Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0419410 | XP_013461035.1 | 96.296 | 405 | 14 | 1 | 1 | 404 | 1 | 405 | 0.0 | 786 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0419410 | sp|Q8L6Z4|RPS9M_ARATH | 63.356 | 292 | 92 | 5 | 123 | 404 | 144 | 430 | 1.45e-111 | 336 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0419410 | A0A072UZ40 | 96.296 | 405 | 14 | 1 | 1 | 404 | 1 | 405 | 0.0 | 786 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003720 | Msa0419410 | 0.812921 | 3.323563e-51 | -8.615850e-47 |
Msa0006110 | Msa0419410 | 0.804336 | 2.268449e-49 | -8.615850e-47 |
Msa0006380 | Msa0419410 | 0.801189 | 1.012671e-48 | -8.615850e-47 |
Msa0028420 | Msa0419410 | 0.810793 | 9.660997e-51 | -8.615850e-47 |
Msa0032090 | Msa0419410 | 0.808856 | 2.521591e-50 | -8.615850e-47 |
Msa0032430 | Msa0419410 | 0.838993 | 2.066241e-57 | -8.615850e-47 |
Msa0032920 | Msa0419410 | -0.808125 | 3.612144e-50 | -8.615850e-47 |
Msa0040690 | Msa0419410 | 0.814480 | 1.508304e-51 | -8.615850e-47 |
Msa0044090 | Msa0419410 | 0.805015 | 1.636890e-49 | -8.615850e-47 |
Msa0052680 | Msa0419410 | 0.800062 | 1.718641e-48 | -8.615850e-47 |
Msa0054480 | Msa0419410 | 0.809412 | 1.916396e-50 | -8.615850e-47 |
Msa0079380 | Msa0419410 | 0.811555 | 6.601958e-51 | -8.615850e-47 |
Msa0081090 | Msa0419410 | 0.851839 | 6.830762e-61 | -8.615850e-47 |
Msa0084380 | Msa0419410 | 0.803450 | 3.465836e-49 | -8.615850e-47 |
Msa0090360 | Msa0419410 | 0.800958 | 1.128960e-48 | -8.615850e-47 |
Msa0092790 | Msa0419410 | 0.817450 | 3.277525e-52 | -8.615850e-47 |
Msa0115400 | Msa0419410 | 0.819476 | 1.138175e-52 | -8.615850e-47 |
Msa0124060 | Msa0419410 | 0.851615 | 7.908934e-61 | -8.615850e-47 |
Msa0146280 | Msa0419410 | 0.802663 | 5.042787e-49 | -8.615850e-47 |
Msa0168500 | Msa0419410 | 0.819655 | 1.036285e-52 | -8.615850e-47 |
Msa0169310 | Msa0419410 | 0.801548 | 8.550200e-49 | -8.615850e-47 |
Msa0172070 | Msa0419410 | 0.831443 | 1.664649e-55 | -8.615850e-47 |
Msa0211150 | Msa0419410 | 0.818484 | 1.913630e-52 | -8.615850e-47 |
Msa0229230 | Msa0419410 | 0.815640 | 8.336410e-52 | -8.615850e-47 |
Msa0231650 | Msa0419410 | 0.803584 | 3.251554e-49 | -8.615850e-47 |
Msa0371320 | Msa0419410 | 0.824442 | 8.054548e-54 | -8.615850e-47 |
Msa0378720 | Msa0419410 | 0.804699 | 1.906022e-49 | -8.615850e-47 |
Msa0385580 | Msa0419410 | 0.803820 | 2.904141e-49 | -8.615850e-47 |
Msa0390730 | Msa0419410 | 0.806053 | 9.914039e-50 | -8.615850e-47 |
Msa0392510 | Msa0419410 | 0.803285 | 3.750713e-49 | -8.615850e-47 |
Msa0393280 | Msa0419410 | 0.803971 | 2.702362e-49 | -8.615850e-47 |
Msa0419410 | Msa0428080 | 0.805851 | 1.093143e-49 | -8.615850e-47 |
Msa0419410 | Msa0430750 | 0.804420 | 2.178433e-49 | -8.615850e-47 |
Msa0419410 | Msa0452710 | 0.833239 | 5.978673e-56 | -8.615850e-47 |
Msa0419410 | Msa0455760 | 0.807864 | 4.103663e-50 | -8.615850e-47 |
Msa0419410 | Msa0463650 | 0.822399 | 2.419069e-53 | -8.615850e-47 |
Msa0419410 | Msa0464680 | 0.810101 | 1.362478e-50 | -8.615850e-47 |
Msa0419410 | Msa0467490 | 0.820499 | 6.641763e-53 | -8.615850e-47 |
Msa0419410 | Msa0481530 | 0.816190 | 6.282872e-52 | -8.615850e-47 |
Msa0419410 | Msa0498060 | 0.802665 | 5.037067e-49 | -8.615850e-47 |
Msa0419410 | Msa0529890 | 0.839092 | 1.948052e-57 | -8.615850e-47 |
Msa0419410 | Msa0531180 | 0.823741 | 1.176156e-53 | -8.615850e-47 |
Msa0419410 | Msa0546680 | 0.809513 | 1.823028e-50 | -8.615850e-47 |
Msa0419410 | Msa0557070 | 0.801986 | 6.951183e-49 | -8.615850e-47 |
Msa0419410 | Msa0569200 | 0.839138 | 1.895907e-57 | -8.615850e-47 |
Msa0419410 | Msa0572840 | 0.804050 | 2.601927e-49 | -8.615850e-47 |
Msa0419410 | Msa0585560 | 0.830862 | 2.312247e-55 | -8.615850e-47 |
Msa0419410 | Msa0610840 | -0.803418 | 3.519730e-49 | -8.615850e-47 |
Msa0419410 | Msa0615710 | 0.835691 | 1.447791e-56 | -8.615850e-47 |
Msa0419410 | Msa0617640 | 0.803735 | 3.025387e-49 | -8.615850e-47 |
Msa0419410 | Msa0625720 | 0.838282 | 3.154151e-57 | -8.615850e-47 |
Msa0419410 | Msa0626630 | 0.809391 | 1.936779e-50 | -8.615850e-47 |
Msa0419410 | Msa0639430 | 0.807749 | 4.341275e-50 | -8.615850e-47 |
Msa0419410 | Msa0663390 | 0.823730 | 1.183369e-53 | -8.615850e-47 |
Msa0419410 | Msa0681250 | 0.804191 | 2.431599e-49 | -8.615850e-47 |
Msa0419410 | Msa0681270 | 0.816611 | 5.058336e-52 | -8.615850e-47 |
Msa0419410 | Msa0682330 | 0.812729 | 3.661237e-51 | -8.615850e-47 |
Msa0419410 | Msa0689260 | 0.822042 | 2.927373e-53 | -8.615850e-47 |
Msa0419410 | Msa0707250 | 0.800250 | 1.573876e-48 | -8.615850e-47 |
Msa0419410 | Msa0711780 | 0.816453 | 5.486205e-52 | -8.615850e-47 |
Msa0419410 | Msa0715700 | 0.834812 | 2.414340e-56 | -8.615850e-47 |
Msa0419410 | Msa0736960 | 0.828095 | 1.087300e-54 | -8.615850e-47 |
Msa0419410 | Msa0741840 | 0.800496 | 1.402609e-48 | -8.615850e-47 |
Msa0419410 | Msa0765240 | 0.821324 | 4.289769e-53 | -8.615850e-47 |
Msa0419410 | Msa0765910 | 0.813680 | 2.264264e-51 | -8.615850e-47 |
Msa0419410 | Msa0780270 | 0.808633 | 2.814030e-50 | -8.615850e-47 |
Msa0419410 | Msa0793800 | 0.806794 | 6.918414e-50 | -8.615850e-47 |
Msa0419410 | Msa0796530 | 0.801498 | 8.753702e-49 | -8.615850e-47 |
Msa0419410 | Msa0828560 | 0.810765 | 9.797515e-51 | -8.615850e-47 |
Msa0419410 | Msa0832340 | 0.802817 | 4.686330e-49 | -8.615850e-47 |
Msa0419410 | Msa0861510 | 0.812840 | 3.463047e-51 | -8.615850e-47 |
Msa0419410 | Msa0861600 | 0.818231 | 2.183874e-52 | -8.615850e-47 |
Msa0419410 | Msa0861850 | 0.804219 | 2.398853e-49 | -8.615850e-47 |
Msa0419410 | Msa0866520 | 0.814884 | 1.227179e-51 | -8.615850e-47 |
Msa0419410 | Msa0876190 | 0.832644 | 8.402580e-56 | -8.615850e-47 |
Msa0419410 | Msa0944700 | 0.802799 | 4.726629e-49 | -8.615850e-47 |
Msa0419410 | Msa0945110 | 0.813622 | 2.332039e-51 | -8.615850e-47 |
Msa0419410 | Msa0966400 | 0.804690 | 1.914251e-49 | -8.615850e-47 |
Msa0419410 | Msa0997970 | 0.802225 | 6.207695e-49 | -8.615850e-47 |
Msa0419410 | Msa1006840 | 0.804019 | 2.641145e-49 | -8.615850e-47 |
Msa0419410 | Msa1020670 | 0.806248 | 9.022310e-50 | -8.615850e-47 |
Msa0419410 | Msa1051830 | 0.815324 | 9.798039e-52 | -8.615850e-47 |
