Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445080 | sp|O49343|PP177_ARATH | 44.595 | 444 | 227 | 5 | 192 | 630 | 22 | 451 | 5.29e-132 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445080 | A0A396HTT5 | 91.406 | 640 | 26 | 1 | 1 | 640 | 1 | 611 | 0.0 | 1204 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001780 | Msa1445080 | 0.802321 | 5.930872e-49 | -8.615850e-47 |
| Msa0006390 | Msa1445080 | 0.801175 | 1.019422e-48 | -8.615850e-47 |
| Msa0014710 | Msa1445080 | 0.803112 | 4.071897e-49 | -8.615850e-47 |
| Msa0015120 | Msa1445080 | 0.806976 | 6.332470e-50 | -8.615850e-47 |
| Msa0017510 | Msa1445080 | 0.825198 | 5.341124e-54 | -8.615850e-47 |
| Msa0037700 | Msa1445080 | 0.805161 | 1.525492e-49 | -8.615850e-47 |
| Msa0040450 | Msa1445080 | 0.816692 | 4.851840e-52 | -8.615850e-47 |
| Msa0064290 | Msa1445080 | 0.810519 | 1.107216e-50 | -8.615850e-47 |
| Msa0078060 | Msa1445080 | 0.810302 | 1.233094e-50 | -8.615850e-47 |
| Msa0110970 | Msa1445080 | 0.810036 | 1.407070e-50 | -8.615850e-47 |
| Msa0116770 | Msa1445080 | 0.824454 | 8.001717e-54 | -8.615850e-47 |
| Msa1348360 | Msa1445080 | 0.801634 | 8.206998e-49 | -8.615850e-47 |
| Msa1348490 | Msa1445080 | 0.812947 | 3.280922e-51 | -8.615850e-47 |
| Msa1351730 | Msa1445080 | 0.828822 | 7.261251e-55 | -8.615850e-47 |
| Msa1366600 | Msa1445080 | 0.820874 | 5.445783e-53 | -8.615850e-47 |
| Msa1374040 | Msa1445080 | 0.802021 | 6.835821e-49 | -8.615850e-47 |
| Msa1385000 | Msa1445080 | 0.805970 | 1.032357e-49 | -8.615850e-47 |
| Msa1389400 | Msa1445080 | 0.801706 | 7.933383e-49 | -8.615850e-47 |
| Msa1392260 | Msa1445080 | 0.818315 | 2.089780e-52 | -8.615850e-47 |
| Msa1402400 | Msa1445080 | 0.805034 | 1.622173e-49 | -8.615850e-47 |
| Msa1403480 | Msa1445080 | 0.801316 | 9.538607e-49 | -8.615850e-47 |
| Msa1409870 | Msa1445080 | 0.820467 | 6.753735e-53 | -8.615850e-47 |
| Msa1414690 | Msa1445080 | 0.800157 | 1.644133e-48 | -8.615850e-47 |
| Msa1416150 | Msa1445080 | 0.815098 | 1.099935e-51 | -8.615850e-47 |
| Msa1427060 | Msa1445080 | 0.811408 | 7.106418e-51 | -8.615850e-47 |
| Msa1429900 | Msa1445080 | 0.820614 | 6.250363e-53 | -8.615850e-47 |
| Msa1445080 | Msa1462930 | 0.806504 | 7.965763e-50 | -8.615850e-47 |
| Msa1445080 | Msa1463670 | 0.805783 | 1.129989e-49 | -8.615850e-47 |
| Msa0620240 | Msa1445080 | 0.802123 | 6.513175e-49 | -8.615850e-47 |
| Msa0625720 | Msa1445080 | 0.808273 | 3.358148e-50 | -8.615850e-47 |
| Msa0638070 | Msa1445080 | 0.804852 | 1.770452e-49 | -8.615850e-47 |
| Msa0643220 | Msa1445080 | 0.814263 | 1.684244e-51 | -8.615850e-47 |
| Msa0648880 | Msa1445080 | 0.813925 | 2.000122e-51 | -8.615850e-47 |
| Msa0651270 | Msa1445080 | 0.823827 | 1.123375e-53 | -8.615850e-47 |
| Msa0657970 | Msa1445080 | 0.832669 | 8.283625e-56 | -8.615850e-47 |
| Msa0663250 | Msa1445080 | 0.805436 | 1.336480e-49 | -8.615850e-47 |
| Msa0669440 | Msa1445080 | 0.806973 | 6.341915e-50 | -8.615850e-47 |
| Msa0677080 | Msa1445080 | 0.800547 | 1.369106e-48 | -8.615850e-47 |
| Msa0682550 | Msa1445080 | 0.811770 | 5.927735e-51 | -8.615850e-47 |
| Msa0685750 | Msa1445080 | 0.804046 | 2.606881e-49 | -8.615850e-47 |
| Msa0691380 | Msa1445080 | 0.815871 | 7.405120e-52 | -8.615850e-47 |
| Msa0692230 | Msa1445080 | 0.818778 | 1.641016e-52 | -8.615850e-47 |
| Msa0693380 | Msa1445080 | 0.825778 | 3.894654e-54 | -8.615850e-47 |
| Msa0704600 | Msa1445080 | 0.814307 | 1.646453e-51 | -8.615850e-47 |
| Msa0711790 | Msa1445080 | 0.815234 | 1.026373e-51 | -8.615850e-47 |
| Msa0727710 | Msa1445080 | 0.802069 | 6.683704e-49 | -8.615850e-47 |
| Msa0737560 | Msa1445080 | 0.805993 | 1.020648e-49 | -8.615850e-47 |
| Msa0737570 | Msa1445080 | 0.819201 | 1.315408e-52 | -8.615850e-47 |
| Msa0745790 | Msa1445080 | 0.821358 | 4.212927e-53 | -8.615850e-47 |
| Msa0753790 | Msa1445080 | 0.801847 | 7.424022e-49 | -8.615850e-47 |
| Msa0756630 | Msa1445080 | -0.811834 | 5.742350e-51 | -8.615850e-47 |
| Msa0777300 | Msa1445080 | 0.851063 | 1.132339e-60 | -8.615850e-47 |
| Msa0784380 | Msa1445080 | 0.807648 | 4.561558e-50 | -8.615850e-47 |
| Msa0790510 | Msa1445080 | 0.805793 | 1.124329e-49 | -8.615850e-47 |
| Msa0800700 | Msa1445080 | 0.800926 | 1.145714e-48 | -8.615850e-47 |
| Msa0804230 | Msa1445080 | 0.816745 | 4.720931e-52 | -8.615850e-47 |
| Msa0816700 | Msa1445080 | 0.807738 | 4.364216e-50 | -8.615850e-47 |
| Msa0816710 | Msa1445080 | 0.808025 | 3.793161e-50 | -8.615850e-47 |
| Msa0824660 | Msa1445080 | 0.825720 | 4.018801e-54 | -8.615850e-47 |
| Msa0827040 | Msa1445080 | 0.810411 | 1.168347e-50 | -8.615850e-47 |
| Msa0829620 | Msa1445080 | 0.834045 | 3.759758e-56 | -8.615850e-47 |
| Msa0830530 | Msa1445080 | 0.822409 | 2.405512e-53 | -8.615850e-47 |
| Msa0122590 | Msa1445080 | 0.811976 | 5.348017e-51 | -8.615850e-47 |
| Msa0124340 | Msa1445080 | 0.805461 | 1.320247e-49 | -8.615850e-47 |
| Msa0146260 | Msa1445080 | 0.802748 | 4.842743e-49 | -8.615850e-47 |
| Msa0152400 | Msa1445080 | 0.804291 | 2.318415e-49 | -8.615850e-47 |
| Msa0157290 | Msa1445080 | 0.825237 | 5.230769e-54 | -8.615850e-47 |
| Msa0165210 | Msa1445080 | 0.807322 | 5.348467e-50 | -8.615850e-47 |
| Msa0165220 | Msa1445080 | 0.820875 | 5.444712e-53 | -8.615850e-47 |
| Msa0166870 | Msa1445080 | 0.827103 | 1.882210e-54 | -8.615850e-47 |
| Msa0173990 | Msa1445080 | 0.802049 | 6.746830e-49 | -8.615850e-47 |
| Msa0188830 | Msa1445080 | 0.817110 | 3.908615e-52 | -8.615850e-47 |
| Msa0191250 | Msa1445080 | 0.831899 | 1.284756e-55 | -8.615850e-47 |
| Msa0197660 | Msa1445080 | 0.811481 | 6.851776e-51 | -8.615850e-47 |
| Msa0212990 | Msa1445080 | 0.805369 | 1.380239e-49 | -8.615850e-47 |
| Msa1224830 | Msa1445080 | 0.801450 | 8.951237e-49 | -8.615850e-47 |
| Msa1233500 | Msa1445080 | 0.800207 | 1.605790e-48 | -8.615850e-47 |
| Msa1233890 | Msa1445080 | 0.807756 | 4.327512e-50 | -8.615850e-47 |
| Msa1240180 | Msa1445080 | 0.808630 | 2.818663e-50 | -8.615850e-47 |
| Msa1240310 | Msa1445080 | 0.800718 | 1.263454e-48 | -8.615850e-47 |
| Msa1255290 | Msa1445080 | 0.803323 | 3.681980e-49 | -8.615850e-47 |
| Msa1261010 | Msa1445080 | 0.806317 | 8.722692e-50 | -8.615850e-47 |
| Msa1276660 | Msa1445080 | 0.800663 | 1.296610e-48 | -8.615850e-47 |
| Msa1280420 | Msa1445080 | 0.813061 | 3.097708e-51 | -8.615850e-47 |
| Msa1283860 | Msa1445080 | 0.804622 | 1.977759e-49 | -8.615850e-47 |
| Msa1297290 | Msa1445080 | 0.804802 | 1.813581e-49 | -8.615850e-47 |
| Msa1300490 | Msa1445080 | 0.820398 | 7.003893e-53 | -8.615850e-47 |
| Msa1308380 | Msa1445080 | 0.830123 | 3.505316e-55 | -8.615850e-47 |
| Msa1320620 | Msa1445080 | 0.824577 | 7.483925e-54 | -8.615850e-47 |
| Msa1320740 | Msa1445080 | 0.816988 | 4.163633e-52 | -8.615850e-47 |
| Msa1336110 | Msa1445080 | 0.819357 | 1.211951e-52 | -8.615850e-47 |
| Msa1343070 | Msa1445080 | 0.812947 | 3.280166e-51 | -8.615850e-47 |
| Msa0377550 | Msa1445080 | 0.813039 | 3.131651e-51 | -8.615850e-47 |
| Msa0389340 | Msa1445080 | 0.801565 | 8.481608e-49 | -8.615850e-47 |
| Msa0395870 | Msa1445080 | 0.807761 | 4.317204e-50 | -8.615850e-47 |
| Msa0410500 | Msa1445080 | 0.816884 | 4.391989e-52 | -8.615850e-47 |
| Msa0414170 | Msa1445080 | 0.812018 | 5.236225e-51 | -8.615850e-47 |
| Msa0417880 | Msa1445080 | 0.805163 | 1.523887e-49 | -8.615850e-47 |
| Msa0419820 | Msa1445080 | 0.810560 | 1.084826e-50 | -8.615850e-47 |
| Msa0433640 | Msa1445080 | 0.823700 | 1.202854e-53 | -8.615850e-47 |
| Msa0443880 | Msa1445080 | 0.804788 | 1.825706e-49 | -8.615850e-47 |
| Msa0453330 | Msa1445080 | 0.800628 | 1.318411e-48 | -8.615850e-47 |
| Msa0468290 | Msa1445080 | 0.805959 | 1.037406e-49 | -8.615850e-47 |
| Msa1027290 | Msa1445080 | 0.800648 | 1.306019e-48 | -8.615850e-47 |
| Msa1029250 | Msa1445080 | 0.809363 | 1.963938e-50 | -8.615850e-47 |
| Msa1041670 | Msa1445080 | 0.804092 | 2.550421e-49 | -8.615850e-47 |
| Msa1063950 | Msa1445080 | 0.835588 | 1.537594e-56 | -8.615850e-47 |
| Msa1082500 | Msa1445080 | 0.843682 | 1.206115e-58 | -8.615850e-47 |
| Msa1085300 | Msa1445080 | 0.807134 | 5.863124e-50 | -8.615850e-47 |
| Msa1087980 | Msa1445080 | 0.813542 | 2.427869e-51 | -8.615850e-47 |
| Msa1098400 | Msa1445080 | 0.809274 | 2.052120e-50 | -8.615850e-47 |
| Msa1104370 | Msa1445080 | 0.810065 | 1.387122e-50 | -8.615850e-47 |
| Msa0239800 | Msa1445080 | 0.815093 | 1.102858e-51 | -8.615850e-47 |
| Msa0241470 | Msa1445080 | 0.815532 | 8.808757e-52 | -8.615850e-47 |
| Msa0243100 | Msa1445080 | 0.805261 | 1.454001e-49 | -8.615850e-47 |
