410:three_prime_UTR
GCCTGGTAACGGTAAATTTA+TGG 0.138790 3_2:+67491906 Msa0419410:CDS
GAAGAGGATGCTTTGTTTAA+AGG 0.164710 3_2:+67491133 Msa0419410:CDS
GTGAAAGGTGGTGGTGTTTC+AGG 0.217283 3_2:+67492039 Msa0419410:CDS
GGTGACTTGATTGCTGCTTC+TGG 0.228441 3_2:+67491637 Msa0419410:CDS
TTTCTTGCTTTGGCCTTTCC+AGG 0.232502 3_2:-67494043 None:intergenic
AATATTATATAATGAAAATT+TGG 0.269630 3_2:+67494329 Msa0419410:three_prime_UTR
ATAATATTCATTATGTAGTT+AGG 0.300349 3_2:-67494314 None:intergenic
AAATTTGGTCTGTTGTATTA+GGG 0.308221 3_2:+67494344 Msa0419410:three_prime_UTR
GATGGTGAAAGTGGTGATTT+TGG 0.309890 3_2:+67491181 Msa0419410:CDS
TTGTTGCTGGAGTAGGGTTT+TGG 0.316056 3_2:-67490914 None:intergenic
ACTTGTATTTATGTTTCAAT+TGG 0.328341 3_2:+67494421 Msa0419410:three_prime_UTR
GAGAAAGCGAAGGATGTAAG+AGG 0.337574 3_2:-67490828 None:intergenic
AGACAAAGACATTGGGGCTC+TGG 0.353840 3_2:+67492001 Msa0419410:CDS
CGGTGAAATGGGGATTGATT+GGG 0.359928 3_2:-67490886 None:intergenic
CTAAGTGCAGGCCGCAAATC+TGG 0.366420 3_2:-67493833 None:intergenic
GAGCTCATTGCTGTTCTTGA+AGG 0.367151 3_2:+67491382 Msa0419410:CDS
AAAATGGTGGTTAGAAGAAA+AGG 0.368505 3_2:+67491096 Msa0419410:CDS
TTCTCTGAGACAAAGACATT+GGG 0.370922 3_2:+67491994 Msa0419410:CDS
TTGAGTGTATGGAAGGATTT+CGG 0.378378 3_2:+67490962 Msa0419410:CDS
AAAGATCTTAAAGATGTTGA+TGG 0.382922 3_2:+67491697 Msa0419410:CDS
GAAGAAAGTGGAAATCTTGA+TGG 0.384461 3_2:+67491019 Msa0419410:CDS
TAATCAATGTTTGGATTTCA+AGG 0.391609 3_2:+67494192 Msa0419410:three_prime_UTR
AGAGGATGATGATGTGAGTA+AGG 0.404212 3_2:+67491285 Msa0419410:CDS
CAAATCCACCAGAGGTGAAA+TGG 0.404466 3_2:+67491771 Msa0419410:CDS
GCCACTAACTCGTGAAGTTT+AGG 0.405829 3_2:+67490625 Msa0419410:five_prime_UTR
CTTGTATTTATGTTTCAATT+GGG 0.407559 3_2:+67494422 Msa0419410:three_prime_UTR
GTGAGACAAGTAGATGATAA+AGG 0.408119 3_2:+67491829 Msa0419410:CDS
ACAAAGATCCGTTGAGTGTA+TGG 0.409756 3_2:+67490951 Msa0419410:CDS
GGCGACGTTGGCGGCGGCGT+AGG 0.413312 3_2:-67490668 None:intergenic
TGAAACACCACCACCTTTCA+CGG 0.413786 3_2:-67492037 None:intergenic
CACAAGTCCCCGATCGGAAT+GGG 0.416497 3_2:+67490603 Msa0419410:five_prime_UTR
TGGAATTTGAAAGAGGATAC+TGG 0.418798 3_2:+67491244 Msa0419410:CDS
TTTGTTTAAAGGAATTGATA+AGG 0.420765 3_2:+67491144 Msa0419410:CDS
ATGTGATGTTAATCAATGTT+TGG 0.421479 3_2:+67494183 Msa0419410:three_prime_UTR
ACGGTGAAATGGGGATTGAT+TGG 0.427409 3_2:-67490887 None:intergenic
TAGCAGGGCTTTGCAAAGTT+GGG 0.438793 3_2:+67493808 Msa0419410:CDS
GCAAGTTGGAGCTATACGTT+TGG 0.439544 3_2:+67493781 Msa0419410:CDS
TAAACGCTCCATTTCACCTC+TGG 0.442301 3_2:-67491779 None:intergenic
ATGCGCTATGAGAGGAATAC+TGG 0.445921 3_2:+67491748 Msa0419410:CDS
GACAAAGACATTGGGGCTCT+GGG 0.446637 3_2:+67492002 Msa0419410:CDS
TTAGCAGGGCTTTGCAAAGT+TGG 0.453242 3_2:+67493807 Msa0419410:CDS
GTGAAGGAGGGGAGAGAGTG+AGG 0.453262 3_2:+67491053 Msa0419410:CDS
ACCTAAACTTCACGAGTTAG+TGG 0.460484 3_2:-67490626 None:intergenic
AAAGGACGTGCCTATGGAAC+CGG 0.464161 3_2:+67491847 Msa0419410:CDS
GTTAGTGGCCCATTCCGATC+GGG 0.464787 3_2:-67490611 None:intergenic
GGGATGAATGAAGGTGAAGG+AGG 0.464929 3_2:+67491040 Msa0419410:CDS
AGGAGGGGAGAGAGTGAGGA+AGG 0.465845 3_2:+67491057 Msa0419410:CDS
CTATACGTTTGGGTATTAGC+AGG 0.467402 3_2:+67493792 Msa0419410:CDS
TAGTGAGAAATGAGTGTTGC+CGG 0.469100 3_2:-67490704 None:intergenic
TATCTGCTCCAACACCAATA+TGG 0.469968 3_2:-67491207 None:intergenic
CAAGTTGGAGCTATACGTTT+GGG 0.473428 3_2:+67493782 Msa0419410:CDS
TTGTCTCAGAGAAAGGTCTA+AGG 0.474986 3_2:-67491984 None:intergenic
GGATGAATGAAGGTGAAGGA+GGG 0.475747 3_2:+67491041 Msa0419410:CDS
ACGCTCCATTTCACCTCTGG+TGG 0.482192 3_2:-67491776 None:intergenic
CTCGTAATAACACAAATCTA+AGG 0.486161 3_2:-67494241 None:intergenic
ACTGCAGGAACGAAAGCTTT+TGG 0.489898 3_2:+67491616 Msa0419410:intron
CTACTCTTGAATCCCTTGTC+AGG 0.493764 3_2:-67494006 None:intergenic
GCTGACGGCGACGTTGGCGG+CGG 0.494831 3_2:-67490674 None:intergenic
GATGATAAAGGACGTGCCTA+TGG 0.496476 3_2:+67491841 Msa0419410:CDS
TTTGGTGACCATATTGGTGT+TGG 0.496594 3_2:+67491199 Msa0419410:CDS
GCGTTTAAAGCAAGAGGAAG+CGG 0.500853 3_2:+67491795 Msa0419410:CDS
CAGATAATGTTGATGAACCT+TGG 0.500891 3_2:+67491224 Msa0419410:CDS
AATGTCTTTGTCTCAGAGAA+AGG 0.501501 3_2:-67491991 None:intergenic
CCTCAAGATTTATATAATGA+TGG 0.501670 3_2:-67494483 None:intergenic
