AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389310 MtrunA17_Chr4g0042381 97.143 105 3 0 136 240 668 772 1.42e-64 214
Msa0389310 MtrunA17_Chr4g0042381 61.871 139 8 1 1 139 378 471 6.15e-37 137
Msa0389310 MtrunA17_Chr4g0042391 93.333 105 7 0 136 240 668 772 2.33e-54 186
Msa0389310 MtrunA17_Chr4g0042391 58.273 139 13 1 1 139 378 471 3.30e-42 152
Msa0389310 MtrunA17_Chr4g0042351 87.619 105 13 0 136 240 668 772 2.47e-50 175
Msa0389310 MtrunA17_Chr4g0042351 59.603 151 12 2 1 151 378 479 5.13e-36 134
Msa0389310 MtrunA17_Chr4g0042341 51.020 147 61 1 2 137 393 539 1.24e-38 142
Msa0389310 MtrunA17_Chr4g0042341 55.882 102 40 2 139 240 741 837 4.94e-31 120
Msa0389310 MtrunA17_Chr4g0042361 52.174 138 57 2 2 137 425 555 2.69e-36 135
Msa0389310 MtrunA17_Chr4g0042361 56.863 102 42 2 139 240 757 856 4.83e-31 120
Msa0389310 MtrunA17_Chr4g0042431 57.843 102 43 0 139 240 49 150 3.03e-35 122
Msa0389310 MtrunA17_Chr4g0042441 58.571 140 46 4 1 137 385 515 2.44e-33 127
Msa0389310 MtrunA17_Chr4g0042441 51.887 106 50 1 136 240 715 820 3.85e-27 109
Msa0389310 MtrunA17_Chr4g0042401 56.028 141 52 4 1 137 386 520 2.23e-32 124
Msa0389310 MtrunA17_Chr4g0042401 52.679 112 52 1 130 240 712 823 2.26e-28 112
Msa0389310 MtrunA17_Chr8g0361281 44.521 146 68 4 2 137 387 529 4.01e-32 123
Msa0389310 MtrunA17_Chr8g0361281 48.889 90 44 2 139 227 731 819 9.08e-19 85.1
Msa0389310 MtrunA17_Chr4g0042421 55.000 140 55 3 1 137 386 520 3.69e-30 117
Msa0389310 MtrunA17_Chr2g0280711 43.038 158 67 4 2 137 390 546 5.40e-30 117
Msa0389310 MtrunA17_Chr2g0280711 50.476 105 49 2 139 240 748 852 2.53e-24 101
Msa0389310 MtrunA17_Chr3g0078541 43.262 141 74 3 1 137 407 545 7.06e-28 111
Msa0389310 MtrunA17_Chr3g0078541 47.059 102 50 3 139 240 748 845 5.90e-19 85.5
Msa0389310 MtrunA17_Chr6g0453571 41.304 138 77 2 1 137 222 356 9.25e-28 109
Msa0389310 MtrunA17_Chr8g0361441 50.980 102 49 1 139 240 724 824 3.24e-27 109
Msa0389310 MtrunA17_Chr8g0361441 54.286 140 55 4 2 137 388 522 9.30e-26 105
Msa0389310 MtrunA17_Chr3g0092301 49.020 102 50 2 139 240 148 247 6.55e-27 103
Msa0389310 MtrunA17_Chr8g0361341 50.000 102 43 2 139 240 56 149 1.10e-26 100
Msa0389310 MtrunA17_Chr3g0093161 40.845 142 69 5 2 137 381 513 4.93e-26 106
Msa0389310 MtrunA17_Chr3g0093161 48.039 102 52 1 139 240 715 815 6.49e-24 100
Msa0389310 MtrunA17_Chr8g0361251 38.732 142 78 3 2 137 384 522 1.09e-25 105
Msa0389310 MtrunA17_Chr8g0361251 50.000 102 43 2 139 240 724 817 3.27e-24 100
Msa0389310 MtrunA17_Chr2g0280701 49.020 102 49 2 139 240 718 816 3.40e-25 103
Msa0389310 MtrunA17_Chr2g0280701 36.879 141 77 3 2 137 383 516 1.61e-22 95.9
Msa0389310 MtrunA17_Chr2g0318811 38.621 145 73 4 2 137 379 516 6.70e-25 102
Msa0389310 MtrunA17_Chr2g0318811 38.462 104 57 3 139 240 717 815 3.05e-16 77.8
Msa0389310 MtrunA17_Chr3g0078551 43.750 144 73 5 1 137 397 539 7.15e-25 102
Msa0389310 MtrunA17_Chr3g0078551 44.118 102 56 1 139 240 742 842 2.91e-20 89.4
Msa0389310 MtrunA17_Chr3g0078521 40.000 140 80 2 1 137 396 534 8.39e-25 102
Msa0389310 MtrunA17_Chr3g0078521 45.098 102 52 3 139 240 737 834 8.98e-17 79.3
Msa0389310 MtrunA17_Chr5g0428111 43.796 137 69 3 2 137 390 519 2.32e-24 101
Msa0389310 MtrunA17_Chr5g0428111 44.762 105 56 2 136 240 718 820 2.13e-18 84.0
Msa0389310 MtrunA17_Chr3g0078531 42.446 139 74 3 1 137 408 542 2.47e-24 101
Msa0389310 MtrunA17_Chr3g0078531 47.059 102 50 3 139 240 745 842 2.90e-19 86.7
Msa0389310 MtrunA17_Chr4g0048631 36.875 160 76 4 2 137 390 548 2.58e-24 101
Msa0389310 MtrunA17_Chr4g0048631 51.685 89 43 0 139 227 750 838 2.06e-23 98.6
Msa0389310 MtrunA17_Chr2g0318831 41.259 143 71 5 2 137 382 518 3.99e-24 100
Msa0389310 MtrunA17_Chr2g0318831 41.346 104 54 3 139 240 719 817 1.49e-16 78.6
Msa0389310 MtrunA17_Chr8g0357961 45.545 101 54 1 139 239 702 801 5.23e-23 97.4
Msa0389310 MtrunA17_Chr8g0357991 45.545 101 54 1 139 239 703 802 6.70e-23 97.1
Msa0389310 MtrunA17_Chr8g0361261 36.691 139 85 2 2 137 415 553 8.53e-23 96.7
Msa0389310 MtrunA17_Chr8g0361261 39.216 102 54 2 139 240 755 848 3.83e-16 77.4
Msa0389310 MtrunA17_Chr8g0361301 35.971 139 86 1 2 137 384 522 1.18e-22 96.3
Msa0389310 MtrunA17_Chr8g0361301 38.235 102 55 2 139 240 724 817 9.20e-16 76.3
Msa0389310 MtrunA17_Chr8g0357781 43.137 102 57 1 139 240 49 149 1.83e-22 90.1
Msa0389310 MtrunA17_Chr8g0358061 45.455 88 48 0 139 226 274 361 1.93e-22 94.4
Msa0389310 MtrunA17_Chr8g0357981 44.118 102 56 1 139 240 523 623 2.57e-22 95.1
Msa0389310 MtrunA17_Chr6g0453561 41.748 103 59 1 139 240 85 187 3.79e-22 90.1