| Msa0244860 | Msa1445080 | 0.824427 | 8.120833e-54 | -8.615850e-47 |
| Msa0258760 | Msa1445080 | 0.820515 | 6.585275e-53 | -8.615850e-47 |
| Msa0270100 | Msa1445080 | 0.811397 | 7.146809e-51 | -8.615850e-47 |
| Msa0274360 | Msa1445080 | 0.805740 | 1.153466e-49 | -8.615850e-47 |
| Msa0279220 | Msa1445080 | 0.806846 | 6.745224e-50 | -8.615850e-47 |
| Msa0283450 | Msa1445080 | 0.815895 | 7.313556e-52 | -8.615850e-47 |
| Msa0283520 | Msa1445080 | 0.831198 | 1.912510e-55 | -8.615850e-47 |
| Msa0287310 | Msa1445080 | 0.804029 | 2.628511e-49 | -8.615850e-47 |
| Msa0287650 | Msa1445080 | 0.808562 | 2.914632e-50 | -8.615850e-47 |
| Msa0292120 | Msa1445080 | 0.814622 | 1.402513e-51 | -8.615850e-47 |
| Msa0309770 | Msa1445080 | 0.808550 | 2.930815e-50 | -8.615850e-47 |
| Msa0311860 | Msa1445080 | 0.820946 | 5.243155e-53 | -8.615850e-47 |
| Msa0317510 | Msa1445080 | 0.818080 | 2.362741e-52 | -8.615850e-47 |
| Msa0321860 | Msa1445080 | 0.809506 | 1.829274e-50 | -8.615850e-47 |
| Msa0323080 | Msa1445080 | 0.810989 | 8.759903e-51 | -8.615850e-47 |
| Msa0332000 | Msa1445080 | 0.822543 | 2.239975e-53 | -8.615850e-47 |
| Msa0347360 | Msa1445080 | 0.804390 | 2.210019e-49 | -8.615850e-47 |
| Msa0362780 | Msa1445080 | 0.808212 | 3.460366e-50 | -8.615850e-47 |
| Msa1108160 | Msa1445080 | 0.835977 | 1.225286e-56 | -8.615850e-47 |
| Msa1111110 | Msa1445080 | 0.803277 | 3.764710e-49 | -8.615850e-47 |
| Msa1111130 | Msa1445080 | 0.810830 | 9.481641e-51 | -8.615850e-47 |
| Msa1115430 | Msa1445080 | 0.807699 | 4.448743e-50 | -8.615850e-47 |
| Msa1117170 | Msa1445080 | 0.801207 | 1.003816e-48 | -8.615850e-47 |
| Msa1127650 | Msa1445080 | 0.823543 | 1.308820e-53 | -8.615850e-47 |
| Msa1133710 | Msa1445080 | 0.803337 | 3.657733e-49 | -8.615850e-47 |
| Msa1151910 | Msa1445080 | 0.813194 | 2.895653e-51 | -8.615850e-47 |
| Msa1165520 | Msa1445080 | 0.839733 | 1.328354e-57 | -8.615850e-47 |
| Msa1165740 | Msa1445080 | 0.806724 | 7.158480e-50 | -8.615850e-47 |
| Msa1166560 | Msa1445080 | 0.804063 | 2.586054e-49 | -8.615850e-47 |
| Msa1172400 | Msa1445080 | 0.813262 | 2.797793e-51 | -8.615850e-47 |
| Msa1185980 | Msa1445080 | 0.808370 | 3.202004e-50 | -8.615850e-47 |
| Msa1194920 | Msa1445080 | 0.808487 | 3.024071e-50 | -8.615850e-47 |
| Msa1199220 | Msa1445080 | 0.823676 | 1.218298e-53 | -8.615850e-47 |
| Msa1203250 | Msa1445080 | 0.804267 | 2.345157e-49 | -8.615850e-47 |
| Msa0484780 | Msa1445080 | 0.851101 | 1.105072e-60 | -8.615850e-47 |
| Msa0488560 | Msa1445080 | 0.813675 | 2.270499e-51 | -8.615850e-47 |
| Msa0503060 | Msa1445080 | 0.826795 | 2.229147e-54 | -8.615850e-47 |
| Msa0512870 | Msa1445080 | 0.849097 | 4.024362e-60 | -8.615850e-47 |
| Msa0521500 | Msa1445080 | 0.801492 | 8.776358e-49 | -8.615850e-47 |
| Msa0521540 | Msa1445080 | 0.824710 | 6.964885e-54 | -8.615850e-47 |
| Msa0521880 | Msa1445080 | 0.801710 | 7.919435e-49 | -8.615850e-47 |
| Msa0529890 | Msa1445080 | 0.804398 | 2.202360e-49 | -8.615850e-47 |
| Msa0571140 | Msa1445080 | 0.801434 | 9.019445e-49 | -8.615850e-47 |
| Msa0576690 | Msa1445080 | 0.806506 | 7.958237e-50 | -8.615850e-47 |
| Msa0579130 | Msa1445080 | 0.805701 | 1.175589e-49 | -8.615850e-47 |
| Msa0579200 | Msa1445080 | 0.803144 | 4.009615e-49 | -8.615850e-47 |
| Msa0844240 | Msa1445080 | 0.806512 | 7.934806e-50 | -8.615850e-47 |
| Msa0850960 | Msa1445080 | 0.833490 | 5.176943e-56 | -8.615850e-47 |
| Msa0856910 | Msa1445080 | 0.812639 | 3.832257e-51 | -8.615850e-47 |
| Msa0856920 | Msa1445080 | 0.820941 | 5.255509e-53 | -8.615850e-47 |
| Msa0863930 | Msa1445080 | 0.806140 | 9.504552e-50 | -8.615850e-47 |
| Msa0867890 | Msa1445080 | 0.837444 | 5.180797e-57 | -8.615850e-47 |
| Msa0880140 | Msa1445080 | 0.827578 | 1.447702e-54 | -8.615850e-47 |
| Msa0896750 | Msa1445080 | 0.812662 | 3.787835e-51 | -8.615850e-47 |
| Msa0908050 | Msa1445080 | 0.802747 | 4.844952e-49 | -8.615850e-47 |
| Msa0923330 | Msa1445080 | 0.808642 | 2.801289e-50 | -8.615850e-47 |
| Msa0925290 | Msa1445080 | 0.800659 | 1.298914e-48 | -8.615850e-47 |
| Msa0952120 | Msa1445080 | 0.810723 | 1.000305e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445080 | MtrunA17_Chr5g0433101 | 91.406 | 640 | 26 | 1 | 1 | 640 | 1 | 611 | 0.0 | 1204 |
| Msa1445080 | MtrunA17_Chr2g0303991 | 93.580 | 514 | 33 | 0 | 127 | 640 | 1 | 514 | 0.0 | 1008 |
| Msa1445080 | MtrunA17_Chr5g0433161 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 1.82e-72 | 232 |
| Msa1445080 | MtrunA17_Chr7g0236501 | 24.090 | 357 | 223 | 8 | 288 | 600 | 153 | 505 | 6.50e-22 | 99.8 |
| Msa1445080 | MtrunA17_Chr8g0382891 | 24.868 | 378 | 225 | 12 | 262 | 628 | 101 | 430 | 6.92e-20 | 93.2 |
| Msa1445080 | MtrunA17_Chr1g0147201 | 24.324 | 370 | 257 | 10 | 243 | 604 | 68 | 422 | 5.55e-18 | 87.0 |
| Msa1445080 | MtrunA17_Chr3g0099661 | 23.099 | 342 | 248 | 8 | 291 | 626 | 426 | 758 | 1.17e-17 | 87.4 |
| Msa1445080 | MtrunA17_Chr3g0099661 | 21.149 | 383 | 285 | 8 | 261 | 630 | 174 | 552 | 3.07e-13 | 73.2 |
| Msa1445080 | MtrunA17_Chr3g0089851 | 23.442 | 337 | 246 | 7 | 285 | 614 | 132 | 463 | 1.40e-17 | 86.3 |
| Msa1445080 | MtrunA17_Chr2g0331911 | 22.286 | 350 | 262 | 6 | 287 | 630 | 162 | 507 | 7.43e-17 | 84.3 |
| Msa1445080 | MtrunA17_Chr4g0069231 | 23.867 | 331 | 238 | 7 | 288 | 610 | 142 | 466 | 1.03e-15 | 80.1 |
| Msa1445080 | MtrunA17_Chr0c20g0493831 | 23.881 | 335 | 241 | 7 | 288 | 614 | 142 | 470 | 1.24e-15 | 80.1 |
| Msa1445080 | MtrunA17_Chr3g0141651 | 50.000 | 66 | 32 | 1 | 48 | 113 | 49 | 113 | 2.04e-15 | 75.5 |
| Msa1445080 | MtrunA17_Chr8g0369641 | 27.749 | 191 | 132 | 5 | 288 | 473 | 597 | 786 | 3.12e-14 | 76.3 |
| Msa1445080 | MtrunA17_Chr3g0136851 | 21.534 | 339 | 246 | 7 | 304 | 632 | 219 | 547 | 1.54e-13 | 74.3 |
| Msa1445080 | MtrunA17_Chr4g0059671 | 29.319 | 191 | 124 | 5 | 286 | 469 | 139 | 325 | 1.71e-13 | 73.9 |
| Msa1445080 | MtrunA17_Chr4g0059671 | 28.571 | 161 | 113 | 2 | 288 | 447 | 282 | 441 | 3.09e-11 | 66.6 |
| Msa1445080 | MtrunA17_Chr5g0395201 | 28.409 | 176 | 121 | 3 | 281 | 455 | 424 | 595 | 2.22e-13 | 73.6 |
| Msa1445080 | MtrunA17_Chr1g0210801 | 22.364 | 313 | 222 | 8 | 288 | 591 | 213 | 513 | 2.91e-13 | 72.8 |
| Msa1445080 | MtrunA17_Chr1g0210801 | 21.186 | 354 | 233 | 7 | 271 | 614 | 149 | 466 | 7.47e-11 | 65.1 |
| Msa1445080 | MtrunA17_Chr3g0118171 | 29.064 | 203 | 136 | 5 | 280 | 476 | 197 | 397 | 4.37e-13 | 72.0 |
| Msa1445080 | MtrunA17_Chr6g0458411 | 35.246 | 122 | 76 | 2 | 321 | 441 | 271 | 390 | 4.97e-13 | 72.0 |
| Msa1445080 | MtrunA17_Chr6g0458411 | 22.817 | 355 | 221 | 9 | 296 | 640 | 208 | 519 | 4.11e-12 | 69.3 |
| Msa1445080 | MtrunA17_Chr2g0297991 | 22.741 | 343 | 242 | 7 | 303 | 634 | 291 | 621 | 2.49e-12 | 70.1 |
| Msa1445080 | MtrunA17_Chr7g0215561 | 25.000 | 272 | 183 | 9 | 296 | 555 | 284 | 546 | 3.76e-12 | 69.7 |
| Msa1445080 | MtrunA17_Chr5g0412071 | 22.973 | 370 | 263 | 10 | 275 | 632 | 318 | 677 | 4.94e-12 | 69.3 |
| Msa1445080 | MtrunA17_Chr7g0257371 | 22.830 | 311 | 230 | 7 | 292 | 597 | 474 | 779 | 7.21e-12 | 68.9 |
| Msa1445080 | MtrunA17_Chr7g0214351 | 24.908 | 273 | 182 | 9 | 296 | 555 | 285 | 547 | 7.58e-12 | 68.6 |
| Msa1445080 | MtrunA17_Chr1g0147171 | 28.105 | 153 | 107 | 2 | 301 | 453 | 339 | 488 | 9.07e-12 | 68.2 |
| Msa1445080 | MtrunA17_Chr5g0434021 | 24.638 | 207 | 147 | 4 | 267 | 470 | 487 | 687 | 9.13e-12 | 68.6 |
| Msa1445080 | MtrunA17_Chr3g0143851 | 23.442 | 337 | 242 | 8 | 288 | 615 | 212 | 541 | 9.88e-12 | 68.2 |
| Msa1445080 | MtrunA17_Chr1g0160881 | 33.537 | 164 | 99 | 5 | 296 | 453 | 496 | 655 | 1.28e-11 | 67.8 |
| Msa1445080 | MtrunA17_Chr3g0143411 | 26.946 | 167 | 119 | 3 | 288 | 453 | 146 | 310 | 1.33e-11 | 67.4 |
| Msa1445080 | MtrunA17_Chr7g0231941 | 28.641 | 206 | 120 | 6 | 288 | 476 | 227 | 422 | 3.53e-11 | 66.2 |
| Msa1445080 | MtrunA17_Chr8g0375231 | 23.123 | 333 | 219 | 6 | 301 | 632 | 270 | 566 | 3.68e-11 | 66.2 |
| Msa1445080 | MtrunA17_Chr7g0218641 | 30.256 | 195 | 130 | 4 | 264 | 454 | 316 | 508 | 6.75e-11 | 65.1 |
| Msa1445080 | MtrunA17_Chr5g0419551 | 27.848 | 158 | 111 | 3 | 284 | 439 | 423 | 579 | 7.96e-11 | 65.1 |
| Msa1445080 | MtrunA17_Chr6g0478551 | 27.749 | 191 | 134 | 3 | 287 | 474 | 339 | 528 | 8.69e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1445080 | AT2G30780.2 | 44.595 | 444 | 227 | 5 | 192 | 630 | 22 | 451 | 5.38e-133 | 398 |
| Msa1445080 | AT2G30780.1 | 44.595 | 444 | 227 | 5 | 192 | 630 | 22 | 451 | 5.38e-133 | 398 |
| Msa1445080 | AT2G48000.1 | 43.607 | 438 | 227 | 8 | 203 | 632 | 43 | 468 | 1.95e-114 | 351 |