AAATGGTGGTTAGAAGAAAA+GGG 0.502327 3_2:+67491097 Msa0419410:CDS
ACCATAAATTTACCGTTACC+AGG 0.502617 3_2:-67491907 None:intergenic
AGAAAGCGAAGGATGTAAGA+GGG 0.503734 3_2:-67490827 None:intergenic
GGGAATTAAACGAGAAAGCA+TGG 0.511823 3_2:-67490798 None:intergenic
TGAAGTTTAAGAAATTATTG+AGG 0.521773 3_2:-67494139 None:intergenic
TGAACCTTGGAATTTGAAAG+AGG 0.523153 3_2:+67491237 Msa0419410:CDS
TTTCTCTGAGACAAAGACAT+TGG 0.523584 3_2:+67491993 Msa0419410:CDS
GGGATTCAAGAGTAGTAGAA+AGG 0.524223 3_2:+67494014 Msa0419410:CDS
GTATCCTCTTTCAAATTCCA+AGG 0.528823 3_2:-67491241 None:intergenic
TTCATACCACTTCTAAGTGC+AGG 0.531151 3_2:-67493845 None:intergenic
AAATTATTCGATGAAGAAAG+TGG 0.531395 3_2:+67491007 Msa0419410:CDS
TTCATGACAATAGGGCAAGT+TGG 0.534750 3_2:+67493767 Msa0419410:intron
AAAGCTGACGGCGACGTTGG+CGG 0.538561 3_2:-67490677 None:intergenic
AAGGAAACTGAGGTTAAAGA+TGG 0.540127 3_2:+67491163 Msa0419410:CDS
GCACAAGTCCCCGATCGGAA+TGG 0.540434 3_2:+67490602 Msa0419410:five_prime_UTR
GATCAGTCGGCTTCCTGACA+AGG 0.540941 3_2:+67493993 Msa0419410:intron
TTCTCACTATCACAACGAAA+AGG 0.543881 3_2:+67490718 Msa0419410:five_prime_UTR
GGTGAAATGGGGATTGATTG+GGG 0.545984 3_2:-67490885 None:intergenic
GAGAAAGCTGACGGCGACGT+TGG 0.546059 3_2:-67490680 None:intergenic
ACGTTGGCGGCGGCGTAGGA+AGG 0.552089 3_2:-67490664 None:intergenic
TAGCACGATGATCGAGCATA+GGG 0.554600 3_2:-67491957 None:intergenic
TTCTGAACCTCCTCTTGACT+CGG 0.562611 3_2:-67491340 None:intergenic
TATACGTTTGGGTATTAGCA+GGG 0.565628 3_2:+67493793 Msa0419410:CDS
GGGTATTGATAATGAAGAAG+AGG 0.566295 3_2:+67491117 Msa0419410:CDS
GCACGTGTGTGGGTTCAGCC+TGG 0.568099 3_2:+67491889 Msa0419410:CDS
TGGTGAGCTTAATGTTGTCG+AGG 0.568877 3_2:+67491315 Msa0419410:CDS
GGATGATGATGTGAGTAAGG+AGG 0.571155 3_2:+67491288 Msa0419410:CDS
TAAACTCTCAAGCATTTCGT+CGG 0.573331 3_2:-67491665 None:intergenic
GTAGCACGATGATCGAGCAT+AGG 0.575752 3_2:-67491958 None:intergenic
GATGAATGAAGGTGAAGGAG+GGG 0.576275 3_2:+67491042 Msa0419410:CDS
AATCTTGATGGGATGAATGA+AGG 0.577942 3_2:+67491031 Msa0419410:CDS
GTGTGGGTTCAGCCTGGTAA+CGG 0.579940 3_2:+67491895 Msa0419410:CDS
AGGAATTGATAAGGAAACTG+AGG 0.581256 3_2:+67491153 Msa0419410:CDS
TTGCGGCCTGCACTTAGAAG+TGG 0.583652 3_2:+67493839 Msa0419410:CDS
GAGGTTAAAGATGGTGAAAG+TGG 0.584687 3_2:+67491172 Msa0419410:CDS
AATGCAGTATAGCACGTGTG+TGG 0.584778 3_2:+67491878 Msa0419410:CDS
TTTGGAAACACGGTGAAATG+GGG 0.585018 3_2:-67490896 None:intergenic
AAGATCTTAAAGATGTTGAT+GGG 0.585151 3_2:+67491698 Msa0419410:CDS
AGTTAGTGGCCCATTCCGAT+CGG 0.585404 3_2:-67490612 None:intergenic
AATTGTACCGTGAAAGGTGG+TGG 0.586653 3_2:+67492030 Msa0419410:CDS
AAAGTTGGGAACCAGATTTG+CGG 0.586970 3_2:+67493822 Msa0419410:CDS
TGATGATGTGAGTAAGGAGG+AGG 0.588163 3_2:+67491291 Msa0419410:CDS
AGATCCGTTGAGTGTATGGA+AGG 0.589095 3_2:+67490955 Msa0419410:CDS
GGTGAGCTTAATGTTGTCGA+GGG 0.589292 3_2:+67491316 Msa0419410:CDS
ATCAGTCGGCTTCCTGACAA+GGG 0.591884 3_2:+67493994 Msa0419410:intron
ATGGAAGAGAGAGAAAGCGA+AGG 0.602824 3_2:-67490838 None:intergenic
GTCGCCGTCAGCTTTCTCTC+CGG 0.604644 3_2:+67490685 Msa0419410:five_prime_UTR
GGAGGTTCAGAAGCTTGAGA+AGG 0.611036 3_2:+67491351 Msa0419410:CDS
ATGCAGTATAGCACGTGTGT+GGG 0.611437 3_2:+67491879 Msa0419410:CDS
GATGTTAATTGTACCGTGAA+AGG 0.611552 3_2:+67492024 Msa0419410:CDS
AAGAAAGTGGAAATCTTGAT+GGG 0.619055 3_2:+67491020 Msa0419410:CDS
AAATCCTTCCATACACTCAA+CGG 0.620817 3_2:-67490959 None:intergenic
GTGAAATGGGGATTGATTGG+GGG 0.623151 3_2:-67490884 None:intergenic
GAAGGATTTCGGAGAAACAG+AGG 0.628489 3_2:+67490973 Msa0419410:CDS
TTTGTGCACAAGTCCCCGAT+CGG 0.632648 3_2:+67490597 Msa0419410:five_prime_UTR
CCATCATTATATAAATCTTG+AGG 0.636577 3_2:+67494483 Msa0419410:three_prime_UTR
CGAGGGTCCGAGTCAAGAGG+AGG 0.644556 3_2:+67491333 Msa0419410:CDS
AATGGAGCGTTTAAAGCAAG+AGG 0.646020 3_2:+67491789 Msa0419410:CDS
GATGTGAGTAAGGAGGAGGT+TGG 0.653294 3_2:+67491295 Msa0419410:CDS
TCTCTGAGACAAAGACATTG+GGG 0.653728 3_2:+67491995 Msa0419410:CDS
TTAGTGGCCCATTCCGATCG+GGG 0.657655 3_2:-67490610 None:intergenic
TGTCGAGGGTCCGAGTCAAG+AGG 0.658139 3_2:+67491330 Msa0419410:CDS
GTTGCCGGAGAGAAAGCTGA+CGG 0.666218 3_2:-67490689 None:intergenic
GATGGGATGAATGAAGGTGA+AGG 0.675149 3_2:+67491037 Msa0419410:CDS
GTTAATTGTACCGTGAAAGG+TGG 0.683961 3_2:+67492027 Msa0419410:CDS
GACGTGCCTATGGAACCGGA+AGG 0.727860 3_2:+67491851 Msa0419410:CDS