Msa0389310 MtrunA17_Chr5g0422921 36.552 145 71 5 2 137 382 514 9.14e-22 93.6
Msa0389310 MtrunA17_Chr5g0422921 47.619 105 54 1 136 240 713 816 2.15e-21 92.8
Msa0389310 MtrunA17_Chr3g0084491 37.681 138 70 5 2 137 399 522 1.02e-21 93.6
Msa0389310 MtrunA17_Chr3g0084491 46.602 103 51 4 139 240 724 823 2.39e-18 84.0
Msa0389310 MtrunA17_Chr8g0357881 44.554 101 55 1 139 239 694 793 1.14e-21 93.6
Msa0389310 MtrunA17_Chr5g0428101 40.714 140 72 5 2 139 389 519 1.50e-21 93.2
Msa0389310 MtrunA17_Chr5g0428101 46.512 86 45 1 136 221 716 800 7.74e-20 88.2
Msa0389310 MtrunA17_Chr3g0084431 35.036 137 81 3 2 137 381 510 1.73e-21 92.8
Msa0389310 MtrunA17_Chr3g0084431 51.429 70 33 1 139 208 712 780 6.60e-16 76.6
Msa0389310 MtrunA17_Chr8g0354331 43.689 103 56 2 139 240 318 419 3.05e-21 91.7
Msa0389310 MtrunA17_Chr5g0394011 46.154 91 40 3 131 212 554 644 3.39e-21 92.0
Msa0389310 MtrunA17_Chr1g0206351 53.425 73 34 0 136 208 568 640 3.54e-21 92.0
Msa0389310 MtrunA17_Chr3g0081011 39.286 112 66 2 130 240 548 658 3.67e-21 92.0
Msa0389310 MtrunA17_Chr3g0084621 38.129 139 77 3 2 137 387 519 8.49e-21 90.9
Msa0389310 MtrunA17_Chr3g0081071 39.130 115 68 1 128 240 136 250 9.30e-21 87.8
Msa0389310 MtrunA17_Chr2g0318841 35.664 143 81 3 2 137 379 517 1.14e-20 90.5
Msa0389310 MtrunA17_Chr2g0318841 41.346 104 54 3 139 240 718 816 1.53e-15 75.5
Msa0389310 MtrunA17_Chr8g0358121 45.349 86 47 0 139 224 680 765 1.29e-20 90.5
Msa0389310 MtrunA17_Chr8g0358141 41.837 98 56 1 139 236 296 392 1.38e-20 89.4
Msa0389310 MtrunA17_Chr3g0084451 35.135 148 75 5 2 137 384 522 1.47e-20 90.1
Msa0389310 MtrunA17_Chr3g0084451 44.660 103 53 3 139 240 724 823 6.08e-17 79.7
Msa0389310 MtrunA17_Chr8g0358031 43.023 86 49 0 139 224 697 782 1.79e-20 90.1
Msa0389310 MtrunA17_Chr8g0358081 41.837 98 56 1 139 236 679 775 2.09e-20 89.7
Msa0389310 MtrunA17_Chr3g0084441 36.054 147 69 4 2 137 390 522 3.56e-20 89.0
Msa0389310 MtrunA17_Chr3g0084441 46.602 103 51 4 139 240 724 823 4.59e-18 82.8
Msa0389310 MtrunA17_Chr3g0098791 37.063 143 73 3 2 137 386 518 3.81e-20 89.0
Msa0389310 MtrunA17_Chr2g0280691 47.619 84 44 0 139 222 743 826 4.29e-20 89.0
Msa0389310 MtrunA17_Chr2g0280691 33.125 160 83 2 2 137 383 542 1.05e-18 84.7
Msa0389310 MtrunA17_Chr8g0358071 41.837 98 56 1 139 236 694 790 5.37e-20 88.6
Msa0389310 MtrunA17_Chr2g0280681 34.058 138 86 2 1 137 384 517 6.48e-20 88.6
Msa0389310 MtrunA17_Chr2g0280681 38.384 99 60 1 139 236 719 817 6.20e-19 85.5
Msa0389310 MtrunA17_Chr8g0358101 41.837 98 56 1 139 236 682 778 1.15e-19 87.8
Msa0389310 MtrunA17_Chr8g0354291 46.154 104 50 3 140 240 4 104 1.24e-19 80.9
Msa0389310 MtrunA17_Chr3g0084421 34.028 144 80 3 2 139 346 480 2.61e-19 86.7
Msa0389310 MtrunA17_Chr3g0084421 43.396 106 54 3 139 240 680 783 7.14e-18 82.4
Msa0389310 MtrunA17_Chr4g0023221 41.176 102 58 1 139 240 948 1047 3.21e-19 86.3
Msa0389310 MtrunA17_Chr8g0354391 38.835 103 62 1 139 240 152 254 4.92e-19 83.2
Msa0389310 MtrunA17_Chr3g0081001 33.628 113 75 0 128 240 550 662 6.11e-19 85.5
Msa0389310 MtrunA17_Chr8g0357921 39.080 87 53 0 139 225 49 135 6.61e-19 80.5
Msa0389310 MtrunA17_Chr3g0082941 40.698 86 51 0 128 213 380 465 1.19e-18 84.3
Msa0389310 MtrunA17_Chr3g0084411 35.211 142 76 4 2 137 384 515 1.39e-18 84.3
Msa0389310 MtrunA17_Chr3g0084411 42.453 106 55 3 139 240 717 820 6.51e-18 82.4
Msa0389310 MtrunA17_Chr8g0354431 44.660 103 55 2 139 240 560 661 2.39e-18 83.6
Msa0389310 MtrunA17_Chr8g0354281 45.349 86 47 0 140 225 554 639 2.57e-18 83.6
Msa0389310 MtrunA17_Chr3g0084691 31.875 160 84 4 2 137 385 543 2.90e-18 83.6
Msa0389310 MtrunA17_Chr3g0084691 47.115 104 46 5 139 240 740 836 6.24e-18 82.4
Msa0389310 MtrunA17_Chr8g0354351 43.689 103 56 2 139 240 551 652 2.93e-18 83.6
Msa0389310 MtrunA17_Chr8g0340051 35.714 112 71 1 130 240 238 349 3.68e-18 82.0
Msa0389310 MtrunA17_Chr8g0340081 36.036 111 71 0 130 240 716 826 3.91e-18 83.2
Msa0389310 MtrunA17_Chr8g0340081 31.008 129 79 3 14 137 399 522 8.16e-12 64.7
Msa0389310 MtrunA17_Chr8g0354441 41.748 103 58 2 139 240 568 669 4.75e-18 82.8
Msa0389310 MtrunA17_Chr8g0340091 39.252 107 62 2 136 240 747 852 4.90e-18 82.8
Msa0389310 MtrunA17_Chr8g0340091 33.083 133 68 5 15 137 426 547 2.89e-14 72.0
Msa0389310 MtrunA17_Chr8g0354421 42.718 103 57 2 139 240 581 682 8.85e-18 82.0
Msa0389310 MtrunA17_Chr2g0280791 37.255 102 62 1 139 240 738 837 1.22e-17 81.6
Msa0389310 MtrunA17_Chr2g0280791 34.483 145 71 3 12 137 398 537 9.52e-16 76.3
Msa0389310 MtrunA17_Chr2g0280801 37.255 102 62 1 139 240 744 843 1.30e-17 81.6
Msa0389310 MtrunA17_Chr2g0280801 33.562 146 71 3 12 137 404 543 1.02e-13 70.1