| Msa1445080 | AT5G10860.1 | 70.175 | 114 | 33 | 1 | 1 | 113 | 1 | 114 | 2.48e-51 | 176 |
| Msa1445080 | AT5G48730.1 | 26.377 | 345 | 240 | 7 | 288 | 624 | 153 | 491 | 2.16e-22 | 101 |
| Msa1445080 | AT3G53170.4 | 25.281 | 356 | 252 | 7 | 288 | 635 | 97 | 446 | 1.51e-19 | 92.4 |
| Msa1445080 | AT4G39620.1 | 29.752 | 242 | 149 | 9 | 262 | 494 | 117 | 346 | 1.22e-18 | 90.1 |
| Msa1445080 | AT4G39620.1 | 25.490 | 204 | 145 | 4 | 292 | 489 | 215 | 417 | 3.52e-14 | 76.3 |
| Msa1445080 | AT4G39620.2 | 28.082 | 292 | 185 | 11 | 214 | 494 | 69 | 346 | 1.27e-18 | 90.1 |
| Msa1445080 | AT4G39620.2 | 25.490 | 204 | 145 | 4 | 292 | 489 | 215 | 417 | 3.82e-14 | 75.9 |
| Msa1445080 | AT3G53170.2 | 24.933 | 373 | 259 | 9 | 262 | 626 | 128 | 487 | 1.42e-18 | 89.7 |
| Msa1445080 | AT3G53170.1 | 24.933 | 373 | 259 | 9 | 262 | 626 | 128 | 487 | 1.42e-18 | 89.7 |
| Msa1445080 | AT3G53170.3 | 25.166 | 302 | 207 | 8 | 262 | 552 | 128 | 421 | 3.91e-16 | 82.0 |
| Msa1445080 | AT1G74850.1 | 30.412 | 194 | 124 | 5 | 286 | 472 | 142 | 331 | 4.46e-15 | 79.7 |
| Msa1445080 | AT3G16010.1 | 21.569 | 357 | 268 | 6 | 289 | 638 | 166 | 517 | 6.01e-15 | 79.0 |
| Msa1445080 | AT2G35130.3 | 26.667 | 210 | 147 | 4 | 288 | 494 | 299 | 504 | 2.63e-14 | 76.6 |
| Msa1445080 | AT2G35130.1 | 26.230 | 244 | 163 | 7 | 288 | 520 | 302 | 539 | 2.79e-14 | 76.6 |
| Msa1445080 | AT2G35130.2 | 26.667 | 210 | 147 | 4 | 288 | 494 | 324 | 529 | 3.38e-14 | 76.3 |
| Msa1445080 | AT1G03560.1 | 27.230 | 213 | 147 | 5 | 354 | 562 | 186 | 394 | 3.98e-14 | 76.3 |
| Msa1445080 | AT1G47271.1 | 39.583 | 96 | 57 | 1 | 18 | 113 | 7 | 101 | 4.01e-14 | 72.0 |
| Msa1445080 | AT3G06430.1 | 27.700 | 213 | 144 | 6 | 288 | 495 | 127 | 334 | 5.61e-14 | 75.1 |
| Msa1445080 | AT3G06430.1 | 28.313 | 166 | 118 | 1 | 288 | 452 | 198 | 363 | 3.91e-13 | 72.8 |
| Msa1445080 | AT4G11690.2 | 26.872 | 227 | 149 | 7 | 296 | 512 | 180 | 399 | 4.17e-13 | 72.8 |
| Msa1445080 | AT2G17140.1 | 23.499 | 383 | 265 | 10 | 262 | 630 | 128 | 496 | 4.68e-13 | 73.2 |
| Msa1445080 | AT2G17140.2 | 23.499 | 383 | 265 | 10 | 262 | 630 | 128 | 496 | 4.68e-13 | 73.2 |
| Msa1445080 | AT4G11690.1 | 26.872 | 227 | 149 | 7 | 296 | 512 | 207 | 426 | 5.19e-13 | 72.4 |
| Msa1445080 | AT5G50280.1 | 29.609 | 179 | 121 | 5 | 310 | 484 | 369 | 546 | 9.79e-13 | 72.0 |
| Msa1445080 | AT1G09820.1 | 24.375 | 320 | 221 | 9 | 321 | 629 | 225 | 534 | 1.30e-12 | 71.2 |
| Msa1445080 | AT1G12300.1 | 24.126 | 286 | 193 | 9 | 232 | 509 | 215 | 484 | 4.47e-12 | 69.7 |
| Msa1445080 | AT1G74900.1 | 29.936 | 157 | 108 | 2 | 288 | 443 | 233 | 388 | 5.78e-12 | 68.9 |
| Msa1445080 | AT1G63070.1 | 24.818 | 274 | 155 | 7 | 242 | 472 | 210 | 475 | 6.16e-12 | 68.9 |
| Msa1445080 | AT1G12775.1 | 26.818 | 220 | 144 | 8 | 283 | 494 | 261 | 471 | 6.16e-12 | 69.3 |
| Msa1445080 | AT1G20300.1 | 22.109 | 294 | 201 | 9 | 286 | 571 | 152 | 425 | 1.69e-11 | 67.8 |
| Msa1445080 | AT1G12700.1 | 29.012 | 162 | 113 | 2 | 288 | 448 | 231 | 391 | 2.73e-11 | 67.0 |
| Msa1445080 | AT1G12700.3 | 29.012 | 162 | 113 | 2 | 288 | 448 | 247 | 407 | 2.86e-11 | 67.0 |
| Msa1445080 | AT1G12700.2 | 29.012 | 162 | 113 | 2 | 288 | 448 | 247 | 407 | 2.86e-11 | 67.0 |
| Msa1445080 | AT5G02860.1 | 19.531 | 384 | 253 | 10 | 291 | 630 | 393 | 764 | 3.79e-11 | 67.0 |
| Msa1445080 | AT5G02860.4 | 19.531 | 384 | 253 | 10 | 291 | 630 | 393 | 764 | 3.79e-11 | 67.0 |
| Msa1445080 | AT5G02860.2 | 19.531 | 384 | 253 | 10 | 291 | 630 | 393 | 764 | 3.79e-11 | 67.0 |
| Msa1445080 | AT5G02860.5 | 19.531 | 384 | 253 | 10 | 291 | 630 | 393 | 764 | 3.79e-11 | 67.0 |
| Msa1445080 | AT5G02860.3 | 19.531 | 384 | 253 | 10 | 291 | 630 | 393 | 764 | 3.79e-11 | 67.0 |
| Msa1445080 | AT1G73710.1 | 27.811 | 169 | 120 | 2 | 287 | 454 | 517 | 684 | 5.17e-11 | 66.6 |
| Msa1445080 | AT5G39980.1 | 23.580 | 352 | 204 | 9 | 288 | 591 | 263 | 597 | 5.63e-11 | 66.2 |
| Msa1445080 | AT1G64580.1 | 29.534 | 193 | 124 | 6 | 296 | 480 | 193 | 381 | 5.76e-11 | 65.9 |
| Msa1445080 | AT1G64583.2 | 28.333 | 180 | 123 | 5 | 296 | 470 | 160 | 338 | 5.93e-11 | 65.9 |
| Msa1445080 | AT1G64583.1 | 28.333 | 180 | 123 | 5 | 296 | 470 | 185 | 363 | 6.10e-11 | 65.9 |
| Msa1445080 | AT4G19440.4 | 30.270 | 185 | 124 | 4 | 273 | 453 | 608 | 791 | 6.52e-11 | 66.2 |
| Msa1445080 | AT4G19440.2 | 30.270 | 185 | 124 | 4 | 273 | 453 | 608 | 791 | 6.52e-11 | 66.2 |
| Msa1445080 | AT4G19440.3 | 30.270 | 185 | 124 | 4 | 273 | 453 | 608 | 791 | 6.52e-11 | 66.2 |
| Msa1445080 | AT4G19440.1 | 30.270 | 185 | 124 | 4 | 273 | 453 | 608 | 791 | 6.52e-11 | 66.2 |
| Msa1445080 | AT3G59040.1 | 25.907 | 193 | 136 | 4 | 297 | 486 | 259 | 447 | 6.91e-11 | 65.9 |
| Msa1445080 | AT2G18940.1 | 22.024 | 336 | 245 | 8 | 307 | 634 | 268 | 594 | 6.99e-11 | 65.9 |
| Msa1445080 | AT2G15980.1 | 22.439 | 205 | 151 | 4 | 319 | 518 | 245 | 446 | 7.97e-11 | 65.5 |
| Msa1445080 | AT3G59040.2 | 25.389 | 193 | 137 | 3 | 297 | 486 | 266 | 454 | 9.70e-11 | 65.5 |
| Msa1445080 | AT3G22470.1 | 24.088 | 274 | 180 | 10 | 232 | 494 | 197 | 453 | 9.88e-11 | 65.5 |
Find 199 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAGGGTTTCATATATTT+TGG | 0.108973 | tig0030941:-8409 | Msa1445080:CDS |
| CTCTTCTTTAGGAATGTTTA+TGG | 0.119753 | tig0030941:-4437 | Msa1445080:three_prime_UTR |
| CTTGATGGTATTTGCCTATT+TGG | 0.140078 | tig0030941:+6077 | None:intergenic |
| TCCACTTATAATTATTTAAT+TGG | 0.148085 | tig0030941:-7172 | Msa1445080:CDS |
| TCTTGCTGTTGAGCTATTTA+AGG | 0.156876 | tig0030941:-7437 | Msa1445080:CDS |
| TCAACTTTCAGGTGATTAAT+TGG | 0.180104 | tig0030941:-7564 | Msa1445080:intron |
| ATTTAAGGAGGCAGAATTTA+AGG | 0.185625 | tig0030941:-7422 | Msa1445080:CDS |
| GGTATGCAATTCGTTGAATT+TGG | 0.187999 | tig0030941:+8665 | None:intergenic |
| ATAATAATACCTCAAGTAAA+AGG | 0.201277 | tig0030941:+8310 | None:intergenic |
| GGTATTTGTTCGGTGGATTC+TGG | 0.206398 | tig0030941:+8531 | None:intergenic |
| CCTCTTTGAAAGGCAAATTT+TGG | 0.256443 | tig0030941:+4560 | None:intergenic |
| CAAAGATAATACTCTTCTTT+AGG | 0.256834 | tig0030941:-4448 | Msa1445080:three_prime_UTR |
| AGAGGATAAAGTCGCAATTT+TGG | 0.257986 | tig0030941:-8463 | Msa1445080:CDS |
| CACCTTTCCTTTACTGACTT+TGG | 0.260798 | tig0030941:+4750 | None:intergenic |
| CTAAAACTGTAGACAAATTC+AGG | 0.263730 | tig0030941:+6343 | None:intergenic |
| TAAACGACATGCCAATTATC+AGG | 0.267402 | tig0030941:-6979 | Msa1445080:CDS |
| GTGTAGCTTCTGATTATGTT+AGG | 0.292755 | tig0030941:-8425 | Msa1445080:CDS |
| TTTGTTTCTCGACATGAAAA+AGG | 0.297098 | tig0030941:-7323 | Msa1445080:CDS |
| CACTTGGATGTGGGGTGATA+TGG | 0.305183 | tig0030941:-7137 | Msa1445080:CDS |
| CTGCAGCTAGCAAATGGTTT+TGG | 0.307390 | tig0030941:+5981 | None:intergenic |
| CAGCACTTACAATGCACTAA+TGG | 0.312427 | tig0030941:-7386 | Msa1445080:CDS |
| AACGATCACCGGCTAGAATA+TGG | 0.313359 | tig0030941:+4727 | None:intergenic |
| CGTTGAATATATTTGATGAT+TGG | 0.313827 | tig0030941:-6302 | Msa1445080:three_prime_UTR |
| GTGCTGATGGTTCTTGGCTT+TGG | 0.314888 | tig0030941:-8980 | Msa1445080:CDS |
| CATATCATAACCCTGATAAT+TGG | 0.322842 | tig0030941:+6968 | None:intergenic |
| ACCTTTCCTTTACTGACTTT+GGG | 0.323926 | tig0030941:+4751 | None:intergenic |
| ATGGAATGTGATAGTGAAAA+TGG | 0.329548 | tig0030941:-6026 | Msa1445080:three_prime_UTR |
| ACTAGGTCTAAGACCTTGTT+TGG | 0.330658 | tig0030941:+8588 | None:intergenic |
| TTCAAAAGTTGAATATAAAC+AGG | 0.331137 | tig0030941:+8354 | None:intergenic |
| GCGACTTTATCCTCTTGATT+TGG | 0.334524 | tig0030941:+8471 | None:intergenic |
| GTAAAGGTGCTGATGGTTCT+TGG | 0.335998 | tig0030941:-8986 | Msa1445080:CDS |
| GCAAAATGTCCTTGAGGAAA+TGG | 0.336938 | tig0030941:-6591 | Msa1445080:CDS |
| TGAAAATTGGAAAATGAGAT+TGG | 0.341730 | tig0030941:-5761 | Msa1445080:three_prime_UTR |
| CAGAATTCTGAATATTTGAT+TGG | 0.347821 | tig0030941:-8384 | Msa1445080:CDS |
| TGTTTATGATGCTGTCAAAT+TGG | 0.347937 | tig0030941:-8940 | Msa1445080:intron |
| AATGATTTATCAACAGGATT+AGG | 0.348504 | tig0030941:-4623 | Msa1445080:three_prime_UTR |
| ACCAGACGTTCTGTACTTGC+AGG | 0.350513 | tig0030941:-6686 | Msa1445080:CDS |
| GAACGCACCACTCACCAAAT+AGG | 0.358076 | tig0030941:-6091 | Msa1445080:three_prime_UTR |
| CATAACCACGAATCATTAAC+AGG | 0.359090 | tig0030941:+7059 | None:intergenic |
| TTATGCACACTTGGGTAATC+TGG | 0.359557 | tig0030941:-7041 | Msa1445080:CDS |
| GCCAAATGGACTTCTTCAAC+TGG | 0.360392 | tig0030941:-6221 | Msa1445080:three_prime_UTR |
| TAATTATAAGTGGATATATT+AGG | 0.366802 | tig0030941:+7181 | None:intergenic |
