AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1306390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306390 MtrunA17_Chr8g0387181 97.611 628 15 0 1 628 1 628 0.0 1280
Msa1306390 MtrunA17_Chr8g0387141 75.000 636 111 6 1 628 1 596 0.0 944
Msa1306390 MtrunA17_Chr1g0186281 68.513 632 136 11 1 622 1 579 0.0 809
Msa1306390 MtrunA17_Chr1g0186261 67.880 632 143 9 1 622 1 582 0.0 806
Msa1306390 MtrunA17_Chr1g0186191 66.839 579 134 8 45 622 68 589 0.0 738
Msa1306390 MtrunA17_Chr8g0387161 85.427 199 29 0 430 628 99 297 1.27e-119 357
Msa1306390 MtrunA17_Chr8g0387161 75.758 99 24 0 249 347 1 99 2.27e-42 154
Msa1306390 MtrunA17_Chr6g0479271 57.714 350 86 6 175 522 7 296 4.43e-111 336
Msa1306390 MtrunA17_Chr6g0479271 78.378 37 8 0 592 628 292 328 4.45e-12 67.8
Msa1306390 MtrunA17_Chr7g0248041 37.076 383 180 9 234 609 243 571 4.37e-68 233
Msa1306390 MtrunA17_Chr7g0248041 57.377 61 26 0 60 120 1 61 3.29e-12 69.3
Msa1306390 MtrunA17_Chr8g0348691 52.000 175 80 3 425 595 76 250 5.89e-53 182
Msa1306390 MtrunA17_Chr6g0453251 69.841 126 31 2 1 119 1 126 1.21e-49 169
Msa1306390 MtrunA17_Chr5g0420461 48.837 215 41 5 309 522 19 165 6.71e-42 150
Msa1306390 MtrunA17_Chr5g0420461 75.610 41 10 0 588 628 157 197 6.59e-14 70.9
Msa1306390 MtrunA17_Chr7g0241681 38.012 171 98 2 424 588 193 361 6.62e-29 118
Msa1306390 MtrunA17_Chr3g0086341 39.891 183 95 6 423 593 147 326 8.30e-26 111
Msa1306390 MtrunA17_Chr7g0241661 30.387 181 118 2 414 588 175 353 4.41e-20 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306390 AT4G11400.2 34.697 611 322 17 32 627 25 573 6.83e-98 311
Msa1306390 AT4G11400.1 34.697 611 322 17 32 627 25 573 6.83e-98 311
Msa1306390 AT2G46040.3 46.199 171 88 3 427 594 362 531 1.43e-39 153
Msa1306390 AT2G46040.3 26.603 312 198 7 35 336 47 337 4.04e-21 97.8
Msa1306390 AT2G46040.1 46.199 171 88 3 427 594 362 531 1.43e-39 153
Msa1306390 AT2G46040.1 26.603 312 198 7 35 336 47 337 4.04e-21 97.8
Msa1306390 AT2G46040.2 46.199 171 88 3 427 594 376 545 2.08e-39 153
Msa1306390 AT2G46040.2 26.603 312 198 7 35 336 61 351 4.45e-21 97.8
Msa1306390 AT5G04110.2 39.130 161 86 4 425 574 362 521 4.96e-27 116
Msa1306390 AT5G04110.1 39.130 161 86 4 425 574 361 520 5.11e-27 115
Msa1306390 AT5G04110.3 39.130 161 86 4 425 574 361 520 5.11e-27 115
Msa1306390 AT2G03470.1 34.896 192 102 6 423 599 121 304 1.60e-21 98.2
Msa1306390 AT2G03470.2 34.896 192 102 6 423 599 120 303 1.66e-21 98.2
Msa1306390 AT1G13880.1 35.359 181 103 4 423 593 126 302 2.24e-21 97.8
Msa1306390 AT1G13880.3 35.359 181 103 4 423 593 127 303 2.24e-21 97.8
Msa1306390 AT1G13880.2 35.359 181 103 4 423 593 136 312 2.43e-21 97.8
Msa1306390 AT1G26580.3 31.429 210 124 5 418 609 62 269 8.56e-21 95.9
Msa1306390 AT1G26580.2 31.429 210 124 5 418 609 128 335 1.35e-20 95.9
Msa1306390 AT1G26580.1 31.429 210 124 5 418 609 128 335 1.35e-20 95.9
Msa1306390 AT5G04110.4 37.241 145 79 4 425 558 361 504 2.38e-19 92.0

Find 158 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTCCCATTTGTTATTT+TGG 0.062612 8_4:-1354571 None:intergenic
TCGGAGCACTTTCAAGTTTA+TGG 0.095722 8_4:+1359044 Msa1306390:three_prime_UTR
CAAGAGTGATGGTTATTTAT+TGG 0.189535 8_4:+1354538 Msa1306390:CDS
TCATTGGGGATTTGATAAAA+TGG 0.191990 8_4:+1358236 Msa1306390:CDS
TATCATCACCGTCAACATTT+TGG 0.205466 8_4:-1354595 None:intergenic
CCTTTAGATTTGAGCATAAA+AGG 0.207974 8_4:-1354448 None:intergenic
TTCTTCCTTGTGAAGGAAAA+AGG 0.229657 8_4:+1354206 Msa1306390:CDS
AGCTATAGGTCTTGATTATC+AGG 0.237722 8_4:+1353739 Msa1306390:five_prime_UTR
GATGATGACGAAGTTGAATT+TGG 0.250331 8_4:+1358477 Msa1306390:CDS
TTATACTCCTTCCACCTTGA+TGG 0.254585 8_4:-1354800 None:intergenic
AATTTGATCACAAATAAATA+AGG 0.271584 8_4:-1353929 None:intergenic
CTTTGCTGCAATTCATGTTC+TGG 0.273535 8_4:+1357748 Msa1306390:CDS
GTATACACAAAATTGATAAA+AGG 0.274115 8_4:-1353794 None:intergenic
TGATGAAGAAAAGAGATTTA+AGG 0.278264 8_4:+1358287 Msa1306390:CDS
TGCCTTGTTTCGAAAGTATC+TGG 0.279788 8_4:-1358364 None:intergenic
CACCTTGATGGTTCTGGTAA+TGG 0.297194 8_4:-1354788 None:intergenic
CGCTAACTGTGCACCCTTCA+AGG 0.311246 8_4:-1358892 None:intergenic
CACTCCAAGCAATCCATATA+TGG 0.312317 8_4:-1358540 None:intergenic
GTGGTTGATGCGTTGGAATT+TGG 0.314259 8_4:+1358765 Msa1306390:three_prime_UTR
ACAAGATCTGTTTCGGTAGT+AGG 0.317915 8_4:-1358096 None:intergenic
TTTCTCTTCTCAGTTGCATC+TGG 0.327601 8_4:-1357883 None:intergenic
GTCTATTGGGTGCTCCTTGA+AGG 0.329665 8_4:+1358878 Msa1306390:three_prime_UTR
CTCTACTACAATTCTCCTTT+AGG 0.334096 8_4:-1354121 None:intergenic
CTTCTCAGTTGCATCTGGTT+TGG 0.334667 8_4:-1357878 None:intergenic
GAGAAAATCTGAGCCATCTA+TGG 0.335639 8_4:+1357936 Msa1306390:CDS
ATAATTCTCGCAAACGTAAA+CGG 0.342533 8_4:+1354696 Msa1306390:CDS
TCCTTCCACCTTGATGGTTC+TGG 0.342765 8_4:-1354794 None:intergenic
TGGAATTTGGAAAGCCACTA+TGG 0.353008 8_4:+1358778 Msa1306390:three_prime_UTR
TTTCTGAGAGTGACTCTAAA+TGG 0.355739 8_4:+1358034 Msa1306390:CDS
TTCAGTGACGACGTCTGGTT+TGG 0.357587 8_4:-1357839 None:intergenic
CGTCTAGACGCTGAATTTCA+TGG 0.359710 8_4:+1354014 Msa1306390:CDS
AGCTATCAAGCATCCATATA+TGG 0.363115 8_4:+1358527 Msa1306390:CDS
CGTAAACGGGAATCGATATC+AGG 0.372781 8_4:+1354710 Msa1306390:CDS
AATGGTTAGGCACACAAGTA+TGG 0.373689 8_4:+1358052 Msa1306390:CDS
GAAGTTGAATTTGGATCTTT+TGG 0.375334 8_4:+1358486 Msa1306390:CDS
CATTGGGGATTTGATAAAAT+GGG 0.380212 8_4:+1358237 Msa1306390:CDS
GACATGATTATGTTGTAAAA+TGG 0.380277 8_4:+1358853 Msa1306390:three_prime_UTR
ATTGCACGGTTCAGTCAATA+TGG 0.388593 8_4:+1357783 Msa1306390:CDS
GGATTCTGTGATAATTGAAA+TGG 0.394907 8_4:+1354262 Msa1306390:CDS
TATGAAGAGTTATGACCATT+TGG 0.396880 8_4:-1353770 None:intergenic
GTTGTAAAATGGCAGTCTAT+TGG 0.401172 8_4:+1358864 Msa1306390:three_prime_UTR
TGATGTTACTTGATTCTAAC+GGG 0.404597 8_4:-1354490 None:intergenic
CGAAAATCATCATCCATAGA+TGG 0.407291 8_4:-1357949 None:intergenic
CTGCAATTCATGTTCTGGTA+AGG 0.408572 8_4:+1357753 Msa1306390:CDS
TAATTCTCGCAAACGTAAAC+GGG 0.414761 8_4:+1354697 Msa1306390:CDS
GCGGTTGTATTGTTGAGTAT+CGG 0.426228 8_4:+1354042 Msa1306390:CDS
TCTCCCAACAAGATCTGTTT+CGG 0.428135 8_4:-1358103 None:intergenic
TCTGGTAATGGTGGAGCTAC+AGG 0.429826 8_4:-1354776 None:intergenic
GTACCATCAACATATACAAA+AGG 0.430239 8_4:+1353884 Msa1306390:five_prime_UTR
CTAATTACCAAAATAACAAA+TGG 0.432389 8_4:+1354564 Msa1306390:CDS