AATACTGGCAAATCCACCAG+AGG 0.729786 3_2:+67491763 Msa0419410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATTGAATATATTTTTTT+AGG + chr3_2:67492138-67492157 Msa0419410:intron 10.0%
!!! ATCTTTTTAGTTAAATTAAA+AGG + chr3_2:67494458-67494477 Msa0419410:three_prime_UTR 10.0%
!! TAACTTATTAAGCATTTATA+TGG + chr3_2:67492788-67492807 Msa0419410:intron 15.0%
!!! TTCATTTTTAAAATAAAAGC+AGG - chr3_2:67493242-67493261 None:intergenic 15.0%
!!! TTAATTTACTTGACATTTTT+TGG + chr3_2:67493511-67493530 Msa0419410:intron 15.0%
!!! ACATTTTTTGGTTTTATTTA+GGG + chr3_2:67493523-67493542 Msa0419410:intron 15.0%
!! ATAATATTCATTATGTAGTT+AGG - chr3_2:67494317-67494336 None:intergenic 15.0%
!! TTTGTTTAAAGGAATTGATA+AGG + chr3_2:67491144-67491163 Msa0419410:CDS 20.0%
!! AAAACTAGAAAAATCTTCAA+CGG - chr3_2:67491493-67491512 None:intergenic 20.0%
!!! TTCTAGTTTTAATTTGAATG+TGG + chr3_2:67491503-67491522 Msa0419410:intron 20.0%
!!! ATTTTTTCTATTTCACTAAG+AGG - chr3_2:67491730-67491749 None:intergenic 20.0%
!! AAGAAATTTATGCTAATGAT+AGG - chr3_2:67492117-67492136 None:intergenic 20.0%
!!! TTTTGTACTAAATAGTGTAT+TGG + chr3_2:67492290-67492309 Msa0419410:intron 20.0%
!! ATGAAAAATGAAAGAGATAA+AGG - chr3_2:67493144-67493163 None:intergenic 20.0%
!!! TATCTCTTTCATTTTTCATA+TGG + chr3_2:67493145-67493164 Msa0419410:intron 20.0%
!! TTTGAAAAATATGAACTCTA+AGG + chr3_2:67493478-67493497 Msa0419410:intron 20.0%
!!! GACATTTTTTGGTTTTATTT+AGG + chr3_2:67493522-67493541 Msa0419410:intron 20.0%
!! TTTAAATGTCAAAATTAGAG+AGG - chr3_2:67493562-67493581 None:intergenic 20.0%
!! TCTCTTTATTATTTGATTGT+TGG - chr3_2:67493634-67493653 None:intergenic 20.0%
!! TAAAAGACTAACATGAAAAA+AGG - chr3_2:67493907-67493926 None:intergenic 20.0%
!! TGAAGTTTAAGAAATTATTG+AGG - chr3_2:67494142-67494161 None:intergenic 20.0%
!!! GTGTAGTTATTTTTTGTTTT+TGG + chr3_2:67494395-67494414 Msa0419410:three_prime_UTR 20.0%
!! ACTTGTATTTATGTTTCAAT+TGG + chr3_2:67494421-67494440 Msa0419410:three_prime_UTR 20.0%
!! CTTGTATTTATGTTTCAATT+GGG + chr3_2:67494422-67494441 Msa0419410:three_prime_UTR 20.0%
! AAATTATTCGATGAAGAAAG+TGG + chr3_2:67491007-67491026 Msa0419410:CDS 25.0%
!!! AAGTTGATGATGAACAAAAA+TGG + chr3_2:67491080-67491099 Msa0419410:CDS 25.0%
! ATAACAAACTAACAACAGAA+GGG - chr3_2:67491420-67491439 None:intergenic 25.0%
! AATAACAAACTAACAACAGA+AGG - chr3_2:67491421-67491440 None:intergenic 25.0%
!!! TTAGTTTTAGACATTGTTGA+AGG + chr3_2:67491443-67491462 Msa0419410:intron 25.0%
! ATGAAACTGAATTATTGTCA+AGG + chr3_2:67491563-67491582 Msa0419410:intron 25.0%
! AAAGATCTTAAAGATGTTGA+TGG + chr3_2:67491697-67491716 Msa0419410:CDS 25.0%
! AAGATCTTAAAGATGTTGAT+GGG + chr3_2:67491698-67491717 Msa0419410:CDS 25.0%
!! TACTTTGGTAATTTGAGTTT+GGG + chr3_2:67492170-67492189 Msa0419410:intron 25.0%
! TACAAAACATTGTCAAATTG+CGG - chr3_2:67492277-67492296 None:intergenic 25.0%
!! TAAACCAGTGTTGTTAAATA+GGG - chr3_2:67492378-67492397 None:intergenic 25.0%
!!! TATTTAACAACACTGGTTTA+GGG + chr3_2:67492378-67492397 Msa0419410:intron 25.0%
!! CCTATGTTTTTCTTATTCAT+TGG - chr3_2:67492699-67492718 None:intergenic 25.0%
! CCAATGAATAAGAAAAACAT+AGG + chr3_2:67492696-67492715 Msa0419410:intron 25.0%
! AATAAGAAAAACATAGGAGA+GGG + chr3_2:67492702-67492721 Msa0419410:intron 25.0%
!!! TCTAAGACTAGTTTTTTTGT+TGG - chr3_2:67492871-67492890 None:intergenic 25.0%
!!! AGTACAGTTTTTAAGAACTA+AGG + chr3_2:67492955-67492974 Msa0419410:intron 25.0%
! AAAAATGAAAGTTCAGCATA+TGG - chr3_2:67493053-67493072 None:intergenic 25.0%
! AAATACAGGTTTCATTAGTT+CGG - chr3_2:67493302-67493321 None:intergenic 25.0%
! CATGTAAATGGAAGATATAA+GGG + chr3_2:67493397-67493416 Msa0419410:intron 25.0%
! CTTTATTATTTGATTGTTGG+TGG - chr3_2:67493631-67493650 None:intergenic 25.0%
! GTTGATTAAGATAATACGAA+GGG - chr3_2:67493738-67493757 None:intergenic 25.0%
!!! TTGAAAACTTTTTCTTGCTT+TGG - chr3_2:67494056-67494075 None:intergenic 25.0%
!! AAGCAAGAAAAAGTTTTCAA+TGG + chr3_2:67494056-67494075 Msa0419410:CDS 25.0%
!! AGCAAGAAAAAGTTTTCAAT+GGG + chr3_2:67494057-67494076 Msa0419410:CDS 25.0%
!!! GCATTTTTTGTTTGGAATTT+CGG + chr3_2:67494112-67494131 Msa0419410:three_prime_UTR 25.0%
! ATGTGATGTTAATCAATGTT+TGG + chr3_2:67494183-67494202 Msa0419410:three_prime_UTR 25.0%
! TAATCAATGTTTGGATTTCA+AGG + chr3_2:67494192-67494211 Msa0419410:three_prime_UTR 25.0%