Msa0419410 | Msa1051880 | 0.801681 | 8.028808e-49 | -8.615850e-47 |
Msa0419410 | Msa1078170 | 0.810170 | 1.316825e-50 | -8.615850e-47 |
Msa0419410 | Msa1103990 | 0.807439 | 5.051106e-50 | -8.615850e-47 |
Msa0419410 | Msa1106700 | 0.806661 | 7.380140e-50 | -8.615850e-47 |
Msa0419410 | Msa1109680 | 0.803990 | 2.678180e-49 | -8.615850e-47 |
Msa0419410 | Msa1123380 | 0.830948 | 2.202536e-55 | -8.615850e-47 |
Msa0419410 | Msa1128600 | 0.838273 | 3.170695e-57 | -8.615850e-47 |
Msa0419410 | Msa1132840 | 0.801538 | 8.588357e-49 | -8.615850e-47 |
Msa0419410 | Msa1135470 | 0.812054 | 5.142804e-51 | -8.615850e-47 |
Msa0419410 | Msa1145810 | 0.803825 | 2.898041e-49 | -8.615850e-47 |
Msa0419410 | Msa1155170 | -0.806126 | 9.570256e-50 | -8.615850e-47 |
Msa0419410 | Msa1167340 | 0.804742 | 1.866975e-49 | -8.615850e-47 |
Msa0419410 | Msa1173100 | 0.812290 | 4.566728e-51 | -8.615850e-47 |
Msa0419410 | Msa1181250 | 0.802155 | 6.414083e-49 | -8.615850e-47 |
Msa0419410 | Msa1181910 | 0.816548 | 5.225375e-52 | -8.615850e-47 |
Msa0419410 | Msa1189070 | 0.817260 | 3.615391e-52 | -8.615850e-47 |
Msa0419410 | Msa1190920 | 0.805344 | 1.397008e-49 | -8.615850e-47 |
Msa0419410 | Msa1193290 | 0.812205 | 4.766935e-51 | -8.615850e-47 |
Msa0419410 | Msa1199570 | 0.816651 | 4.954212e-52 | -8.615850e-47 |
Msa0419410 | Msa1203710 | 0.812477 | 4.157423e-51 | -8.615850e-47 |
Msa0419410 | Msa1205280 | 0.806568 | 7.723360e-50 | -8.615850e-47 |
Msa0419410 | Msa1208880 | 0.821382 | 4.160232e-53 | -8.615850e-47 |
Msa0419410 | Msa1221060 | 0.824158 | 9.392765e-54 | -8.615850e-47 |
Msa0419410 | Msa1228200 | 0.824458 | 7.985702e-54 | -8.615850e-47 |
Msa0419410 | Msa1229500 | 0.810292 | 1.239177e-50 | -8.615850e-47 |
Msa0419410 | Msa1245930 | 0.823217 | 1.559546e-53 | -8.615850e-47 |
Msa0419410 | Msa1259060 | 0.814127 | 1.804756e-51 | -8.615850e-47 |
Msa0419410 | Msa1271990 | 0.803038 | 4.217192e-49 | -8.615850e-47 |
Msa0419410 | Msa1284550 | 0.804315 | 2.291925e-49 | -8.615850e-47 |
Msa0419410 | Msa1294820 | 0.816102 | 6.575239e-52 | -8.615850e-47 |
Msa0419410 | Msa1297230 | 0.816828 | 4.522160e-52 | -8.615850e-47 |
Msa0419410 | Msa1303240 | 0.805438 | 1.334608e-49 | -8.615850e-47 |
Msa0419410 | Msa1309030 | 0.808755 | 2.650439e-50 | -8.615850e-47 |
Msa0419410 | Msa1314650 | 0.817269 | 3.599152e-52 | -8.615850e-47 |
Msa0419410 | Msa1324080 | 0.812571 | 3.964612e-51 | -8.615850e-47 |
Msa0419410 | Msa1328710 | 0.823312 | 1.482303e-53 | -8.615850e-47 |
Msa0419410 | Msa1332760 | 0.813412 | 2.593068e-51 | -8.615850e-47 |
Msa0419410 | Msa1333480 | 0.817042 | 4.047443e-52 | -8.615850e-47 |
Msa0419410 | Msa1343430 | 0.801418 | 9.088025e-49 | -8.615850e-47 |
Msa0419410 | Msa1353980 | 0.821618 | 3.669337e-53 | -8.615850e-47 |
Msa0419410 | Msa1358250 | 0.821496 | 3.914306e-53 | -8.615850e-47 |
Msa0419410 | Msa1361410 | 0.820890 | 5.399518e-53 | -8.615850e-47 |
Msa0419410 | Msa1366600 | 0.803661 | 3.133624e-49 | -8.615850e-47 |
Msa0419410 | Msa1368430 | 0.800185 | 1.622377e-48 | -8.615850e-47 |
Msa0419410 | Msa1372230 | 0.804976 | 1.668013e-49 | -8.615850e-47 |
Msa0419410 | Msa1374060 | 0.806054 | 9.910881e-50 | -8.615850e-47 |
Msa0419410 | Msa1381350 | 0.806561 | 7.750605e-50 | -8.615850e-47 |
Msa0419410 | Msa1382560 | 0.820276 | 7.471227e-53 | -8.615850e-47 |
Msa0419410 | Msa1392780 | 0.832692 | 8.175881e-56 | -8.615850e-47 |
Msa0419410 | Msa1394290 | 0.811270 | 7.613577e-51 | -8.615850e-47 |
Msa0419410 | Msa1400580 | 0.810041 | 1.403499e-50 | -8.615850e-47 |
Msa0419410 | Msa1406430 | 0.806591 | 7.635721e-50 | -8.615850e-47 |
Msa0419410 | Msa1423350 | 0.818780 | 1.639436e-52 | -8.615850e-47 |
Msa0419410 | Msa1425880 | 0.807976 | 3.884414e-50 | -8.615850e-47 |
Msa0419410 | Msa1432420 | 0.801011 | 1.101074e-48 | -8.615850e-47 |
Msa0419410 | Msa1437180 | 0.821178 | 4.635125e-53 | -8.615850e-47 |
Msa0419410 | Msa1440880 | 0.802095 | 6.601542e-49 | -8.615850e-47 |
Msa0419410 | Msa1443300 | 0.804122 | 2.513673e-49 | -8.615850e-47 |
Msa0419410 | Msa1451160 | 0.827408 | 1.590158e-54 | -8.615850e-47 |
Msa0419410 | Msa1457910 | 0.805918 | 1.058512e-49 | -8.615850e-47 |
Msa0419410 | Msa1466540 | 0.819656 | 1.035908e-52 | -8.615850e-47 |
Msa0240900 | Msa0419410 | 0.816888 | 4.383895e-52 | -8.615850e-47 |
Msa0254790 | Msa0419410 | 0.802027 | 6.817332e-49 | -8.615850e-47 |
Msa0271530 | Msa0419410 | 0.818160 | 2.265373e-52 | -8.615850e-47 |
Msa0307850 | Msa0419410 | 0.812545 | 4.017504e-51 | -8.615850e-47 |
Msa0326480 | Msa0419410 | 0.802003 | 6.893413e-49 | -8.615850e-47 |
Msa0335730 | Msa0419410 | 0.805057 | 1.603764e-49 | -8.615850e-47 |
Msa0337700 | Msa0419410 | 0.810964 | 8.868763e-51 | -8.615850e-47 |
Msa0340470 | Msa0419410 | 0.805325 | 1.409757e-49 | -8.615850e-47 |
Msa0342310 | Msa0419410 | 0.803075 | 4.144254e-49 | -8.615850e-47 |
Msa0357900 | Msa0419410 | 0.801945 | 7.085029e-49 | -8.615850e-47 |
Msa0358890 | Msa0419410 | 0.802505 | 5.433802e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0419410 | MtrunA17_Chr3g0118021 | 96.296 | 405 | 14 | 1 | 1 | 404 | 1 | 405 | 0.0 | 786 |
Msa0419410 | MtrunA17_Chr1g0154431 | 47.656 | 128 | 58 | 4 | 282 | 404 | 82 | 205 | 7.48e-21 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0419410 | AT3G49080.1 | 63.356 | 292 | 92 | 5 | 123 | 404 | 144 | 430 | 1.48e-112 | 336 |
Msa0419410 | AT1G74970.1 | 46.154 | 130 | 57 | 4 | 282 | 404 | 85 | 208 | 4.98e-23 | 96.7 |
Find 132 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAATTTGGTCTGTTGTATT+AGG | 0.134909 | 3_2:+67494343 | Msa0419410:three_prime_UTR |
GCCTGGTAACGGTAAATTTA+TGG | 0.138790 | 3_2:+67491906 | Msa0419410:CDS |
GAAGAGGATGCTTTGTTTAA+AGG | 0.164710 | 3_2:+67491133 | Msa0419410:CDS |
GTGAAAGGTGGTGGTGTTTC+AGG | 0.217283 | 3_2:+67492039 | Msa0419410:CDS |
GGTGACTTGATTGCTGCTTC+TGG | 0.228441 | 3_2:+67491637 | Msa0419410:CDS |
TTTCTTGCTTTGGCCTTTCC+AGG | 0.232502 | 3_2:-67494043 | None:intergenic |
AATATTATATAATGAAAATT+TGG | 0.269630 | 3_2:+67494329 | Msa0419410:three_prime_UTR |
ATAATATTCATTATGTAGTT+AGG | 0.300349 | 3_2:-67494314 | None:intergenic |