Msa0389310 MtrunA17_Chr4g0048791 33.103 145 86 3 2 137 406 548 2.40e-17 80.9
Msa0389310 MtrunA17_Chr4g0048791 34.247 146 89 3 95 240 709 847 1.74e-14 72.4
Msa0389310 MtrunA17_Chr3g0081101 33.108 148 94 2 95 240 15 159 2.75e-17 76.3
Msa0389310 MtrunA17_Chr2g0280781 36.496 137 71 4 12 137 395 526 2.80e-17 80.5
Msa0389310 MtrunA17_Chr2g0280781 32.500 120 79 1 112 231 703 820 1.11e-14 73.2
Msa0389310 MtrunA17_Chr8g0361431 34.307 137 81 3 2 137 372 500 2.86e-17 80.5
Msa0389310 MtrunA17_Chr8g0361431 45.714 70 37 1 139 208 702 770 5.01e-16 77.0
Msa0389310 MtrunA17_Chr2g0280831 37.000 100 61 1 140 239 313 410 3.07e-17 80.1
Msa0389310 MtrunA17_Chr3g0084631 42.157 102 52 3 139 240 81 175 3.56e-17 76.6
Msa0389310 MtrunA17_Chr7g0236531 37.255 102 64 0 139 240 256 357 4.84e-17 79.0
Msa0389310 MtrunA17_Chr8g0354271 45.783 83 44 1 128 209 542 624 4.84e-17 79.7
Msa0389310 MtrunA17_Chr7g0236341 34.132 167 64 5 2 137 383 534 5.04e-17 80.1
Msa0389310 MtrunA17_Chr7g0236341 45.333 75 41 0 138 212 734 808 2.73e-15 74.7
Msa0389310 MtrunA17_Chr7g0236231 38.835 103 63 0 138 240 735 837 5.29e-17 79.7
Msa0389310 MtrunA17_Chr7g0236231 33.784 148 64 5 11 137 400 534 1.05e-14 73.2
Msa0389310 MtrunA17_Chr4g0048761 29.861 144 93 1 2 137 407 550 5.46e-17 79.7
Msa0389310 MtrunA17_Chr8g0340071 34.234 111 73 0 130 240 712 822 1.17e-16 79.0
Msa0389310 MtrunA17_Chr8g0340071 34.109 129 72 3 14 137 398 518 1.49e-15 75.5
Msa0389310 MtrunA17_Chr3g0084661 43.820 89 49 1 139 227 251 338 1.29e-16 77.8
Msa0389310 MtrunA17_Chr3g0081031 33.333 129 84 1 112 240 545 671 1.59e-16 78.6
Msa0389310 MtrunA17_Chr3g0098781 41.176 102 58 2 139 240 129 228 1.66e-16 75.9
Msa0389310 MtrunA17_Chr1g0205771 45.333 75 40 1 139 212 561 635 2.02e-16 78.2
Msa0389310 MtrunA17_Chr2g0280761 31.507 146 95 3 95 240 8 148 2.21e-16 73.6
Msa0389310 MtrunA17_Chr4g0048801 36.634 101 63 1 140 240 737 836 3.78e-16 77.4
Msa0389310 MtrunA17_Chr4g0048801 32.353 136 81 3 13 137 399 534 9.32e-14 70.5
Msa0389310 MtrunA17_Chr4g0048681 31.507 146 88 3 2 137 157 300 5.17e-16 77.0
Msa0389310 MtrunA17_Chr4g0048681 35.088 114 70 2 95 208 457 566 4.57e-13 68.2
Msa0389310 MtrunA17_Chr1g0154371 45.070 71 38 1 138 208 573 642 5.30e-16 77.0
Msa0389310 MtrunA17_Chr4g0055011 40.594 101 57 1 138 238 288 385 5.45e-16 76.3
Msa0389310 MtrunA17_Chr7g0236121 33.588 131 73 3 11 137 400 520 7.97e-16 76.3
Msa0389310 MtrunA17_Chr7g0236121 39.773 88 53 0 138 225 720 807 7.80e-15 73.6
Msa0389310 MtrunA17_Chr1g0206221 38.462 104 62 1 139 240 43 146 8.30e-16 72.0
Msa0389310 MtrunA17_Chr7g0236571 34.234 111 73 0 130 240 544 654 1.16e-15 75.9
Msa0389310 MtrunA17_Chr5g0428581 45.000 80 43 1 129 208 252 330 1.35e-15 75.1
Msa0389310 MtrunA17_Chr8g0357691 43.836 73 41 0 139 211 696 768 1.47e-15 75.5
Msa0389310 MtrunA17_Chr4g0048781 33.562 146 92 3 95 240 165 305 1.55e-15 74.3
Msa0389310 MtrunA17_Chr4g0048641 33.562 146 92 3 95 240 635 775 1.76e-15 75.5
Msa0389310 MtrunA17_Chr4g0023111 39.286 84 51 0 139 222 932 1015 1.91e-15 75.5
Msa0389310 MtrunA17_Chr7g0236641 37.864 103 64 0 138 240 742 844 1.97e-15 75.1
Msa0389310 MtrunA17_Chr7g0236641 32.934 167 69 5 1 137 388 541 1.29e-12 67.0
Msa0389310 MtrunA17_Chr8g0357631 37.113 97 61 0 139 235 686 782 2.14e-15 75.1
Msa0389310 MtrunA17_Chr1g0206361 47.059 68 36 0 139 206 561 628 2.19e-15 75.1
Msa0389310 MtrunA17_Chr4g0048741 31.944 144 88 3 2 137 407 548 2.43e-15 75.1
Msa0389310 MtrunA17_Chr4g0048741 30.405 148 94 4 95 240 709 849 4.01e-11 62.4
Msa0389310 MtrunA17_Chr7g0236161 38.318 107 61 2 122 225 650 754 2.64e-15 74.7
Msa0389310 MtrunA17_Chr8g0340111 36.937 111 70 0 130 240 714 824 2.65e-15 74.7
Msa0389310 MtrunA17_Chr8g0340111 32.353 136 62 5 15 137 402 520 6.41e-13 67.8
Msa0389310 MtrunA17_Chr7g0236691 37.671 146 64 4 2 137 388 516 2.91e-15 74.7
Msa0389310 MtrunA17_Chr7g0236691 34.951 103 67 0 138 240 717 819 6.18e-15 73.9
Msa0389310 MtrunA17_Chr7g0236511 33.333 129 72 2 12 137 400 517 3.24e-15 74.7
Msa0389310 MtrunA17_Chr7g0236511 48.571 70 36 0 139 208 698 767 1.42e-14 72.8
Msa0389310 MtrunA17_Chr7g0236551 35.922 103 66 0 138 240 705 807 4.23e-15 74.3
Msa0389310 MtrunA17_Chr7g0236551 32.283 127 70 3 14 137 391 504 1.04e-11 64.3
Msa0389310 MtrunA17_Chr5g0393981 49.275 69 35 0 139 207 614 682 5.44e-15 73.9
Msa0389310 MtrunA17_Chr3g0084681 42.857 91 48 3 139 227 682 770 8.09e-15 73.6
Msa0389310 MtrunA17_Chr7g0236201 39.773 88 53 0 138 225 686 773 8.28e-15 73.6
Msa0389310 MtrunA17_Chr1g0154331 40.860 93 53 2 138 229 256 347 8.83e-15 72.8