! AAAATTTGGTCTGTTGTATT+AGG + chr3_2:67494343-67494362 Msa0419410:three_prime_UTR 25.0%
! AAATTTGGTCTGTTGTATTA+GGG + chr3_2:67494344-67494363 Msa0419410:three_prime_UTR 25.0%
! CCTCAAGATTTATATAATGA+TGG - chr3_2:67494486-67494505 None:intergenic 25.0%
! CCATCATTATATAAATCTTG+AGG + chr3_2:67494483-67494502 Msa0419410:three_prime_UTR 25.0%
!!! GTTATTGTTTTTGTTGTTGC+TGG - chr3_2:67490930-67490949 None:intergenic 30.0%
AAGAAAGTGGAAATCTTGAT+GGG + chr3_2:67491020-67491039 Msa0419410:CDS 30.0%
!! TTGATGATGAACAAAAATGG+TGG + chr3_2:67491083-67491102 Msa0419410:CDS 30.0%
AAAATGGTGGTTAGAAGAAA+AGG + chr3_2:67491096-67491115 Msa0419410:CDS 30.0%
AAATGGTGGTTAGAAGAAAA+GGG + chr3_2:67491097-67491116 Msa0419410:CDS 30.0%
!!! TGATGTTTTTGGTTTCAAAG+AGG + chr3_2:67491267-67491286 Msa0419410:CDS 30.0%
TAACAAACTAACAACAGAAG+GGG - chr3_2:67491419-67491438 None:intergenic 30.0%
TTTAGACATTGTTGAAGGTT+TGG + chr3_2:67491448-67491467 Msa0419410:intron 30.0%
! TTTTCTATTTCACTAAGAGG+TGG - chr3_2:67491727-67491746 None:intergenic 30.0%
CAAACTCAAATTACCAAAGT+AGG - chr3_2:67492171-67492190 None:intergenic 30.0%
! CTACTTTGGTAATTTGAGTT+TGG + chr3_2:67492169-67492188 Msa0419410:intron 30.0%
! ACTTTGGTAATTTGAGTTTG+GGG + chr3_2:67492171-67492190 Msa0419410:intron 30.0%
TTGTTAAATAGGGGTTATAG+CGG - chr3_2:67492368-67492387 None:intergenic 30.0%
! AAACCAGTGTTGTTAAATAG+GGG - chr3_2:67492377-67492396 None:intergenic 30.0%
! CTAAACCAGTGTTGTTAAAT+AGG - chr3_2:67492379-67492398 None:intergenic 30.0%
!! CTATTTAACAACACTGGTTT+AGG + chr3_2:67492377-67492396 Msa0419410:intron 30.0%
! ATTTTGTACTGTATCATGCA+TGG - chr3_2:67492474-67492493 None:intergenic 30.0%
ATGCATGATACAGTACAAAA+TGG + chr3_2:67492473-67492492 Msa0419410:intron 30.0%
CAAGTATTTGCTTAAGAGAT+TGG + chr3_2:67492612-67492631 Msa0419410:intron 30.0%
GAATAAGAAAAACATAGGAG+AGG + chr3_2:67492701-67492720 Msa0419410:intron 30.0%
ATAAGAAAAACATAGGAGAG+GGG + chr3_2:67492703-67492722 Msa0419410:intron 30.0%
ACACAGTTCTTCAAAGTAAA+CGG - chr3_2:67492983-67493002 None:intergenic 30.0%
ATTATTCACGACCAATGTAT+GGG - chr3_2:67493080-67493099 None:intergenic 30.0%
AATTATTCACGACCAATGTA+TGG - chr3_2:67493081-67493100 None:intergenic 30.0%
AAAAGTAGCTCACTTATTCT+TGG - chr3_2:67493195-67493214 None:intergenic 30.0%
TAAAACGATTGAAGTAAACG+AGG + chr3_2:67493266-67493285 Msa0419410:intron 30.0%
TATTCTAGCATGACAAATAC+AGG - chr3_2:67493316-67493335 None:intergenic 30.0%
ATTCATGAATGATATCGCAA+AGG - chr3_2:67493341-67493360 None:intergenic 30.0%
!! AGCTTTCTTTTATTTCGATC+AGG + chr3_2:67493365-67493384 Msa0419410:intron 30.0%
GCATGTAAATGGAAGATATA+AGG + chr3_2:67493396-67493415 Msa0419410:intron 30.0%
GGGAGAAAATATTTATGAAC+TGG + chr3_2:67493417-67493436 Msa0419410:intron 30.0%
ATACGAAGGGAAAAATGAAT+TGG - chr3_2:67493725-67493744 None:intergenic 30.0%
! CGTTGATTAAGATAATACGA+AGG - chr3_2:67493739-67493758 None:intergenic 30.0%
AAACCTGTTTCATGACAATA+GGG + chr3_2:67493759-67493778 Msa0419410:intron 30.0%
AGTTTAGTGATTCATCAATG+CGG - chr3_2:67493956-67493975 None:intergenic 30.0%
!!! GTTAAAAGAGCATCATTTTC+TGG + chr3_2:67494086-67494105 Msa0419410:exon 30.0%
CTCGTAATAACACAAATCTA+AGG - chr3_2:67494244-67494263 None:intergenic 30.0%
CTACACAAAAATAAGCAGAA+TGG - chr3_2:67494381-67494400 None:intergenic 30.0%
TTCTCACTATCACAACGAAA+AGG + chr3_2:67490718-67490737 Msa0419410:five_prime_UTR 35.0%
!!! AGGATGTAAGAGGGTTTTTT+GGG - chr3_2:67490821-67490840 None:intergenic 35.0%
!!! AAGGATGTAAGAGGGTTTTT+TGG - chr3_2:67490822-67490841 None:intergenic 35.0%
! ATTGGGGAAATTAGGGTTTT+TGG - chr3_2:67490864-67490883 None:intergenic 35.0%
!! TTTTGGAAACACGGTGAAAT+GGG - chr3_2:67490900-67490919 None:intergenic 35.0%
!!! TTTTTGTTGTTGCTGGAGTA+GGG - chr3_2:67490923-67490942 None:intergenic 35.0%
AAATCCTTCCATACACTCAA+CGG - chr3_2:67490962-67490981 None:intergenic 35.0%
TTGAGTGTATGGAAGGATTT+CGG + chr3_2:67490962-67490981 Msa0419410:CDS 35.0%
GAAGAAAGTGGAAATCTTGA+TGG + chr3_2:67491019-67491038 Msa0419410:CDS 35.0%
AATCTTGATGGGATGAATGA+AGG + chr3_2:67491031-67491050 Msa0419410:CDS 35.0%
!! GGGTATTGATAATGAAGAAG+AGG + chr3_2:67491117-67491136 Msa0419410:CDS 35.0%
!! GAAGAGGATGCTTTGTTTAA+AGG + chr3_2:67491133-67491152 Msa0419410:CDS 35.0%
AGGAATTGATAAGGAAACTG+AGG + chr3_2:67491153-67491172 Msa0419410:CDS 35.0%