AAATTTGGTCTGTTGTATTA+GGG | 0.308221 | 3_2:+67494344 | Msa0419410:three_prime_UTR |
GATGGTGAAAGTGGTGATTT+TGG | 0.309890 | 3_2:+67491181 | Msa0419410:CDS |
TTGTTGCTGGAGTAGGGTTT+TGG | 0.316056 | 3_2:-67490914 | None:intergenic |
ACTTGTATTTATGTTTCAAT+TGG | 0.328341 | 3_2:+67494421 | Msa0419410:three_prime_UTR |
GAGAAAGCGAAGGATGTAAG+AGG | 0.337574 | 3_2:-67490828 | None:intergenic |
AGACAAAGACATTGGGGCTC+TGG | 0.353840 | 3_2:+67492001 | Msa0419410:CDS |
CGGTGAAATGGGGATTGATT+GGG | 0.359928 | 3_2:-67490886 | None:intergenic |
CTAAGTGCAGGCCGCAAATC+TGG | 0.366420 | 3_2:-67493833 | None:intergenic |
GAGCTCATTGCTGTTCTTGA+AGG | 0.367151 | 3_2:+67491382 | Msa0419410:CDS |
AAAATGGTGGTTAGAAGAAA+AGG | 0.368505 | 3_2:+67491096 | Msa0419410:CDS |
TTCTCTGAGACAAAGACATT+GGG | 0.370922 | 3_2:+67491994 | Msa0419410:CDS |
TTGAGTGTATGGAAGGATTT+CGG | 0.378378 | 3_2:+67490962 | Msa0419410:CDS |
AAAGATCTTAAAGATGTTGA+TGG | 0.382922 | 3_2:+67491697 | Msa0419410:CDS |
GAAGAAAGTGGAAATCTTGA+TGG | 0.384461 | 3_2:+67491019 | Msa0419410:CDS |
TAATCAATGTTTGGATTTCA+AGG | 0.391609 | 3_2:+67494192 | Msa0419410:three_prime_UTR |
AGAGGATGATGATGTGAGTA+AGG | 0.404212 | 3_2:+67491285 | Msa0419410:CDS |
CAAATCCACCAGAGGTGAAA+TGG | 0.404466 | 3_2:+67491771 | Msa0419410:CDS |
GCCACTAACTCGTGAAGTTT+AGG | 0.405829 | 3_2:+67490625 | Msa0419410:five_prime_UTR |
CTTGTATTTATGTTTCAATT+GGG | 0.407559 | 3_2:+67494422 | Msa0419410:three_prime_UTR |
GTGAGACAAGTAGATGATAA+AGG | 0.408119 | 3_2:+67491829 | Msa0419410:CDS |
ACAAAGATCCGTTGAGTGTA+TGG | 0.409756 | 3_2:+67490951 | Msa0419410:CDS |
GGCGACGTTGGCGGCGGCGT+AGG | 0.413312 | 3_2:-67490668 | None:intergenic |
TGAAACACCACCACCTTTCA+CGG | 0.413786 | 3_2:-67492037 | None:intergenic |
CACAAGTCCCCGATCGGAAT+GGG | 0.416497 | 3_2:+67490603 | Msa0419410:five_prime_UTR |
TGGAATTTGAAAGAGGATAC+TGG | 0.418798 | 3_2:+67491244 | Msa0419410:CDS |
TTTGTTTAAAGGAATTGATA+AGG | 0.420765 | 3_2:+67491144 | Msa0419410:CDS |
ATGTGATGTTAATCAATGTT+TGG | 0.421479 | 3_2:+67494183 | Msa0419410:three_prime_UTR |
ACGGTGAAATGGGGATTGAT+TGG | 0.427409 | 3_2:-67490887 | None:intergenic |
TAGCAGGGCTTTGCAAAGTT+GGG | 0.438793 | 3_2:+67493808 | Msa0419410:CDS |
GCAAGTTGGAGCTATACGTT+TGG | 0.439544 | 3_2:+67493781 | Msa0419410:CDS |
TAAACGCTCCATTTCACCTC+TGG | 0.442301 | 3_2:-67491779 | None:intergenic |
ATGCGCTATGAGAGGAATAC+TGG | 0.445921 | 3_2:+67491748 | Msa0419410:CDS |
GACAAAGACATTGGGGCTCT+GGG | 0.446637 | 3_2:+67492002 | Msa0419410:CDS |
TTAGCAGGGCTTTGCAAAGT+TGG | 0.453242 | 3_2:+67493807 | Msa0419410:CDS |
GTGAAGGAGGGGAGAGAGTG+AGG | 0.453262 | 3_2:+67491053 | Msa0419410:CDS |
ACCTAAACTTCACGAGTTAG+TGG | 0.460484 | 3_2:-67490626 | None:intergenic |
AAAGGACGTGCCTATGGAAC+CGG | 0.464161 | 3_2:+67491847 | Msa0419410:CDS |
GTTAGTGGCCCATTCCGATC+GGG | 0.464787 | 3_2:-67490611 | None:intergenic |
GGGATGAATGAAGGTGAAGG+AGG | 0.464929 | 3_2:+67491040 | Msa0419410:CDS |
AGGAGGGGAGAGAGTGAGGA+AGG | 0.465845 | 3_2:+67491057 | Msa0419410:CDS |
CTATACGTTTGGGTATTAGC+AGG | 0.467402 | 3_2:+67493792 | Msa0419410:CDS |
TAGTGAGAAATGAGTGTTGC+CGG | 0.469100 | 3_2:-67490704 | None:intergenic |
TATCTGCTCCAACACCAATA+TGG | 0.469968 | 3_2:-67491207 | None:intergenic |
CAAGTTGGAGCTATACGTTT+GGG | 0.473428 | 3_2:+67493782 | Msa0419410:CDS |
TTGTCTCAGAGAAAGGTCTA+AGG | 0.474986 | 3_2:-67491984 | None:intergenic |
GGATGAATGAAGGTGAAGGA+GGG | 0.475747 | 3_2:+67491041 | Msa0419410:CDS |
ACGCTCCATTTCACCTCTGG+TGG | 0.482192 | 3_2:-67491776 | None:intergenic |
CTCGTAATAACACAAATCTA+AGG | 0.486161 | 3_2:-67494241 | None:intergenic |
ACTGCAGGAACGAAAGCTTT+TGG | 0.489898 | 3_2:+67491616 | Msa0419410:intron |
CTACTCTTGAATCCCTTGTC+AGG | 0.493764 | 3_2:-67494006 | None:intergenic |
GCTGACGGCGACGTTGGCGG+CGG | 0.494831 | 3_2:-67490674 | None:intergenic |
GATGATAAAGGACGTGCCTA+TGG | 0.496476 | 3_2:+67491841 | Msa0419410:CDS |
TTTGGTGACCATATTGGTGT+TGG | 0.496594 | 3_2:+67491199 | Msa0419410:CDS |
GCGTTTAAAGCAAGAGGAAG+CGG | 0.500853 | 3_2:+67491795 | Msa0419410:CDS |
CAGATAATGTTGATGAACCT+TGG | 0.500891 | 3_2:+67491224 | Msa0419410:CDS |
AATGTCTTTGTCTCAGAGAA+AGG | 0.501501 | 3_2:-67491991 | None:intergenic |
CCTCAAGATTTATATAATGA+TGG | 0.501670 | 3_2:-67494483 | None:intergenic |
AAATGGTGGTTAGAAGAAAA+GGG | 0.502327 | 3_2:+67491097 | Msa0419410:CDS |
ACCATAAATTTACCGTTACC+AGG | 0.502617 | 3_2:-67491907 | None:intergenic |
AGAAAGCGAAGGATGTAAGA+GGG | 0.503734 | 3_2:-67490827 | None:intergenic |
GGGAATTAAACGAGAAAGCA+TGG | 0.511823 | 3_2:-67490798 | None:intergenic |
TGAAGTTTAAGAAATTATTG+AGG | 0.521773 | 3_2:-67494139 | None:intergenic |
TGAACCTTGGAATTTGAAAG+AGG | 0.523153 | 3_2:+67491237 | Msa0419410:CDS |
TTTCTCTGAGACAAAGACAT+TGG | 0.523584 | 3_2:+67491993 | Msa0419410:CDS |
GGGATTCAAGAGTAGTAGAA+AGG | 0.524223 | 3_2:+67494014 | Msa0419410:CDS |
GTATCCTCTTTCAAATTCCA+AGG | 0.528823 | 3_2:-67491241 | None:intergenic |
TTCATACCACTTCTAAGTGC+AGG | 0.531151 | 3_2:-67493845 | None:intergenic |
AAATTATTCGATGAAGAAAG+TGG | 0.531395 | 3_2:+67491007 | Msa0419410:CDS |
TTCATGACAATAGGGCAAGT+TGG | 0.534750 | 3_2:+67493767 | Msa0419410:intron |
AAAGCTGACGGCGACGTTGG+CGG | 0.538561 | 3_2:-67490677 | None:intergenic |
AAGGAAACTGAGGTTAAAGA+TGG | 0.540127 | 3_2:+67491163 | Msa0419410:CDS |
GCACAAGTCCCCGATCGGAA+TGG | 0.540434 | 3_2:+67490602 | Msa0419410:five_prime_UTR |
GATCAGTCGGCTTCCTGACA+AGG | 0.540941 | 3_2:+67493993 | Msa0419410:intron |
TTCTCACTATCACAACGAAA+AGG | 0.543881 | 3_2:+67490718 | Msa0419410:five_prime_UTR |
GGTGAAATGGGGATTGATTG+GGG | 0.545984 | 3_2:-67490885 | None:intergenic |
GAGAAAGCTGACGGCGACGT+TGG | 0.546059 | 3_2:-67490680 | None:intergenic |
ACGTTGGCGGCGGCGTAGGA+AGG | 0.552089 | 3_2:-67490664 | None:intergenic |
TAGCACGATGATCGAGCATA+GGG | 0.554600 | 3_2:-67491957 | None:intergenic |
TTCTGAACCTCCTCTTGACT+CGG | 0.562611 | 3_2:-67491340 | None:intergenic |
TATACGTTTGGGTATTAGCA+GGG | 0.565628 | 3_2:+67493793 | Msa0419410:CDS |
GGGTATTGATAATGAAGAAG+AGG | 0.566295 | 3_2:+67491117 | Msa0419410:CDS |
GCACGTGTGTGGGTTCAGCC+TGG | 0.568099 | 3_2:+67491889 | Msa0419410:CDS |
TGGTGAGCTTAATGTTGTCG+AGG | 0.568877 | 3_2:+67491315 | Msa0419410:CDS |