GATTTCATATTGCTGAGAAC+AGG 0.435888 8_4:+1358178 Msa1306390:CDS
TTGTTCAGTTGCTGAGGGCA+AGG 0.439451 8_4:+1354840 Msa1306390:CDS
CCGGAACTTCCGCTTGGAAA+AGG 0.440137 8_4:-1357996 None:intergenic
GAAACTACACCAGTCCATTC+CGG 0.442162 8_4:-1358015 None:intergenic
TGGGAAGATGATCCACCATT+TGG 0.442630 8_4:-1354893 None:intergenic
CATATACAAAAGGGCTAGCT+AGG 0.447091 8_4:+1353894 Msa1306390:five_prime_UTR
TCAAGGTGGAAGGAGTATAA+AGG 0.452997 8_4:+1354803 Msa1306390:CDS
TTGTAAAATGGCAGTCTATT+GGG 0.453539 8_4:+1358865 Msa1306390:three_prime_UTR
TATACACAAAATTGATAAAA+GGG 0.460354 8_4:-1353793 None:intergenic
CTACCGAAACAGATCTTGTT+GGG 0.462379 8_4:+1358100 Msa1306390:CDS
CGGTTGTATTGTTGAGTATC+GGG 0.464313 8_4:+1354043 Msa1306390:CDS
CGATATCAGGAATGGTGAAC+TGG 0.466029 8_4:+1354723 Msa1306390:CDS
GACGCTGAATTTCATGGAAA+CGG 0.467095 8_4:+1354020 Msa1306390:CDS
AGTCAGACGTTCATGGCAAA+CGG 0.467323 8_4:+1353978 Msa1306390:exon
CAGCACTAATGAAAACCAAA+AGG 0.467703 8_4:-1358961 None:intergenic
GCATCCATATATGGATTGCT+TGG 0.469079 8_4:+1358536 Msa1306390:CDS
CGGTATCGAGAAAAGGGTTG+TGG 0.472038 8_4:+1354240 Msa1306390:CDS
CAGCACAAATGCTGTCCAAA+AGG 0.476215 8_4:-1359005 None:intergenic
CGTGAAAAGCTTGTTTCTGT+AGG 0.477267 8_4:+1357970 Msa1306390:CDS
TCATCGCTGTCAACAGTCTT+CGG 0.477687 8_4:-1358459 None:intergenic
TCTCCGAGCATCACCGGCAT+TGG 0.482085 8_4:-1354155 None:intergenic
TATGATGCGGTATCGAGAAA+AGG 0.483215 8_4:+1354233 Msa1306390:CDS
GATTCTGTGATAATTGAAAT+GGG 0.484845 8_4:+1354263 Msa1306390:CDS
GTCAGACGTTCATGGCAAAC+GGG 0.485222 8_4:+1353979 Msa1306390:exon
CGGTGACAACAATGAAATGA+AGG 0.489011 8_4:-1353690 None:intergenic
GAGAGTGACTCTAAATGGTT+AGG 0.492462 8_4:+1358039 Msa1306390:CDS
CAGCGAGATTTAACAGAGAC+AGG 0.494477 8_4:-1357724 None:intergenic
AAGTGTAGCTGCAACGTTCA+AGG 0.494639 8_4:+1358138 Msa1306390:CDS
TGTTCAGTTGCTGAGGGCAA+GGG 0.496056 8_4:+1354841 Msa1306390:CDS
GGAGTCAGAAATATGTCCTC+TGG 0.498373 8_4:+1357804 Msa1306390:CDS
ACTACCGAAACAGATCTTGT+TGG 0.499677 8_4:+1358099 Msa1306390:CDS
AACAGAGAGTCAGACGTTCA+TGG 0.503202 8_4:+1353971 Msa1306390:exon
AAGAGGAGTGGTTGATGCGT+TGG 0.510564 8_4:+1358758 Msa1306390:three_prime_UTR
TCCATTCCGGAACTTCCGCT+TGG 0.513689 8_4:-1358002 None:intergenic
GTGAGGAAGTTTCACTTCGA+TGG 0.516591 8_4:+1358259 Msa1306390:CDS
TACCATCAACATATACAAAA+GGG 0.517904 8_4:+1353885 Msa1306390:five_prime_UTR
ATGCCGGTGATGCTCGGAGA+TGG 0.521994 8_4:+1354158 Msa1306390:CDS
GATTTAGAACATGTCCATAG+TGG 0.528201 8_4:-1358792 None:intergenic
TAATTACCAAAATAACAAAT+GGG 0.533109 8_4:+1354565 Msa1306390:CDS
ATGATGTTACTTGATTCTAA+CGG 0.535061 8_4:-1354491 None:intergenic
TATCAGGTAAATCTGCCAAA+TGG 0.535518 8_4:+1353755 Msa1306390:five_prime_UTR
TCTATTGGGTGCTCCTTGAA+GGG 0.537436 8_4:+1358879 Msa1306390:three_prime_UTR
TTGTTTCGAAAGTATCTGGA+TGG 0.538515 8_4:-1358360 None:intergenic
GGTGGAGCTACAGGATCAAA+CGG 0.540327 8_4:-1354767 None:intergenic
ATCTCAATTTCACTGTACCT+TGG 0.540348 8_4:-1357687 None:intergenic
CTCAGAGATTTCCACACAAG+AGG 0.541018 8_4:-1354666 None:intergenic
GCGGAAGTTCCGGAATGGAC+TGG 0.543878 8_4:+1358006 Msa1306390:CDS
AGGCCAATGCCGGTGATGCT+CGG 0.544289 8_4:+1354152 Msa1306390:CDS
TCAACTGTTCTTCCTTGTGA+AGG 0.544693 8_4:+1354199 Msa1306390:CDS
GGGATTTGATAAAATGGGTG+AGG 0.544818 8_4:+1358242 Msa1306390:CDS
TCACGGATGCCAAAACATGA+AGG 0.545005 8_4:-1354292 None:intergenic
TGCAATTCATGTTCTGGTAA+GGG 0.545401 8_4:+1357754 Msa1306390:CDS
GGACCATCTCCGAGCATCAC+CGG 0.547780 8_4:-1354161 None:intergenic
AAAATTCGGCAATGGTGTTG+AGG 0.550666 8_4:+1354631 Msa1306390:CDS
ATGATGCGGTATCGAGAAAA+GGG 0.552445 8_4:+1354234 Msa1306390:CDS
ATAAATAACCATCACTCTTG+TGG 0.553747 8_4:-1354535 None:intergenic
TCAACCACTCCTCTTCTAGC+TGG 0.556029 8_4:-1358750 None:intergenic
GAAGGAGTATAAAGGAGGCC+AGG 0.557635 8_4:+1354811 Msa1306390:CDS
AGTTCTAAGAAATAGAATGA+AGG 0.557779 8_4:+1353421 Msa1306390:five_prime_UTR
AAGAAAGAACCAGCTAGAAG+AGG 0.560607 8_4:+1358741 Msa1306390:three_prime_UTR
TTGTGTGGAAATCTCTGAGA+AGG 0.561286 8_4:+1354670 Msa1306390:CDS
CACCATTACCAGAACCATCA+AGG 0.561316 8_4:+1354786 Msa1306390:CDS
GGTATCGAGAAAAGGGTTGT+GGG 0.561504 8_4:+1354241 Msa1306390:CDS
TGTTCTGTCTGTGAGAAAGC+AGG 0.562735 8_4:+1354865 Msa1306390:CDS
AGCACTAATGAAAACCAAAA+GGG 0.565460 8_4:-1358960 None:intergenic
TCCAAGCGGAAGTTCCGGAA+TGG 0.566498 8_4:+1358001 Msa1306390:CDS
AGGCATTGTGAGGCCAATGC+CGG 0.566829 8_4:+1354142 Msa1306390:CDS
GATGCATCCTGCCATGTATG+AGG 0.570606 8_4:+1357645 Msa1306390:CDS
TACCAAAATAACAAATGGGA+GGG 0.570891 8_4:+1354569 Msa1306390:CDS
ATTCAGCGTCTAGACGATCA+AGG 0.572295 8_4:-1354007 None:intergenic
CAGGAATGGTGAACTGGACA+CGG 0.572522 8_4:+1354729 Msa1306390:CDS
CTTGATGGTTCTGGTAATGG+TGG 0.573107 8_4:-1354785 None:intergenic
GTGACGGTGTTGGTACTAGC+TGG 0.575249 8_4:-1353605 None:intergenic
TTTGTTAACCACAAGAGTGA+TGG 0.575780 8_4:+1354527 Msa1306390:CDS
TGAAATTGAGATATAGTGAA+AGG 0.576187 8_4:+1357698 Msa1306390:CDS
ACATGATCCTCATACATGGC+AGG 0.576377 8_4:-1357652 None:intergenic
CTGTAAAACTATCGTTCAGT+CGG 0.581173 8_4:+1359025 Msa1306390:three_prime_UTR
GGTAAGGGAAATAAATTGCA+CGG 0.586625 8_4:+1357769 Msa1306390:CDS
AAATGGTGGATCATCTTCCC+AGG 0.587670 8_4:+1354895 Msa1306390:CDS
ATCCAGATACTTTCGAAACA+AGG 0.591847 8_4:+1358362 Msa1306390:CDS
TTATCTAGCTGCCTCTTGTG+TGG 0.597731 8_4:+1354655 Msa1306390:CDS
ACGGGAATCGATATCAGGAA+TGG 0.603553 8_4:+1354715 Msa1306390:CDS
CTAAAGGAGAATTGTAGTAG+AGG 0.604171 8_4:+1354122 Msa1306390:CDS
AGCAACATGATCCTCATACA+TGG 0.604798 8_4:-1357656 None:intergenic
ACCAGAACCATCAAGGTGGA+AGG 0.609801 8_4:+1354793 Msa1306390:CDS
CAAATGCTGTCCAAAAGGTG+AGG 0.611560 8_4:-1359000 None:intergenic
TTACCAAAATAACAAATGGG+AGG 0.613410 8_4:+1354568 Msa1306390:CDS
GAGGGTGTCCAAAATGTTGA+CGG 0.617850 8_4:+1354587 Msa1306390:CDS
ATAATTGATTGTGACGGTGT+TGG 0.621424 8_4:-1353615 None:intergenic
TCAGCAAAACATTCGAAGAG+AGG 0.626443 8_4:+1354357 Msa1306390:CDS
AAATGCTGTCCAAAAGGTGA+GGG 0.628319 8_4:-1358999 None:intergenic
AGAAAGCAGGCTGAACCAAA+TGG 0.632421 8_4:+1354878 Msa1306390:CDS
GAAACAGATCTTGTTGGGAG+AGG 0.634208 8_4:+1358105 Msa1306390:CDS
TATCGGGCTGATCGTGACAA+AGG 0.634849 8_4:+1354059 Msa1306390:CDS
CTTGTTGGGAGAGGAAGACG+AGG 0.636192 8_4:+1358114 Msa1306390:CDS
GGTGACAACAATGAAATGAA+GGG 0.649168 8_4:-1353689 None:intergenic
AGAACCAGCTAGAAGAGGAG+TGG 0.649931 8_4:+1358746 Msa1306390:three_prime_UTR