AAGGAAACTGAGGTTAAAGA+TGG + chr3_2:67491163-67491182 Msa0419410:CDS 35.0%
! CAGATAATGTTGATGAACCT+TGG + chr3_2:67491224-67491243 Msa0419410:CDS 35.0%
TGAACCTTGGAATTTGAAAG+AGG + chr3_2:67491237-67491256 Msa0419410:CDS 35.0%
GTATCCTCTTTCAAATTCCA+AGG - chr3_2:67491244-67491263 None:intergenic 35.0%
TGGAATTTGAAAGAGGATAC+TGG + chr3_2:67491244-67491263 Msa0419410:CDS 35.0%
ATTTGAATGTGGAAGCTGAA+TGG + chr3_2:67491514-67491533 Msa0419410:intron 35.0%
!! AATGGAATTGAAAGGTGTTG+CGG + chr3_2:67491532-67491551 Msa0419410:intron 35.0%
! TTTTACTGTATTGTGACTGC+AGG + chr3_2:67491601-67491620 Msa0419410:intron 35.0%
TAAACTCTCAAGCATTTCGT+CGG - chr3_2:67491668-67491687 None:intergenic 35.0%
TAGAAAAAATGCGCTATGAG+AGG + chr3_2:67491740-67491759 Msa0419410:CDS 35.0%
GTGAGACAAGTAGATGATAA+AGG + chr3_2:67491829-67491848 Msa0419410:CDS 35.0%
! TATACTGCATTTTCTCCTTC+CGG - chr3_2:67491869-67491888 None:intergenic 35.0%
ACCATAAATTTACCGTTACC+AGG - chr3_2:67491910-67491929 None:intergenic 35.0%
AATGTCTTTGTCTCAGAGAA+AGG - chr3_2:67491994-67492013 None:intergenic 35.0%
!! TTTCTCTGAGACAAAGACAT+TGG + chr3_2:67491993-67492012 Msa0419410:CDS 35.0%
!! TTCTCTGAGACAAAGACATT+GGG + chr3_2:67491994-67492013 Msa0419410:CDS 35.0%
GATGTTAATTGTACCGTGAA+AGG + chr3_2:67492024-67492043 Msa0419410:CDS 35.0%
TATGCTAATGATAGGACTTC+AGG - chr3_2:67492109-67492128 None:intergenic 35.0%
! TTTAGGATGAATGCCTACTT+TGG + chr3_2:67492155-67492174 Msa0419410:intron 35.0%
TGTTAAATAGGGGTTATAGC+GGG - chr3_2:67492367-67492386 None:intergenic 35.0%
TAACCCCTATTTAACAACAC+TGG + chr3_2:67492371-67492390 Msa0419410:intron 35.0%
CAGTGAATCTACACATACAT+GGG - chr3_2:67492560-67492579 None:intergenic 35.0%
ATACTTGTCTGATGTATGCT+TGG - chr3_2:67492599-67492618 None:intergenic 35.0%
TAAGAAAAACATAGGAGAGG+GGG + chr3_2:67492704-67492723 Msa0419410:intron 35.0%
CACAGTTCTTCAAAGTAAAC+GGG - chr3_2:67492982-67493001 None:intergenic 35.0%
AATGAAAGTTCAGCATATGG+TGG - chr3_2:67493050-67493069 None:intergenic 35.0%
! CATTTTTCTACCCCATACAT+TGG + chr3_2:67493066-67493085 Msa0419410:intron 35.0%
TTATTCACGACCAATGTATG+GGG - chr3_2:67493079-67493098 None:intergenic 35.0%
ACATTGGTCGTGAATAATTG+TGG + chr3_2:67493082-67493101 Msa0419410:intron 35.0%
AGGAAGACTATGCATGTAAA+TGG + chr3_2:67493385-67493404 Msa0419410:intron 35.0%
GTTGAATATAAGCGCGTATT+TGG - chr3_2:67493606-67493625 None:intergenic 35.0%
GAAACCTGTTTCATGACAAT+AGG + chr3_2:67493758-67493777 Msa0419410:intron 35.0%
TATACGTTTGGGTATTAGCA+GGG + chr3_2:67493793-67493812 Msa0419410:CDS 35.0%
!!! TCATGTTAGTCTTTTACTCG+TGG + chr3_2:67493911-67493930 Msa0419410:intron 35.0%
TGTCCTCAAAATTGATCAGT+CGG + chr3_2:67493980-67493999 Msa0419410:intron 35.0%
GTAGTAGAAAGGAAAAAACC+TGG + chr3_2:67494025-67494044 Msa0419410:CDS 35.0%
AGAAAGGAAAAAACCTGGAA+AGG + chr3_2:67494030-67494049 Msa0419410:CDS 35.0%
!!! AAAGAGCATCATTTTCTGGA+TGG + chr3_2:67494090-67494109 Msa0419410:exon 35.0%
!!! TCTGGATGGCATTTTTTGTT+TGG + chr3_2:67494104-67494123 Msa0419410:three_prime_UTR 35.0%
ACCTAAACTTCACGAGTTAG+TGG - chr3_2:67490629-67490648 None:intergenic 40.0%
! TAGTGAGAAATGAGTGTTGC+CGG - chr3_2:67490707-67490726 None:intergenic 40.0%
GGGAATTAAACGAGAAAGCA+TGG - chr3_2:67490801-67490820 None:intergenic 40.0%
AGAAAGCGAAGGATGTAAGA+GGG - chr3_2:67490830-67490849 None:intergenic 40.0%
!! GGGAAATTAGGGTTTTTGGA+TGG - chr3_2:67490860-67490879 None:intergenic 40.0%
TTTGGAAACACGGTGAAATG+GGG - chr3_2:67490899-67490918 None:intergenic 40.0%
!!! GTTTTGGAAACACGGTGAAA+TGG - chr3_2:67490901-67490920 None:intergenic 40.0%
!!! GTTTTTGTTGTTGCTGGAGT+AGG - chr3_2:67490924-67490943 None:intergenic 40.0%
ACAAAGATCCGTTGAGTGTA+TGG + chr3_2:67490951-67490970 Msa0419410:CDS 40.0%
GAGGTTAAAGATGGTGAAAG+TGG + chr3_2:67491172-67491191 Msa0419410:CDS 40.0%
! GATGGTGAAAGTGGTGATTT+TGG + chr3_2:67491181-67491200 Msa0419410:CDS 40.0%
!! GGTGATTTTGGTGACCATAT+TGG + chr3_2:67491193-67491212 Msa0419410:CDS 40.0%
! TTTGGTGACCATATTGGTGT+TGG + chr3_2:67491199-67491218 Msa0419410:CDS 40.0%
TATCTGCTCCAACACCAATA+TGG - chr3_2:67491210-67491229 None:intergenic 40.0%
!! GAGGATACTGGTGATGTTTT+TGG + chr3_2:67491256-67491275 Msa0419410:CDS 40.0%
! AGAGGATGATGATGTGAGTA+AGG + chr3_2:67491285-67491304 Msa0419410:CDS 40.0%