| AATGACAATGATTTATCAAC+AGG | 0.367089 | tig0030941:-4629 | Msa1445080:three_prime_UTR |
| ATGTTCTCATTCAATCTTGA+TGG | 0.372642 | tig0030941:+6062 | None:intergenic |
| GGAAAACTGTTTGGAGGAAA+TGG | 0.385760 | tig0030941:-6825 | Msa1445080:CDS |
| TTATGCCGAGGAAAACTGTT+TGG | 0.389812 | tig0030941:-6834 | Msa1445080:CDS |
| GACCAGCTTAGAATGATATA+AGG | 0.396323 | tig0030941:+6646 | None:intergenic |
| GGATAATGTACAAAGCTTAC+TGG | 0.397961 | tig0030941:-6532 | Msa1445080:CDS |
| GCAATTGATTTCTCCTCCCC+TGG | 0.398515 | tig0030941:+8789 | None:intergenic |
| TAATAAAAGCATTCCTTGTA+AGG | 0.412666 | tig0030941:-6151 | Msa1445080:three_prime_UTR |
| AGGATAACTGCGTGAACATT+TGG | 0.414975 | tig0030941:+8743 | None:intergenic |
| GATATATCTCCACTTGGATG+TGG | 0.417294 | tig0030941:-7147 | Msa1445080:CDS |
| TCAGACATCTTGCAAGGAAA+AGG | 0.429987 | tig0030941:-9008 | Msa1445080:CDS |
| AGGCAAAGCTTTGGACTTGA+AGG | 0.433387 | tig0030941:-4537 | Msa1445080:three_prime_UTR |
| CCCAGTTGAAGAAGTCCATT+TGG | 0.433970 | tig0030941:+6220 | None:intergenic |
| CCTTTACTGACTTTGGGTAG+TGG | 0.434297 | tig0030941:+4757 | None:intergenic |
| ACCAATTAAATAATTATAAG+TGG | 0.435009 | tig0030941:+7171 | None:intergenic |
| TTTAAGGAGGCAGAATTTAA+GGG | 0.435939 | tig0030941:-7421 | Msa1445080:CDS |
| GACGTGGTTTGGTATTTGTT+CGG | 0.439274 | tig0030941:+8521 | None:intergenic |
| ATTTGATGATTGGATTGGAT+TGG | 0.446876 | tig0030941:-6292 | Msa1445080:three_prime_UTR |
| AGCACTTACAATGCACTAAT+GGG | 0.449145 | tig0030941:-7385 | Msa1445080:CDS |
| ACTTACCTGTTAATGATTCG+TGG | 0.449598 | tig0030941:-7064 | Msa1445080:CDS |
| AGCCGGTGATCGTTTATGAT+AGG | 0.450149 | tig0030941:-4718 | Msa1445080:three_prime_UTR |
| TCAAAGAGGAGGCAAAGCTT+TGG | 0.451398 | tig0030941:-4546 | Msa1445080:three_prime_UTR |
| AATATATTTGATGATTGGAT+TGG | 0.451802 | tig0030941:-6297 | Msa1445080:three_prime_UTR |
| TGTAGCTTCTGATTATGTTA+GGG | 0.451827 | tig0030941:-8424 | Msa1445080:CDS |
| ACTTTATCCTCTTGATTTGG+AGG | 0.451985 | tig0030941:+8474 | None:intergenic |
| GGGGAGGAGAAATCAATTGC+TGG | 0.452072 | tig0030941:-8786 | Msa1445080:CDS |
| ACTTATAATTATTTAATTGG+TGG | 0.454534 | tig0030941:-7169 | Msa1445080:CDS |
| GGTGGATTCTGGATTTGAAA+TGG | 0.455261 | tig0030941:+8542 | None:intergenic |
| CGAATATCGTTTGATGAATG+TGG | 0.457956 | tig0030941:+8632 | None:intergenic |
| ACAAGGTCTAAGACGTGGTT+TGG | 0.458972 | tig0030941:+8510 | None:intergenic |
| CCCTGCAAGTACAGAACGTC+TGG | 0.460643 | tig0030941:+6685 | None:intergenic |
| CATTCTAAGCTGGTCATGTA+TGG | 0.463012 | tig0030941:-6638 | Msa1445080:CDS |
| TTATGATGGAAATGCATCAA+TGG | 0.464137 | tig0030941:+6442 | None:intergenic |
| CTCAGCAATATAAATTATGA+TGG | 0.465846 | tig0030941:+6428 | None:intergenic |
| CTTGGGTAATCTGGAGAAGA+TGG | 0.466453 | tig0030941:-7032 | Msa1445080:CDS |
| TATGATGGAAATGCATCAAT+GGG | 0.473788 | tig0030941:+6443 | None:intergenic |
| ACAAAACAATGTTGGAGCTT+TGG | 0.474704 | tig0030941:-8823 | Msa1445080:CDS |
| TCAAACCGTGAAAAGGCAAC+TGG | 0.475093 | tig0030941:+9083 | None:intergenic |
| CCAAATGGACTTCTTCAACT+GGG | 0.477458 | tig0030941:-6220 | Msa1445080:three_prime_UTR |
| TCCATCTTCTTAGAGTGTGA+TGG | 0.481799 | tig0030941:-5912 | Msa1445080:three_prime_UTR |
| AAAGATATATTCGCTGGTAA+AGG | 0.483944 | tig0030941:-7008 | Msa1445080:CDS |
| TGCAACTGAGAAACACTTGA+AGG | 0.485388 | tig0030941:+4399 | None:intergenic |
| GCCATCACACTCTAAGAAGA+TGG | 0.486403 | tig0030941:+5911 | None:intergenic |
| ACTTAATTTACATACAGTAC+TGG | 0.490613 | tig0030941:-4325 | Msa1445080:three_prime_UTR |
| CCAAAATTTGCCTTTCAAAG+AGG | 0.493003 | tig0030941:-4560 | Msa1445080:three_prime_UTR |
| CATTAGTGCATTGTAAGTGC+TGG | 0.496635 | tig0030941:+7387 | None:intergenic |
| CAAGAACTGCAGCTAGCAAA+TGG | 0.497033 | tig0030941:+5975 | None:intergenic |
| AGCTTTGCCTCCTCTTTGAA+AGG | 0.497065 | tig0030941:+4550 | None:intergenic |
| TGCTACACCTGCTCGTATTG+AGG | 0.498372 | tig0030941:-9057 | Msa1445080:CDS |
| GCTTTGGTGGTCGTGAAACC+AGG | 0.501681 | tig0030941:-8807 | Msa1445080:CDS |
| CAAATGGACTTCTTCAACTG+GGG | 0.503432 | tig0030941:-6219 | Msa1445080:three_prime_UTR |
| AAGGCAACTGGCTGCAACAA+GGG | 0.505517 | tig0030941:+9095 | None:intergenic |
| GCTGGAATTATTGCAGAAAG+AGG | 0.505878 | tig0030941:-8768 | Msa1445080:CDS |
| GATTCGTGGTTATGCACACT+TGG | 0.507360 | tig0030941:-7050 | Msa1445080:CDS |
| TGCCGAGGAAAACTGTTTGG+AGG | 0.507545 | tig0030941:-6831 | Msa1445080:CDS |
| AAACAATGTTGGAGCTTTGG+TGG | 0.508153 | tig0030941:-8820 | Msa1445080:CDS |
| GAATATCGTTTGATGAATGT+GGG | 0.509169 | tig0030941:+8633 | None:intergenic |
| GGAGGAGTTCATGCAGGTAA+TGG | 0.510135 | tig0030941:-5740 | Msa1445080:three_prime_UTR |
| ATGGGTGCTTATATGTTCAA+TGG | 0.512023 | tig0030941:-7367 | Msa1445080:CDS |
| ACTCTAGCATACTGAGCAGC+AGG | 0.512185 | tig0030941:+4587 | None:intergenic |
| AGTGGATATATTAGGTGCAA+GGG | 0.513961 | tig0030941:+7189 | None:intergenic |
| TACCTACATATTATTTGAGA+TGG | 0.516488 | tig0030941:+6193 | None:intergenic |
| GAGTTGTGGTCAGAGATCCT+TGG | 0.518472 | tig0030941:-6510 | Msa1445080:CDS |
| GATGGAAAAGATATATTCGC+TGG | 0.518484 | tig0030941:-7014 | Msa1445080:CDS |
| GGATTTGAAATGGATGTTGA+AGG | 0.518696 | tig0030941:+8552 | None:intergenic |
| TTGGGTAGTGGAATTATCCA+TGG | 0.518936 | tig0030941:+4769 | None:intergenic |
| CTCCTTATATCATTCTAAGC+TGG | 0.521166 | tig0030941:-6648 | Msa1445080:CDS |
| ACAGAACATGTTTATAGATA+CGG | 0.521432 | tig0030941:+6385 | None:intergenic |
| TAATAATACCTCAAGTAAAA+GGG | 0.524445 | tig0030941:+8311 | None:intergenic |
| TTCAGGTGATTAATTGGAGA+AGG | 0.524903 | tig0030941:-7558 | Msa1445080:intron |
| ATATATCTCCACTTGGATGT+GGG | 0.525177 | tig0030941:-7146 | Msa1445080:CDS |
| AGCAGACTCAAACCGTGAAA+AGG | 0.527310 | tig0030941:+9076 | None:intergenic |
| TCACATGGAAGCAACATTCA+AGG | 0.532551 | tig0030941:-7227 | Msa1445080:CDS |
| GGAAAAGACAACTGGCTGTA+CGG | 0.532686 | tig0030941:-5792 | Msa1445080:three_prime_UTR |
| ACTGCAAATTCACCCTTACA+AGG | 0.533336 | tig0030941:+6138 | None:intergenic |
| CCACTACCCAAAGTCAGTAA+AGG | 0.535147 | tig0030941:-4757 | Msa1445080:three_prime_UTR |
| TCAAAGGGCATTAAAGCTGC+AGG | 0.537663 | tig0030941:-7478 | Msa1445080:CDS |
| ATGTCCTTGAGGAAATGGAT+AGG | 0.538946 | tig0030941:-6586 | Msa1445080:CDS |
| CTTGATGCTCACTGATCACA+TGG | 0.540039 | tig0030941:-7242 | Msa1445080:CDS |
| AAATTTGCCTTTCAAAGAGG+AGG | 0.540297 | tig0030941:-4557 | Msa1445080:three_prime_UTR |
| TTGGATTGGATTGCATTCAA+AGG | 0.540457 | tig0030941:-6278 | Msa1445080:three_prime_UTR |
| AAGAATGTGGAAAAGACAAC+TGG | 0.541264 | tig0030941:-5800 | Msa1445080:three_prime_UTR |
| GATGAATGTGGGATTCGAAA+GGG | 0.541844 | tig0030941:+8644 | None:intergenic |
| AGCTGCAGTTCTTGAGATGT+CGG | 0.544851 | tig0030941:-5966 | Msa1445080:three_prime_UTR |
| GTGGTTTGGTATTTGTTCGG+TGG | 0.549858 | tig0030941:+8524 | None:intergenic |
| CAGATGACACAAAACAATGT+TGG | 0.553982 | tig0030941:-8831 | Msa1445080:CDS |
| CATCATAATTTATATTGCTG+AGG | 0.554019 | tig0030941:-6427 | Msa1445080:exon |
| AAGGTTTGAGAAATGAAACT+AGG | 0.554501 | tig0030941:+8571 | None:intergenic |
| AAGTGGATATATTAGGTGCA+AGG | 0.555542 | tig0030941:+7188 | None:intergenic |
| TACAAAGCTTACTGGAGTTG+TGG | 0.556468 | tig0030941:-6524 | Msa1445080:CDS |
| TGTCCTTGAGGAAATGGATA+GGG | 0.556871 | tig0030941:-6585 | Msa1445080:CDS |
| GCATGCACATGAGTATTCAA+AGG | 0.559247 | tig0030941:-7494 | Msa1445080:CDS |
| CATGCACATGAGTATTCAAA+GGG | 0.559981 | tig0030941:-7493 | Msa1445080:CDS |
| ATCAACAACACATTTAACCA+TGG | 0.560049 | tig0030941:+6863 | None:intergenic |
| GAAAAGACAACTGGCTGTAC+GGG | 0.562405 | tig0030941:-5791 | Msa1445080:three_prime_UTR |
| ATCCTATCATAAACGATCAC+CGG | 0.563205 | tig0030941:+4716 | None:intergenic |
| TAACGACCATGGGTATTATG+AGG | 0.563678 | tig0030941:-6763 | Msa1445080:CDS |
| AATGGATAATGCAATAAATG+AGG | 0.564725 | tig0030941:-6807 | Msa1445080:CDS |
| TGATGAATGTGGGATTCGAA+AGG | 0.564829 | tig0030941:+8643 | None:intergenic |
| TGTTTCATTGTTGATGGTGA+AGG | 0.566920 | tig0030941:+8723 | None:intergenic |
| TGAATACTCATGTGCATGCA+TGG | 0.567224 | tig0030941:+7498 | None:intergenic |
| ATCTTGCAAGGAAAAGGTAA+AGG | 0.570122 | tig0030941:-9002 | Msa1445080:CDS |
| TTGCAAGATGTCTGAAATTG+TGG | 0.570234 | tig0030941:+9016 | None:intergenic |
| GCAACAGAAGGATAGCAAGT+TGG | 0.570562 | tig0030941:+7298 | None:intergenic |
| GTATTTGCCTATTTGGTGAG+TGG | 0.571782 | tig0030941:+6084 | None:intergenic |
| CCATGCTCCTCAATACGAGC+AGG | 0.573052 | tig0030941:+9050 | None:intergenic |
| GAGATAGATACTTGAAACCA+TGG | 0.574353 | tig0030941:-4786 | Msa1445080:three_prime_UTR |