GGATGATGATGTGAGTAAGG+AGG | 0.571155 | 3_2:+67491288 | Msa0419410:CDS |
TAAACTCTCAAGCATTTCGT+CGG | 0.573331 | 3_2:-67491665 | None:intergenic |
GTAGCACGATGATCGAGCAT+AGG | 0.575752 | 3_2:-67491958 | None:intergenic |
GATGAATGAAGGTGAAGGAG+GGG | 0.576275 | 3_2:+67491042 | Msa0419410:CDS |
AATCTTGATGGGATGAATGA+AGG | 0.577942 | 3_2:+67491031 | Msa0419410:CDS |
GTGTGGGTTCAGCCTGGTAA+CGG | 0.579940 | 3_2:+67491895 | Msa0419410:CDS |
AGGAATTGATAAGGAAACTG+AGG | 0.581256 | 3_2:+67491153 | Msa0419410:CDS |
TTGCGGCCTGCACTTAGAAG+TGG | 0.583652 | 3_2:+67493839 | Msa0419410:CDS |
GAGGTTAAAGATGGTGAAAG+TGG | 0.584687 | 3_2:+67491172 | Msa0419410:CDS |
AATGCAGTATAGCACGTGTG+TGG | 0.584778 | 3_2:+67491878 | Msa0419410:CDS |
TTTGGAAACACGGTGAAATG+GGG | 0.585018 | 3_2:-67490896 | None:intergenic |
AAGATCTTAAAGATGTTGAT+GGG | 0.585151 | 3_2:+67491698 | Msa0419410:CDS |
AGTTAGTGGCCCATTCCGAT+CGG | 0.585404 | 3_2:-67490612 | None:intergenic |
AATTGTACCGTGAAAGGTGG+TGG | 0.586653 | 3_2:+67492030 | Msa0419410:CDS |
AAAGTTGGGAACCAGATTTG+CGG | 0.586970 | 3_2:+67493822 | Msa0419410:CDS |
TGATGATGTGAGTAAGGAGG+AGG | 0.588163 | 3_2:+67491291 | Msa0419410:CDS |
AGATCCGTTGAGTGTATGGA+AGG | 0.589095 | 3_2:+67490955 | Msa0419410:CDS |
GGTGAGCTTAATGTTGTCGA+GGG | 0.589292 | 3_2:+67491316 | Msa0419410:CDS |
ATCAGTCGGCTTCCTGACAA+GGG | 0.591884 | 3_2:+67493994 | Msa0419410:intron |
ATGGAAGAGAGAGAAAGCGA+AGG | 0.602824 | 3_2:-67490838 | None:intergenic |
GTCGCCGTCAGCTTTCTCTC+CGG | 0.604644 | 3_2:+67490685 | Msa0419410:five_prime_UTR |
GGAGGTTCAGAAGCTTGAGA+AGG | 0.611036 | 3_2:+67491351 | Msa0419410:CDS |
ATGCAGTATAGCACGTGTGT+GGG | 0.611437 | 3_2:+67491879 | Msa0419410:CDS |
GATGTTAATTGTACCGTGAA+AGG | 0.611552 | 3_2:+67492024 | Msa0419410:CDS |
AAGAAAGTGGAAATCTTGAT+GGG | 0.619055 | 3_2:+67491020 | Msa0419410:CDS |
AAATCCTTCCATACACTCAA+CGG | 0.620817 | 3_2:-67490959 | None:intergenic |
GTGAAATGGGGATTGATTGG+GGG | 0.623151 | 3_2:-67490884 | None:intergenic |
GAAGGATTTCGGAGAAACAG+AGG | 0.628489 | 3_2:+67490973 | Msa0419410:CDS |
TTTGTGCACAAGTCCCCGAT+CGG | 0.632648 | 3_2:+67490597 | Msa0419410:five_prime_UTR |
CCATCATTATATAAATCTTG+AGG | 0.636577 | 3_2:+67494483 | Msa0419410:three_prime_UTR |
CGAGGGTCCGAGTCAAGAGG+AGG | 0.644556 | 3_2:+67491333 | Msa0419410:CDS |
AATGGAGCGTTTAAAGCAAG+AGG | 0.646020 | 3_2:+67491789 | Msa0419410:CDS |
GATGTGAGTAAGGAGGAGGT+TGG | 0.653294 | 3_2:+67491295 | Msa0419410:CDS |
TCTCTGAGACAAAGACATTG+GGG | 0.653728 | 3_2:+67491995 | Msa0419410:CDS |
TTAGTGGCCCATTCCGATCG+GGG | 0.657655 | 3_2:-67490610 | None:intergenic |
TGTCGAGGGTCCGAGTCAAG+AGG | 0.658139 | 3_2:+67491330 | Msa0419410:CDS |
GTTGCCGGAGAGAAAGCTGA+CGG | 0.666218 | 3_2:-67490689 | None:intergenic |
GATGGGATGAATGAAGGTGA+AGG | 0.675149 | 3_2:+67491037 | Msa0419410:CDS |
GTTAATTGTACCGTGAAAGG+TGG | 0.683961 | 3_2:+67492027 | Msa0419410:CDS |
GACGTGCCTATGGAACCGGA+AGG | 0.727860 | 3_2:+67491851 | Msa0419410:CDS |
AATACTGGCAAATCCACCAG+AGG | 0.729786 | 3_2:+67491763 | Msa0419410:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATATTGAATATATTTTTTT+AGG | + | chr3_2:67492138-67492157 | Msa0419410:intron | 10.0% |
!!! | ATCTTTTTAGTTAAATTAAA+AGG | + | chr3_2:67494458-67494477 | Msa0419410:three_prime_UTR | 10.0% |
!! | TAACTTATTAAGCATTTATA+TGG | + | chr3_2:67492788-67492807 | Msa0419410:intron | 15.0% |
!!! | TTCATTTTTAAAATAAAAGC+AGG | - | chr3_2:67493242-67493261 | None:intergenic | 15.0% |
!!! | TTAATTTACTTGACATTTTT+TGG | + | chr3_2:67493511-67493530 | Msa0419410:intron | 15.0% |
!!! | ACATTTTTTGGTTTTATTTA+GGG | + | chr3_2:67493523-67493542 | Msa0419410:intron | 15.0% |
!! | ATAATATTCATTATGTAGTT+AGG | - | chr3_2:67494317-67494336 | None:intergenic | 15.0% |
!! | TTTGTTTAAAGGAATTGATA+AGG | + | chr3_2:67491144-67491163 | Msa0419410:CDS | 20.0% |
!! | AAAACTAGAAAAATCTTCAA+CGG | - | chr3_2:67491493-67491512 | None:intergenic | 20.0% |
!!! | TTCTAGTTTTAATTTGAATG+TGG | + | chr3_2:67491503-67491522 | Msa0419410:intron | 20.0% |
!!! | ATTTTTTCTATTTCACTAAG+AGG | - | chr3_2:67491730-67491749 | None:intergenic | 20.0% |
!! | AAGAAATTTATGCTAATGAT+AGG | - | chr3_2:67492117-67492136 | None:intergenic | 20.0% |
!!! | TTTTGTACTAAATAGTGTAT+TGG | + | chr3_2:67492290-67492309 | Msa0419410:intron | 20.0% |
!! | ATGAAAAATGAAAGAGATAA+AGG | - | chr3_2:67493144-67493163 | None:intergenic | 20.0% |
!!! | TATCTCTTTCATTTTTCATA+TGG | + | chr3_2:67493145-67493164 | Msa0419410:intron | 20.0% |
!! | TTTGAAAAATATGAACTCTA+AGG | + | chr3_2:67493478-67493497 | Msa0419410:intron | 20.0% |
!!! | GACATTTTTTGGTTTTATTT+AGG | + | chr3_2:67493522-67493541 | Msa0419410:intron | 20.0% |
!! | TTTAAATGTCAAAATTAGAG+AGG | - | chr3_2:67493562-67493581 | None:intergenic | 20.0% |
!! | TCTCTTTATTATTTGATTGT+TGG | - | chr3_2:67493634-67493653 | None:intergenic | 20.0% |
!! | TAAAAGACTAACATGAAAAA+AGG | - | chr3_2:67493907-67493926 | None:intergenic | 20.0% |
!! | TGAAGTTTAAGAAATTATTG+AGG | - | chr3_2:67494142-67494161 | None:intergenic | 20.0% |
!!! | GTGTAGTTATTTTTTGTTTT+TGG | + | chr3_2:67494395-67494414 | Msa0419410:three_prime_UTR | 20.0% |
!! | ACTTGTATTTATGTTTCAAT+TGG | + | chr3_2:67494421-67494440 | Msa0419410:three_prime_UTR | 20.0% |
!! | CTTGTATTTATGTTTCAATT+GGG | + | chr3_2:67494422-67494441 | Msa0419410:three_prime_UTR | 20.0% |
! | AAATTATTCGATGAAGAAAG+TGG | + | chr3_2:67491007-67491026 | Msa0419410:CDS | 25.0% |
!!! | AAGTTGATGATGAACAAAAA+TGG | + | chr3_2:67491080-67491099 | Msa0419410:CDS | 25.0% |
! | ATAACAAACTAACAACAGAA+GGG | - | chr3_2:67491420-67491439 | None:intergenic | 25.0% |
! | AATAACAAACTAACAACAGA+AGG | - | chr3_2:67491421-67491440 | None:intergenic | 25.0% |
!!! | TTAGTTTTAGACATTGTTGA+AGG | + | chr3_2:67491443-67491462 | Msa0419410:intron | 25.0% |
! | ATGAAACTGAATTATTGTCA+AGG | + | chr3_2:67491563-67491582 | Msa0419410:intron | 25.0% |
! | AAAGATCTTAAAGATGTTGA+TGG | + | chr3_2:67491697-67491716 | Msa0419410:CDS | 25.0% |
! | AAGATCTTAAAGATGTTGAT+GGG | + | chr3_2:67491698-67491717 | Msa0419410:CDS | 25.0% |
!! | TACTTTGGTAATTTGAGTTT+GGG | + | chr3_2:67492170-67492189 | Msa0419410:intron | 25.0% |