! CATTGCTGTTCTTGAAGGTT+TGG + chr3_2:67491387-67491406 Msa0419410:intron 40.0%
GGAAGCTGAATGGAATTGAA+AGG + chr3_2:67491524-67491543 Msa0419410:intron 40.0%
! AATGGAGCGTTTAAAGCAAG+AGG + chr3_2:67491789-67491808 Msa0419410:CDS 40.0%
!! GCCTGGTAACGGTAAATTTA+TGG + chr3_2:67491906-67491925 Msa0419410:CDS 40.0%
TTGTCTCAGAGAAAGGTCTA+AGG - chr3_2:67491987-67492006 None:intergenic 40.0%
!! TCTCTGAGACAAAGACATTG+GGG + chr3_2:67491995-67492014 Msa0419410:CDS 40.0%
GTTAATTGTACCGTGAAAGG+TGG + chr3_2:67492027-67492046 Msa0419410:CDS 40.0%
GTTAAATAGGGGTTATAGCG+GGG - chr3_2:67492366-67492385 None:intergenic 40.0%
!! AACAACACTGGTTTAGGGTA+TGG + chr3_2:67492383-67492402 Msa0419410:intron 40.0%
CATGCATGTTTGACACTCAA+AGG + chr3_2:67492496-67492515 Msa0419410:intron 40.0%
TGAATCTACACATACATGGG+TGG - chr3_2:67492557-67492576 None:intergenic 40.0%
CCAGTGAATCTACACATACA+TGG - chr3_2:67492561-67492580 None:intergenic 40.0%
CCATGTATGTGTAGATTCAC+TGG + chr3_2:67492558-67492577 Msa0419410:intron 40.0%
GTATGTGTAGATTCACTGGT+TGG + chr3_2:67492562-67492581 Msa0419410:intron 40.0%
GGGTTAGAGTTAGAGACTAT+AGG + chr3_2:67492731-67492750 Msa0419410:intron 40.0%
TAGAGTTAGAGACTATAGGC+AGG + chr3_2:67492735-67492754 Msa0419410:intron 40.0%
AGAGTTAGAGACTATAGGCA+GGG + chr3_2:67492736-67492755 Msa0419410:intron 40.0%
AATGATCCAGATGCATCTCT+TGG + chr3_2:67492895-67492914 Msa0419410:intron 40.0%
AAAAGACCAAGAGATGCATC+TGG - chr3_2:67492904-67492923 None:intergenic 40.0%
TTGGTCGTGAATAATTGTGG+TGG + chr3_2:67493085-67493104 Msa0419410:intron 40.0%
CGTGAATAATTGTGGTGGTT+TGG + chr3_2:67493090-67493109 Msa0419410:intron 40.0%
!!! GTGAGCTACTTTTCTTCATG+TGG + chr3_2:67493202-67493221 Msa0419410:intron 40.0%
TTCATGTGGCATGATCAGTT+TGG + chr3_2:67493216-67493235 Msa0419410:intron 40.0%
AGAGCGTGCATAACAGAAAT+TGG + chr3_2:67493651-67493670 Msa0419410:intron 40.0%
TTGCCCTATTGTCATGAAAC+AGG - chr3_2:67493765-67493784 None:intergenic 40.0%
TTCATGACAATAGGGCAAGT+TGG + chr3_2:67493767-67493786 Msa0419410:intron 40.0%
! CAAGTTGGAGCTATACGTTT+GGG + chr3_2:67493782-67493801 Msa0419410:CDS 40.0%
CTATACGTTTGGGTATTAGC+AGG + chr3_2:67493792-67493811 Msa0419410:CDS 40.0%
AAAGTTGGGAACCAGATTTG+CGG + chr3_2:67493822-67493841 Msa0419410:CDS 40.0%
TTCATACCACTTCTAAGTGC+AGG - chr3_2:67493848-67493867 None:intergenic 40.0%
! AAGCCGACTGATCAATTTTG+AGG - chr3_2:67493986-67494005 None:intergenic 40.0%
GGGATTCAAGAGTAGTAGAA+AGG + chr3_2:67494014-67494033 Msa0419410:CDS 40.0%
! TACGAGTCATTCACGCTTTT+TGG + chr3_2:67494258-67494277 Msa0419410:three_prime_UTR 40.0%
GCCACTAACTCGTGAAGTTT+AGG + chr3_2:67490625-67490644 Msa0419410:five_prime_UTR 45.0%
GAGAAAGCGAAGGATGTAAG+AGG - chr3_2:67490831-67490850 None:intergenic 45.0%
ATGGAAGAGAGAGAAAGCGA+AGG - chr3_2:67490841-67490860 None:intergenic 45.0%
TTGGGGGATTGGGGAAATTA+GGG - chr3_2:67490871-67490890 None:intergenic 45.0%
ATTGGGGGATTGGGGAAATT+AGG - chr3_2:67490872-67490891 None:intergenic 45.0%
GTGAAATGGGGATTGATTGG+GGG - chr3_2:67490887-67490906 None:intergenic 45.0%
GGTGAAATGGGGATTGATTG+GGG - chr3_2:67490888-67490907 None:intergenic 45.0%
CGGTGAAATGGGGATTGATT+GGG - chr3_2:67490889-67490908 None:intergenic 45.0%
ACGGTGAAATGGGGATTGAT+TGG - chr3_2:67490890-67490909 None:intergenic 45.0%
!!! GGAGTAGGGTTTTGGAAACA+CGG - chr3_2:67490909-67490928 None:intergenic 45.0%
! TTGTTGCTGGAGTAGGGTTT+TGG - chr3_2:67490917-67490936 None:intergenic 45.0%
AGATCCGTTGAGTGTATGGA+AGG + chr3_2:67490955-67490974 Msa0419410:CDS 45.0%
GAAGGATTTCGGAGAAACAG+AGG + chr3_2:67490973-67490992 Msa0419410:CDS 45.0%
GATGGGATGAATGAAGGTGA+AGG + chr3_2:67491037-67491056 Msa0419410:CDS 45.0%
GGATGAATGAAGGTGAAGGA+GGG + chr3_2:67491041-67491060 Msa0419410:CDS 45.0%
GATGAATGAAGGTGAAGGAG+GGG + chr3_2:67491042-67491061 Msa0419410:CDS 45.0%
! GGATGATGATGTGAGTAAGG+AGG + chr3_2:67491288-67491307 Msa0419410:CDS 45.0%
! TGATGATGTGAGTAAGGAGG+AGG + chr3_2:67491291-67491310 Msa0419410:CDS 45.0%
TGGTGAGCTTAATGTTGTCG+AGG + chr3_2:67491315-67491334 Msa0419410:CDS 45.0%
GGTGAGCTTAATGTTGTCGA+GGG + chr3_2:67491316-67491335 Msa0419410:CDS 45.0%
TTCTGAACCTCCTCTTGACT+CGG - chr3_2:67491343-67491362 None:intergenic 45.0%
! GAGCTCATTGCTGTTCTTGA+AGG + chr3_2:67491382-67491401 Msa0419410:CDS 45.0%
! ACTGCAGGAACGAAAGCTTT+TGG + chr3_2:67491616-67491635 Msa0419410:intron 45.0%