| TACCATCTCAAATAATATGT+AGG | 0.578630 | tig0030941:-6195 | Msa1445080:three_prime_UTR |
| CCAGACGTTCTGTACTTGCA+GGG | 0.579635 | tig0030941:-6685 | Msa1445080:CDS |
| GAGATTGGAGGAGTTCATGC+AGG | 0.579734 | tig0030941:-5746 | Msa1445080:three_prime_UTR |
| AAATAAAATGAATAAAGTAA+AGG | 0.580387 | tig0030941:-6921 | Msa1445080:CDS |
| GGAAAAGGTAAAGGTGCTGA+TGG | 0.584293 | tig0030941:-8993 | Msa1445080:CDS |
| AATAAAAGCATTCCTTGTAA+GGG | 0.587576 | tig0030941:-6150 | Msa1445080:three_prime_UTR |
| ACAATTTCAGACATCTTGCA+AGG | 0.588745 | tig0030941:-9014 | Msa1445080:CDS |
| GTTCAAACCTCCAAATCAAG+AGG | 0.589014 | tig0030941:-8481 | Msa1445080:CDS |
| AAAGGCAACTGGCTGCAACA+AGG | 0.589130 | tig0030941:+9094 | None:intergenic |
| GAACATGACCTCTGTTGTGA+TGG | 0.592961 | tig0030941:-6045 | Msa1445080:three_prime_UTR |
| GAAAGGTGCCATATTCTAGC+CGG | 0.594557 | tig0030941:-4735 | Msa1445080:three_prime_UTR |
| GGTATGCATCAATTTGCTGC+TGG | 0.600780 | tig0030941:-6174 | Msa1445080:three_prime_UTR |
| TGCTGTTGAGCTATTTAAGG+AGG | 0.601828 | tig0030941:-7434 | Msa1445080:CDS |
| TGACCCTATCCATTTCCTCA+AGG | 0.605293 | tig0030941:+6582 | None:intergenic |
| AGAACCGTTGTAACGACCAT+GGG | 0.607083 | tig0030941:-6773 | Msa1445080:CDS |
| AAATTGGAAAATGAGATTGG+AGG | 0.607600 | tig0030941:-5758 | Msa1445080:three_prime_UTR |
| ACCCAAAGTCAGTAAAGGAA+AGG | 0.610531 | tig0030941:-4752 | Msa1445080:three_prime_UTR |
| AAACGACATGCCAATTATCA+GGG | 0.611162 | tig0030941:-6978 | Msa1445080:CDS |
| TATTAGACAGCCAAAATGCA+AGG | 0.612518 | tig0030941:-9191 | None:intergenic |
| GTTGATTAAGCTTTATGCCG+AGG | 0.612748 | tig0030941:-6846 | Msa1445080:CDS |
| TTGGTGGATATATCTCCACT+TGG | 0.613423 | tig0030941:-7153 | Msa1445080:CDS |
| TTGGGACAAATGTTCAAGCA+TGG | 0.616380 | tig0030941:-6476 | Msa1445080:CDS |
| CAGAACCGTTGTAACGACCA+TGG | 0.617197 | tig0030941:-6774 | Msa1445080:CDS |
| TATATCTCCACTTGGATGTG+GGG | 0.624895 | tig0030941:-7145 | Msa1445080:CDS |
| CCTGCTCGTATTGAGGAGCA+TGG | 0.625826 | tig0030941:-9050 | Msa1445080:CDS |
| CTTTGGTGGTCGTGAAACCA+GGG | 0.626408 | tig0030941:-8806 | Msa1445080:CDS |
| ATCATAAACAGTGTCATCTG+TGG | 0.626836 | tig0030941:+8953 | None:intergenic |
| GAGGTTTGAACAATGAAACA+AGG | 0.626928 | tig0030941:+8493 | None:intergenic |
| ATTCGTGGTTATGCACACTT+GGG | 0.626992 | tig0030941:-7049 | Msa1445080:CDS |
| AAGTTTGTCTGAAAAGAATG+TGG | 0.627730 | tig0030941:-5813 | Msa1445080:three_prime_UTR |
| GTGGATATATTAGGTGCAAG+GGG | 0.635069 | tig0030941:+7190 | None:intergenic |
| AATACCTCAAGTAAAAGGGA+AGG | 0.635615 | tig0030941:+8315 | None:intergenic |
| TTGAATGATGTCTCTAGCAG+CGG | 0.637321 | tig0030941:+5867 | None:intergenic |
| AATACCCATGGTCGTTACAA+CGG | 0.638329 | tig0030941:+6769 | None:intergenic |
| AGAAATGCAAAATGTCCTTG+AGG | 0.641202 | tig0030941:-6597 | Msa1445080:CDS |
| TATGCACCTCATAATACCCA+TGG | 0.645336 | tig0030941:+6757 | None:intergenic |
| ATATTGTACGTAGCAACAGA+AGG | 0.649612 | tig0030941:+7286 | None:intergenic |
| CATATCACCCCACATCCAAG+TGG | 0.651761 | tig0030941:+7138 | None:intergenic |
| AATTTGACATCATTAAGCTG+AGG | 0.670559 | tig0030941:+4298 | None:intergenic |
| GACGTTCTGTACTTGCAGGG+TGG | 0.688128 | tig0030941:-6682 | Msa1445080:CDS |
| ATCACATTCCATCACAACAG+AGG | 0.691952 | tig0030941:+6037 | None:intergenic |
| TACGCCGCAAAATCCAAACA+AGG | 0.695358 | tig0030941:-8601 | Msa1445080:CDS |
| GGTGGTCGTGAAACCAGGGG+AGG | 0.700076 | tig0030941:-8802 | Msa1445080:CDS |
| TCAAAAGTTGAATATAAACA+GGG | 0.701448 | tig0030941:+8355 | None:intergenic |
| TTTGGTGGTCGTGAAACCAG+GGG | 0.703902 | tig0030941:-8805 | Msa1445080:CDS |
| TAGACAGCCAAAATGCAAGG+AGG | 0.707266 | tig0030941:-9188 | None:intergenic |
| ATGAAACAAGGTCTAAGACG+TGG | 0.712810 | tig0030941:+8505 | None:intergenic |
| GAATGTGATAGTGAAAATGG+AGG | 0.713446 | tig0030941:-6023 | Msa1445080:three_prime_UTR |
| GCAACAAGGGATTCACCATG+CGG | 0.719382 | tig0030941:+9108 | None:intergenic |
| ATCGCACCAAGAAAACACTG+TGG | 0.851223 | tig0030941:-6553 | Msa1445080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATGAATAAAGTAA+AGG | - | tig0030941:6505-6524 | Msa1445080:CDS | 10.0% |
| !! | AATTCAAAAAAATTCAATAA+AGG | + | tig0030941:7773-7792 | None:intergenic | 10.0% |
| !!! | AATATTGTTATATCTGTTTT+TGG | - | tig0030941:6158-6177 | Msa1445080:three_prime_UTR | 15.0% |
| !! | TAATTATAAGTGGATATATT+AGG | + | tig0030941:6248-6267 | None:intergenic | 15.0% |
| !! | TCCACTTATAATTATTTAAT+TGG | - | tig0030941:6254-6273 | Msa1445080:three_prime_UTR | 15.0% |
| !! | ACCAATTAAATAATTATAAG+TGG | + | tig0030941:6258-6277 | None:intergenic | 15.0% |
| !! | ACTTATAATTATTTAATTGG+TGG | - | tig0030941:6257-6276 | Msa1445080:three_prime_UTR | 15.0% |
| !! | TCAAAAGTTGAATATAAACA+GGG | + | tig0030941:5074-5093 | None:intergenic | 20.0% |
| !! | TTCAAAAGTTGAATATAAAC+AGG | + | tig0030941:5075-5094 | None:intergenic | 20.0% |
| !! | TAATAATACCTCAAGTAAAA+GGG | + | tig0030941:5118-5137 | None:intergenic | 20.0% |
| !! | ATAATAATACCTCAAGTAAA+AGG | + | tig0030941:5119-5138 | None:intergenic | 20.0% |
| !! | TGTATTGCAATGTATAATAA+TGG | + | tig0030941:5200-5219 | None:intergenic | 20.0% |
| !! | TATTATACATTGCAATACAT+AGG | - | tig0030941:5201-5220 | Msa1445080:intron | 20.0% |
| !! | CTAAAATAAGTTAATCAAAC+AGG | + | tig0030941:5227-5246 | None:intergenic | 20.0% |
| !!! | TTAACTTATTTTAGACTGTT+TGG | - | tig0030941:5233-5252 | Msa1445080:intron | 20.0% |
| !!! | ATTTTGTTATTGAAACCATA+AGG | - | tig0030941:5361-5380 | Msa1445080:intron | 20.0% |
| !!! | TTTTGTTATTGAAACCATAA+GGG | - | tig0030941:5362-5381 | Msa1445080:intron | 20.0% |
| !! | AATAAGCCATTTATTCAAAT+TGG | - | tig0030941:5420-5439 | Msa1445080:intron | 20.0% |
| !! | ATAAGCCATTTATTCAAATT+GGG | - | tig0030941:5421-5440 | Msa1445080:intron | 20.0% |
| !! | TAAAACCCAATTTGAATAAA+TGG | + | tig0030941:5429-5448 | None:intergenic | 20.0% |
| !!! | AAATTGGGTTTTAATACTAA+GGG | - | tig0030941:5436-5455 | Msa1445080:intron | 20.0% |
| !!! | CAATTCAACTTTATTTTATC+AGG | - | tig0030941:5624-5643 | Msa1445080:intron | 20.0% |
| !! | TTTATGTAAGTGTATACATA+AGG | - | tig0030941:5661-5680 | Msa1445080:intron | 20.0% |
| !! | TTATGTAAGTGTATACATAA+GGG | - | tig0030941:5662-5681 | Msa1445080:intron | 20.0% |
| !!! | AATATATTTGATGATTGGAT+TGG | - | tig0030941:7129-7148 | Msa1445080:CDS | 20.0% |
| !! | TGTATGAAAACATTATATCA+AGG | + | tig0030941:7914-7933 | None:intergenic | 20.0% |
| !! | TATATCAGAAACATTATCAA+AGG | + | tig0030941:7979-7998 | None:intergenic | 20.0% |
| !! | CTGAATTCAGATTAATATAA+AGG | - | tig0030941:8018-8037 | Msa1445080:intron | 20.0% |
| !! | TCCAAAATATCATTCTTAAT+AGG | + | tig0030941:8411-8430 | None:intergenic | 20.0% |
| !! | ACTTGTTTAACAAACAAATT+TGG | + | tig0030941:8460-8479 | None:intergenic | 20.0% |
| !!! | AAATTGGTAATGCATTTTGT+TGG | - | tig0030941:4502-4521 | Msa1445080:three_prime_UTR | 25.0% |
| ! | CAAAAATGTTTCATTGTTGA+TGG | + | tig0030941:4712-4731 | None:intergenic | 25.0% |
| !! | CATCAACAATGAAACATTTT+TGG | - | tig0030941:4710-4729 | Msa1445080:three_prime_UTR | 25.0% |
| !! | TGTTAGGGTTTCATATATTT+TGG | - | tig0030941:5017-5036 | Msa1445080:intron | 25.0% |
| ! | CAGAATTCTGAATATTTGAT+TGG | - | tig0030941:5042-5061 | Msa1445080:intron | 25.0% |
| !!! | TTATTTTAGACTGTTTGGAT+TGG | - | tig0030941:5238-5257 | Msa1445080:intron | 25.0% |
| !!! | TGTTTTCAGCTTATTTTCAT+TGG | - | tig0030941:5279-5298 | Msa1445080:intron | 25.0% |
| !!! | ACTGTTTTAATAAGCTAACT+TGG | + | tig0030941:5309-5328 | None:intergenic | 25.0% |
| !!! | CAAATTGGGTTTTAATACTA+AGG | - | tig0030941:5435-5454 | Msa1445080:intron | 25.0% |
| ! | GAATTTAAACAAATCGCTAT+CGG | + | tig0030941:5758-5777 | None:intergenic | 25.0% |
| !! | ATAGCGATTTGTTTAAATTC+TGG | - | tig0030941:5758-5777 | Msa1445080:three_prime_UTR | 25.0% |
| ! | TGTTAACAAAATCAACTTTC+AGG | - | tig0030941:5851-5870 | Msa1445080:three_prime_UTR | 25.0% |
| !!! | GTTTTTCAAGTGTTAAATTC+AGG | - | tig0030941:6317-6336 | Msa1445080:three_prime_UTR | 25.0% |
| !! | AACAGGTAAGTTTTCATATT+AGG | + | tig0030941:6353-6372 | None:intergenic | 25.0% |
| ! | AATGGATAATGCAATAAATG+AGG | - | tig0030941:6619-6638 | Msa1445080:CDS | 25.0% |
| !!! | GCATAATTACAGCTTATTTT+CGG | - | tig0030941:6687-6706 | Msa1445080:CDS | 25.0% |
| !!! | ATCCTTGGTTTTGAAAATAT+TGG | - | tig0030941:6931-6950 | Msa1445080:CDS | 25.0% |
| !!! | TCCTTGGTTTTGAAAATATT+GGG | - | tig0030941:6932-6951 | Msa1445080:CDS | 25.0% |
| ! | CTCAGCAATATAAATTATGA+TGG | + | tig0030941:7001-7020 | None:intergenic | 25.0% |