Msa0389310 MtrunA17_Chr8g0361161 43.421 76 43 0 133 208 255 330 9.05e-15 72.8
Msa0389310 MtrunA17_Chr2g0280751 30.573 157 67 6 12 137 397 542 9.50e-15 73.2
Msa0389310 MtrunA17_Chr2g0280751 35.417 96 62 0 139 234 743 838 2.34e-14 72.0
Msa0389310 MtrunA17_Chr5g0428551 40.476 84 48 1 127 208 30 113 9.87e-15 69.7
Msa0389310 MtrunA17_Chr1g0206231 37.500 104 63 1 139 240 564 667 1.16e-14 72.8
Msa0389310 MtrunA17_Chr8g0360201 33.784 148 90 3 95 240 583 724 1.18e-14 72.8
Msa0389310 MtrunA17_Chr1g0206331 37.500 96 56 1 139 230 553 648 1.19e-14 72.8
Msa0389310 MtrunA17_Chr4g0048581 28.931 159 76 4 8 137 397 547 1.20e-14 72.8
Msa0389310 MtrunA17_Chr4g0048581 40.541 74 44 0 139 212 748 821 2.99e-13 68.9
Msa0389310 MtrunA17_Chr8g0357761 44.286 70 39 0 139 208 698 767 1.60e-14 72.4
Msa0389310 MtrunA17_Chr8g0357711 42.466 73 42 0 139 211 695 767 2.09e-14 72.4
Msa0389310 MtrunA17_Chr7g0236471 44.595 74 41 0 139 212 558 631 2.39e-14 72.0
Msa0389310 MtrunA17_Chr7g0236471 30.405 148 69 4 1 137 232 356 1.37e-11 63.9
Msa0389310 MtrunA17_Chr8g0357651 36.082 97 62 0 139 235 688 784 4.47e-14 71.2
Msa0389310 MtrunA17_Chr4g0020081 30.872 149 73 4 11 137 387 527 4.55e-14 71.2
Msa0389310 MtrunA17_Chr4g0020081 34.021 97 63 1 139 234 728 824 2.98e-12 65.9
Msa0389310 MtrunA17_Chr1g0206551 43.662 71 39 1 138 208 253 322 5.64e-14 70.5
Msa0389310 MtrunA17_Chr2g0280731 36.842 95 60 0 139 233 767 861 6.21e-14 70.9
Msa0389310 MtrunA17_Chr1g0206401 44.872 78 43 0 138 215 567 644 6.29e-14 70.9
Msa0389310 MtrunA17_Chr1g0206261 36.842 133 73 4 115 240 284 412 7.20e-14 70.1
Msa0389310 MtrunA17_Chr8g0357661 36.264 91 56 1 139 227 81 171 7.65e-14 67.4
Msa0389310 MtrunA17_Chr1g0154351 37.079 89 55 1 138 226 575 662 9.75e-14 70.1
Msa0389310 MtrunA17_Chr8g0361141 37.374 99 54 1 133 223 727 825 1.31e-13 69.7
Msa0389310 MtrunA17_Chr6g0474961 40.789 76 45 0 133 208 128 203 1.57e-13 67.8
Msa0389310 MtrunA17_Chr7g0236651 40.964 83 49 0 138 220 702 784 1.74e-13 69.3
Msa0389310 MtrunA17_Chr7g0236561 39.216 102 61 1 139 240 723 823 2.39e-13 68.9
Msa0389310 MtrunA17_Chr2g0323231 37.333 75 47 0 139 213 396 470 2.62e-13 68.9
Msa0389310 MtrunA17_Chr4g0065521 33.981 103 67 1 139 240 255 357 3.65e-13 68.2
Msa0389310 MtrunA17_Chr1g0206561 44.286 70 38 1 139 208 548 616 3.87e-13 68.6
Msa0389310 MtrunA17_Chr8g0347571 37.895 95 55 2 115 208 766 857 5.02e-13 68.2
Msa0389310 MtrunA17_Chr1g0154311 45.070 71 38 1 138 208 568 637 5.37e-13 68.2
Msa0389310 MtrunA17_Chr3g0119041 39.726 73 44 0 139 211 558 630 8.51e-13 67.4
Msa0389310 MtrunA17_Chr1g0206391 43.590 78 44 0 138 215 257 334 1.05e-12 66.6
Msa0389310 MtrunA17_Chr1g0206321 37.607 117 62 2 134 240 45 160 1.33e-12 63.9
Msa0389310 MtrunA17_Chr6g0475181 33.613 119 70 2 121 230 10 128 1.44e-12 63.2
Msa0389310 MtrunA17_Chr1g0206421 52.542 59 28 0 148 206 452 510 1.93e-12 66.2
Msa0389310 MtrunA17_Chr4g0065561 33.981 103 67 1 139 240 664 766 1.94e-12 66.2
Msa0389310 MtrunA17_Chr6g0475091 38.202 89 48 1 127 208 781 869 2.05e-12 66.2
Msa0389310 MtrunA17_Chr4g0048661 35.088 114 70 2 95 208 214 323 2.71e-12 65.5
Msa0389310 MtrunA17_Chr5g0426941 44.286 70 38 1 139 208 558 626 2.81e-12 65.9
Msa0389310 MtrunA17_Chr6g0474901 37.079 89 49 1 127 208 766 854 2.81e-12 65.9
Msa0389310 MtrunA17_Chr6g0475111 35.000 100 61 2 115 213 783 879 3.13e-12 65.9
Msa0389310 MtrunA17_Chr1g0154321 38.542 96 45 3 138 220 585 679 3.84e-12 65.5
Msa0389310 MtrunA17_Chr5g0428511 44.444 72 38 2 138 208 1 71 3.87e-12 61.2
Msa0389310 MtrunA17_Chr6g0474991 38.202 89 48 1 127 208 63 151 4.33e-12 63.2
Msa0389310 MtrunA17_Chr3g0092281 42.647 68 35 1 74 137 1 68 6.12e-12 60.5
Msa0389310 MtrunA17_Chr5g0394001 38.182 110 60 2 139 240 548 657 7.13e-12 64.7
Msa0389310 MtrunA17_Chr6g0475131 38.824 85 50 1 139 221 228 312 8.44e-12 63.9
Msa0389310 MtrunA17_Chr4g0048651 33.721 86 57 0 2 87 413 498 8.86e-12 64.3
Msa0389310 MtrunA17_Chr6g0474811 38.202 89 48 1 127 208 773 861 9.84e-12 64.3
Msa0389310 MtrunA17_Chr8g0357831 44.262 61 34 0 139 199 410 470 9.94e-12 63.9
Msa0389310 MtrunA17_Chr6g0474871 37.079 89 49 1 127 208 765 853 1.48e-11 63.9
Msa0389310 MtrunA17_Chr8g0357871 42.857 56 32 0 135 190 42 97 1.88e-11 59.7
Msa0389310 MtrunA17_Chr6g0474861 37.079 89 49 1 127 208 486 574 2.33e-11 63.2
Msa0389310 MtrunA17_Chr1g0206521 42.857 70 39 1 138 207 552 620 3.06e-11 63.2
Msa0389310 MtrunA17_Chr4g0048731 33.333 114 72 2 95 208 223 332 4.19e-11 62.0
Msa0389310 MtrunA17_Chr4g0048711 33.333 114 72 2 95 208 106 215 6.47e-11 61.6
Msa0389310 MtrunA17_Chr6g0475201 40.000 70 42 0 139 208 793 862 8.61e-11 61.6