AGTTGATATAAATCAAGCAA+CGG 0.651746 8_4:-1354182 None:intergenic
AAGCAGGCTGAACCAAATGG+TGG 0.656382 8_4:+1354881 Msa1306390:CDS
AGAGATTTAAGGATGCAATG+AGG 0.659010 8_4:+1358298 Msa1306390:CDS
AAACAAGGCAAGAAAAGACA+TGG 0.666046 8_4:+1358377 Msa1306390:CDS
CATGTTGCTCTTAGTCACCA+AGG 0.670434 8_4:+1357670 Msa1306390:CDS
AAATCCCCAATGATAAAACA+CGG 0.674548 8_4:-1358226 None:intergenic
AGGTGGAAGGAGTATAAAGG+AGG 0.679711 8_4:+1354806 Msa1306390:CDS
ATTGTAGTAGAGGCATTGTG+AGG 0.687619 8_4:+1354132 Msa1306390:CDS
GCTGAATTTCATGGAAACGG+CGG 0.703390 8_4:+1354023 Msa1306390:CDS
TTATTGATAATTGATTGTGA+CGG 0.709411 8_4:-1353621 None:intergenic
CATTACCAGAACCATCAAGG+TGG 0.750119 8_4:+1354789 Msa1306390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTACAAATTTTATTTG+TGG + chr8_4:1359090-1359109 Msa1306390:three_prime_UTR 10.0%
!!! ATCAATTATCAATAATTTTC+AGG + chr8_4:1353629-1353648 Msa1306390:five_prime_UTR 15.0%
!! AACTAATACAATTACAAAAA+TGG - chr8_4:1353716-1353735 None:intergenic 15.0%
!! TATACACAAAATTGATAAAA+GGG - chr8_4:1353796-1353815 None:intergenic 15.0%
!! AATTTGATCACAAATAAATA+AGG - chr8_4:1353932-1353951 None:intergenic 15.0%
!!! TTTGTTTTGTCAAATTTTTT+CGG + chr8_4:1354094-1354113 Msa1306390:CDS 15.0%
!!! TTTTTCATAAACTAATTTCA+CGG - chr8_4:1354312-1354331 None:intergenic 15.0%
!! TAATTACCAAAATAACAAAT+GGG + chr8_4:1354565-1354584 Msa1306390:CDS 15.0%
!! AATCCTGTATAAAATAATTA+TGG - chr8_4:1354934-1354953 None:intergenic 15.0%
!!! AAAAATACCATATTTTTGTT+TGG + chr8_4:1355943-1355962 Msa1306390:intron 15.0%
!!! TTATTGATAATTGATTGTGA+CGG - chr8_4:1353624-1353643 None:intergenic 20.0%
!! TAATACAATTACAAAAATGG+CGG - chr8_4:1353713-1353732 None:intergenic 20.0%
!! GTATACACAAAATTGATAAA+AGG - chr8_4:1353797-1353816 None:intergenic 20.0%
!!! AATTCTTTTTCTAGATCTAT+CGG - chr8_4:1354422-1354441 None:intergenic 20.0%
!! CTAATTACCAAAATAACAAA+TGG + chr8_4:1354564-1354583 Msa1306390:CDS 20.0%
!!! ATGCCATAATTATTTTATAC+AGG + chr8_4:1354928-1354947 Msa1306390:intron 20.0%
!!! TAAGAAAAGATTCCTTTTTT+AGG + chr8_4:1355163-1355182 Msa1306390:intron 20.0%
!! TATGTAACCAAACAAAAATA+TGG - chr8_4:1355953-1355972 None:intergenic 20.0%
!! CTTGATTCTAAGTTATTTAT+AGG - chr8_4:1356277-1356296 None:intergenic 20.0%
!! ATAATAAATTAGTAATGTCC+AGG + chr8_4:1356367-1356386 Msa1306390:intron 20.0%
!! CATTAGACATTATTAATGAT+AGG - chr8_4:1356821-1356840 None:intergenic 20.0%
!! CATTAATAATGTCTAATGAT+AGG + chr8_4:1356823-1356842 Msa1306390:intron 20.0%
!! TCAAATCCTTCTAATAATTT+AGG + chr8_4:1356856-1356875 Msa1306390:intron 20.0%
!! CTATAACCTAAATTATTAGA+AGG - chr8_4:1356865-1356884 None:intergenic 20.0%
!! TTTATTTATCAAGTGTTATG+TGG + chr8_4:1357574-1357593 Msa1306390:intron 20.0%
!!! AAATTTTGGTGTAATATAGA+TGG + chr8_4:1358712-1358731 Msa1306390:intron 20.0%
!! TCATAAAAAATTTTGTTGGG+AGG + chr8_4:1353398-1353417 Msa1306390:five_prime_UTR 25.0%
!!! AGTTCTAAGAAATAGAATGA+AGG + chr8_4:1353421-1353440 Msa1306390:five_prime_UTR 25.0%
!!! TTGTATTAGTTTTCAGCTAT+AGG + chr8_4:1353725-1353744 Msa1306390:five_prime_UTR 25.0%
! TACCATCAACATATACAAAA+GGG + chr8_4:1353885-1353904 Msa1306390:five_prime_UTR 25.0%
!!! AATTTTTTCGGTTTACCTAA+AGG + chr8_4:1354106-1354125 Msa1306390:CDS 25.0%
!! AGTTGATATAAATCAAGCAA+CGG - chr8_4:1354185-1354204 None:intergenic 25.0%
! GATTCTGTGATAATTGAAAT+GGG + chr8_4:1354263-1354282 Msa1306390:CDS 25.0%
!! AAATATCTGAGTGATTTTGA+AGG + chr8_4:1354329-1354348 Msa1306390:CDS 25.0%
!! ATGATGTTACTTGATTCTAA+CGG - chr8_4:1354494-1354513 None:intergenic 25.0%
!!! ATTGATGATGACGAAAAATT+CGG + chr8_4:1354617-1354636 Msa1306390:CDS 25.0%
!! TTATACAGGATTTTACACAT+TGG + chr8_4:1354942-1354961 Msa1306390:intron 25.0%
!! TCTTTTCTTATATATGAGAC+CGG - chr8_4:1355153-1355172 None:intergenic 25.0%
! TTAATCGATGAACCTAAAAA+AGG - chr8_4:1355178-1355197 None:intergenic 25.0%
! CATTGAATAATTAACGTATC+TGG - chr8_4:1355227-1355246 None:intergenic 25.0%
!! ACTTTTCTTATATATGAGAC+CGG + chr8_4:1355262-1355281 Msa1306390:intron 25.0%
! TCAACAAAAGAAAGATATCA+TGG + chr8_4:1355364-1355383 Msa1306390:intron 25.0%
!!! CACATTAATTGGTATTGATT+GGG - chr8_4:1355543-1355562 None:intergenic 25.0%
! TGAATCTGATTATGAATCAT+CGG - chr8_4:1355977-1355996 None:intergenic 25.0%
! CAAGATTTAAACTGTGAATT+CGG - chr8_4:1356025-1356044 None:intergenic 25.0%
!! AAGTTAAGTTCTAATGCAAA+AGG - chr8_4:1356219-1356238 None:intergenic 25.0%
!! AATTTAGGGTTACAAAAGTT+AGG - chr8_4:1356398-1356417 None:intergenic 25.0%
! GAACATGTTAACAAATAAAC+AGG - chr8_4:1356434-1356453 None:intergenic 25.0%
! TTAACATGTTCAACTTGAAT+TGG + chr8_4:1356443-1356462 Msa1306390:intron 25.0%
! TAACATGTTCAACTTGAATT+GGG + chr8_4:1356444-1356463 Msa1306390:intron 25.0%
! AACTTAAAGACAAGTTCAAA+AGG - chr8_4:1356630-1356649 None:intergenic 25.0%
!!! TATGTTACTTTCTAAACTTC+TGG + chr8_4:1356671-1356690 Msa1306390:intron 25.0%
! TGTAGTCAATCATATCATAA+GGG - chr8_4:1356777-1356796 None:intergenic 25.0%
! ATGTAGTCAATCATATCATA+AGG - chr8_4:1356778-1356797 None:intergenic 25.0%
! TTATGATATGATTGACTACA+TGG + chr8_4:1356777-1356796 Msa1306390:intron 25.0%
!!! ATTTAGGTTATAGTTTTCCA+TGG + chr8_4:1356872-1356891 Msa1306390:intron 25.0%
! ATTGAATAGTTAGAGGTAAA+GGG - chr8_4:1356901-1356920 None:intergenic 25.0%
! AATTGAATAGTTAGAGGTAA+AGG - chr8_4:1356902-1356921 None:intergenic 25.0%
! TATTCAATTACCGTCTATAT+GGG + chr8_4:1356913-1356932 Msa1306390:intron 25.0%
!!! AATTCCATTAGTCACTTTTA+TGG + chr8_4:1357369-1357388 Msa1306390:intron 25.0%
! AAATCCATAAAAGTGACTAA+TGG - chr8_4:1357376-1357395 None:intergenic 25.0%
! TGATATCAAAACATTGAGAA+AGG + chr8_4:1357517-1357536 Msa1306390:intron 25.0%
! TGAAATTGAGATATAGTGAA+AGG + chr8_4:1357698-1357717 Msa1306390:CDS 25.0%
!! TTCTCTTTTCAGTAATATCT+GGG - chr8_4:1357921-1357940 None:intergenic 25.0%
!! TTTCTCTTTTCAGTAATATC+TGG - chr8_4:1357922-1357941 None:intergenic 25.0%
! TGATGAAGAAAAGAGATTTA+AGG + chr8_4:1358287-1358306 Msa1306390:CDS 25.0%
! ACCAAAATTTCTTAGTGAAA+GGG - chr8_4:1358702-1358721 None:intergenic 25.0%
! GACATGATTATGTTGTAAAA+TGG + chr8_4:1358853-1358872 Msa1306390:three_prime_UTR 25.0%
!!! TTCAAGTTTATGGTTTTAGT+TGG + chr8_4:1359054-1359073 Msa1306390:three_prime_UTR 25.0%
!!! TTACAAATTTTATTTGTGGC+AGG + chr8_4:1359094-1359113 Msa1306390:three_prime_UTR 25.0%
ATAAAATCCCTATCTTCTCT+CGG - chr8_4:1353460-1353479 None:intergenic 30.0%