ATGCGCTATGAGAGGAATAC+TGG + chr3_2:67491748-67491767 Msa0419410:CDS 45.0%
AATACTGGCAAATCCACCAG+AGG + chr3_2:67491763-67491782 Msa0419410:CDS 45.0%
CAAATCCACCAGAGGTGAAA+TGG + chr3_2:67491771-67491790 Msa0419410:CDS 45.0%
TAAACGCTCCATTTCACCTC+TGG - chr3_2:67491782-67491801 None:intergenic 45.0%
! GCGTTTAAAGCAAGAGGAAG+CGG + chr3_2:67491795-67491814 Msa0419410:CDS 45.0%
GATGATAAAGGACGTGCCTA+TGG + chr3_2:67491841-67491860 Msa0419410:CDS 45.0%
! TTTTCTCCTTCCGGTTCCAT+AGG - chr3_2:67491860-67491879 None:intergenic 45.0%
AATGCAGTATAGCACGTGTG+TGG + chr3_2:67491878-67491897 Msa0419410:CDS 45.0%
ATGCAGTATAGCACGTGTGT+GGG + chr3_2:67491879-67491898 Msa0419410:CDS 45.0%
TAGCACGATGATCGAGCATA+GGG - chr3_2:67491960-67491979 None:intergenic 45.0%
AATTGTACCGTGAAAGGTGG+TGG + chr3_2:67492030-67492049 Msa0419410:CDS 45.0%
TGAAACACCACCACCTTTCA+CGG - chr3_2:67492040-67492059 None:intergenic 45.0%
GCTATAGCACTGTTGAGTAG+CGG - chr3_2:67492244-67492263 None:intergenic 45.0%
GCTACTCAACAGTGCTATAG+CGG + chr3_2:67492243-67492262 Msa0419410:intron 45.0%
CATAGTGCATGCTACTCTTC+AGG + chr3_2:67492442-67492461 Msa0419410:intron 45.0%
AGAGACTATAGGCAGGGTAA+CGG + chr3_2:67492742-67492761 Msa0419410:intron 45.0%
TGCTCATTGTGATGCTTGCA+AGG + chr3_2:67493169-67493188 Msa0419410:intron 45.0%
! GCAAGTTGGAGCTATACGTT+TGG + chr3_2:67493781-67493800 Msa0419410:CDS 45.0%
TTAGCAGGGCTTTGCAAAGT+TGG + chr3_2:67493807-67493826 Msa0419410:CDS 45.0%
TAGCAGGGCTTTGCAAAGTT+GGG + chr3_2:67493808-67493827 Msa0419410:CDS 45.0%
CTACTCTTGAATCCCTTGTC+AGG - chr3_2:67494009-67494028 None:intergenic 45.0%
! TTTCTTGCTTTGGCCTTTCC+AGG - chr3_2:67494046-67494065 None:intergenic 45.0%
!! AATATTATATAATGAAAATT+TGG + chr3_2:67494329-67494348 Msa0419410:three_prime_UTR 5.0%
TTTGTGCACAAGTCCCCGAT+CGG + chr3_2:67490597-67490616 Msa0419410:five_prime_UTR 50.0%
AGTTAGTGGCCCATTCCGAT+CGG - chr3_2:67490615-67490634 None:intergenic 50.0%
TGGGGATTGATTGGGGGATT+GGG - chr3_2:67490881-67490900 None:intergenic 50.0%
ATGGGGATTGATTGGGGGAT+TGG - chr3_2:67490882-67490901 None:intergenic 50.0%
GGGATGAATGAAGGTGAAGG+AGG + chr3_2:67491040-67491059 Msa0419410:CDS 50.0%
GATGTGAGTAAGGAGGAGGT+TGG + chr3_2:67491295-67491314 Msa0419410:CDS 50.0%
GGAGGTTCAGAAGCTTGAGA+AGG + chr3_2:67491351-67491370 Msa0419410:CDS 50.0%
! GGTGACTTGATTGCTGCTTC+TGG + chr3_2:67491637-67491656 Msa0419410:CDS 50.0%
AAAGGACGTGCCTATGGAAC+CGG + chr3_2:67491847-67491866 Msa0419410:CDS 50.0%
GTAGCACGATGATCGAGCAT+AGG - chr3_2:67491961-67491980 None:intergenic 50.0%
AGACAAAGACATTGGGGCTC+TGG + chr3_2:67492001-67492020 Msa0419410:CDS 50.0%
GACAAAGACATTGGGGCTCT+GGG + chr3_2:67492002-67492021 Msa0419410:CDS 50.0%
! GTGAAAGGTGGTGGTGTTTC+AGG + chr3_2:67492039-67492058 Msa0419410:CDS 50.0%
! AGGTGGTGGTGTTTCAGGTA+TGG + chr3_2:67492044-67492063 Msa0419410:intron 50.0%
ATGGCGGCACTATAACGTAG+CGG - chr3_2:67492341-67492360 None:intergenic 50.0%
! TAGGGGTTATAGCGGGGTTA+TGG - chr3_2:67492360-67492379 None:intergenic 50.0%
ACACATACATGGGTGGATCG+TGG - chr3_2:67492550-67492569 None:intergenic 50.0%
AAACATAGGAGAGGGGGAGT+TGG + chr3_2:67492710-67492729 Msa0419410:intron 50.0%
AACATAGGAGAGGGGGAGTT+GGG + chr3_2:67492711-67492730 Msa0419410:intron 50.0%
GAGACTATAGGCAGGGTAAC+GGG + chr3_2:67492743-67492762 Msa0419410:intron 50.0%
AGACTATAGGCAGGGTAACG+GGG + chr3_2:67492744-67492763 Msa0419410:intron 50.0%
! ATCAGTCGGCTTCCTGACAA+GGG + chr3_2:67493994-67494013 Msa0419410:intron 50.0%
CACAAGTCCCCGATCGGAAT+GGG + chr3_2:67490603-67490622 Msa0419410:five_prime_UTR 55.0%
TTAGTGGCCCATTCCGATCG+GGG - chr3_2:67490613-67490632 None:intergenic 55.0%
GTTAGTGGCCCATTCCGATC+GGG - chr3_2:67490614-67490633 None:intergenic 55.0%
GTTGCCGGAGAGAAAGCTGA+CGG - chr3_2:67490692-67490711 None:intergenic 55.0%
GGGGATTGATTGGGGGATTG+GGG - chr3_2:67490880-67490899 None:intergenic 55.0%
ACGCTCCATTTCACCTCTGG+TGG - chr3_2:67491779-67491798 None:intergenic 55.0%
GTGTGGGTTCAGCCTGGTAA+CGG + chr3_2:67491895-67491914 Msa0419410:CDS 55.0%
TGGGGCAGTGTTGTCAATCG+TGG + chr3_2:67492189-67492208 Msa0419410:intron 55.0%
! GGGTTATAGCGGGGTTATGG+CGG - chr3_2:67492357-67492376 None:intergenic 55.0%
CTAAGTGCAGGCCGCAAATC+TGG - chr3_2:67493836-67493855 None:intergenic 55.0%
TTGCGGCCTGCACTTAGAAG+TGG + chr3_2:67493839-67493858 Msa0419410:CDS 55.0%