Msa0389310 MtrunA17_Chr8g0361311 41.270 63 37 0 2 64 384 446 9.78e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389310 AT4G27290.2 38.194 144 78 3 2 137 386 526 1.13e-22 96.7
Msa0389310 AT4G27290.2 43.689 103 56 2 139 240 728 829 7.41e-13 68.2
Msa0389310 AT4G21380.2 33.750 160 74 2 2 137 390 541 2.28e-22 95.9
Msa0389310 AT4G21380.1 33.750 160 74 2 2 137 390 541 2.38e-22 95.9
Msa0389310 AT4G21380.1 50.649 77 35 1 139 212 743 819 2.10e-17 81.6
Msa0389310 AT1G11330.1 31.507 146 97 1 95 240 698 840 1.71e-21 93.6
Msa0389310 AT1G11330.1 29.371 143 72 3 12 137 407 537 1.58e-13 70.1
Msa0389310 AT1G11330.2 31.507 146 97 1 95 240 700 842 1.86e-21 93.2
Msa0389310 AT1G11330.2 29.655 145 71 3 12 137 407 539 1.55e-13 70.1
Msa0389310 AT4G23180.1 45.570 79 43 0 130 208 556 634 2.64e-21 92.8
Msa0389310 AT1G11350.1 39.216 102 62 0 139 240 729 830 7.23e-21 91.7
Msa0389310 AT1G11350.1 28.767 146 71 3 12 137 395 527 4.86e-13 68.6
Msa0389310 AT1G65790.1 42.202 109 57 2 138 240 735 843 5.60e-20 89.0
Msa0389310 AT1G65790.1 30.189 159 80 3 2 137 384 534 8.73e-13 67.8
Msa0389310 AT1G65800.2 33.333 159 75 3 2 137 388 538 1.27e-19 87.8
Msa0389310 AT1G65800.1 33.333 159 75 3 2 137 388 538 1.44e-19 87.8
Msa0389310 AT1G65800.1 45.333 75 37 1 138 208 739 813 2.37e-16 78.6
Msa0389310 AT4G23270.2 36.190 105 67 0 136 240 541 645 3.09e-19 86.7
Msa0389310 AT4G23270.1 36.190 105 67 0 136 240 541 645 3.09e-19 86.7
Msa0389310 AT4G23270.3 41.176 85 50 0 136 220 541 625 3.95e-19 86.3
Msa0389310 AT4G23150.1 49.315 73 37 0 139 211 553 625 4.09e-19 86.3
Msa0389310 AT3G45860.1 38.235 102 63 0 115 216 546 647 1.18e-18 85.1
Msa0389310 AT4G11530.1 43.617 94 52 1 115 208 547 639 2.07e-18 84.3
Msa0389310 AT4G23280.3 34.615 104 68 0 136 239 509 612 3.16e-18 83.6
Msa0389310 AT4G23280.1 34.615 104 68 0 136 239 559 662 3.22e-18 83.6
Msa0389310 AT4G23200.1 33.028 109 69 1 136 240 551 659 3.39e-18 83.6
Msa0389310 AT4G23280.2 34.615 104 68 0 136 239 557 660 3.44e-18 83.6
Msa0389310 AT4G23220.1 42.466 73 42 0 136 208 551 623 7.31e-18 82.8
Msa0389310 AT1G11300.1 39.583 96 56 1 140 233 720 815 1.78e-17 81.6
Msa0389310 AT1G11300.1 31.206 141 73 4 10 137 395 524 2.66e-13 69.3
Msa0389310 AT1G11300.2 39.583 96 56 1 140 233 705 800 1.94e-17 81.6
Msa0389310 AT4G11480.4 38.017 121 73 2 94 214 496 614 2.76e-17 80.9
Msa0389310 AT4G11480.3 38.017 121 73 2 94 214 499 617 2.90e-17 80.9
Msa0389310 AT4G11480.1 38.017 121 73 2 94 214 504 622 2.99e-17 80.9
Msa0389310 AT4G27300.1 37.500 136 75 2 2 137 390 515 3.50e-17 80.9
Msa0389310 AT4G27300.1 44.706 85 45 2 139 222 717 800 9.02e-15 73.6
Msa0389310 AT4G23230.1 43.038 79 45 0 130 208 545 623 3.95e-17 80.5
Msa0389310 AT4G03230.8 42.424 99 55 2 139 235 749 847 4.89e-17 80.5
Msa0389310 AT4G03230.8 29.814 161 88 4 2 137 387 547 1.97e-11 63.9
Msa0389310 AT4G03230.2 42.424 99 55 2 139 235 807 905 5.01e-17 80.5
Msa0389310 AT4G03230.6 42.424 99 55 2 139 235 807 905 5.01e-17 80.5
Msa0389310 AT4G03230.5 42.424 99 55 2 139 235 835 933 5.04e-17 80.5
Msa0389310 AT4G03230.7 42.424 99 55 2 139 235 750 848 5.42e-17 80.1
Msa0389310 AT4G23140.2 45.714 70 38 0 139 208 574 643 5.71e-17 80.1
Msa0389310 AT4G03230.3 42.424 99 55 2 139 235 742 840 5.73e-17 80.1
Msa0389310 AT4G23140.1 45.714 70 38 0 139 208 568 637 5.75e-17 80.1
Msa0389310 AT4G03230.4 42.424 99 55 2 139 235 907 1005 5.79e-17 80.1
Msa0389310 AT4G03230.1 42.424 99 55 2 139 235 907 1005 5.79e-17 80.1
Msa0389310 AT4G23160.1 38.298 94 54 1 140 229 577 670 6.46e-17 80.1
Msa0389310 AT1G11340.1 34.058 138 75 2 14 137 395 530 7.10e-17 79.7
Msa0389310 AT1G11340.1 36.538 104 62 3 140 240 731 833 5.55e-13 68.6
Msa0389310 AT1G11340.2 34.058 138 75 2 14 137 463 598 7.44e-17 79.7
Msa0389310 AT1G11340.3 34.058 138 75 2 14 137 463 598 7.72e-17 79.7
Msa0389310 AT4G23130.1 40.217 92 54 1 130 220 548 639 1.12e-16 79.3
Msa0389310 AT4G23130.2 40.217 92 54 1 130 220 552 643 1.15e-16 79.3
Msa0389310 AT4G00970.1 36.275 102 64 1 140 240 564 665 2.13e-16 78.6
Msa0389310 AT4G21390.1 44.444 81 44 1 139 218 745 825 2.91e-16 78.2
Msa0389310 AT4G21390.1 29.747 158 69 7 11 137 398 544 5.22e-12 65.5
Msa0389310 AT4G11490.1 40.909 88 49 1 121 208 524 608 4.55e-16 77.4
Msa0389310 AT4G23190.1 40.000 90 54 0 136 225 567 656 5.38e-16 77.4
Msa0389310 AT4G23190.3 40.000 90 54 0 136 225 489 578 5.88e-16 77.0
Msa0389310 AT4G23190.4 40.000 90 54 0 136 225 489 578 5.88e-16 77.0
Msa0389310 AT1G11410.2 31.126 151 73 4 11 137 280 423 5.91e-16 77.0
Msa0389310 AT1G11410.2 35.514 107 63 3 140 240 624 730 3.09e-14 72.0