! | TACAAAACATTGTCAAATTG+CGG | - | chr3_2:67492277-67492296 | None:intergenic | 25.0% |
!! | TAAACCAGTGTTGTTAAATA+GGG | - | chr3_2:67492378-67492397 | None:intergenic | 25.0% |
!!! | TATTTAACAACACTGGTTTA+GGG | + | chr3_2:67492378-67492397 | Msa0419410:intron | 25.0% |
!! | CCTATGTTTTTCTTATTCAT+TGG | - | chr3_2:67492699-67492718 | None:intergenic | 25.0% |
! | CCAATGAATAAGAAAAACAT+AGG | + | chr3_2:67492696-67492715 | Msa0419410:intron | 25.0% |
! | AATAAGAAAAACATAGGAGA+GGG | + | chr3_2:67492702-67492721 | Msa0419410:intron | 25.0% |
!!! | TCTAAGACTAGTTTTTTTGT+TGG | - | chr3_2:67492871-67492890 | None:intergenic | 25.0% |
!!! | AGTACAGTTTTTAAGAACTA+AGG | + | chr3_2:67492955-67492974 | Msa0419410:intron | 25.0% |
! | AAAAATGAAAGTTCAGCATA+TGG | - | chr3_2:67493053-67493072 | None:intergenic | 25.0% |
! | AAATACAGGTTTCATTAGTT+CGG | - | chr3_2:67493302-67493321 | None:intergenic | 25.0% |
! | CATGTAAATGGAAGATATAA+GGG | + | chr3_2:67493397-67493416 | Msa0419410:intron | 25.0% |
! | CTTTATTATTTGATTGTTGG+TGG | - | chr3_2:67493631-67493650 | None:intergenic | 25.0% |
! | GTTGATTAAGATAATACGAA+GGG | - | chr3_2:67493738-67493757 | None:intergenic | 25.0% |
!!! | TTGAAAACTTTTTCTTGCTT+TGG | - | chr3_2:67494056-67494075 | None:intergenic | 25.0% |
!! | AAGCAAGAAAAAGTTTTCAA+TGG | + | chr3_2:67494056-67494075 | Msa0419410:CDS | 25.0% |
!! | AGCAAGAAAAAGTTTTCAAT+GGG | + | chr3_2:67494057-67494076 | Msa0419410:CDS | 25.0% |
!!! | GCATTTTTTGTTTGGAATTT+CGG | + | chr3_2:67494112-67494131 | Msa0419410:three_prime_UTR | 25.0% |
! | ATGTGATGTTAATCAATGTT+TGG | + | chr3_2:67494183-67494202 | Msa0419410:three_prime_UTR | 25.0% |
! | TAATCAATGTTTGGATTTCA+AGG | + | chr3_2:67494192-67494211 | Msa0419410:three_prime_UTR | 25.0% |
! | AAAATTTGGTCTGTTGTATT+AGG | + | chr3_2:67494343-67494362 | Msa0419410:three_prime_UTR | 25.0% |
! | AAATTTGGTCTGTTGTATTA+GGG | + | chr3_2:67494344-67494363 | Msa0419410:three_prime_UTR | 25.0% |
! | CCTCAAGATTTATATAATGA+TGG | - | chr3_2:67494486-67494505 | None:intergenic | 25.0% |
! | CCATCATTATATAAATCTTG+AGG | + | chr3_2:67494483-67494502 | Msa0419410:three_prime_UTR | 25.0% |
!!! | GTTATTGTTTTTGTTGTTGC+TGG | - | chr3_2:67490930-67490949 | None:intergenic | 30.0% |
AAGAAAGTGGAAATCTTGAT+GGG | + | chr3_2:67491020-67491039 | Msa0419410:CDS | 30.0% | |
!! | TTGATGATGAACAAAAATGG+TGG | + | chr3_2:67491083-67491102 | Msa0419410:CDS | 30.0% |
AAAATGGTGGTTAGAAGAAA+AGG | + | chr3_2:67491096-67491115 | Msa0419410:CDS | 30.0% | |
AAATGGTGGTTAGAAGAAAA+GGG | + | chr3_2:67491097-67491116 | Msa0419410:CDS | 30.0% | |
!!! | TGATGTTTTTGGTTTCAAAG+AGG | + | chr3_2:67491267-67491286 | Msa0419410:CDS | 30.0% |
TAACAAACTAACAACAGAAG+GGG | - | chr3_2:67491419-67491438 | None:intergenic | 30.0% | |
TTTAGACATTGTTGAAGGTT+TGG | + | chr3_2:67491448-67491467 | Msa0419410:intron | 30.0% | |
! | TTTTCTATTTCACTAAGAGG+TGG | - | chr3_2:67491727-67491746 | None:intergenic | 30.0% |
CAAACTCAAATTACCAAAGT+AGG | - | chr3_2:67492171-67492190 | None:intergenic | 30.0% | |
! | CTACTTTGGTAATTTGAGTT+TGG | + | chr3_2:67492169-67492188 | Msa0419410:intron | 30.0% |
! | ACTTTGGTAATTTGAGTTTG+GGG | + | chr3_2:67492171-67492190 | Msa0419410:intron | 30.0% |
TTGTTAAATAGGGGTTATAG+CGG | - | chr3_2:67492368-67492387 | None:intergenic | 30.0% | |
! | AAACCAGTGTTGTTAAATAG+GGG | - | chr3_2:67492377-67492396 | None:intergenic | 30.0% |
! | CTAAACCAGTGTTGTTAAAT+AGG | - | chr3_2:67492379-67492398 | None:intergenic | 30.0% |
!! | CTATTTAACAACACTGGTTT+AGG | + | chr3_2:67492377-67492396 | Msa0419410:intron | 30.0% |
! | ATTTTGTACTGTATCATGCA+TGG | - | chr3_2:67492474-67492493 | None:intergenic | 30.0% |
ATGCATGATACAGTACAAAA+TGG | + | chr3_2:67492473-67492492 | Msa0419410:intron | 30.0% | |
CAAGTATTTGCTTAAGAGAT+TGG | + | chr3_2:67492612-67492631 | Msa0419410:intron | 30.0% | |
GAATAAGAAAAACATAGGAG+AGG | + | chr3_2:67492701-67492720 | Msa0419410:intron | 30.0% | |
ATAAGAAAAACATAGGAGAG+GGG | + | chr3_2:67492703-67492722 | Msa0419410:intron | 30.0% | |
ACACAGTTCTTCAAAGTAAA+CGG | - | chr3_2:67492983-67493002 | None:intergenic | 30.0% | |
ATTATTCACGACCAATGTAT+GGG | - | chr3_2:67493080-67493099 | None:intergenic | 30.0% | |
AATTATTCACGACCAATGTA+TGG | - | chr3_2:67493081-67493100 | None:intergenic | 30.0% | |
AAAAGTAGCTCACTTATTCT+TGG | - | chr3_2:67493195-67493214 | None:intergenic | 30.0% | |
TAAAACGATTGAAGTAAACG+AGG | + | chr3_2:67493266-67493285 | Msa0419410:intron | 30.0% | |
TATTCTAGCATGACAAATAC+AGG | - | chr3_2:67493316-67493335 | None:intergenic | 30.0% | |
ATTCATGAATGATATCGCAA+AGG | - | chr3_2:67493341-67493360 | None:intergenic | 30.0% | |
!! | AGCTTTCTTTTATTTCGATC+AGG | + | chr3_2:67493365-67493384 | Msa0419410:intron | 30.0% |
GCATGTAAATGGAAGATATA+AGG | + | chr3_2:67493396-67493415 | Msa0419410:intron | 30.0% | |
GGGAGAAAATATTTATGAAC+TGG | + | chr3_2:67493417-67493436 | Msa0419410:intron | 30.0% | |
ATACGAAGGGAAAAATGAAT+TGG | - | chr3_2:67493725-67493744 | None:intergenic | 30.0% | |
! | CGTTGATTAAGATAATACGA+AGG | - | chr3_2:67493739-67493758 | None:intergenic | 30.0% |
AAACCTGTTTCATGACAATA+GGG | + | chr3_2:67493759-67493778 | Msa0419410:intron | 30.0% | |
AGTTTAGTGATTCATCAATG+CGG | - | chr3_2:67493956-67493975 | None:intergenic | 30.0% | |
!!! | GTTAAAAGAGCATCATTTTC+TGG | + | chr3_2:67494086-67494105 | Msa0419410:exon | 30.0% |
CTCGTAATAACACAAATCTA+AGG | - | chr3_2:67494244-67494263 | None:intergenic | 30.0% | |
CTACACAAAAATAAGCAGAA+TGG | - | chr3_2:67494381-67494400 | None:intergenic | 30.0% | |
TTCTCACTATCACAACGAAA+AGG | + | chr3_2:67490718-67490737 | Msa0419410:five_prime_UTR | 35.0% | |
!!! | AGGATGTAAGAGGGTTTTTT+GGG | - | chr3_2:67490821-67490840 | None:intergenic | 35.0% |
!!! | AAGGATGTAAGAGGGTTTTT+TGG | - | chr3_2:67490822-67490841 | None:intergenic | 35.0% |
! | ATTGGGGAAATTAGGGTTTT+TGG | - | chr3_2:67490864-67490883 | None:intergenic | 35.0% |
!! | TTTTGGAAACACGGTGAAAT+GGG | - | chr3_2:67490900-67490919 | None:intergenic | 35.0% |
!!! | TTTTTGTTGTTGCTGGAGTA+GGG | - | chr3_2:67490923-67490942 | None:intergenic | 35.0% |