CGCGAAAATAAATGACTAAA+AGG - chr8_4:1353500-1353519 None:intergenic 30.0%
TATGAAGAGTTATGACCATT+TGG - chr8_4:1353773-1353792 None:intergenic 30.0%
GTACCATCAACATATACAAA+AGG + chr8_4:1353884-1353903 Msa1306390:five_prime_UTR 30.0%
GGATTCTGTGATAATTGAAA+TGG + chr8_4:1354262-1354281 Msa1306390:CDS 30.0%
AAGAGAGGAGTTTGAAAAAT+GGG + chr8_4:1354372-1354391 Msa1306390:CDS 30.0%
AGTTTGAAAAATGGGAATCA+TGG + chr8_4:1354380-1354399 Msa1306390:CDS 30.0%
GTTTGAAAAATGGGAATCAT+GGG + chr8_4:1354381-1354400 Msa1306390:CDS 30.0%
CCTTTAGATTTGAGCATAAA+AGG - chr8_4:1354451-1354470 None:intergenic 30.0%
! CCTTTTATGCTCAAATCTAA+AGG + chr8_4:1354448-1354467 Msa1306390:CDS 30.0%
! TGATGTTACTTGATTCTAAC+GGG - chr8_4:1354493-1354512 None:intergenic 30.0%
ATAAATAACCATCACTCTTG+TGG - chr8_4:1354538-1354557 None:intergenic 30.0%
CAAGAGTGATGGTTATTTAT+TGG + chr8_4:1354538-1354557 Msa1306390:CDS 30.0%
TTACCAAAATAACAAATGGG+AGG + chr8_4:1354568-1354587 Msa1306390:CDS 30.0%
TACCAAAATAACAAATGGGA+GGG + chr8_4:1354569-1354588 Msa1306390:CDS 30.0%
ATAATTCTCGCAAACGTAAA+CGG + chr8_4:1354696-1354715 Msa1306390:CDS 30.0%
AAAAAGATAACTAGCCATTC+AGG - chr8_4:1354995-1355014 None:intergenic 30.0%
CAGAATTAAGTGCATTGTAA+TGG - chr8_4:1355034-1355053 None:intergenic 30.0%
!! AGATTTTGGAAAGAAACCAA+TGG - chr8_4:1355084-1355103 None:intergenic 30.0%
CAATAATAACATACTCCATC+CGG + chr8_4:1355131-1355150 Msa1306390:intron 30.0%
! TTCTCACTTGTTGATAAAGA+TGG - chr8_4:1355409-1355428 None:intergenic 30.0%
!! GCACATTAATTGGTATTGAT+TGG - chr8_4:1355544-1355563 None:intergenic 30.0%
ACATAGATAGGCACATTAAT+TGG - chr8_4:1355554-1355573 None:intergenic 30.0%
ATTAATGTGCCTATCTATGT+TGG + chr8_4:1355554-1355573 Msa1306390:intron 30.0%
AATATGACTCTCGATTCATT+GGG + chr8_4:1355588-1355607 Msa1306390:intron 30.0%
AATGTGAATCGTGTGATTTA+GGG - chr8_4:1355727-1355746 None:intergenic 30.0%
TAATGTGAATCGTGTGATTT+AGG - chr8_4:1355728-1355747 None:intergenic 30.0%
TGATTCAAACCTGGATTATT+TGG - chr8_4:1355839-1355858 None:intergenic 30.0%
CCAAGAAGAAGAAAAAAATG+GGG - chr8_4:1355901-1355920 None:intergenic 30.0%
GCCAAGAAGAAGAAAAAAAT+GGG - chr8_4:1355902-1355921 None:intergenic 30.0%
AGCCAAGAAGAAGAAAAAAA+TGG - chr8_4:1355903-1355922 None:intergenic 30.0%
ATCAGATTCAATTCACAATC+TGG + chr8_4:1355987-1356006 Msa1306390:intron 30.0%
TCAGATTCAATTCACAATCT+GGG + chr8_4:1355988-1356007 Msa1306390:intron 30.0%
TTGGAGTAAACTCAATAACA+TGG - chr8_4:1356057-1356076 None:intergenic 30.0%
TTAGAACTTAACTTAGAGTC+AGG + chr8_4:1356225-1356244 Msa1306390:intron 30.0%
TAGAACTTAACTTAGAGTCA+GGG + chr8_4:1356226-1356245 Msa1306390:intron 30.0%
AGAATCAAGTATGTATCACA+AGG + chr8_4:1356288-1356307 Msa1306390:intron 30.0%
AAAAGTTTATCTCTCTCTGA+GGG - chr8_4:1356514-1356533 None:intergenic 30.0%
TAAAAGTTTATCTCTCTCTG+AGG - chr8_4:1356515-1356534 None:intergenic 30.0%
ATTGACTACATGGAAAACAA+TGG + chr8_4:1356787-1356806 Msa1306390:intron 30.0%
CTATTCAATTACCGTCTATA+TGG + chr8_4:1356912-1356931 Msa1306390:intron 30.0%
!! CAGTAAAAGCATTAGTAAGA+AGG - chr8_4:1356944-1356963 None:intergenic 30.0%
! CTTCTTACTAATGCTTTTAC+TGG + chr8_4:1356942-1356961 Msa1306390:intron 30.0%
AATTGGTACAATCTTTCCTT+AGG - chr8_4:1356992-1357011 None:intergenic 30.0%
AACATCTATCATGCAGAAAT+TGG - chr8_4:1357009-1357028 None:intergenic 30.0%
! AAAGCATTAGGGAGAAAATT+GGG - chr8_4:1357035-1357054 None:intergenic 30.0%
!! CCTTAGAAATGAAAGCATTA+GGG - chr8_4:1357046-1357065 None:intergenic 30.0%
CCTAATGCTTTCATTTCTAA+GGG + chr8_4:1357044-1357063 Msa1306390:intron 30.0%
!! ATCAATTTTGCTATGCTTTG+TGG + chr8_4:1357078-1357097 Msa1306390:intron 30.0%
!! TGAAATCTGTTGTTTCAAAG+TGG + chr8_4:1357140-1357159 Msa1306390:intron 30.0%
TATGGATTTGTATAAAGCAC+AGG + chr8_4:1357387-1357406 Msa1306390:intron 30.0%
ATTTGTATAAAGCACAGGAA+AGG + chr8_4:1357392-1357411 Msa1306390:intron 30.0%
ATTCAATGAAGAACCTATTG+AGG - chr8_4:1357477-1357496 None:intergenic 30.0%
!!! GGTTTTGAATCATCTTTAAC+AGG - chr8_4:1358078-1358097 None:intergenic 30.0%
AAATCCCCAATGATAAAACA+CGG - chr8_4:1358229-1358248 None:intergenic 30.0%
TCATTGGGGATTTGATAAAA+TGG + chr8_4:1358236-1358255 Msa1306390:CDS 30.0%
CATTGGGGATTTGATAAAAT+GGG + chr8_4:1358237-1358256 Msa1306390:CDS 30.0%
!! GTTCCAAAAAGACTTGTTTT+GGG - chr8_4:1358337-1358356 None:intergenic 30.0%
!! TGTTCCAAAAAGACTTGTTT+TGG - chr8_4:1358338-1358357 None:intergenic 30.0%
! GAAGTTGAATTTGGATCTTT+TGG + chr8_4:1358486-1358505 Msa1306390:CDS 30.0%
! CATTTTCTCAAACCTCAAAA+TGG - chr8_4:1358618-1358637 None:intergenic 30.0%
! TCCCTTTCACTAAGAAATTT+TGG + chr8_4:1358698-1358717 Msa1306390:intron 30.0%
CACCAAAATTTCTTAGTGAA+AGG - chr8_4:1358703-1358722 None:intergenic 30.0%
TTGTAAAATGGCAGTCTATT+GGG + chr8_4:1358865-1358884 Msa1306390:three_prime_UTR 30.0%
AGCACTAATGAAAACCAAAA+GGG - chr8_4:1358963-1358982 None:intergenic 30.0%
TAAAATCCCTATCTTCTCTC+GGG - chr8_4:1353459-1353478 None:intergenic 35.0%
!! ATTTATTTTCGCGCTGTGTT+AGG + chr8_4:1353507-1353526 Msa1306390:intron 35.0%
CTGAATTTCAATGCTGCAAA+TGG - chr8_4:1353583-1353602 None:intergenic 35.0%
ATAATTGATTGTGACGGTGT+TGG - chr8_4:1353618-1353637 None:intergenic 35.0%
GGTGACAACAATGAAATGAA+GGG - chr8_4:1353692-1353711 None:intergenic 35.0%
AGCTATAGGTCTTGATTATC+AGG + chr8_4:1353739-1353758 Msa1306390:five_prime_UTR 35.0%
TATCAGGTAAATCTGCCAAA+TGG + chr8_4:1353755-1353774 Msa1306390:five_prime_UTR 35.0%
! AGCCCTTTTGTATATGTTGA+TGG - chr8_4:1353890-1353909 None:intergenic 35.0%
CTCTACTACAATTCTCCTTT+AGG - chr8_4:1354124-1354143 None:intergenic 35.0%
CTAAAGGAGAATTGTAGTAG+AGG + chr8_4:1354122-1354141 Msa1306390:CDS 35.0%
TTCTTCCTTGTGAAGGAAAA+AGG + chr8_4:1354206-1354225 Msa1306390:CDS 35.0%
!! GGGTTTTAACCTTCATGTTT+TGG + chr8_4:1354283-1354302 Msa1306390:CDS 35.0%
!! ATCTGAGTGATTTTGAAGGT+TGG + chr8_4:1354333-1354352 Msa1306390:CDS 35.0%
GAAGAGAGGAGTTTGAAAAA+TGG + chr8_4:1354371-1354390 Msa1306390:CDS 35.0%
TTTGTTAACCACAAGAGTGA+TGG + chr8_4:1354527-1354546 Msa1306390:CDS 35.0%
! TATCATCACCGTCAACATTT+TGG - chr8_4:1354598-1354617 None:intergenic 35.0%
TAATTCTCGCAAACGTAAAC+GGG + chr8_4:1354697-1354716 Msa1306390:CDS 35.0%
!!! ACTTTTTTGTTCAGTTGCTG+AGG + chr8_4:1354834-1354853 Msa1306390:CDS 35.0%
!!! CTTTTTTGTTCAGTTGCTGA+GGG + chr8_4:1354835-1354854 Msa1306390:CDS 35.0%
AATATGTACTCACAAGCCAT+TGG + chr8_4:1355065-1355084 Msa1306390:intron 35.0%