Msa0389310 AT1G11410.1 31.126 151 73 4 11 137 395 538 6.25e-16 77.0
Msa0389310 AT1G11410.1 35.514 107 63 3 140 240 739 845 3.09e-14 72.0
Msa0389310 AT1G11410.4 31.126 151 73 4 11 137 402 545 6.45e-16 77.0
Msa0389310 AT1G11410.4 35.514 107 63 3 140 240 746 852 3.01e-14 72.0
Msa0389310 AT1G11410.3 31.126 151 73 4 11 137 371 514 6.89e-16 77.0
Msa0389310 AT1G11410.3 35.514 107 63 3 140 240 715 821 2.96e-14 72.0
Msa0389310 AT1G11303.1 35.644 101 65 0 140 240 720 820 6.95e-16 77.0
Msa0389310 AT1G11303.1 29.787 141 75 2 10 137 395 524 6.07e-13 68.2
Msa0389310 AT1G61400.1 37.209 129 69 2 12 137 396 515 7.92e-16 76.6
Msa0389310 AT1G61400.1 36.170 94 59 1 129 222 707 799 3.12e-12 66.2
Msa0389310 AT4G23300.1 42.500 80 44 1 136 213 570 649 8.20e-16 76.6
Msa0389310 AT1G61400.2 37.209 129 69 2 12 137 396 515 8.24e-16 76.6
Msa0389310 AT1G61400.2 36.170 94 59 1 129 222 715 807 3.22e-12 66.2
Msa0389310 AT1G61370.2 33.077 130 72 4 14 137 245 365 9.02e-16 76.6
Msa0389310 AT1G61370.2 37.234 94 58 1 128 221 556 648 1.02e-12 67.4
Msa0389310 AT1G61370.1 33.077 130 72 4 14 137 396 516 9.93e-16 76.6
Msa0389310 AT1G61370.1 37.234 94 58 1 128 221 707 799 1.03e-12 67.8
Msa0389310 AT1G61420.5 35.338 133 72 5 12 137 236 361 1.66e-15 75.9
Msa0389310 AT1G61420.5 33.333 105 65 2 136 240 560 659 8.40e-12 64.7
Msa0389310 AT1G61420.2 35.338 133 72 5 12 137 386 511 2.01e-15 75.5
Msa0389310 AT1G61420.2 33.333 105 65 2 136 240 710 809 7.72e-12 65.1
Msa0389310 AT1G61420.4 35.338 133 72 5 12 137 386 511 2.01e-15 75.5
Msa0389310 AT1G61420.4 33.333 105 65 2 136 240 710 809 7.72e-12 65.1
Msa0389310 AT1G61480.1 36.029 136 67 5 12 137 386 511 2.36e-15 75.5
Msa0389310 AT1G61480.1 35.714 112 67 3 129 240 703 809 5.62e-12 65.5
Msa0389310 AT1G61380.2 31.496 127 76 1 11 137 241 356 2.61e-15 75.1
Msa0389310 AT1G61380.1 31.496 127 76 1 11 137 388 503 2.85e-15 75.1
Msa0389310 AT4G04540.1 40.196 102 59 2 124 225 552 651 3.60e-15 74.7
Msa0389310 AT4G04540.4 40.196 102 59 2 124 225 523 622 4.01e-15 74.7
Msa0389310 AT1G61440.2 38.636 132 67 5 12 139 379 500 4.29e-15 74.7
Msa0389310 AT1G61440.2 34.783 92 59 1 129 220 715 805 5.81e-11 62.4
Msa0389310 AT4G23210.3 45.070 71 39 0 136 206 570 640 4.38e-15 74.7
Msa0389310 AT4G23320.2 36.893 103 62 1 136 235 398 500 4.68e-15 74.3
Msa0389310 AT4G23320.1 36.893 103 62 1 136 235 398 500 4.68e-15 74.3
Msa0389310 AT1G61420.3 34.351 131 74 5 12 137 236 359 5.50e-15 74.3
Msa0389310 AT1G61420.3 33.333 105 65 2 136 240 558 657 8.24e-12 65.1
Msa0389310 AT4G23320.3 36.893 103 62 1 136 235 419 521 5.66e-15 73.9
Msa0389310 AT1G61420.1 34.351 131 74 5 12 137 386 509 6.00e-15 74.3
Msa0389310 AT1G61420.1 33.333 105 65 2 136 240 708 807 7.64e-12 65.1
Msa0389310 AT1G61440.1 38.462 130 61 5 12 137 379 493 7.28e-15 73.9
Msa0389310 AT1G61440.1 34.783 92 59 1 129 220 685 775 6.09e-11 62.4
Msa0389310 AT4G05200.2 33.824 136 85 3 95 228 541 673 7.78e-15 73.9
Msa0389310 AT4G11470.1 35.000 120 76 2 94 213 514 631 8.05e-15 73.9
Msa0389310 AT1G61440.3 38.462 130 66 5 12 137 379 498 8.08e-15 73.9
Msa0389310 AT1G61440.3 34.783 92 59 1 129 220 690 780 5.88e-11 62.4
Msa0389310 AT4G05200.1 33.824 136 85 3 95 228 523 655 8.24e-15 73.9
Msa0389310 AT4G23310.2 34.444 90 59 0 136 225 683 772 8.38e-15 73.9
Msa0389310 AT4G11470.2 35.000 120 76 2 94 213 519 636 8.79e-15 73.6
Msa0389310 AT4G23310.1 34.444 90 59 0 136 225 723 812 9.40e-15 73.6
Msa0389310 AT1G61610.1 35.294 102 66 0 139 240 741 842 9.44e-15 73.6
Msa0389310 AT1G61610.1 29.932 147 75 5 11 137 402 540 5.41e-12 65.5
Msa0389310 AT1G61430.1 33.083 133 73 3 12 139 385 506 1.45e-14 73.2
Msa0389310 AT1G61430.1 39.362 94 54 2 129 220 699 791 3.68e-13 68.9
Msa0389310 AT4G00960.2 30.370 135 86 3 96 229 141 268 1.51e-14 71.6
Msa0389310 AT4G00960.3 30.370 135 86 3 96 229 148 275 1.75e-14 71.6
Msa0389310 AT1G61490.6 36.607 112 67 2 129 240 671 778 1.77e-14 72.8
Msa0389310 AT1G61490.6 38.168 131 65 7 12 137 360 479 6.00e-13 68.2
Msa0389310 AT1G61490.7 36.607 112 67 2 129 240 671 778 1.77e-14 72.8
Msa0389310 AT1G61490.7 38.168 131 65 7 12 137 360 479 6.00e-13 68.2
Msa0389310 AT1G61490.3 36.607 112 67 2 129 240 547 654 1.80e-14 72.8
Msa0389310 AT1G61490.3 38.168 131 65 7 12 137 236 355 5.93e-13 68.2
Msa0389310 AT1G61490.4 36.607 112 67 2 129 240 697 804 1.85e-14 72.8
Msa0389310 AT1G61490.4 38.168 131 65 7 12 137 386 505 5.93e-13 68.2
Msa0389310 AT1G61490.1 36.607 112 67 2 129 240 697 804 1.85e-14 72.8
Msa0389310 AT1G61490.1 38.168 131 65 7 12 137 386 505 5.93e-13 68.2
Msa0389310 AT1G61490.2 36.607 112 67 2 129 240 697 804 1.85e-14 72.8