AAATCCTTCCATACACTCAA+CGG | - | chr3_2:67490962-67490981 | None:intergenic | 35.0% | |
TTGAGTGTATGGAAGGATTT+CGG | + | chr3_2:67490962-67490981 | Msa0419410:CDS | 35.0% | |
GAAGAAAGTGGAAATCTTGA+TGG | + | chr3_2:67491019-67491038 | Msa0419410:CDS | 35.0% | |
AATCTTGATGGGATGAATGA+AGG | + | chr3_2:67491031-67491050 | Msa0419410:CDS | 35.0% | |
!! | GGGTATTGATAATGAAGAAG+AGG | + | chr3_2:67491117-67491136 | Msa0419410:CDS | 35.0% |
!! | GAAGAGGATGCTTTGTTTAA+AGG | + | chr3_2:67491133-67491152 | Msa0419410:CDS | 35.0% |
AGGAATTGATAAGGAAACTG+AGG | + | chr3_2:67491153-67491172 | Msa0419410:CDS | 35.0% | |
AAGGAAACTGAGGTTAAAGA+TGG | + | chr3_2:67491163-67491182 | Msa0419410:CDS | 35.0% | |
! | CAGATAATGTTGATGAACCT+TGG | + | chr3_2:67491224-67491243 | Msa0419410:CDS | 35.0% |
TGAACCTTGGAATTTGAAAG+AGG | + | chr3_2:67491237-67491256 | Msa0419410:CDS | 35.0% | |
GTATCCTCTTTCAAATTCCA+AGG | - | chr3_2:67491244-67491263 | None:intergenic | 35.0% | |
TGGAATTTGAAAGAGGATAC+TGG | + | chr3_2:67491244-67491263 | Msa0419410:CDS | 35.0% | |
ATTTGAATGTGGAAGCTGAA+TGG | + | chr3_2:67491514-67491533 | Msa0419410:intron | 35.0% | |
!! | AATGGAATTGAAAGGTGTTG+CGG | + | chr3_2:67491532-67491551 | Msa0419410:intron | 35.0% |
! | TTTTACTGTATTGTGACTGC+AGG | + | chr3_2:67491601-67491620 | Msa0419410:intron | 35.0% |
TAAACTCTCAAGCATTTCGT+CGG | - | chr3_2:67491668-67491687 | None:intergenic | 35.0% | |
TAGAAAAAATGCGCTATGAG+AGG | + | chr3_2:67491740-67491759 | Msa0419410:CDS | 35.0% | |
GTGAGACAAGTAGATGATAA+AGG | + | chr3_2:67491829-67491848 | Msa0419410:CDS | 35.0% | |
! | TATACTGCATTTTCTCCTTC+CGG | - | chr3_2:67491869-67491888 | None:intergenic | 35.0% |
ACCATAAATTTACCGTTACC+AGG | - | chr3_2:67491910-67491929 | None:intergenic | 35.0% | |
AATGTCTTTGTCTCAGAGAA+AGG | - | chr3_2:67491994-67492013 | None:intergenic | 35.0% | |
!! | TTTCTCTGAGACAAAGACAT+TGG | + | chr3_2:67491993-67492012 | Msa0419410:CDS | 35.0% |
!! | TTCTCTGAGACAAAGACATT+GGG | + | chr3_2:67491994-67492013 | Msa0419410:CDS | 35.0% |
GATGTTAATTGTACCGTGAA+AGG | + | chr3_2:67492024-67492043 | Msa0419410:CDS | 35.0% | |
TATGCTAATGATAGGACTTC+AGG | - | chr3_2:67492109-67492128 | None:intergenic | 35.0% | |
! | TTTAGGATGAATGCCTACTT+TGG | + | chr3_2:67492155-67492174 | Msa0419410:intron | 35.0% |
TGTTAAATAGGGGTTATAGC+GGG | - | chr3_2:67492367-67492386 | None:intergenic | 35.0% | |
TAACCCCTATTTAACAACAC+TGG | + | chr3_2:67492371-67492390 | Msa0419410:intron | 35.0% | |
CAGTGAATCTACACATACAT+GGG | - | chr3_2:67492560-67492579 | None:intergenic | 35.0% | |
ATACTTGTCTGATGTATGCT+TGG | - | chr3_2:67492599-67492618 | None:intergenic | 35.0% | |
TAAGAAAAACATAGGAGAGG+GGG | + | chr3_2:67492704-67492723 | Msa0419410:intron | 35.0% | |
CACAGTTCTTCAAAGTAAAC+GGG | - | chr3_2:67492982-67493001 | None:intergenic | 35.0% | |
AATGAAAGTTCAGCATATGG+TGG | - | chr3_2:67493050-67493069 | None:intergenic | 35.0% | |
! | CATTTTTCTACCCCATACAT+TGG | + | chr3_2:67493066-67493085 | Msa0419410:intron | 35.0% |
TTATTCACGACCAATGTATG+GGG | - | chr3_2:67493079-67493098 | None:intergenic | 35.0% | |
ACATTGGTCGTGAATAATTG+TGG | + | chr3_2:67493082-67493101 | Msa0419410:intron | 35.0% | |
AGGAAGACTATGCATGTAAA+TGG | + | chr3_2:67493385-67493404 | Msa0419410:intron | 35.0% | |
GTTGAATATAAGCGCGTATT+TGG | - | chr3_2:67493606-67493625 | None:intergenic | 35.0% | |
GAAACCTGTTTCATGACAAT+AGG | + | chr3_2:67493758-67493777 | Msa0419410:intron | 35.0% | |
TATACGTTTGGGTATTAGCA+GGG | + | chr3_2:67493793-67493812 | Msa0419410:CDS | 35.0% | |
!!! | TCATGTTAGTCTTTTACTCG+TGG | + | chr3_2:67493911-67493930 | Msa0419410:intron | 35.0% |
TGTCCTCAAAATTGATCAGT+CGG | + | chr3_2:67493980-67493999 | Msa0419410:intron | 35.0% | |
GTAGTAGAAAGGAAAAAACC+TGG | + | chr3_2:67494025-67494044 | Msa0419410:CDS | 35.0% | |
AGAAAGGAAAAAACCTGGAA+AGG | + | chr3_2:67494030-67494049 | Msa0419410:CDS | 35.0% | |
!!! | AAAGAGCATCATTTTCTGGA+TGG | + | chr3_2:67494090-67494109 | Msa0419410:exon | 35.0% |
!!! | TCTGGATGGCATTTTTTGTT+TGG | + | chr3_2:67494104-67494123 | Msa0419410:three_prime_UTR | 35.0% |
ACCTAAACTTCACGAGTTAG+TGG | - | chr3_2:67490629-67490648 | None:intergenic | 40.0% | |
! | TAGTGAGAAATGAGTGTTGC+CGG | - | chr3_2:67490707-67490726 | None:intergenic | 40.0% |
GGGAATTAAACGAGAAAGCA+TGG | - | chr3_2:67490801-67490820 | None:intergenic | 40.0% | |
AGAAAGCGAAGGATGTAAGA+GGG | - | chr3_2:67490830-67490849 | None:intergenic | 40.0% | |
!! | GGGAAATTAGGGTTTTTGGA+TGG | - | chr3_2:67490860-67490879 | None:intergenic | 40.0% |
TTTGGAAACACGGTGAAATG+GGG | - | chr3_2:67490899-67490918 | None:intergenic | 40.0% | |
!!! | GTTTTGGAAACACGGTGAAA+TGG | - | chr3_2:67490901-67490920 | None:intergenic | 40.0% |
!!! | GTTTTTGTTGTTGCTGGAGT+AGG | - | chr3_2:67490924-67490943 | None:intergenic | 40.0% |
ACAAAGATCCGTTGAGTGTA+TGG | + | chr3_2:67490951-67490970 | Msa0419410:CDS | 40.0% | |
GAGGTTAAAGATGGTGAAAG+TGG | + | chr3_2:67491172-67491191 | Msa0419410:CDS | 40.0% | |
! | GATGGTGAAAGTGGTGATTT+TGG | + | chr3_2:67491181-67491200 | Msa0419410:CDS | 40.0% |
!! | GGTGATTTTGGTGACCATAT+TGG | + | chr3_2:67491193-67491212 | Msa0419410:CDS | 40.0% |
! | TTTGGTGACCATATTGGTGT+TGG | + | chr3_2:67491199-67491218 | Msa0419410:CDS | 40.0% |
TATCTGCTCCAACACCAATA+TGG | - | chr3_2:67491210-67491229 | None:intergenic | 40.0% | |
!! | GAGGATACTGGTGATGTTTT+TGG | + | chr3_2:67491256-67491275 | Msa0419410:CDS | 40.0% |
! | AGAGGATGATGATGTGAGTA+AGG | + | chr3_2:67491285-67491304 | Msa0419410:CDS | 40.0% |
! | CATTGCTGTTCTTGAAGGTT+TGG | + | chr3_2:67491387-67491406 | Msa0419410:intron | 40.0% |
GGAAGCTGAATGGAATTGAA+AGG | + | chr3_2:67491524-67491543 | Msa0419410:intron | 40.0% | |
! | AATGGAGCGTTTAAAGCAAG+AGG | + | chr3_2:67491789-67491808 | Msa0419410:CDS | 40.0% |
!! | GCCTGGTAACGGTAAATTTA+TGG | + | chr3_2:67491906-67491925 | Msa0419410:CDS | 40.0% |
TTGTCTCAGAGAAAGGTCTA+AGG | - | chr3_2:67491987-67492006 | None:intergenic | 40.0% | |
!! | TCTCTGAGACAAAGACATTG+GGG | + | chr3_2:67491995-67492014 | Msa0419410:CDS | 40.0% |
GTTAATTGTACCGTGAAAGG+TGG | + | chr3_2:67492027-67492046 | Msa0419410:CDS | 40.0% | |