TTCTTATATATGAGACCGGA+TGG - chr8_4:1355266-1355285 None:intergenic 35.0%
! ACGTATCTGGTTTATAATGC+AGG - chr8_4:1355214-1355233 None:intergenic 35.0%
TTTCTTATATATGAGACCGG+AGG + chr8_4:1355265-1355284 Msa1306390:intron 35.0%
TTCTTATATATGAGACCGGA+GGG + chr8_4:1355266-1355285 Msa1306390:intron 35.0%
TAGAGTTGTAACTATGAGAG+CGG - chr8_4:1355333-1355352 None:intergenic 35.0%
!! TTTCTTTTGTTGAAGTGCCT+AGG - chr8_4:1355357-1355376 None:intergenic 35.0%
CATGTATTCTACTGAAAACC+AGG - chr8_4:1355486-1355505 None:intergenic 35.0%
AATCCCTATCCAACATAGAT+AGG - chr8_4:1355566-1355585 None:intergenic 35.0%
CAATATGACTCTCGATTCAT+TGG + chr8_4:1355587-1355606 Msa1306390:intron 35.0%
AATCTGAATCATGCAACTTC+GGG - chr8_4:1355637-1355656 None:intergenic 35.0%
GAATCTGAATCATGCAACTT+CGG - chr8_4:1355638-1355657 None:intergenic 35.0%
ATGTGAATCGTGTGATTTAG+GGG - chr8_4:1355726-1355745 None:intergenic 35.0%
TCACGTATTCCAAATAATCC+AGG + chr8_4:1355827-1355846 Msa1306390:intron 35.0%
TCTTCAATGTGATTCAAACC+TGG - chr8_4:1355848-1355867 None:intergenic 35.0%
AGAAGAAAAAAATGGGGAGA+CGG - chr8_4:1355895-1355914 None:intergenic 35.0%
!!! CCCCATTTTTTTCTTCTTCT+TGG + chr8_4:1355898-1355917 Msa1306390:intron 35.0%
CAATTCACAATCTGGGAAAT+AGG + chr8_4:1355995-1356014 Msa1306390:intron 35.0%
AAGTAGCCTTTACACACATA+AGG + chr8_4:1356147-1356166 Msa1306390:intron 35.0%
GCTTTACCTTATGTGTGTAA+AGG - chr8_4:1356156-1356175 None:intergenic 35.0%
AGAACTTAACTTAGAGTCAG+GGG + chr8_4:1356227-1356246 Msa1306390:intron 35.0%
AAGTATGTATCACAAGGTGT+GGG + chr8_4:1356294-1356313 Msa1306390:intron 35.0%
! GTTTTCACTTGAACTTGTAC+AGG - chr8_4:1356324-1356343 None:intergenic 35.0%
TACAAGTTCAAGTGAAAACG+AGG + chr8_4:1356325-1356344 Msa1306390:intron 35.0%
ACAAGTTCAAGTGAAAACGA+GGG + chr8_4:1356326-1356345 Msa1306390:intron 35.0%
TACAAAAGTTAGGTAGAACC+TGG - chr8_4:1356388-1356407 None:intergenic 35.0%
GTCAACTGCAGTTCAATTTA+GGG - chr8_4:1356412-1356431 None:intergenic 35.0%
TAACATAACCAGAGAAGCAA+AGG - chr8_4:1356658-1356677 None:intergenic 35.0%
TCATATCATAAGGGTGGTAT+TGG - chr8_4:1356768-1356787 None:intergenic 35.0%
AGTCAATCATATCATAAGGG+TGG - chr8_4:1356774-1356793 None:intergenic 35.0%
GACGGTAATTGAATAGTTAG+AGG - chr8_4:1356908-1356927 None:intergenic 35.0%
ACACATGAAAAAACCACCTA+AGG + chr8_4:1356973-1356992 Msa1306390:intron 35.0%
AAGCATTAGGGAGAAAATTG+GGG - chr8_4:1357034-1357053 None:intergenic 35.0%
!! GAAAGCATTAGGGAGAAAAT+TGG - chr8_4:1357036-1357055 None:intergenic 35.0%
CCCTAATGCTTTCATTTCTA+AGG + chr8_4:1357043-1357062 Msa1306390:intron 35.0%
!! CCCTTAGAAATGAAAGCATT+AGG - chr8_4:1357047-1357066 None:intergenic 35.0%
GCTATGCTTTGTGGAAAATA+TGG + chr8_4:1357087-1357106 Msa1306390:intron 35.0%
GCATAGTCAACTTTCAATTC+TGG + chr8_4:1357167-1357186 Msa1306390:intron 35.0%
AGACGTTGCATTTACTAGAT+TGG - chr8_4:1357244-1357263 None:intergenic 35.0%
ATCTAGTAAATGCAACGTCT+AGG + chr8_4:1357244-1357263 Msa1306390:intron 35.0%
TCTAGTAAATGCAACGTCTA+GGG + chr8_4:1357245-1357264 Msa1306390:intron 35.0%
ATTGAGGATAGGGAATTACA+AGG - chr8_4:1357461-1357480 None:intergenic 35.0%
TGTAATTCCCTATCCTCAAT+AGG + chr8_4:1357461-1357480 Msa1306390:intron 35.0%
TGAAGAACCTATTGAGGATA+GGG - chr8_4:1357471-1357490 None:intergenic 35.0%
ATGAAGAACCTATTGAGGAT+AGG - chr8_4:1357472-1357491 None:intergenic 35.0%
ATCTCAATTTCACTGTACCT+TGG - chr8_4:1357690-1357709 None:intergenic 35.0%
TGCAATTCATGTTCTGGTAA+GGG + chr8_4:1357754-1357773 Msa1306390:CDS 35.0%
GGTAAGGGAAATAAATTGCA+CGG + chr8_4:1357769-1357788 Msa1306390:CDS 35.0%
! CTTTTCAGTAATATCTGGGT+TGG - chr8_4:1357917-1357936 None:intergenic 35.0%
CGAAAATCATCATCCATAGA+TGG - chr8_4:1357952-1357971 None:intergenic 35.0%
! TTTCTGAGAGTGACTCTAAA+TGG + chr8_4:1358034-1358053 Msa1306390:CDS 35.0%
GATTTCATATTGCTGAGAAC+AGG + chr8_4:1358178-1358197 Msa1306390:CDS 35.0%
! TGCATTCCGTGTTTTATCAT+TGG + chr8_4:1358220-1358239 Msa1306390:CDS 35.0%
! GCATTCCGTGTTTTATCATT+GGG + chr8_4:1358221-1358240 Msa1306390:CDS 35.0%
! CATTCCGTGTTTTATCATTG+GGG + chr8_4:1358222-1358241 Msa1306390:CDS 35.0%
AGAGATTTAAGGATGCAATG+AGG + chr8_4:1358298-1358317 Msa1306390:CDS 35.0%
!!! AAAAAGACTTGTTTTGGGAG+GGG - chr8_4:1358332-1358351 None:intergenic 35.0%
!!! CAAAAAGACTTGTTTTGGGA+GGG - chr8_4:1358333-1358352 None:intergenic 35.0%
!! TTGTTTCGAAAGTATCTGGA+TGG - chr8_4:1358363-1358382 None:intergenic 35.0%
ATCCAGATACTTTCGAAACA+AGG + chr8_4:1358362-1358381 Msa1306390:CDS 35.0%
! GATGATGACGAAGTTGAATT+TGG + chr8_4:1358477-1358496 Msa1306390:CDS 35.0%
! GAATTTGGATCTTTTGGTGA+TGG + chr8_4:1358492-1358511 Msa1306390:CDS 35.0%
!!! GATCTTTTGGTGATGGTTTT+GGG + chr8_4:1358499-1358518 Msa1306390:CDS 35.0%
AGCTATCAAGCATCCATATA+TGG + chr8_4:1358527-1358546 Msa1306390:CDS 35.0%
GGTTTGAGAAAATGTCTTCT+TGG + chr8_4:1358624-1358643 Msa1306390:intron 35.0%
TTTCTACTTTCTCCTTATGC+AGG + chr8_4:1358669-1358688 Msa1306390:intron 35.0%
! GATTTAGAACATGTCCATAG+TGG - chr8_4:1358795-1358814 None:intergenic 35.0%
GTTGTAAAATGGCAGTCTAT+TGG + chr8_4:1358864-1358883 Msa1306390:three_prime_UTR 35.0%
AAAGGGATAAAAGTTGAGGA+GGG - chr8_4:1358946-1358965 None:intergenic 35.0%
AAAAGGGATAAAAGTTGAGG+AGG - chr8_4:1358947-1358966 None:intergenic 35.0%
! TCCTCAACTTTTATCCCTTT+TGG + chr8_4:1358946-1358965 Msa1306390:intron 35.0%
ACCAAAAGGGATAAAAGTTG+AGG - chr8_4:1358950-1358969 None:intergenic 35.0%
CAGCACTAATGAAAACCAAA+AGG - chr8_4:1358964-1358983 None:intergenic 35.0%
CTGTAAAACTATCGTTCAGT+CGG + chr8_4:1359025-1359044 Msa1306390:three_prime_UTR 35.0%
CGGTGACAACAATGAAATGA+AGG - chr8_4:1353693-1353712 None:intergenic 40.0%
!! CATATACAAAAGGGCTAGCT+AGG + chr8_4:1353894-1353913 Msa1306390:five_prime_UTR 40.0%
GACGCTGAATTTCATGGAAA+CGG + chr8_4:1354020-1354039 Msa1306390:CDS 40.0%
GCGGTTGTATTGTTGAGTAT+CGG + chr8_4:1354042-1354061 Msa1306390:CDS 40.0%
CGGTTGTATTGTTGAGTATC+GGG + chr8_4:1354043-1354062 Msa1306390:CDS 40.0%
!! ATTGTAGTAGAGGCATTGTG+AGG + chr8_4:1354132-1354151 Msa1306390:CDS 40.0%
TCAACTGTTCTTCCTTGTGA+AGG + chr8_4:1354199-1354218 Msa1306390:CDS 40.0%
TTCCTTGTGAAGGAAAAAGG+TGG + chr8_4:1354209-1354228 Msa1306390:CDS 40.0%
TCCTTGTGAAGGAAAAAGGT+GGG + chr8_4:1354210-1354229 Msa1306390:CDS 40.0%
! TATGATGCGGTATCGAGAAA+AGG + chr8_4:1354233-1354252 Msa1306390:CDS 40.0%
! ATGATGCGGTATCGAGAAAA+GGG + chr8_4:1354234-1354253 Msa1306390:CDS 40.0%