Msa0389310 AT1G61490.2 38.168 131 65 7 12 137 386 505 5.93e-13 68.2
Msa0389310 AT1G61490.5 36.607 112 67 2 129 240 697 804 1.85e-14 72.8
Msa0389310 AT1G61490.5 38.168 131 65 7 12 137 386 505 5.93e-13 68.2
Msa0389310 AT1G61550.1 35.115 131 73 5 12 137 381 504 1.94e-14 72.8
Msa0389310 AT1G61550.1 41.096 73 42 1 139 211 706 777 3.63e-11 63.2
Msa0389310 AT1G61430.5 33.083 133 73 3 12 139 385 506 2.22e-14 72.4
Msa0389310 AT4G04570.1 38.835 103 61 2 124 226 547 647 2.36e-14 72.4
Msa0389310 AT1G61430.11 32.824 131 72 3 12 137 362 481 2.51e-14 72.4
Msa0389310 AT1G61430.11 39.362 94 54 2 129 220 673 765 3.75e-13 68.9
Msa0389310 AT1G61430.12 32.824 131 72 3 12 137 362 481 2.51e-14 72.4
Msa0389310 AT1G61430.12 39.362 94 54 2 129 220 673 765 3.75e-13 68.9
Msa0389310 AT1G61430.13 32.824 131 72 3 12 137 362 481 2.51e-14 72.4
Msa0389310 AT1G61430.13 39.362 94 54 2 129 220 673 765 3.75e-13 68.9
Msa0389310 AT1G61430.4 32.824 131 72 3 12 137 362 481 2.88e-14 72.0
Msa0389310 AT4G00960.1 36.957 92 53 2 139 229 275 362 2.90e-14 71.6
Msa0389310 AT1G61430.3 32.824 131 72 3 12 137 394 513 3.00e-14 72.0
Msa0389310 AT1G61430.9 32.824 131 72 3 12 137 385 504 3.08e-14 72.0
Msa0389310 AT1G61430.9 39.362 94 54 2 129 220 696 788 3.89e-13 68.9
Msa0389310 AT1G61430.2 32.824 131 72 3 12 137 385 504 3.34e-14 72.0
Msa0389310 AT1G61430.6 32.824 131 72 3 12 137 385 504 3.34e-14 72.0
Msa0389310 AT1G61430.10 32.824 131 72 3 12 137 362 481 3.48e-14 72.0
Msa0389310 AT4G23240.2 41.772 79 46 0 136 214 243 321 4.02e-14 71.2
Msa0389310 AT1G61430.8 32.824 131 72 3 12 137 385 504 4.49e-14 71.6
Msa0389310 AT1G61430.7 32.824 131 72 3 12 137 385 504 4.49e-14 71.6
Msa0389310 AT1G61360.2 32.353 136 74 4 11 137 306 432 4.92e-14 71.6
Msa0389310 AT1G61360.3 32.353 136 74 4 11 137 306 432 4.92e-14 71.6
Msa0389310 AT1G61360.4 32.353 136 74 4 11 137 306 432 4.92e-14 71.6
Msa0389310 AT1G61360.1 32.353 136 74 4 11 137 387 513 5.10e-14 71.6
Msa0389310 AT4G23240.1 41.772 79 46 0 136 214 550 628 6.93e-14 70.9
Msa0389310 AT4G21410.1 41.748 103 56 3 140 240 454 554 1.08e-13 70.5
Msa0389310 AT4G21410.3 41.748 103 56 3 140 240 579 679 1.30e-13 70.1
Msa0389310 AT1G11330.3 29.655 145 71 3 12 137 407 539 1.98e-13 69.7
Msa0389310 AT4G11460.1 39.474 76 46 0 136 211 564 639 3.29e-13 68.9
Msa0389310 AT4G11460.2 39.474 76 46 0 136 211 486 561 3.45e-13 68.9
Msa0389310 AT4G23290.2 40.506 79 47 0 136 214 578 656 3.60e-13 68.9
Msa0389310 AT4G11460.3 39.474 76 46 0 136 211 561 636 3.64e-13 68.9
Msa0389310 AT4G23290.1 40.506 79 47 0 136 214 535 613 3.66e-13 68.9
Msa0389310 AT1G11280.3 31.496 127 75 1 11 137 394 508 4.01e-13 68.9
Msa0389310 AT1G11280.4 31.496 127 75 1 11 137 404 518 4.02e-13 68.9
Msa0389310 AT4G38830.1 35.537 121 69 4 115 230 540 656 4.50e-13 68.6
Msa0389310 AT4G23250.3 38.636 88 53 1 136 223 569 655 4.96e-13 68.6
Msa0389310 AT4G23250.1 38.636 88 53 1 136 223 574 660 5.18e-13 68.6
Msa0389310 AT1G61500.2 38.824 85 49 2 136 218 687 770 5.53e-13 68.6
Msa0389310 AT1G61500.2 34.615 130 71 5 12 137 369 488 1.51e-12 67.0
Msa0389310 AT1G61500.3 38.824 85 49 2 136 218 710 793 5.56e-13 68.6
Msa0389310 AT1G61500.3 34.615 130 71 5 12 137 392 511 1.65e-12 67.0
Msa0389310 AT4G23250.2 38.636 88 53 1 136 223 569 655 5.82e-13 68.6
Msa0389310 AT1G61500.1 38.824 85 49 2 136 218 705 788 5.82e-13 68.6
Msa0389310 AT1G61500.1 34.615 130 71 5 12 137 387 506 1.56e-12 67.0
Msa0389310 AT4G21400.8 35.433 127 80 2 115 240 447 572 6.89e-13 68.2
Msa0389310 AT1G61460.1 37.143 105 61 2 136 240 650 749 7.50e-13 68.2
Msa0389310 AT1G61460.1 34.615 130 69 5 12 137 352 469 3.23e-12 66.2
Msa0389310 AT1G65790.3 30.189 159 80 3 2 137 384 534 7.58e-13 67.8
Msa0389310 AT1G65790.2 30.189 159 80 3 2 137 384 534 7.58e-13 67.8
Msa0389310 AT4G27290.1 43.689 103 56 2 139 240 682 783 8.11e-13 67.8
Msa0389310 AT4G21400.1 35.433 127 80 2 115 240 558 683 9.60e-13 67.8
Msa0389310 AT4G21400.2 35.433 127 80 2 115 240 546 671 9.63e-13 67.8
Msa0389310 AT4G21400.7 35.433 127 80 2 115 240 548 673 9.64e-13 67.8
Msa0389310 AT1G61390.2 28.261 138 77 3 11 137 241 367 1.02e-12 67.8
Msa0389310 AT1G61390.2 26.818 220 120 7 22 240 484 663 6.07e-12 65.5
Msa0389310 AT1G61390.1 28.261 138 77 3 11 137 409 535 1.20e-12 67.4
Msa0389310 AT1G61390.1 26.818 220 120 7 22 240 652 831 5.60e-12 65.5
Msa0389310 AT1G70740.2 41.667 72 42 0 136 207 275 346 1.35e-12 67.0
Msa0389310 AT1G11280.1 32.847 137 72 6 11 137 404 530 2.18e-12 66.6
Msa0389310 AT1G11280.2 32.847 137 72 6 11 137 394 520 2.36e-12 66.6
Msa0389310 AT1G11280.5 32.847 137 72 6 11 137 394 520 2.53e-12 66.2