GTTAAATAGGGGTTATAGCG+GGG | - | chr3_2:67492366-67492385 | None:intergenic | 40.0% | |
!! | AACAACACTGGTTTAGGGTA+TGG | + | chr3_2:67492383-67492402 | Msa0419410:intron | 40.0% |
CATGCATGTTTGACACTCAA+AGG | + | chr3_2:67492496-67492515 | Msa0419410:intron | 40.0% | |
TGAATCTACACATACATGGG+TGG | - | chr3_2:67492557-67492576 | None:intergenic | 40.0% | |
CCAGTGAATCTACACATACA+TGG | - | chr3_2:67492561-67492580 | None:intergenic | 40.0% | |
CCATGTATGTGTAGATTCAC+TGG | + | chr3_2:67492558-67492577 | Msa0419410:intron | 40.0% | |
GTATGTGTAGATTCACTGGT+TGG | + | chr3_2:67492562-67492581 | Msa0419410:intron | 40.0% | |
GGGTTAGAGTTAGAGACTAT+AGG | + | chr3_2:67492731-67492750 | Msa0419410:intron | 40.0% | |
TAGAGTTAGAGACTATAGGC+AGG | + | chr3_2:67492735-67492754 | Msa0419410:intron | 40.0% | |
AGAGTTAGAGACTATAGGCA+GGG | + | chr3_2:67492736-67492755 | Msa0419410:intron | 40.0% | |
AATGATCCAGATGCATCTCT+TGG | + | chr3_2:67492895-67492914 | Msa0419410:intron | 40.0% | |
AAAAGACCAAGAGATGCATC+TGG | - | chr3_2:67492904-67492923 | None:intergenic | 40.0% | |
TTGGTCGTGAATAATTGTGG+TGG | + | chr3_2:67493085-67493104 | Msa0419410:intron | 40.0% | |
CGTGAATAATTGTGGTGGTT+TGG | + | chr3_2:67493090-67493109 | Msa0419410:intron | 40.0% | |
!!! | GTGAGCTACTTTTCTTCATG+TGG | + | chr3_2:67493202-67493221 | Msa0419410:intron | 40.0% |
TTCATGTGGCATGATCAGTT+TGG | + | chr3_2:67493216-67493235 | Msa0419410:intron | 40.0% | |
AGAGCGTGCATAACAGAAAT+TGG | + | chr3_2:67493651-67493670 | Msa0419410:intron | 40.0% | |
TTGCCCTATTGTCATGAAAC+AGG | - | chr3_2:67493765-67493784 | None:intergenic | 40.0% | |
TTCATGACAATAGGGCAAGT+TGG | + | chr3_2:67493767-67493786 | Msa0419410:intron | 40.0% | |
! | CAAGTTGGAGCTATACGTTT+GGG | + | chr3_2:67493782-67493801 | Msa0419410:CDS | 40.0% |
CTATACGTTTGGGTATTAGC+AGG | + | chr3_2:67493792-67493811 | Msa0419410:CDS | 40.0% | |
AAAGTTGGGAACCAGATTTG+CGG | + | chr3_2:67493822-67493841 | Msa0419410:CDS | 40.0% | |
TTCATACCACTTCTAAGTGC+AGG | - | chr3_2:67493848-67493867 | None:intergenic | 40.0% | |
! | AAGCCGACTGATCAATTTTG+AGG | - | chr3_2:67493986-67494005 | None:intergenic | 40.0% |
GGGATTCAAGAGTAGTAGAA+AGG | + | chr3_2:67494014-67494033 | Msa0419410:CDS | 40.0% | |
! | TACGAGTCATTCACGCTTTT+TGG | + | chr3_2:67494258-67494277 | Msa0419410:three_prime_UTR | 40.0% |
GCCACTAACTCGTGAAGTTT+AGG | + | chr3_2:67490625-67490644 | Msa0419410:five_prime_UTR | 45.0% | |
GAGAAAGCGAAGGATGTAAG+AGG | - | chr3_2:67490831-67490850 | None:intergenic | 45.0% | |
ATGGAAGAGAGAGAAAGCGA+AGG | - | chr3_2:67490841-67490860 | None:intergenic | 45.0% | |
TTGGGGGATTGGGGAAATTA+GGG | - | chr3_2:67490871-67490890 | None:intergenic | 45.0% | |
ATTGGGGGATTGGGGAAATT+AGG | - | chr3_2:67490872-67490891 | None:intergenic | 45.0% | |
GTGAAATGGGGATTGATTGG+GGG | - | chr3_2:67490887-67490906 | None:intergenic | 45.0% | |
GGTGAAATGGGGATTGATTG+GGG | - | chr3_2:67490888-67490907 | None:intergenic | 45.0% | |
CGGTGAAATGGGGATTGATT+GGG | - | chr3_2:67490889-67490908 | None:intergenic | 45.0% | |
ACGGTGAAATGGGGATTGAT+TGG | - | chr3_2:67490890-67490909 | None:intergenic | 45.0% | |
!!! | GGAGTAGGGTTTTGGAAACA+CGG | - | chr3_2:67490909-67490928 | None:intergenic | 45.0% |
! | TTGTTGCTGGAGTAGGGTTT+TGG | - | chr3_2:67490917-67490936 | None:intergenic | 45.0% |
AGATCCGTTGAGTGTATGGA+AGG | + | chr3_2:67490955-67490974 | Msa0419410:CDS | 45.0% | |
GAAGGATTTCGGAGAAACAG+AGG | + | chr3_2:67490973-67490992 | Msa0419410:CDS | 45.0% | |
GATGGGATGAATGAAGGTGA+AGG | + | chr3_2:67491037-67491056 | Msa0419410:CDS | 45.0% | |
GGATGAATGAAGGTGAAGGA+GGG | + | chr3_2:67491041-67491060 | Msa0419410:CDS | 45.0% | |
GATGAATGAAGGTGAAGGAG+GGG | + | chr3_2:67491042-67491061 | Msa0419410:CDS | 45.0% | |
! | GGATGATGATGTGAGTAAGG+AGG | + | chr3_2:67491288-67491307 | Msa0419410:CDS | 45.0% |
! | TGATGATGTGAGTAAGGAGG+AGG | + | chr3_2:67491291-67491310 | Msa0419410:CDS | 45.0% |
TGGTGAGCTTAATGTTGTCG+AGG | + | chr3_2:67491315-67491334 | Msa0419410:CDS | 45.0% | |
GGTGAGCTTAATGTTGTCGA+GGG | + | chr3_2:67491316-67491335 | Msa0419410:CDS | 45.0% | |
TTCTGAACCTCCTCTTGACT+CGG | - | chr3_2:67491343-67491362 | None:intergenic | 45.0% | |
! | GAGCTCATTGCTGTTCTTGA+AGG | + | chr3_2:67491382-67491401 | Msa0419410:CDS | 45.0% |
! | ACTGCAGGAACGAAAGCTTT+TGG | + | chr3_2:67491616-67491635 | Msa0419410:intron | 45.0% |
ATGCGCTATGAGAGGAATAC+TGG | + | chr3_2:67491748-67491767 | Msa0419410:CDS | 45.0% | |
AATACTGGCAAATCCACCAG+AGG | + | chr3_2:67491763-67491782 | Msa0419410:CDS | 45.0% | |
CAAATCCACCAGAGGTGAAA+TGG | + | chr3_2:67491771-67491790 | Msa0419410:CDS | 45.0% | |
TAAACGCTCCATTTCACCTC+TGG | - | chr3_2:67491782-67491801 | None:intergenic | 45.0% | |
! | GCGTTTAAAGCAAGAGGAAG+CGG | + | chr3_2:67491795-67491814 | Msa0419410:CDS | 45.0% |
GATGATAAAGGACGTGCCTA+TGG | + | chr3_2:67491841-67491860 | Msa0419410:CDS | 45.0% | |
! | TTTTCTCCTTCCGGTTCCAT+AGG | - | chr3_2:67491860-67491879 | None:intergenic | 45.0% |
AATGCAGTATAGCACGTGTG+TGG | + | chr3_2:67491878-67491897 | Msa0419410:CDS | 45.0% | |
ATGCAGTATAGCACGTGTGT+GGG | + | chr3_2:67491879-67491898 | Msa0419410:CDS | 45.0% | |
TAGCACGATGATCGAGCATA+GGG | - | chr3_2:67491960-67491979 | None:intergenic | 45.0% | |
AATTGTACCGTGAAAGGTGG+TGG | + | chr3_2:67492030-67492049 | Msa0419410:CDS | 45.0% | |
TGAAACACCACCACCTTTCA+CGG | - | chr3_2:67492040-67492059 | None:intergenic | 45.0% | |
GCTATAGCACTGTTGAGTAG+CGG | - | chr3_2:67492244-67492263 | None:intergenic | 45.0% | |
GCTACTCAACAGTGCTATAG+CGG | + | chr3_2:67492243-67492262 | Msa0419410:intron | 45.0% | |
CATAGTGCATGCTACTCTTC+AGG | + | chr3_2:67492442-67492461 | Msa0419410:intron | 45.0% | |
AGAGACTATAGGCAGGGTAA+CGG | + | chr3_2:67492742-67492761 | Msa0419410:intron | 45.0% | |
TGCTCATTGTGATGCTTGCA+AGG | + | chr3_2:67493169-67493188 | Msa0419410:intron | 45.0% | |
! | GCAAGTTGGAGCTATACGTT+TGG | + | chr3_2:67493781-67493800 | Msa0419410:CDS | 45.0% |
TTAGCAGGGCTTTGCAAAGT+TGG | + | chr3_2:67493807-67493826 | Msa0419410:CDS | 45.0% | |
TAGCAGGGCTTTGCAAAGTT+GGG | + | chr3_2:67493808-67493827 | Msa0419410:CDS | 45.0% | |