TCAGCAAAACATTCGAAGAG+AGG + chr8_4:1354357-1354376 Msa1306390:CDS 40.0%
!!! CACCCTCCCATTTGTTATTT+TGG - chr8_4:1354574-1354593 None:intergenic 40.0%
GATGACGAAAAATTCGGCAA+TGG + chr8_4:1354623-1354642 Msa1306390:CDS 40.0%
! AAAATTCGGCAATGGTGTTG+AGG + chr8_4:1354631-1354650 Msa1306390:CDS 40.0%
! TTGTGTGGAAATCTCTGAGA+AGG + chr8_4:1354670-1354689 Msa1306390:CDS 40.0%
TTATACTCCTTCCACCTTGA+TGG - chr8_4:1354803-1354822 None:intergenic 40.0%
! TCAAGGTGGAAGGAGTATAA+AGG + chr8_4:1354803-1354822 Msa1306390:CDS 40.0%
GCAACTGAACAAAAAAGTCC+TGG - chr8_4:1354832-1354851 None:intergenic 40.0%
TTCCATATCCTGAACCTGAA+TGG + chr8_4:1354978-1354997 Msa1306390:intron 40.0%
! ATAACTAGCCATTCAGGTTC+AGG - chr8_4:1354989-1355008 None:intergenic 40.0%
! CAGTTAGCAAGCTGAGATTT+TGG - chr8_4:1355098-1355117 None:intergenic 40.0%
CTACAGGAATTGGATAGCTT+TGG + chr8_4:1355290-1355309 Msa1306390:intron 40.0%
CATAGTTACAACTCTAGCCT+AGG + chr8_4:1355337-1355356 Msa1306390:intron 40.0%
!! AGTGCAGTTACAGTTCTGAA+TGG - chr8_4:1355457-1355476 None:intergenic 40.0%
TGTGCCTATCTATGTTGGAT+AGG + chr8_4:1355559-1355578 Msa1306390:intron 40.0%
GTGCCTATCTATGTTGGATA+GGG + chr8_4:1355560-1355579 Msa1306390:intron 40.0%
ATCTGAATCATGCAACTTCG+GGG - chr8_4:1355636-1355655 None:intergenic 40.0%
TGTGAATCGTGTGATTTAGG+GGG - chr8_4:1355725-1355744 None:intergenic 40.0%
TTACAAACCAGTTTGCATGC+TGG - chr8_4:1355755-1355774 None:intergenic 40.0%
! ATGTAAAGGCACACTCTCTT+TGG - chr8_4:1356076-1356095 None:intergenic 40.0%
! GAGAGTGTGCCTTTACATAA+TGG + chr8_4:1356078-1356097 Msa1306390:intron 40.0%
GCAAACTCGCCATTATGTAA+AGG - chr8_4:1356090-1356109 None:intergenic 40.0%
ATCCTATCCTAATCCTGCAA+TGG + chr8_4:1356187-1356206 Msa1306390:intron 40.0%
TTAACTTAGAGTCAGGGGAA+TGG + chr8_4:1356232-1356251 Msa1306390:intron 40.0%
CAAGTATGTATCACAAGGTG+TGG + chr8_4:1356293-1356312 Msa1306390:intron 40.0%
GGTCAACTGCAGTTCAATTT+AGG - chr8_4:1356413-1356432 None:intergenic 40.0%
! GTTTTATGCCTTTGCTTCTC+TGG + chr8_4:1356647-1356666 Msa1306390:intron 40.0%
!! ATCATAAGGGTGGTATTGGT+GGG - chr8_4:1356764-1356783 None:intergenic 40.0%
! TATCATAAGGGTGGTATTGG+TGG - chr8_4:1356765-1356784 None:intergenic 40.0%
GAAGGTTAGACCCATATAGA+CGG - chr8_4:1356926-1356945 None:intergenic 40.0%
TGGTACAATCTTTCCTTAGG+TGG - chr8_4:1356989-1357008 None:intergenic 40.0%
GACAACGACATTATCATCAC+AGG - chr8_4:1357211-1357230 None:intergenic 40.0%
CTAGTAAATGCAACGTCTAG+GGG + chr8_4:1357246-1357265 Msa1306390:intron 40.0%
TGACCATTCTGATATGCACT+GGG + chr8_4:1357419-1357438 Msa1306390:intron 40.0%
GCATATGTATGCTTTGCAGA+AGG + chr8_4:1357618-1357637 Msa1306390:intron 40.0%
AGCAACATGATCCTCATACA+TGG - chr8_4:1357659-1357678 None:intergenic 40.0%
CTTTGCTGCAATTCATGTTC+TGG + chr8_4:1357748-1357767 Msa1306390:CDS 40.0%
CTGCAATTCATGTTCTGGTA+AGG + chr8_4:1357753-1357772 Msa1306390:CDS 40.0%
ATTGCACGGTTCAGTCAATA+TGG + chr8_4:1357783-1357802 Msa1306390:CDS 40.0%
TTTCTCTTCTCAGTTGCATC+TGG - chr8_4:1357886-1357905 None:intergenic 40.0%
GAGAAAATCTGAGCCATCTA+TGG + chr8_4:1357936-1357955 Msa1306390:CDS 40.0%
!! CGTGAAAAGCTTGTTTCTGT+AGG + chr8_4:1357970-1357989 Msa1306390:CDS 40.0%
GAGAGTGACTCTAAATGGTT+AGG + chr8_4:1358039-1358058 Msa1306390:CDS 40.0%
AATGGTTAGGCACACAAGTA+TGG + chr8_4:1358052-1358071 Msa1306390:CDS 40.0%
ACAAGATCTGTTTCGGTAGT+AGG - chr8_4:1358099-1358118 None:intergenic 40.0%
ACTACCGAAACAGATCTTGT+TGG + chr8_4:1358099-1358118 Msa1306390:CDS 40.0%
CTACCGAAACAGATCTTGTT+GGG + chr8_4:1358100-1358119 Msa1306390:CDS 40.0%
TCTCCCAACAAGATCTGTTT+CGG - chr8_4:1358106-1358125 None:intergenic 40.0%
GGGATTTGATAAAATGGGTG+AGG + chr8_4:1358242-1358261 Msa1306390:CDS 40.0%
!!! CCAAAAAGACTTGTTTTGGG+AGG - chr8_4:1358334-1358353 None:intergenic 40.0%
! CCTCCCAAAACAAGTCTTTT+TGG + chr8_4:1358331-1358350 Msa1306390:CDS 40.0%
!! TGCCTTGTTTCGAAAGTATC+TGG - chr8_4:1358367-1358386 None:intergenic 40.0%
!!! GGATCTTTTGGTGATGGTTT+TGG + chr8_4:1358498-1358517 Msa1306390:CDS 40.0%
!!! TTTTGGTGATGGTTTTGGGA+GGG + chr8_4:1358503-1358522 Msa1306390:CDS 40.0%
! GCATCCATATATGGATTGCT+TGG + chr8_4:1358536-1358555 Msa1306390:CDS 40.0%
CACTCCAAGCAATCCATATA+TGG - chr8_4:1358543-1358562 None:intergenic 40.0%
AAGAAAGAACCAGCTAGAAG+AGG + chr8_4:1358741-1358760 Msa1306390:three_prime_UTR 40.0%
TGGAATTTGGAAAGCCACTA+TGG + chr8_4:1358778-1358797 Msa1306390:three_prime_UTR 40.0%
AAGGGATAAAAGTTGAGGAG+GGG - chr8_4:1358945-1358964 None:intergenic 40.0%
!!! TCGTTTTTTCCCTCACCTTT+TGG + chr8_4:1358990-1359009 Msa1306390:three_prime_UTR 40.0%
AAATGCTGTCCAAAAGGTGA+GGG - chr8_4:1359002-1359021 None:intergenic 40.0%
!! TCGGAGCACTTTCAAGTTTA+TGG + chr8_4:1359044-1359063 Msa1306390:three_prime_UTR 40.0%
AACAGAGAGTCAGACGTTCA+TGG + chr8_4:1353971-1353990 Msa1306390:exon 45.0%
AGTCAGACGTTCATGGCAAA+CGG + chr8_4:1353978-1353997 Msa1306390:exon 45.0%
ATTCAGCGTCTAGACGATCA+AGG - chr8_4:1354010-1354029 None:intergenic 45.0%
CGTCTAGACGCTGAATTTCA+TGG + chr8_4:1354014-1354033 Msa1306390:CDS 45.0%
GCTGAATTTCATGGAAACGG+CGG + chr8_4:1354023-1354042 Msa1306390:CDS 45.0%
! ACCCACCTTTTTCCTTCACA+AGG - chr8_4:1354214-1354233 None:intergenic 45.0%
GGAAAAAGGTGGGTATGATG+CGG + chr8_4:1354220-1354239 Msa1306390:CDS 45.0%
! GGTATCGAGAAAAGGGTTGT+GGG + chr8_4:1354241-1354260 Msa1306390:CDS 45.0%
TCACGGATGCCAAAACATGA+AGG - chr8_4:1354295-1354314 None:intergenic 45.0%
!! GAGGGTGTCCAAAATGTTGA+CGG + chr8_4:1354587-1354606 Msa1306390:CDS 45.0%
TTATCTAGCTGCCTCTTGTG+TGG + chr8_4:1354655-1354674 Msa1306390:CDS 45.0%
CTCAGAGATTTCCACACAAG+AGG - chr8_4:1354669-1354688 None:intergenic 45.0%
CGTAAACGGGAATCGATATC+AGG + chr8_4:1354710-1354729 Msa1306390:CDS 45.0%
ACGGGAATCGATATCAGGAA+TGG + chr8_4:1354715-1354734 Msa1306390:CDS 45.0%
CGATATCAGGAATGGTGAAC+TGG + chr8_4:1354723-1354742 Msa1306390:CDS 45.0%
!! CTTGATGGTTCTGGTAATGG+TGG - chr8_4:1354788-1354807 None:intergenic 45.0%
CACCATTACCAGAACCATCA+AGG + chr8_4:1354786-1354805 Msa1306390:CDS 45.0%
!! CACCTTGATGGTTCTGGTAA+TGG - chr8_4:1354791-1354810 None:intergenic 45.0%
CATTACCAGAACCATCAAGG+TGG + chr8_4:1354789-1354808 Msa1306390:CDS 45.0%
! AGGTGGAAGGAGTATAAAGG+AGG + chr8_4:1354806-1354825 Msa1306390:CDS 45.0%
TGTTCTGTCTGTGAGAAAGC+AGG + chr8_4:1354865-1354884 Msa1306390:CDS 45.0%
AGAAAGCAGGCTGAACCAAA+TGG + chr8_4:1354878-1354897 Msa1306390:CDS 45.0%