| ! | CATCATAATTTATATTGCTG+AGG | - | tig0030941:6999-7018 | Msa1445080:CDS | 25.0% |
| ! | ACAGAACATGTTTATAGATA+CGG | + | tig0030941:7044-7063 | None:intergenic | 25.0% |
| !! | CGTTGAATATATTTGATGAT+TGG | - | tig0030941:7124-7143 | Msa1445080:CDS | 25.0% |
| !! | TAGATATTTTTCTTGCCAAA+TGG | - | tig0030941:7191-7210 | Msa1445080:CDS | 25.0% |
| ! | TACCATCTCAAATAATATGT+AGG | - | tig0030941:7231-7250 | Msa1445080:CDS | 25.0% |
| ! | TACCTACATATTATTTGAGA+TGG | + | tig0030941:7236-7255 | None:intergenic | 25.0% |
| !!! | TAATAAAAGCATTCCTTGTA+AGG | - | tig0030941:7275-7294 | Msa1445080:CDS | 25.0% |
| !!! | AATAAAAGCATTCCTTGTAA+GGG | - | tig0030941:7276-7295 | Msa1445080:CDS | 25.0% |
| !!! | ACATCATTCAATTTTGATTG+AGG | - | tig0030941:7571-7590 | Msa1445080:intron | 25.0% |
| ! | TGAAAATTGGAAAATGAGAT+TGG | - | tig0030941:7665-7684 | Msa1445080:intron | 25.0% |
| ! | ACACAAACAAACATTTGTAT+GGG | + | tig0030941:8078-8097 | None:intergenic | 25.0% |
| !! | GTTTAATTTAACGAAAGATG+AGG | + | tig0030941:8217-8236 | None:intergenic | 25.0% |
| !!! | TTGCAATTTTTTTATACCGT+CGG | - | tig0030941:8315-8334 | Msa1445080:intron | 25.0% |
| !! | GCCTATTAAGAATGATATTT+TGG | - | tig0030941:8407-8426 | Msa1445080:CDS | 25.0% |
| !! | ATTTGTTTGTTAAACAAGTC+AGG | - | tig0030941:8461-8480 | Msa1445080:CDS | 25.0% |
| ! | GATGAACAAGAAACTTAATA+TGG | + | tig0030941:8582-8601 | None:intergenic | 25.0% |
| ! | AATGACAATGATTTATCAAC+AGG | - | tig0030941:8797-8816 | Msa1445080:CDS | 25.0% |
| ! | AATGATTTATCAACAGGATT+AGG | - | tig0030941:8803-8822 | Msa1445080:CDS | 25.0% |
| ! | GAAGAAGAAAAAATGTAGTA+TGG | + | tig0030941:8948-8967 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCTTCAAGTATC+AGG | - | tig0030941:8955-8974 | Msa1445080:CDS | 25.0% |
| ! | CAAAGATAATACTCTTCTTT+AGG | - | tig0030941:8978-8997 | Msa1445080:CDS | 25.0% |
| ! | ACTTAATTTACATACAGTAC+TGG | - | tig0030941:9101-9120 | Msa1445080:CDS | 25.0% |
| !!! | TGCTGTTTTTATTATTTGTC+TGG | + | tig0030941:9164-9183 | None:intergenic | 25.0% |
| !! | TTGCGATCATTTTTGTCAAA+CGG | - | tig0030941:4262-4281 | Msa1445080:three_prime_UTR | 30.0% |
| TGTTTATGATGCTGTCAAAT+TGG | - | tig0030941:4486-4505 | Msa1445080:three_prime_UTR | 30.0% | |
| GAATATCGTTTGATGAATGT+GGG | + | tig0030941:4796-4815 | None:intergenic | 30.0% | |
| AAGGTTTGAGAAATGAAACT+AGG | + | tig0030941:4858-4877 | None:intergenic | 30.0% | |
| TGTAGCTTCTGATTATGTTA+GGG | - | tig0030941:5002-5021 | Msa1445080:intron | 30.0% | |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | tig0030941:5507-5526 | Msa1445080:intron | 30.0% |
| !! | GCTATTTTCACAAGTTATCT+TGG | + | tig0030941:5586-5605 | None:intergenic | 30.0% |
| ! | TCAACTTTCAGGTGATTAAT+TGG | - | tig0030941:5862-5881 | Msa1445080:three_prime_UTR | 30.0% |
| ATTTAAGGAGGCAGAATTTA+AGG | - | tig0030941:6004-6023 | Msa1445080:three_prime_UTR | 30.0% | |
| TTTAAGGAGGCAGAATTTAA+GGG | - | tig0030941:6005-6024 | Msa1445080:three_prime_UTR | 30.0% | |
| ! | TTTGTTTCTCGACATGAAAA+AGG | - | tig0030941:6103-6122 | Msa1445080:three_prime_UTR | 30.0% |
| ! | TTTTCATATTAGGCTCAACA+GGG | + | tig0030941:6343-6362 | None:intergenic | 30.0% |
| AAAGATATATTCGCTGGTAA+AGG | - | tig0030941:6418-6437 | Msa1445080:three_prime_UTR | 30.0% | |
| CATATCATAACCCTGATAAT+TGG | + | tig0030941:6461-6480 | None:intergenic | 30.0% | |
| ! | TGCATCAGAACTTTTACAAT+AGG | + | tig0030941:6486-6505 | None:intergenic | 30.0% |
| !! | ATGGCTTGTATTCTTTTTCA+GGG | + | tig0030941:6547-6566 | None:intergenic | 30.0% |
| ATCAACAACACATTTAACCA+TGG | + | tig0030941:6566-6585 | None:intergenic | 30.0% | |
| ! | TCCCAATATTTTCAAAACCA+AGG | + | tig0030941:6936-6955 | None:intergenic | 30.0% |
| ! | TATGATGGAAATGCATCAAT+GGG | + | tig0030941:6986-7005 | None:intergenic | 30.0% |
| ! | TTATGATGGAAATGCATCAA+TGG | + | tig0030941:6987-7006 | None:intergenic | 30.0% |
| CTAAAACTGTAGACAAATTC+AGG | + | tig0030941:7086-7105 | None:intergenic | 30.0% | |
| ! | CTGAATTTGTCTACAGTTTT+AGG | - | tig0030941:7084-7103 | Msa1445080:CDS | 30.0% |
| !!! | GTCTACAGTTTTAGGAAAAA+TGG | - | tig0030941:7092-7111 | Msa1445080:CDS | 30.0% |
| ! | ATTTGATGATTGGATTGGAT+TGG | - | tig0030941:7134-7153 | Msa1445080:CDS | 30.0% |
| ATGTTCTCATTCAATCTTGA+TGG | + | tig0030941:7367-7386 | None:intergenic | 30.0% | |
| ! | ATGGAATGTGATAGTGAAAA+TGG | - | tig0030941:7400-7419 | Msa1445080:CDS | 30.0% |
| !!! | TTCAATTTTGATTGAGGTGA+TGG | - | tig0030941:7577-7596 | Msa1445080:intron | 30.0% |
| AAGTTTGTCTGAAAAGAATG+TGG | - | tig0030941:7613-7632 | Msa1445080:intron | 30.0% | |
| AAATTGGAAAATGAGATTGG+AGG | - | tig0030941:7668-7687 | Msa1445080:intron | 30.0% | |
| !!! | TGAGATTGTTTTTAGTGTCA+AGG | - | tig0030941:7735-7754 | Msa1445080:intron | 30.0% |
| ! | ATTCAATAAAGGCATACCTA+CGG | + | tig0030941:7762-7781 | None:intergenic | 30.0% |
| ! | CTTTTGTTGACAAATCAGTT+TGG | - | tig0030941:7941-7960 | Msa1445080:intron | 30.0% |
| ! | GTTTCTGATATAATTTGTCC+TGG | - | tig0030941:7987-8006 | Msa1445080:intron | 30.0% |
| CACACAAACAAACATTTGTA+TGG | + | tig0030941:8079-8098 | None:intergenic | 30.0% | |
| ! | TTGTTTGTGTGTGTGTATTT+TGG | - | tig0030941:8088-8107 | Msa1445080:intron | 30.0% |
| !!! | GTCTATGACGTTTTTGTTTT+GGG | + | tig0030941:8179-8198 | None:intergenic | 30.0% |
| TAAACAAGTCAGGATTAATG+TGG | - | tig0030941:8471-8490 | Msa1445080:CDS | 30.0% | |
| GGGGACATTGAAAAATTTAT+GGG | + | tig0030941:8502-8521 | None:intergenic | 30.0% | |
| AGGGGACATTGAAAAATTTA+TGG | + | tig0030941:8503-8522 | None:intergenic | 30.0% | |
| TAAAGGAGAGAATAAGATAG+GGG | + | tig0030941:8521-8540 | None:intergenic | 30.0% | |
| GTAAAGGAGAGAATAAGATA+GGG | + | tig0030941:8522-8541 | None:intergenic | 30.0% | |
| AGTAAAGGAGAGAATAAGAT+AGG | + | tig0030941:8523-8542 | None:intergenic | 30.0% | |
| !!! | ATCTTTTTTGAAGTGTAACC+TGG | - | tig0030941:8599-8618 | Msa1445080:CDS | 30.0% |
| CAAAAAAATGAATCCTTCTC+CGG | - | tig0030941:8765-8784 | Msa1445080:CDS | 30.0% | |
| ! | CTCTTCTTTAGGAATGTTTA+TGG | - | tig0030941:8989-9008 | Msa1445080:CDS | 30.0% |
| AATTTGACATCATTAAGCTG+AGG | + | tig0030941:9131-9150 | None:intergenic | 30.0% | |
| !! | TGCGATCATTTTTGTCAAAC+GGG | - | tig0030941:4263-4282 | Msa1445080:three_prime_UTR | 35.0% |
| ! | TTGCAAGATGTCTGAAATTG+TGG | + | tig0030941:4413-4432 | None:intergenic | 35.0% |
| ACAATTTCAGACATCTTGCA+AGG | - | tig0030941:4412-4431 | Msa1445080:three_prime_UTR | 35.0% | |
| ATCTTGCAAGGAAAAGGTAA+AGG | - | tig0030941:4424-4443 | Msa1445080:three_prime_UTR | 35.0% | |
| ATCATAAACAGTGTCATCTG+TGG | + | tig0030941:4476-4495 | None:intergenic | 35.0% | |
| CAGATGACACAAAACAATGT+TGG | - | tig0030941:4595-4614 | Msa1445080:three_prime_UTR | 35.0% | |
| ACAAAACAATGTTGGAGCTT+TGG | - | tig0030941:4603-4622 | Msa1445080:three_prime_UTR | 35.0% | |
| !! | TGTTTCATTGTTGATGGTGA+AGG | + | tig0030941:4706-4725 | None:intergenic | 35.0% |
| GGTATGCAATTCGTTGAATT+TGG | + | tig0030941:4764-4783 | None:intergenic | 35.0% | |
| CGAATATCGTTTGATGAATG+TGG | + | tig0030941:4797-4816 | None:intergenic | 35.0% | |
| !! | AAGACCTTGTTTGGATTTTG+CGG | + | tig0030941:4832-4851 | None:intergenic | 35.0% |
| ! | GGATTTGAAATGGATGTTGA+AGG | + | tig0030941:4877-4896 | None:intergenic | 35.0% |
| GAGGTTTGAACAATGAAACA+AGG | + | tig0030941:4936-4955 | None:intergenic | 35.0% | |
| !! | ACTTTATCCTCTTGATTTGG+AGG | + | tig0030941:4955-4974 | None:intergenic | 35.0% |
| ! | AGAGGATAAAGTCGCAATTT+TGG | - | tig0030941:4963-4982 | Msa1445080:intron | 35.0% |
| GTGTAGCTTCTGATTATGTT+AGG | - | tig0030941:5001-5020 | Msa1445080:intron | 35.0% | |
| ! | AAAACCTTCCCTTTTACTTG+AGG | - | tig0030941:5107-5126 | Msa1445080:intron | 35.0% |
| AATACCTCAAGTAAAAGGGA+AGG | + | tig0030941:5114-5133 | None:intergenic | 35.0% | |
| ATAAGGGCTGAACATGATAA+GGG | - | tig0030941:5378-5397 | Msa1445080:intron | 35.0% | |
| TACTAAGGGCTTGTATGTAT+TGG | - | tig0030941:5450-5469 | Msa1445080:intron | 35.0% | |
| !! | GCTTGTATGTATTGGCTTAT+TGG | - | tig0030941:5458-5477 | Msa1445080:intron | 35.0% |
| GCTTATTTGACCTTATCTAC+TGG | - | tig0030941:5480-5499 | Msa1445080:intron | 35.0% | |
| TTCAGGTGATTAATTGGAGA+AGG | - | tig0030941:5868-5887 | Msa1445080:three_prime_UTR | 35.0% | |
| ! | TATCTTTTTCTGATGCTTGC+AGG | - | tig0030941:5901-5920 | Msa1445080:three_prime_UTR | 35.0% |
| CATGCACATGAGTATTCAAA+GGG | - | tig0030941:5933-5952 | Msa1445080:three_prime_UTR | 35.0% | |
| !! | TCTTGCTGTTGAGCTATTTA+AGG | - | tig0030941:5989-6008 | Msa1445080:three_prime_UTR | 35.0% |