! GATCAGTCGGCTTCCTGACA+AGG + chr3_2:67493993-67494012 Msa0419410:intron 55.0%
GCACAAGTCCCCGATCGGAA+TGG + chr3_2:67490602-67490621 Msa0419410:five_prime_UTR 60.0%
AAAGCTGACGGCGACGTTGG+CGG - chr3_2:67490680-67490699 None:intergenic 60.0%
GAGAAAGCTGACGGCGACGT+TGG - chr3_2:67490683-67490702 None:intergenic 60.0%
GTCGCCGTCAGCTTTCTCTC+CGG + chr3_2:67490685-67490704 Msa0419410:five_prime_UTR 60.0%
GTGAAGGAGGGGAGAGAGTG+AGG + chr3_2:67491053-67491072 Msa0419410:CDS 60.0%
AGGAGGGGAGAGAGTGAGGA+AGG + chr3_2:67491057-67491076 Msa0419410:CDS 60.0%
TGTCGAGGGTCCGAGTCAAG+AGG + chr3_2:67491330-67491349 Msa0419410:CDS 60.0%
GACGTGCCTATGGAACCGGA+AGG + chr3_2:67491851-67491870 Msa0419410:CDS 60.0%
!! CAGGGTAACGGGGCAGAGAT+GGG + chr3_2:67492754-67492773 Msa0419410:intron 60.0%
!! ACGGGGCAGAGATGGGTTAC+TGG + chr3_2:67492761-67492780 Msa0419410:intron 60.0%
CGAGGGTCCGAGTCAAGAGG+AGG + chr3_2:67491333-67491352 Msa0419410:CDS 65.0%
GCACGTGTGTGGGTTCAGCC+TGG + chr3_2:67491889-67491908 Msa0419410:CDS 65.0%
!! GCAGGGTAACGGGGCAGAGA+TGG + chr3_2:67492753-67492772 Msa0419410:intron 65.0%
ACGTTGGCGGCGGCGTAGGA+AGG - chr3_2:67490667-67490686 None:intergenic 70.0%
GCTGACGGCGACGTTGGCGG+CGG - chr3_2:67490677-67490696 None:intergenic 75.0%
! GGCGACGTTGGCGGCGGCGT+AGG - chr3_2:67490671-67490690 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 67490558 67494506 67490558 ID=Msa0419410;Name=Msa0419410
chr3_2 mRNA 67490558 67494506 67490558 ID=Msa0419410-mRNA-1;Parent=Msa0419410;Name=Msa0419410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=242|1|1|1|1|1|4|416|404
chr3_2 exon 67490558 67491403 67490558 ID=Msa0419410-mRNA-1:exon:15699;Parent=Msa0419410-mRNA-1
chr3_2 exon 67491623 67492060 67491623 ID=Msa0419410-mRNA-1:exon:15700;Parent=Msa0419410-mRNA-1
chr3_2 exon 67493780 67493860 67493780 ID=Msa0419410-mRNA-1:exon:15701;Parent=Msa0419410-mRNA-1
chr3_2 exon 67493999 67494506 67493999 ID=Msa0419410-mRNA-1:exon:15702;Parent=Msa0419410-mRNA-1
chr3_2 five_prime_UTR 67490558 67490799 67490558 ID=Msa0419410-mRNA-1:five_prime_utr;Parent=Msa0419410-mRNA-1
chr3_2 CDS 67490800 67491403 67490800 ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1
chr3_2 CDS 67491623 67492060 67491623 ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1
chr3_2 CDS 67493780 67493860 67493780 ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1
chr3_2 CDS 67493999 67494090 67493999 ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1
chr3_2 three_prime_UTR 67494091 67494506 67494091 ID=Msa0419410-mRNA-1:three_prime_utr;Parent=Msa0419410-mRNA-1
Gene Sequence

>Msa0419410

ATGCTTTCTCGTTTAATTCCCAAAAAACCCTCTTACATCCTTCGCTTTCTCTCTCTTCCATCCAAAAACCCTAATTTCCCCAATCCCCCAATCAATCCCCATTTCACCGTGTTTCCAAAACCCTACTCCAGCAACAACAAAAACAATAACAACAAAGATCCGTTGAGTGTATGGAAGGATTTCGGAGAAACAGAGGAAAAATTCGACAAATTATTCGATGAAGAAAGTGGAAATCTTGATGGGATGAATGAAGGTGAAGGAGGGGAGAGAGTGAGGAAGGAAGTTGATGATGAACAAAAATGGTGGTTAGAAGAAAAGGGTATTGATAATGAAGAAGAGGATGCTTTGTTTAAAGGAATTGATAAGGAAACTGAGGTTAAAGATGGTGAAAGTGGTGATTTTGGTGACCATATTGGTGTTGGAGCAGATAATGTTGATGAACCTTGGAATTTGAAAGAGGATACTGGTGATGTTTTTGGTTTCAAAGAGGATGATGATGTGAGTAAGGAGGAGGTTGGTGAGCTTAATGTTGTCGAGGGTCCGAGTCAAGAGGAGGTTCAGAAGCTTGAGAAGGAAGAGAAAGAGCTCATTGCTGTTCTTGAAGGAACGAAAGCTTTTGGTGACTTGATTGCTGCTTCTGGAATCACCGACGAAATGCTTGAGAGTTTAATTGCGTTGAAAGATCTTAAAGATGTTGATGGGTTGCCACCTCTTAGTGAAATAGAAAAAATGCGCTATGAGAGGAATACTGGCAAATCCACCAGAGGTGAAATGGAGCGTTTAAAGCAAGAGGAAGCGGCGAAAGCTAGAGTGAGACAAGTAGATGATAAAGGACGTGCCTATGGAACCGGAAGGAGAAAATGCAGTATAGCACGTGTGTGGGTTCAGCCTGGTAACGGTAAATTTATGGTTAATGATAAAGAGTTTGACGTCTATTTCCCTATGCTCGATCATCGTGCTACTCTCCTTAGACCTTTCTCTGAGACAAAGACATTGGGGCTCTGGGATGTTAATTGTACCGTGAAAGGTGGTGGTGTTTCAGGGCAAGTTGGAGCTATACGTTTGGGTATTAGCAGGGCTTTGCAAAGTTGGGAACCAGATTTGCGGCCTGCACTTAGAAGTGTCGGCTTCCTGACAAGGGATTCAAGAGTAGTAGAAAGGAAAAAACCTGGAAAGGCCAAAGCAAGAAAAAGTTTTCAATGGGTCAAGCGTTAA

Protein sequence

>Msa0419410

MLSRLIPKKPSYILRFLSLPSKNPNFPNPPINPHFTVFPKPYSSNNKNNNNKDPLSVWKDFGETEEKFDKLFDEESGNLDGMNEGEGGERVRKEVDDEQKWWLEEKGIDNEEEDALFKGIDKETEVKDGESGDFGDHIGVGADNVDEPWNLKEDTGDVFGFKEDDDVSKEEVGELNVVEGPSQEEVQKLEKEEKELIAVLEGTKAFGDLIAASGITDEMLESLIALKDLKDVDGLPPLSEIEKMRYERNTGKSTRGEMERLKQEEAAKARVRQVDDKGRAYGTGRRKCSIARVWVQPGNGKFMVNDKEFDVYFPMLDHRATLLRPFSETKTLGLWDVNCTVKGGGVSGQVGAIRLGISRALQSWEPDLRPALRSVGFLTRDSRVVERKKPGKAKARKSFQWVKR*