CTACTCTTGAATCCCTTGTC+AGG | - | chr3_2:67494009-67494028 | None:intergenic | 45.0% | |
! | TTTCTTGCTTTGGCCTTTCC+AGG | - | chr3_2:67494046-67494065 | None:intergenic | 45.0% |
!! | AATATTATATAATGAAAATT+TGG | + | chr3_2:67494329-67494348 | Msa0419410:three_prime_UTR | 5.0% |
TTTGTGCACAAGTCCCCGAT+CGG | + | chr3_2:67490597-67490616 | Msa0419410:five_prime_UTR | 50.0% | |
AGTTAGTGGCCCATTCCGAT+CGG | - | chr3_2:67490615-67490634 | None:intergenic | 50.0% | |
TGGGGATTGATTGGGGGATT+GGG | - | chr3_2:67490881-67490900 | None:intergenic | 50.0% | |
ATGGGGATTGATTGGGGGAT+TGG | - | chr3_2:67490882-67490901 | None:intergenic | 50.0% | |
GGGATGAATGAAGGTGAAGG+AGG | + | chr3_2:67491040-67491059 | Msa0419410:CDS | 50.0% | |
GATGTGAGTAAGGAGGAGGT+TGG | + | chr3_2:67491295-67491314 | Msa0419410:CDS | 50.0% | |
GGAGGTTCAGAAGCTTGAGA+AGG | + | chr3_2:67491351-67491370 | Msa0419410:CDS | 50.0% | |
! | GGTGACTTGATTGCTGCTTC+TGG | + | chr3_2:67491637-67491656 | Msa0419410:CDS | 50.0% |
AAAGGACGTGCCTATGGAAC+CGG | + | chr3_2:67491847-67491866 | Msa0419410:CDS | 50.0% | |
GTAGCACGATGATCGAGCAT+AGG | - | chr3_2:67491961-67491980 | None:intergenic | 50.0% | |
AGACAAAGACATTGGGGCTC+TGG | + | chr3_2:67492001-67492020 | Msa0419410:CDS | 50.0% | |
GACAAAGACATTGGGGCTCT+GGG | + | chr3_2:67492002-67492021 | Msa0419410:CDS | 50.0% | |
! | GTGAAAGGTGGTGGTGTTTC+AGG | + | chr3_2:67492039-67492058 | Msa0419410:CDS | 50.0% |
! | AGGTGGTGGTGTTTCAGGTA+TGG | + | chr3_2:67492044-67492063 | Msa0419410:intron | 50.0% |
ATGGCGGCACTATAACGTAG+CGG | - | chr3_2:67492341-67492360 | None:intergenic | 50.0% | |
! | TAGGGGTTATAGCGGGGTTA+TGG | - | chr3_2:67492360-67492379 | None:intergenic | 50.0% |
ACACATACATGGGTGGATCG+TGG | - | chr3_2:67492550-67492569 | None:intergenic | 50.0% | |
AAACATAGGAGAGGGGGAGT+TGG | + | chr3_2:67492710-67492729 | Msa0419410:intron | 50.0% | |
AACATAGGAGAGGGGGAGTT+GGG | + | chr3_2:67492711-67492730 | Msa0419410:intron | 50.0% | |
GAGACTATAGGCAGGGTAAC+GGG | + | chr3_2:67492743-67492762 | Msa0419410:intron | 50.0% | |
AGACTATAGGCAGGGTAACG+GGG | + | chr3_2:67492744-67492763 | Msa0419410:intron | 50.0% | |
! | ATCAGTCGGCTTCCTGACAA+GGG | + | chr3_2:67493994-67494013 | Msa0419410:intron | 50.0% |
CACAAGTCCCCGATCGGAAT+GGG | + | chr3_2:67490603-67490622 | Msa0419410:five_prime_UTR | 55.0% | |
TTAGTGGCCCATTCCGATCG+GGG | - | chr3_2:67490613-67490632 | None:intergenic | 55.0% | |
GTTAGTGGCCCATTCCGATC+GGG | - | chr3_2:67490614-67490633 | None:intergenic | 55.0% | |
GTTGCCGGAGAGAAAGCTGA+CGG | - | chr3_2:67490692-67490711 | None:intergenic | 55.0% | |
GGGGATTGATTGGGGGATTG+GGG | - | chr3_2:67490880-67490899 | None:intergenic | 55.0% | |
ACGCTCCATTTCACCTCTGG+TGG | - | chr3_2:67491779-67491798 | None:intergenic | 55.0% | |
GTGTGGGTTCAGCCTGGTAA+CGG | + | chr3_2:67491895-67491914 | Msa0419410:CDS | 55.0% | |
TGGGGCAGTGTTGTCAATCG+TGG | + | chr3_2:67492189-67492208 | Msa0419410:intron | 55.0% | |
! | GGGTTATAGCGGGGTTATGG+CGG | - | chr3_2:67492357-67492376 | None:intergenic | 55.0% |
CTAAGTGCAGGCCGCAAATC+TGG | - | chr3_2:67493836-67493855 | None:intergenic | 55.0% | |
TTGCGGCCTGCACTTAGAAG+TGG | + | chr3_2:67493839-67493858 | Msa0419410:CDS | 55.0% | |
! | GATCAGTCGGCTTCCTGACA+AGG | + | chr3_2:67493993-67494012 | Msa0419410:intron | 55.0% |
GCACAAGTCCCCGATCGGAA+TGG | + | chr3_2:67490602-67490621 | Msa0419410:five_prime_UTR | 60.0% | |
AAAGCTGACGGCGACGTTGG+CGG | - | chr3_2:67490680-67490699 | None:intergenic | 60.0% | |
GAGAAAGCTGACGGCGACGT+TGG | - | chr3_2:67490683-67490702 | None:intergenic | 60.0% | |
GTCGCCGTCAGCTTTCTCTC+CGG | + | chr3_2:67490685-67490704 | Msa0419410:five_prime_UTR | 60.0% | |
GTGAAGGAGGGGAGAGAGTG+AGG | + | chr3_2:67491053-67491072 | Msa0419410:CDS | 60.0% | |
AGGAGGGGAGAGAGTGAGGA+AGG | + | chr3_2:67491057-67491076 | Msa0419410:CDS | 60.0% | |
TGTCGAGGGTCCGAGTCAAG+AGG | + | chr3_2:67491330-67491349 | Msa0419410:CDS | 60.0% | |
GACGTGCCTATGGAACCGGA+AGG | + | chr3_2:67491851-67491870 | Msa0419410:CDS | 60.0% | |
!! | CAGGGTAACGGGGCAGAGAT+GGG | + | chr3_2:67492754-67492773 | Msa0419410:intron | 60.0% |
!! | ACGGGGCAGAGATGGGTTAC+TGG | + | chr3_2:67492761-67492780 | Msa0419410:intron | 60.0% |
CGAGGGTCCGAGTCAAGAGG+AGG | + | chr3_2:67491333-67491352 | Msa0419410:CDS | 65.0% | |
GCACGTGTGTGGGTTCAGCC+TGG | + | chr3_2:67491889-67491908 | Msa0419410:CDS | 65.0% | |
!! | GCAGGGTAACGGGGCAGAGA+TGG | + | chr3_2:67492753-67492772 | Msa0419410:intron | 65.0% |
ACGTTGGCGGCGGCGTAGGA+AGG | - | chr3_2:67490667-67490686 | None:intergenic | 70.0% | |
GCTGACGGCGACGTTGGCGG+CGG | - | chr3_2:67490677-67490696 | None:intergenic | 75.0% | |
! | GGCGACGTTGGCGGCGGCGT+AGG | - | chr3_2:67490671-67490690 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 67490558 | 67494506 | 67490558 | ID=Msa0419410;Name=Msa0419410 |
chr3_2 | mRNA | 67490558 | 67494506 | 67490558 | ID=Msa0419410-mRNA-1;Parent=Msa0419410;Name=Msa0419410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=242|1|1|1|1|1|4|416|404 |
chr3_2 | exon | 67490558 | 67491403 | 67490558 | ID=Msa0419410-mRNA-1:exon:15699;Parent=Msa0419410-mRNA-1 |
chr3_2 | exon | 67491623 | 67492060 | 67491623 | ID=Msa0419410-mRNA-1:exon:15700;Parent=Msa0419410-mRNA-1 |
chr3_2 | exon | 67493780 | 67493860 | 67493780 | ID=Msa0419410-mRNA-1:exon:15701;Parent=Msa0419410-mRNA-1 |
chr3_2 | exon | 67493999 | 67494506 | 67493999 | ID=Msa0419410-mRNA-1:exon:15702;Parent=Msa0419410-mRNA-1 |
chr3_2 | five_prime_UTR | 67490558 | 67490799 | 67490558 | ID=Msa0419410-mRNA-1:five_prime_utr;Parent=Msa0419410-mRNA-1 |
chr3_2 | CDS | 67490800 | 67491403 | 67490800 | ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1 |
chr3_2 | CDS | 67491623 | 67492060 | 67491623 | ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1 |
chr3_2 | CDS | 67493780 | 67493860 | 67493780 | ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1 |
chr3_2 | CDS | 67493999 | 67494090 | 67493999 | ID=Msa0419410-mRNA-1:cds;Parent=Msa0419410-mRNA-1 |
chr3_2 | three_prime_UTR | 67494091 | 67494506 | 67494091 | ID=Msa0419410-mRNA-1:three_prime_utr;Parent=Msa0419410-mRNA-1 |
Gene Sequence |
Protein sequence |