| AGCACTTACAATGCACTAAT+GGG | - | tig0030941:6041-6060 | Msa1445080:three_prime_UTR | 35.0% | |
| ATGGGTGCTTATATGTTCAA+TGG | - | tig0030941:6059-6078 | Msa1445080:three_prime_UTR | 35.0% | |
| ATATTGTACGTAGCAACAGA+AGG | + | tig0030941:6143-6162 | None:intergenic | 35.0% | |
| AGTGGATATATTAGGTGCAA+GGG | + | tig0030941:6240-6259 | None:intergenic | 35.0% | |
| AAGTGGATATATTAGGTGCA+AGG | + | tig0030941:6241-6260 | None:intergenic | 35.0% | |
| ATATATCTCCACTTGGATGT+GGG | - | tig0030941:6280-6299 | Msa1445080:three_prime_UTR | 35.0% | |
| ! | GTTTTCATATTAGGCTCAAC+AGG | + | tig0030941:6344-6363 | None:intergenic | 35.0% |
| ACTTACCTGTTAATGATTCG+TGG | - | tig0030941:6362-6381 | Msa1445080:three_prime_UTR | 35.0% | |
| CATAACCACGAATCATTAAC+AGG | + | tig0030941:6370-6389 | None:intergenic | 35.0% | |
| GATGGAAAAGATATATTCGC+TGG | - | tig0030941:6412-6431 | Msa1445080:three_prime_UTR | 35.0% | |
| TAAACGACATGCCAATTATC+AGG | - | tig0030941:6447-6466 | Msa1445080:CDS | 35.0% | |
| AAACGACATGCCAATTATCA+GGG | - | tig0030941:6448-6467 | Msa1445080:CDS | 35.0% | |
| !! | CATGGCTTGTATTCTTTTTC+AGG | + | tig0030941:6548-6567 | None:intergenic | 35.0% |
| CTGAAAAAGAATACAAGCCA+TGG | - | tig0030941:6546-6565 | Msa1445080:CDS | 35.0% | |
| ! | AACGTCTGGTGAATTTTTCA+AGG | + | tig0030941:6730-6749 | None:intergenic | 35.0% |
| CTCCTTATATCATTCTAAGC+TGG | - | tig0030941:6778-6797 | Msa1445080:CDS | 35.0% | |
| GACCAGCTTAGAATGATATA+AGG | + | tig0030941:6783-6802 | None:intergenic | 35.0% | |
| ! | GGACATTTTGCATTTCTCTA+AGG | + | tig0030941:6826-6845 | None:intergenic | 35.0% |
| AGAAATGCAAAATGTCCTTG+AGG | - | tig0030941:6829-6848 | Msa1445080:CDS | 35.0% | |
| ! | CATTATCCACAGTGTTTTCT+TGG | + | tig0030941:6882-6901 | None:intergenic | 35.0% |
| GGATAATGTACAAAGCTTAC+TGG | - | tig0030941:6894-6913 | Msa1445080:CDS | 35.0% | |
| ! | TTGGATTGGATTGCATTCAA+AGG | - | tig0030941:7148-7167 | Msa1445080:CDS | 35.0% |
| ! | CTTGATGGTATTTGCCTATT+TGG | + | tig0030941:7352-7371 | None:intergenic | 35.0% |
| ! | GAATGTGATAGTGAAAATGG+AGG | - | tig0030941:7403-7422 | Msa1445080:CDS | 35.0% |
| AAGAATGTGGAAAAGACAAC+TGG | - | tig0030941:7626-7645 | Msa1445080:intron | 35.0% | |
| !!! | TACGGGTTGCTTTTGAAAAT+TGG | - | tig0030941:7652-7671 | Msa1445080:intron | 35.0% |
| TGCTCTATCAGAACAATGTT+TGG | - | tig0030941:8145-8164 | Msa1445080:intron | 35.0% | |
| !! | GGTCTATGACGTTTTTGTTT+TGG | + | tig0030941:8180-8199 | None:intergenic | 35.0% |
| AAAGATGAGGATCTCTATCT+GGG | + | tig0030941:8204-8223 | None:intergenic | 35.0% | |
| ATATAGCATATGAGACCAAG+GGG | + | tig0030941:8248-8267 | None:intergenic | 35.0% | |
| GATATAGCATATGAGACCAA+GGG | + | tig0030941:8249-8268 | None:intergenic | 35.0% | |
| AGATATAGCATATGAGACCA+AGG | + | tig0030941:8250-8269 | None:intergenic | 35.0% | |
| ATTTGCAGAGTTGAAGCATA+TGG | + | tig0030941:8274-8293 | None:intergenic | 35.0% | |
| ATCTAATTACTATGCACCGA+CGG | + | tig0030941:8334-8353 | None:intergenic | 35.0% | |
| TACGTAAACACACTAAGCTT+GGG | + | tig0030941:8548-8567 | None:intergenic | 35.0% | |
| TTACGTAAACACACTAAGCT+TGG | + | tig0030941:8549-8568 | None:intergenic | 35.0% | |
| TTCAAGTATCTATCTCCTGA+TGG | + | tig0030941:8636-8655 | None:intergenic | 35.0% | |
| GAGATAGATACTTGAAACCA+TGG | - | tig0030941:8640-8659 | Msa1445080:CDS | 35.0% | |
| !! | ACCTTTCCTTTACTGACTTT+GGG | + | tig0030941:8678-8697 | None:intergenic | 35.0% |
| ATCCTATCATAAACGATCAC+CGG | + | tig0030941:8713-8732 | None:intergenic | 35.0% | |
| !!! | CATTGTCATTTTTCTAACGC+CGG | + | tig0030941:8787-8806 | None:intergenic | 35.0% |
| !! | CCTCTTTGAAAGGCAAATTT+TGG | + | tig0030941:8869-8888 | None:intergenic | 35.0% |
| CCAAAATTTGCCTTTCAAAG+AGG | - | tig0030941:8866-8885 | Msa1445080:intron | 35.0% | |
| AAATTTGCCTTTCAAAGAGG+AGG | - | tig0030941:8869-8888 | Msa1445080:intron | 35.0% | |
| ! | TTTAGCCCTTCAGTTTTTCA+TGG | - | tig0030941:9060-9079 | Msa1445080:CDS | 35.0% |
| ! | TTAGCCCTTCAGTTTTTCAT+GGG | - | tig0030941:9061-9080 | Msa1445080:CDS | 35.0% |
| AGAACCCATGAAAAACTGAA+GGG | + | tig0030941:9068-9087 | None:intergenic | 35.0% | |
| TAGAACCCATGAAAAACTGA+AGG | + | tig0030941:9069-9088 | None:intergenic | 35.0% | |
| TCAGACATCTTGCAAGGAAA+AGG | - | tig0030941:4418-4437 | Msa1445080:three_prime_UTR | 40.0% | |
| ! | AAACAATGTTGGAGCTTTGG+TGG | - | tig0030941:4606-4625 | Msa1445080:three_prime_UTR | 40.0% |
| GCTGGAATTATTGCAGAAAG+AGG | - | tig0030941:4658-4677 | Msa1445080:three_prime_UTR | 40.0% | |
| AGGATAACTGCGTGAACATT+TGG | + | tig0030941:4686-4705 | None:intergenic | 40.0% | |
| GATGAATGTGGGATTCGAAA+GGG | + | tig0030941:4785-4804 | None:intergenic | 40.0% | |
| TGATGAATGTGGGATTCGAA+AGG | + | tig0030941:4786-4805 | None:intergenic | 40.0% | |
| ! | ACTAGGTCTAAGACCTTGTT+TGG | + | tig0030941:4841-4860 | None:intergenic | 40.0% |
| ! | GGTGGATTCTGGATTTGAAA+TGG | + | tig0030941:4887-4906 | None:intergenic | 40.0% |
| !! | GACGTGGTTTGGTATTTGTT+CGG | + | tig0030941:4908-4927 | None:intergenic | 40.0% |
| ! | ATGAAACAAGGTCTAAGACG+TGG | + | tig0030941:4924-4943 | None:intergenic | 40.0% |
| GTTCAAACCTCCAAATCAAG+AGG | - | tig0030941:4945-4964 | Msa1445080:intron | 40.0% | |
| GCGACTTTATCCTCTTGATT+TGG | + | tig0030941:4958-4977 | None:intergenic | 40.0% | |
| CTTATCATGTTCAGCCCTTA+TGG | + | tig0030941:5379-5398 | None:intergenic | 40.0% | |
| CATAAGGGCTGAACATGATA+AGG | - | tig0030941:5377-5396 | Msa1445080:intron | 40.0% | |
| ACTTATGCTGCCAGTAGATA+AGG | + | tig0030941:5493-5512 | None:intergenic | 40.0% | |
| TATCCAAACATGCCCTGAAT+AGG | - | tig0030941:5730-5749 | Msa1445080:three_prime_UTR | 40.0% | |
| TGAATACTCATGTGCATGCA+TGG | + | tig0030941:5931-5950 | None:intergenic | 40.0% | |
| GCATGCACATGAGTATTCAA+AGG | - | tig0030941:5932-5951 | Msa1445080:three_prime_UTR | 40.0% | |
| TGCTGTTGAGCTATTTAAGG+AGG | - | tig0030941:5992-6011 | Msa1445080:three_prime_UTR | 40.0% | |
| CATTAGTGCATTGTAAGTGC+TGG | + | tig0030941:6042-6061 | None:intergenic | 40.0% | |
| CAGCACTTACAATGCACTAA+TGG | - | tig0030941:6040-6059 | Msa1445080:three_prime_UTR | 40.0% | |
| TCACATGGAAGCAACATTCA+AGG | - | tig0030941:6199-6218 | Msa1445080:three_prime_UTR | 40.0% | |
| GTGGATATATTAGGTGCAAG+GGG | + | tig0030941:6239-6258 | None:intergenic | 40.0% | |
| ! | TTGGTGGATATATCTCCACT+TGG | - | tig0030941:6273-6292 | Msa1445080:three_prime_UTR | 40.0% |
| GATATATCTCCACTTGGATG+TGG | - | tig0030941:6279-6298 | Msa1445080:three_prime_UTR | 40.0% | |
| TATATCTCCACTTGGATGTG+GGG | - | tig0030941:6281-6300 | Msa1445080:three_prime_UTR | 40.0% | |
| ATTCGTGGTTATGCACACTT+GGG | - | tig0030941:6377-6396 | Msa1445080:three_prime_UTR | 40.0% | |
| TTATGCACACTTGGGTAATC+TGG | - | tig0030941:6385-6404 | Msa1445080:three_prime_UTR | 40.0% | |
| ! | GTTGATTAAGCTTTATGCCG+AGG | - | tig0030941:6580-6599 | Msa1445080:CDS | 40.0% |
| TTATGCCGAGGAAAACTGTT+TGG | - | tig0030941:6592-6611 | Msa1445080:CDS | 40.0% | |
| ! | TTCCTCCAAACAGTTTTCCT+CGG | + | tig0030941:6600-6619 | None:intergenic | 40.0% |
| GGAAAACTGTTTGGAGGAAA+TGG | - | tig0030941:6601-6620 | Msa1445080:CDS | 40.0% | |
| AATACCCATGGTCGTTACAA+CGG | + | tig0030941:6660-6679 | None:intergenic | 40.0% | |
| TAACGACCATGGGTATTATG+AGG | - | tig0030941:6663-6682 | Msa1445080:CDS | 40.0% | |
| TATGCACCTCATAATACCCA+TGG | + | tig0030941:6672-6691 | None:intergenic | 40.0% | |
| CATTCTAAGCTGGTCATGTA+TGG | - | tig0030941:6788-6807 | Msa1445080:CDS | 40.0% | |
| GCAAAATGTCCTTGAGGAAA+TGG | - | tig0030941:6835-6854 | Msa1445080:CDS | 40.0% | |
| ATGTCCTTGAGGAAATGGAT+AGG | - | tig0030941:6840-6859 | Msa1445080:CDS | 40.0% | |
| TGTCCTTGAGGAAATGGATA+GGG | - | tig0030941:6841-6860 | Msa1445080:CDS | 40.0% | |
| TACAAAGCTTACTGGAGTTG+TGG | - | tig0030941:6902-6921 | Msa1445080:CDS | 40.0% | |
| TTGGGACAAATGTTCAAGCA+TGG | - | tig0030941:6950-6969 | Msa1445080:CDS | 40.0% | |
| ! | CCAAATGGACTTCTTCAACT+GGG | - | tig0030941:7206-7225 | Msa1445080:CDS | 40.0% |
| ! | CAAATGGACTTCTTCAACTG+GGG | - | tig0030941:7207-7226 | Msa1445080:CDS | 40.0% |
| ACTGCAAATTCACCCTTACA+AGG | + | tig0030941:7291-7310 | None:intergenic | 40.0% | |
| ! | AGGGTGAATTTGCAGTTTTG+AGG | - | tig0030941:7295-7314 | Msa1445080:CDS | 40.0% |
| ! | GTATTTGCCTATTTGGTGAG+TGG | + | tig0030941:7345-7364 | None:intergenic | 40.0% |
| ATCACATTCCATCACAACAG+AGG | + | tig0030941:7392-7411 | None:intergenic | 40.0% | |
| !!! | CTAGCAAATGGTTTTGGATC+AGG | + | tig0030941:7442-7461 | None:intergenic | 40.0% |
| TCCATCTTCTTAGAGTGTGA+TGG | - | tig0030941:7514-7533 | Msa1445080:CDS | 40.0% | |