TGGGAAGATGATCCACCATT+TGG - chr8_4:1354896-1354915 None:intergenic 45.0%
!! AAATGGTGGATCATCTTCCC+AGG + chr8_4:1354895-1354914 Msa1306390:CDS 45.0%
! ATGGCATCGAGAGTATACCT+GGG - chr8_4:1354915-1354934 None:intergenic 45.0%
! TATGGCATCGAGAGTATACC+TGG - chr8_4:1354916-1354935 None:intergenic 45.0%
! AGCCATTCAGGTTCAGGATA+TGG - chr8_4:1354983-1355002 None:intergenic 45.0%
!! CTCAGCTTGCTAACTGCTAA+AGG + chr8_4:1355102-1355121 Msa1306390:intron 45.0%
!! GAGCGGTCATTTTGTAGACT+GGG - chr8_4:1355316-1355335 None:intergenic 45.0%
!! AGAGCGGTCATTTTGTAGAC+TGG - chr8_4:1355317-1355336 None:intergenic 45.0%
TGTAACTGCACTATTGAGCC+TGG + chr8_4:1355465-1355484 Msa1306390:intron 45.0%
GCATGATTCAGATTCTGCTG+CGG + chr8_4:1355643-1355662 Msa1306390:intron 45.0%
CATGATTCAGATTCTGCTGC+GGG + chr8_4:1355644-1355663 Msa1306390:intron 45.0%
GTGAATCGTGTGATTTAGGG+GGG - chr8_4:1355724-1355743 None:intergenic 45.0%
TTATGCTCCAGCATGCAAAC+TGG + chr8_4:1355745-1355764 Msa1306390:intron 45.0%
TTTGCTCCCTTGTTAACTCG+TGG + chr8_4:1356105-1356124 Msa1306390:intron 45.0%
CACCATTGCAGGATTAGGAT+AGG - chr8_4:1356192-1356211 None:intergenic 45.0%
GTTCACACCATTGCAGGATT+AGG - chr8_4:1356197-1356216 None:intergenic 45.0%
CAAAAGGTTCACACCATTGC+AGG - chr8_4:1356203-1356222 None:intergenic 45.0%
TTAGAGTCAGGGGAATGGAA+GGG + chr8_4:1356237-1356256 Msa1306390:intron 45.0%
AGTGAAAACGAGGGCTGATT+TGG + chr8_4:1356335-1356354 Msa1306390:intron 45.0%
TTAGAGGTAAAGGGAGACCA+TGG - chr8_4:1356892-1356911 None:intergenic 45.0%
TCAAGCAACTTGACTCTGTG+AGG - chr8_4:1357302-1357321 None:intergenic 45.0%
GTGACCATTCTGATATGCAC+TGG + chr8_4:1357418-1357437 Msa1306390:intron 45.0%
TGACCCAGTGCATATCAGAA+TGG - chr8_4:1357425-1357444 None:intergenic 45.0%
ACATGATCCTCATACATGGC+AGG - chr8_4:1357655-1357674 None:intergenic 45.0%
CATGTTGCTCTTAGTCACCA+AGG + chr8_4:1357670-1357689 Msa1306390:CDS 45.0%
CAGCGAGATTTAACAGAGAC+AGG - chr8_4:1357727-1357746 None:intergenic 45.0%
GGAGTCAGAAATATGTCCTC+TGG + chr8_4:1357804-1357823 Msa1306390:CDS 45.0%
!!! TTGGCTGTTGTTTTCTCCAG+AGG - chr8_4:1357823-1357842 None:intergenic 45.0%
! TTCTTTTCAGTGACGACGTC+TGG - chr8_4:1357847-1357866 None:intergenic 45.0%
CTTCTCAGTTGCATCTGGTT+TGG - chr8_4:1357881-1357900 None:intergenic 45.0%
! TGTAGGTCACCTTTTCCAAG+CGG + chr8_4:1357987-1358006 Msa1306390:CDS 45.0%
GAAACTACACCAGTCCATTC+CGG - chr8_4:1358018-1358037 None:intergenic 45.0%
GAAACAGATCTTGTTGGGAG+AGG + chr8_4:1358105-1358124 Msa1306390:CDS 45.0%
AAGTGTAGCTGCAACGTTCA+AGG + chr8_4:1358138-1358157 Msa1306390:CDS 45.0%
GTGAGGAAGTTTCACTTCGA+TGG + chr8_4:1358259-1358278 Msa1306390:CDS 45.0%
TCATCGCTGTCAACAGTCTT+CGG - chr8_4:1358462-1358481 None:intergenic 45.0%
!!! CTTTTGGTGATGGTTTTGGG+AGG + chr8_4:1358502-1358521 Msa1306390:CDS 45.0%
!! AAGTGCGATGAGCCATTTTG+AGG + chr8_4:1358603-1358622 Msa1306390:three_prime_UTR 45.0%
AAGGGATGCATTCCTGCATA+AGG - chr8_4:1358684-1358703 None:intergenic 45.0%
! GTGGTTGATGCGTTGGAATT+TGG + chr8_4:1358765-1358784 Msa1306390:three_prime_UTR 45.0%
TCTATTGGGTGCTCCTTGAA+GGG + chr8_4:1358879-1358898 Msa1306390:three_prime_UTR 45.0%
AGGGATAAAAGTTGAGGAGG+GGG - chr8_4:1358944-1358963 None:intergenic 45.0%
CAAATGCTGTCCAAAAGGTG+AGG - chr8_4:1359003-1359022 None:intergenic 45.0%
CAGCACAAATGCTGTCCAAA+AGG - chr8_4:1359008-1359027 None:intergenic 45.0%
AAGCAGCCCGAGAGAAGATA+GGG + chr8_4:1353450-1353469 Msa1306390:intron 50.0%
GTCAGACGTTCATGGCAAAC+GGG + chr8_4:1353979-1353998 Msa1306390:exon 50.0%
TATCGGGCTGATCGTGACAA+AGG + chr8_4:1354059-1354078 Msa1306390:CDS 50.0%
! CGGTATCGAGAAAAGGGTTG+TGG + chr8_4:1354240-1354259 Msa1306390:CDS 50.0%
CAGGAATGGTGAACTGGACA+CGG + chr8_4:1354729-1354748 Msa1306390:CDS 50.0%
GGTGGAGCTACAGGATCAAA+CGG - chr8_4:1354770-1354789 None:intergenic 50.0%
!! TCTGGTAATGGTGGAGCTAC+AGG - chr8_4:1354779-1354798 None:intergenic 50.0%
ACCAGAACCATCAAGGTGGA+AGG + chr8_4:1354793-1354812 Msa1306390:CDS 50.0%
! TCCTTCCACCTTGATGGTTC+TGG - chr8_4:1354797-1354816 None:intergenic 50.0%
! GAAGGAGTATAAAGGAGGCC+AGG + chr8_4:1354811-1354830 Msa1306390:CDS 50.0%
TTGTTCAGTTGCTGAGGGCA+AGG + chr8_4:1354840-1354859 Msa1306390:CDS 50.0%
TGTTCAGTTGCTGAGGGCAA+GGG + chr8_4:1354841-1354860 Msa1306390:CDS 50.0%
AAGCAGGCTGAACCAAATGG+TGG + chr8_4:1354881-1354900 Msa1306390:CDS 50.0%
TCCAATTCCTGTAGTCCCTC+CGG - chr8_4:1355284-1355303 None:intergenic 50.0%
GCGCAACCTTGAAATGGACA+GGG + chr8_4:1355666-1355685 Msa1306390:intron 50.0%
ACAGGGTCGCCCAACTAAAA+CGG + chr8_4:1355683-1355702 Msa1306390:intron 50.0%
!!! CCCTGACAGCCGTTTTAGTT+GGG - chr8_4:1355695-1355714 None:intergenic 50.0%
CCCAACTAAAACGGCTGTCA+GGG + chr8_4:1355692-1355711 Msa1306390:intron 50.0%
!! ACCCTGACAGCCGTTTTAGT+TGG - chr8_4:1355696-1355715 None:intergenic 50.0%
CCGTGACCACGAGTTAACAA+GGG - chr8_4:1356114-1356133 None:intergenic 50.0%
CCCTTGTTAACTCGTGGTCA+CGG + chr8_4:1356111-1356130 Msa1306390:intron 50.0%
CCTTGTTAACTCGTGGTCAC+GGG + chr8_4:1356112-1356131 Msa1306390:intron 50.0%
CTTAGAGTCAGGGGAATGGA+AGG + chr8_4:1356236-1356255 Msa1306390:intron 50.0%
GGTGGGTACACATGGCATTA+CGG - chr8_4:1356747-1356766 None:intergenic 50.0%
!! GTGGTATTGGTGGGTACACA+TGG - chr8_4:1356755-1356774 None:intergenic 50.0%
GATGCATCCTGCCATGTATG+AGG + chr8_4:1357645-1357664 Msa1306390:CDS 50.0%
TTCAGTGACGACGTCTGGTT+TGG - chr8_4:1357842-1357861 None:intergenic 50.0%
! CCTTTTCCAAGCGGAAGTTC+CGG + chr8_4:1357996-1358015 Msa1306390:CDS 50.0%
AGAACCAGCTAGAAGAGGAG+TGG + chr8_4:1358746-1358765 Msa1306390:three_prime_UTR 50.0%
TCAACCACTCCTCTTCTAGC+TGG - chr8_4:1358753-1358772 None:intergenic 50.0%
! AAGAGGAGTGGTTGATGCGT+TGG + chr8_4:1358758-1358777 Msa1306390:three_prime_UTR 50.0%
GTCTATTGGGTGCTCCTTGA+AGG + chr8_4:1358878-1358897 Msa1306390:three_prime_UTR 50.0%
ATAAAAGTTGAGGAGGGGGG+GGG - chr8_4:1358940-1358959 None:intergenic 50.0%
GATAAAAGTTGAGGAGGGGG+GGG - chr8_4:1358941-1358960 None:intergenic 50.0%
GGATAAAAGTTGAGGAGGGG+GGG - chr8_4:1358942-1358961 None:intergenic 50.0%
GGGATAAAAGTTGAGGAGGG+GGG - chr8_4:1358943-1358962 None:intergenic 50.0%
GAAGCAGCCCGAGAGAAGAT+AGG + chr8_4:1353449-1353468 Msa1306390:intron 55.0%
!! GTGACGGTGTTGGTACTAGC+TGG - chr8_4:1353608-1353627 None:intergenic 55.0%
! AGGCATTGTGAGGCCAATGC+CGG + chr8_4:1354142-1354161 Msa1306390:CDS 55.0%
TATGAGACCGGAGGGACTAC+AGG + chr8_4:1355274-1355293 Msa1306390:intron 55.0%