| TTGAATGATGTCTCTAGCAG+CGG | + | tig0030941:7562-7581 | None:intergenic | 40.0% | |
| !! | TTTTTAGTGTCAAGGTCCGT+AGG | - | tig0030941:7743-7762 | Msa1445080:intron | 40.0% |
| CTGAATTCAGCACAAAAACC+AGG | + | tig0030941:8008-8027 | None:intergenic | 40.0% | |
| GAAAGATGAGGATCTCTATC+TGG | + | tig0030941:8205-8224 | None:intergenic | 40.0% | |
| ATTAAACATGTTCTGCCCCT+TGG | - | tig0030941:8230-8249 | Msa1445080:intron | 40.0% | |
| TTCAACTCTGCAAATTGCAG+AGG | - | tig0030941:8279-8298 | Msa1445080:intron | 40.0% | |
| AAGTATCTATCTCCTGATGG+TGG | + | tig0030941:8633-8652 | None:intergenic | 40.0% | |
| !! | TTGGGTAGTGGAATTATCCA+TGG | + | tig0030941:8660-8679 | None:intergenic | 40.0% |
| ACCCAAAGTCAGTAAAGGAA+AGG | - | tig0030941:8674-8693 | Msa1445080:CDS | 40.0% | |
| !! | CACCTTTCCTTTACTGACTT+TGG | + | tig0030941:8679-8698 | None:intergenic | 40.0% |
| TGCAACTGAGAAACACTTGA+AGG | + | tig0030941:9030-9049 | None:intergenic | 40.0% | |
| TCAAACCGTGAAAAGGCAAC+TGG | + | tig0030941:4346-4365 | None:intergenic | 45.0% | |
| AGCAGACTCAAACCGTGAAA+AGG | + | tig0030941:4353-4372 | None:intergenic | 45.0% | |
| !! | GGAAAAGGTAAAGGTGCTGA+TGG | - | tig0030941:4433-4452 | Msa1445080:three_prime_UTR | 45.0% |
| !! | GTAAAGGTGCTGATGGTTCT+TGG | - | tig0030941:4440-4459 | Msa1445080:three_prime_UTR | 45.0% |
| TACGCCGCAAAATCCAAACA+AGG | - | tig0030941:4825-4844 | Msa1445080:intron | 45.0% | |
| ! | GGTATTTGTTCGGTGGATTC+TGG | + | tig0030941:4898-4917 | None:intergenic | 45.0% |
| !! | GTGGTTTGGTATTTGTTCGG+TGG | + | tig0030941:4905-4924 | None:intergenic | 45.0% |
| ! | ACAAGGTCTAAGACGTGGTT+TGG | + | tig0030941:4919-4938 | None:intergenic | 45.0% |
| GTTCCTATTCAGGGCATGTT+TGG | + | tig0030941:5736-5755 | None:intergenic | 45.0% | |
| !! | TCGCTATCGGTTCCTATTCA+GGG | + | tig0030941:5745-5764 | None:intergenic | 45.0% |
| !! | ATCGCTATCGGTTCCTATTC+AGG | + | tig0030941:5746-5765 | None:intergenic | 45.0% |
| !! | TCAAAGGGCATTAAAGCTGC+AGG | - | tig0030941:5948-5967 | Msa1445080:three_prime_UTR | 45.0% |
| GCAACAGAAGGATAGCAAGT+TGG | + | tig0030941:6131-6150 | None:intergenic | 45.0% | |
| CTTGATGCTCACTGATCACA+TGG | - | tig0030941:6184-6203 | Msa1445080:three_prime_UTR | 45.0% | |
| GATTCGTGGTTATGCACACT+TGG | - | tig0030941:6376-6395 | Msa1445080:three_prime_UTR | 45.0% | |
| CTTGGGTAATCTGGAGAAGA+TGG | - | tig0030941:6394-6413 | Msa1445080:three_prime_UTR | 45.0% | |
| AGAACCGTTGTAACGACCAT+GGG | - | tig0030941:6653-6672 | Msa1445080:CDS | 45.0% | |
| TGACCCTATCCATTTCCTCA+AGG | + | tig0030941:6847-6866 | None:intergenic | 45.0% | |
| ATCGCACCAAGAAAACACTG+TGG | - | tig0030941:6873-6892 | Msa1445080:CDS | 45.0% | |
| ! | GCCAAATGGACTTCTTCAAC+TGG | - | tig0030941:7205-7224 | Msa1445080:CDS | 45.0% |
| CCCAGTTGAAGAAGTCCATT+TGG | + | tig0030941:7209-7228 | None:intergenic | 45.0% | |
| !! | GGTATGCATCAATTTGCTGC+TGG | - | tig0030941:7252-7271 | Msa1445080:CDS | 45.0% |
| GAACATGACCTCTGTTGTGA+TGG | - | tig0030941:7381-7400 | Msa1445080:CDS | 45.0% | |
| ! | CTGCAGCTAGCAAATGGTTT+TGG | + | tig0030941:7448-7467 | None:intergenic | 45.0% |
| CAAGAACTGCAGCTAGCAAA+TGG | + | tig0030941:7454-7473 | None:intergenic | 45.0% | |
| AGCTGCAGTTCTTGAGATGT+CGG | - | tig0030941:7460-7479 | Msa1445080:CDS | 45.0% | |
| ! | GCCATCACACTCTAAGAAGA+TGG | + | tig0030941:7518-7537 | None:intergenic | 45.0% |
| GGAAAAGACAACTGGCTGTA+CGG | - | tig0030941:7634-7653 | Msa1445080:intron | 45.0% | |
| GAAAAGACAACTGGCTGTAC+GGG | - | tig0030941:7635-7654 | Msa1445080:intron | 45.0% | |
| CACTAAGCTTGGGTCAGTAA+AGG | + | tig0030941:8538-8557 | None:intergenic | 45.0% | |
| !! | CCTTTACTGACTTTGGGTAG+TGG | + | tig0030941:8672-8691 | None:intergenic | 45.0% |
| CCACTACCCAAAGTCAGTAA+AGG | - | tig0030941:8669-8688 | Msa1445080:CDS | 45.0% | |
| !! | GAAAGGTGCCATATTCTAGC+CGG | - | tig0030941:8691-8710 | Msa1445080:CDS | 45.0% |
| ! | AACGATCACCGGCTAGAATA+TGG | + | tig0030941:8702-8721 | None:intergenic | 45.0% |
| AGCCGGTGATCGTTTATGAT+AGG | - | tig0030941:8708-8727 | Msa1445080:CDS | 45.0% | |
| ! | CATTTTTCTAACGCCGGAGA+AGG | + | tig0030941:8781-8800 | None:intergenic | 45.0% |
| AGCTTTGCCTCCTCTTTGAA+AGG | + | tig0030941:8879-8898 | None:intergenic | 45.0% | |
| TCAAAGAGGAGGCAAAGCTT+TGG | - | tig0030941:8880-8899 | Msa1445080:intron | 45.0% | |
| !! | AGGCAAAGCTTTGGACTTGA+AGG | - | tig0030941:8889-8908 | Msa1445080:intron | 45.0% |
| !!! | AATATAAAACTAAATTATTT+TGG | + | tig0030941:5344-5363 | None:intergenic | 5.0% |
| ! | TGTTTTGCAACGAGTCCGCA+TGG | - | tig0030941:4303-4322 | Msa1445080:three_prime_UTR | 50.0% |
| GCAACAAGGGATTCACCATG+CGG | + | tig0030941:4321-4340 | None:intergenic | 50.0% | |
| AAGGCAACTGGCTGCAACAA+GGG | + | tig0030941:4334-4353 | None:intergenic | 50.0% | |
| AAAGGCAACTGGCTGCAACA+AGG | + | tig0030941:4335-4354 | None:intergenic | 50.0% | |
| ! | TGCAGCCAGTTGCCTTTTCA+CGG | - | tig0030941:4338-4357 | Msa1445080:three_prime_UTR | 50.0% |
| TGCTACACCTGCTCGTATTG+AGG | - | tig0030941:4369-4388 | Msa1445080:three_prime_UTR | 50.0% | |
| ! | GTGCTGATGGTTCTTGGCTT+TGG | - | tig0030941:4446-4465 | Msa1445080:three_prime_UTR | 50.0% |
| ! | CTTTGGTGGTCGTGAAACCA+GGG | - | tig0030941:4620-4639 | Msa1445080:three_prime_UTR | 50.0% |
| ! | TTTGGTGGTCGTGAAACCAG+GGG | - | tig0030941:4621-4640 | Msa1445080:three_prime_UTR | 50.0% |
| ! | GCAATTGATTTCTCCTCCCC+TGG | + | tig0030941:4640-4659 | None:intergenic | 50.0% |
| GGGGAGGAGAAATCAATTGC+TGG | - | tig0030941:4640-4659 | Msa1445080:three_prime_UTR | 50.0% | |
| CATATCACCCCACATCCAAG+TGG | + | tig0030941:6291-6310 | None:intergenic | 50.0% | |
| CACTTGGATGTGGGGTGATA+TGG | - | tig0030941:6289-6308 | Msa1445080:three_prime_UTR | 50.0% | |
| TGCCGAGGAAAACTGTTTGG+AGG | - | tig0030941:6595-6614 | Msa1445080:CDS | 50.0% | |
| CAGAACCGTTGTAACGACCA+TGG | - | tig0030941:6652-6671 | Msa1445080:CDS | 50.0% | |
| ACCAGACGTTCTGTACTTGC+AGG | - | tig0030941:6740-6759 | Msa1445080:CDS | 50.0% | |
| CCAGACGTTCTGTACTTGCA+GGG | - | tig0030941:6741-6760 | Msa1445080:CDS | 50.0% | |
| GAGTTGTGGTCAGAGATCCT+TGG | - | tig0030941:6916-6935 | Msa1445080:CDS | 50.0% | |
| GAACGCACCACTCACCAAAT+AGG | - | tig0030941:7335-7354 | Msa1445080:CDS | 50.0% | |
| GAGATTGGAGGAGTTCATGC+AGG | - | tig0030941:7680-7699 | Msa1445080:intron | 50.0% | |
| GGAGGAGTTCATGCAGGTAA+TGG | - | tig0030941:7686-7705 | Msa1445080:intron | 50.0% | |
| GATGAGGATCTCTATCTGGG+AGG | + | tig0030941:8201-8220 | None:intergenic | 50.0% | |
| !! | CTGATGGTGGACAAGAAACC+AGG | + | tig0030941:8620-8639 | None:intergenic | 50.0% |
| CTGGTTTCTTGTCCACCATC+AGG | - | tig0030941:8618-8637 | Msa1445080:CDS | 50.0% | |
| ACTCTAGCATACTGAGCAGC+AGG | + | tig0030941:8842-8861 | None:intergenic | 50.0% | |
| CCATGCTCCTCAATACGAGC+AGG | + | tig0030941:4379-4398 | None:intergenic | 55.0% | |
| CCTGCTCGTATTGAGGAGCA+TGG | - | tig0030941:4376-4395 | Msa1445080:three_prime_UTR | 55.0% | |
| ! | GCTTTGGTGGTCGTGAAACC+AGG | - | tig0030941:4619-4638 | Msa1445080:three_prime_UTR | 55.0% |
| CCCTGCAAGTACAGAACGTC+TGG | + | tig0030941:6744-6763 | None:intergenic | 55.0% | |
| GACGTTCTGTACTTGCAGGG+TGG | - | tig0030941:6744-6763 | Msa1445080:CDS | 55.0% | |
| GGTGGTCGTGAAACCAGGGG+AGG | - | tig0030941:4624-4643 | Msa1445080:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030941 | gene | 4250 | 9198 | 4250 | ID=Msa1445080;Name=Msa1445080 |
| tig0030941 | mRNA | 4250 | 9198 | 4250 | ID=Msa1445080-mRNA-1;Parent=Msa1445080;Name=Msa1445080-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0.66|0.5|1|0.66|0.5|4|1317|640 |
| tig0030941 | exon | 4250 | 4808 | 4250 | ID=Msa1445080-mRNA-1:exon:14824;Parent=Msa1445080-mRNA-1 |
| tig0030941 | exon | 5684 | 7575 | 5684 | ID=Msa1445080-mRNA-1:exon:14823;Parent=Msa1445080-mRNA-1 |
| tig0030941 | exon | 8320 | 8850 | 8320 | ID=Msa1445080-mRNA-1:exon:14822;Parent=Msa1445080-mRNA-1 |
| tig0030941 | exon | 8941 | 9198 | 8941 | ID=Msa1445080-mRNA-1:exon:14821;Parent=Msa1445080-mRNA-1 |
| tig0030941 | CDS | 8941 | 9198 | 8941 | ID=Msa1445080-mRNA-1:cds;Parent=Msa1445080-mRNA-1 |
| tig0030941 | CDS | 8320 | 8850 | 8320 | ID=Msa1445080-mRNA-1:cds;Parent=Msa1445080-mRNA-1 |
| tig0030941 | CDS | 6442 | 7575 | 6442 | ID=Msa1445080-mRNA-1:cds;Parent=Msa1445080-mRNA-1 |
| tig0030941 | three_prime_UTR | 5684 | 6441 | 5684 | ID=Msa1445080-mRNA-1:three_prime_utr;Parent=Msa1445080-mRNA-1 |
| tig0030941 | three_prime_UTR | 4250 | 4808 | 4250 | ID=Msa1445080-mRNA-1:three_prime_utr;Parent=Msa1445080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