ACCGGAGGGACTACAGGAAT+TGG + chr8_4:1355280-1355299 Msa1306390:intron 55.0%
GGCGCAACCTTGAAATGGAC+AGG + chr8_4:1355665-1355684 Msa1306390:intron 55.0%
GCCCAACTAAAACGGCTGTC+AGG + chr8_4:1355691-1355710 Msa1306390:intron 55.0%
CCCGTGACCACGAGTTAACA+AGG - chr8_4:1356115-1356134 None:intergenic 55.0%
TGCAACGTCTAGGGGAAGAG+TGG + chr8_4:1357254-1357273 Msa1306390:intron 55.0%
CCGGAACTTCCGCTTGGAAA+AGG - chr8_4:1357999-1358018 None:intergenic 55.0%
TCCAAGCGGAAGTTCCGGAA+TGG + chr8_4:1358001-1358020 Msa1306390:CDS 55.0%
TCCATTCCGGAACTTCCGCT+TGG - chr8_4:1358005-1358024 None:intergenic 55.0%
CTTGTTGGGAGAGGAAGACG+AGG + chr8_4:1358114-1358133 Msa1306390:CDS 55.0%
CGCTAACTGTGCACCCTTCA+AGG - chr8_4:1358895-1358914 None:intergenic 55.0%
TAAAAGTTGAGGAGGGGGGG+GGG - chr8_4:1358939-1358958 None:intergenic 55.0%
AGGCCAATGCCGGTGATGCT+CGG + chr8_4:1354152-1354171 Msa1306390:CDS 60.0%
TCTCCGAGCATCACCGGCAT+TGG - chr8_4:1354158-1354177 None:intergenic 60.0%
ATGCCGGTGATGCTCGGAGA+TGG + chr8_4:1354158-1354177 Msa1306390:CDS 60.0%
GGACCATCTCCGAGCATCAC+CGG - chr8_4:1354164-1354183 None:intergenic 60.0%
CTGCGGGCGCAACCTTGAAA+TGG + chr8_4:1355660-1355679 Msa1306390:intron 60.0%
GGGCGACCCTGTCCATTTCA+AGG - chr8_4:1355675-1355694 None:intergenic 60.0%
GCGGAAGTTCCGGAATGGAC+TGG + chr8_4:1358006-1358025 Msa1306390:CDS 60.0%
AAAAGTTGAGGAGGGGGGGG+GGG - chr8_4:1358938-1358957 None:intergenic 60.0%
AAAGTTGAGGAGGGGGGGGG+GGG - chr8_4:1358937-1358956 None:intergenic 65.0%
AAGTTGAGGAGGGGGGGGGG+GGG - chr8_4:1358936-1358955 None:intergenic 70.0%
AGTTGAGGAGGGGGGGGGGG+GGG - chr8_4:1358935-1358954 None:intergenic 75.0%
! TTGAGGAGGGGGGGGGGGGG+GGG - chr8_4:1358933-1358952 None:intergenic 80.0%
! GTTGAGGAGGGGGGGGGGGG+GGG - chr8_4:1358934-1358953 None:intergenic 80.0%
! TGAGGAGGGGGGGGGGGGGG+GGG - chr8_4:1358932-1358951 None:intergenic 85.0%
! AGGAGGGGGGGGGGGGGGGG+GGG - chr8_4:1358930-1358949 None:intergenic 90.0%
! GAGGAGGGGGGGGGGGGGGG+GGG - chr8_4:1358931-1358950 None:intergenic 90.0%
! GAGGGGGGGGGGGGGGGGGG+GGG - chr8_4:1358928-1358947 None:intergenic 95.0%
! GGAGGGGGGGGGGGGGGGGG+GGG - chr8_4:1358929-1358948 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 1353396 1359130 1353396 ID=Msa1306390;Name=Msa1306390
chr8_4 mRNA 1353396 1359130 1353396 ID=Msa1306390-mRNA-1;Parent=Msa1306390;Name=Msa1306390-mRNA-1;_AED=0.04;_eAED=0.04;_QI=447|1|1|1|0.25|0.2|5|406|628
chr8_4 exon 1353396 1353442 1353396 ID=Msa1306390-mRNA-1:exon:263;Parent=Msa1306390-mRNA-1
chr8_4 exon 1353590 1354916 1353590 ID=Msa1306390-mRNA-1:exon:264;Parent=Msa1306390-mRNA-1
chr8_4 exon 1357637 1358624 1357637 ID=Msa1306390-mRNA-1:exon:265;Parent=Msa1306390-mRNA-1
chr8_4 exon 1358731 1358930 1358731 ID=Msa1306390-mRNA-1:exon:266;Parent=Msa1306390-mRNA-1
chr8_4 exon 1358953 1359130 1358953 ID=Msa1306390-mRNA-1:exon:267;Parent=Msa1306390-mRNA-1
chr8_4 five_prime_UTR 1353396 1353442 1353396 ID=Msa1306390-mRNA-1:five_prime_utr;Parent=Msa1306390-mRNA-1
chr8_4 five_prime_UTR 1353590 1353989 1353590 ID=Msa1306390-mRNA-1:five_prime_utr;Parent=Msa1306390-mRNA-1
chr8_4 CDS 1353990 1354916 1353990 ID=Msa1306390-mRNA-1:cds;Parent=Msa1306390-mRNA-1
chr8_4 CDS 1357637 1358596 1357637 ID=Msa1306390-mRNA-1:cds;Parent=Msa1306390-mRNA-1
chr8_4 three_prime_UTR 1358597 1358624 1358597 ID=Msa1306390-mRNA-1:three_prime_utr;Parent=Msa1306390-mRNA-1
chr8_4 three_prime_UTR 1358731 1358930 1358731 ID=Msa1306390-mRNA-1:three_prime_utr;Parent=Msa1306390-mRNA-1
chr8_4 three_prime_UTR 1358953 1359130 1358953 ID=Msa1306390-mRNA-1:three_prime_utr;Parent=Msa1306390-mRNA-1
Gene Sequence

>Msa1306390

ATGGCAAACGGGTCTTTCCTTGATCGTCTAGACGCTGAATTTCATGGAAACGGCGGTTGTATTGTTGAGTATCGGGCTGATCGTGACAAAGGTAAACAGAAATCTTTGTTTTGTCAAATTTTTTCGGTTTACCTAAAGGAGAATTGTAGTAGAGGCATTGTGAGGCCAATGCCGGTGATGCTCGGAGATGGTCCGTTGCTTGATTTATATCAACTGTTCTTCCTTGTGAAGGAAAAAGGTGGGTATGATGCGGTATCGAGAAAAGGGTTGTGGGATTCTGTGATAATTGAAATGGGTTTTAACCTTCATGTTTTGGCATCCGTGAAATTAGTTTATGAAAAATATCTGAGTGATTTTGAAGGTTGGCTCAGCAAAACATTCGAAGAGAGGAGTTTGAAAAATGGGAATCATGGGTATTTGAATTCATTGCCGATAGATCTAGAAAAAGAATTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAACGATGATGATTTTGTCCCGTTAGAATCAAGTAACATCATAAAGCGCATTGAATTTGTTAACCACAAGAGTGATGGTTATTTATTGGACACTAATTACCAAAATAACAAATGGGAGGGTGTCCAAAATGTTGACGGTGATGATATTGATGATGACGAAAAATTCGGCAATGGTGTTGAGGATTATCTAGCTGCCTCTTGTGTGGAAATCTCTGAGAAGGAATATAATTCTCGCAAACGTAAACGGGAATCGATATCAGGAATGGTGAACTGGACACGGCATATTGCAAAACATCCGTTTGATCCTGTAGCTCCACCATTACCAGAACCATCAAGGTGGAAGGAGTATAAAGGAGGCCAGGACTTTTTTGTTCAGTTGCTGAGGGCAAGGGATGTTCTGTCTGTGAGAAAGCAGGCTGAACCAAATGGTGGATCATCTTCCCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCATGTTGCTCTTAGTCACCAAGGTACAGTGAAATTGAGATATAGTGAAAGGCTTCCTGTCTCTGTTAAATCTCGCTGTCTTTGCTGCAATTCATGTTCTGGTAAGGGAAATAAATTGCACGGTTCAGTCAATATGGAGTCAGAAATATGTCCTCTGGAGAAAACAACAGCCAAACCAGACGTCGTCACTGAAAAGAAAAAATCAACTGCCAAACCAGATGCAACTGAGAAGAGAAAATCAACTGCCAACCCAGATATTACTGAAAAGAGAAAATCTGAGCCATCTATGGATGATGATTTTCGTGAAAAGCTTGTTTCTGTAGGTCACCTTTTCCAAGCGGAAGTTCCGGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGATTCAAAACCTACTACCGAAACAGATCTTGTTGGGAGAGGAAGACGAGGAAAGTGTAGCTGCAACGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGAGAACAGGATGAAGCTGAAGCTTGAATTGCATTCCGTGTTTTATCATTGGGGATTTGATAAAATGGGTGAGGAAGTTTCACTTCGATGGACAGCTGATGAAGAAAAGAGATTTAAGGATGCAATGAGGTTAAAATTCCCCTCCCAAAACAAGTCTTTTTGGAACAATCCATCCAGATACTTTCGAAACAAGGCAAGAAAAGACATGGTGAGCTATTACTTCAATGTATATCTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCGAAGACTGTTGACAGCGATGATGACGAAGTTGAATTTGGATCTTTTGGTGATGGTTTTGGGAGGGAAGCTATCAAGCATCCATATATGGATTGCTTGGAGTGTTCAGAGAACAAGCAATGCTTTGACTTTGAGTAG
Protein sequence

>Msa1306390

MANGSFLDRLDAEFHGNGGCIVEYRADRDKGKQKSLFCQIFSVYLKENCSRGIVRPMPVMLGDGPLLDLYQLFFLVKEKGGYDAVSRKGLWDSVIIEMGFNLHVLASVKLVYEKYLSDFEGWLSKTFEERSLKNGNHGYLNSLPIDLEKEFRSLLCSNLKDNDDDFVPLESSNIIKRIEFVNHKSDGYLLDTNYQNNKWEGVQNVDGDDIDDDEKFGNGVEDYLAASCVEISEKEYNSRKRKRESISGMVNWTRHIAKHPFDPVAPPLPEPSRWKEYKGGQDFFVQLLRARDVLSVRKQAEPNGGSSSQKVKMHPAMYEDHVALSHQGTVKLRYSERLPVSVKSRCLCCNSCSGKGNKLHGSVNMESEICPLEKTTAKPDVVTEKKKSTAKPDATEKRKSTANPDITEKRKSEPSMDDDFREKLVSVGHLFQAEVPEWTGVVSESDSKWLGTQVWPVKDDSKPTTETDLVGRGRRGKCSCNVQGSVDCVRFHIAENRMKLKLELHSVFYHWGFDKMGEEVSLRWTADEEKRFKDAMRLKFPSQNKSFWNNPSRYFRNKARKDMVSYYFNVYLIQLRSYQNRVTPKTVDSDDDEVEFGSFGDGFGREAIKHPYMDCLECSENKQCFDFE*