Msa0389310 AT1G61610.2 29.932 147 75 5 11 137 402 540 5.36e-12 65.5
Msa0389310 AT3G16030.1 34.483 116 72 3 95 208 703 816 7.45e-12 65.1
Msa0389310 AT4G21390.2 29.747 158 69 7 11 137 398 544 7.53e-12 65.1
Msa0389310 AT1G70740.1 41.667 72 40 1 138 207 275 346 8.05e-12 64.7
Msa0389310 AT3G16030.6 34.483 116 72 3 95 208 724 837 9.55e-12 64.7
Msa0389310 AT3G16030.2 34.483 116 72 3 95 208 580 693 1.11e-11 64.7
Msa0389310 AT4G04510.2 37.288 118 66 4 123 240 541 650 1.52e-11 63.9
Msa0389310 AT4G04510.1 37.288 118 66 4 123 240 539 648 1.53e-11 63.9
Msa0389310 AT1G67520.6 39.506 81 47 2 130 208 712 792 4.83e-11 62.8
Msa0389310 AT1G67520.4 35.345 116 71 4 95 208 629 742 4.98e-11 62.8
Msa0389310 AT1G67520.3 39.506 81 47 2 130 208 705 785 5.14e-11 62.8
Msa0389310 AT1G67520.8 35.345 116 71 4 95 208 464 577 5.15e-11 62.4
Msa0389310 AT1G67520.7 35.345 116 71 4 95 208 464 577 5.15e-11 62.4
Msa0389310 AT1G67520.5 35.345 116 71 4 95 208 435 548 5.83e-11 62.4
Msa0389310 AT4G23260.1 33.019 106 70 1 136 240 554 659 8.49e-11 62.0
Msa0389310 AT4G23260.2 33.019 106 70 1 136 240 543 648 8.85e-11 62.0
Msa0389310 AT4G21230.1 37.079 89 53 2 128 214 539 626 9.97e-11 61.6

Find 67 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTTAGGCATGGACATTC+TGG 0.222610 3_1:+94007928 Msa0389310:intron
TTCTCAGAGAAGAACAAAAT+TGG 0.242336 3_1:+94006882 Msa0389310:CDS
AAAATTGGAGAAGGTGGTTT+TGG 0.253032 3_1:+94006897 Msa0389310:CDS
AGGATGCCTGCTTCAGAATT+AGG 0.279027 3_1:+94006442 Msa0389310:CDS
AATTACAGTTTCTGCAGCTT+TGG 0.323802 3_1:+94006623 Msa0389310:CDS
CCCAAAGTATATGTAGTATC+TGG 0.332443 3_1:-94006250 None:intergenic
CCAGATACTACATATACTTT+GGG 0.338998 3_1:+94006250 Msa0389310:five_prime_UTR
ATCGATATCAAACTTATTCC+AGG 0.342688 3_1:+94006397 Msa0389310:CDS
ATTACAGTTTCTGCAGCTTT+GGG 0.356288 3_1:+94006624 Msa0389310:CDS
TGAGAGACACATGGACGATA+TGG 0.362993 3_1:+94006812 Msa0389310:CDS
TCCAGATACTACATATACTT+TGG 0.373370 3_1:+94006249 Msa0389310:five_prime_UTR
GTGGGCAATTTCTGTATATC+AGG 0.389973 3_1:+94006422 Msa0389310:CDS
AGTGCTCGGTGAAAATCAAT+AGG 0.393901 3_1:+94008233 Msa0389310:exon
GCTGATGTGATTCTAATGTT+AGG 0.404259 3_1:+94008080 Msa0389310:CDS
AGTGGTTGTGTTATGTGGTT+TGG 0.418186 3_1:+94006367 Msa0389310:CDS
GTAGTAAAACCTGGCTCCTT+AGG 0.420102 3_1:-94008128 None:intergenic
CAGGAAGTGGTTGTGTTATG+TGG 0.453364 3_1:+94006362 Msa0389310:CDS
AGACTCAGGAGGAGCATTGT+TGG 0.462054 3_1:+94006678 Msa0389310:CDS
ATCAAACTTATTCCAGGTGG+TGG 0.463520 3_1:+94006403 Msa0389310:CDS
AAGAACAAAATTGGAGAAGG+TGG 0.466263 3_1:+94006891 Msa0389310:CDS
TATTGGATTACCAAATATAC+AGG 0.470556 3_1:-94006921 None:intergenic
TTTGAGTCAATTATCTGTAA+AGG 0.475904 3_1:-94007963 None:intergenic
AATATAAGTGGCGCAGGAAG+TGG 0.487384 3_1:+94006349 Msa0389310:CDS
TGTATTTGTATAAGCCATGC+AGG 0.489272 3_1:-94006326 None:intergenic
TTAGATGAGCCTAAGGAGCC+AGG 0.505494 3_1:+94008119 Msa0389310:CDS
GATGATATTAGATGAGCCTA+AGG 0.510476 3_1:+94008112 Msa0389310:CDS
TATTCACCTAATTCTGAAGC+AGG 0.515246 3_1:-94006448 None:intergenic
AATAGTGACTTTGTTCCCCA+TGG 0.515436 3_1:-94008291 None:intergenic
ACCGATACATATTTCAGTAA+AGG 0.518159 3_1:+94008258 Msa0389310:three_prime_UTR
TTGTTGACAAATCAAGCAAT+GGG 0.519286 3_1:-94006839 None:intergenic
TACAGAAATTGCCCACCACC+TGG 0.522589 3_1:-94006415 None:intergenic
CTGATGTGATTCTAATGTTA+GGG 0.529522 3_1:+94008081 Msa0389310:CDS
GTAAAGGAGGTATAATTCCA+TGG 0.531438 3_1:+94008274 Msa0389310:three_prime_UTR
ATTGTTGACAAATCAAGCAA+TGG 0.539609 3_1:-94006840 None:intergenic
CTTGAATAATTGTTCCTGCA+TGG 0.543962 3_1:+94006312 Msa0389310:exon
TCCTTTACTGAAATATGTAT+CGG 0.544653 3_1:-94008259 None:intergenic
TATACAAATACAAATATAAG+TGG 0.545565 3_1:+94006337 Msa0389310:CDS
TAAAGGAGGTATAATTCCAT+GGG 0.546431 3_1:+94008275 Msa0389310:three_prime_UTR
AATACAAATATAAGTGGCGC+AGG 0.555833 3_1:+94006343 Msa0389310:CDS
GCCATGGTAGGCCTATCCTC+TGG 0.556054 3_1:-94008059 None:intergenic
GAAGCAAATTCAAGCTCAAG+TGG 0.564601 3_1:+94008167 Msa0389310:CDS
TCTTTCCTCGTAGTAAAACC+TGG 0.569552 3_1:-94008137 None:intergenic
GAGAAGAACAAAATTGGAGA+AGG 0.572502 3_1:+94006888 Msa0389310:CDS
CTAGGGAAGTCAAAGACAGA+AGG 0.574522 3_1:+94006783 Msa0389310:intron
CAGATACTACATATACTTTG+GGG 0.584659 3_1:+94006251 Msa0389310:five_prime_UTR
CTCTGAGAAATTGTCAGTAG+CGG 0.587907 3_1:-94006868 None:intergenic
GCATGGACATTCTGGAAACA+TGG 0.595714 3_1:+94007936 Msa0389310:CDS
AAATTCAAGCTCAAGTGGGA+AGG 0.598004 3_1:+94008172 Msa0389310:CDS
ATAGTATTGACGATGAGCAC+AGG 0.605378 3_1:+94006577 Msa0389310:CDS
TGCAACAATATCCAGAGGAT+AGG 0.611928 3_1:+94008048 Msa0389310:CDS
CATTAGAATCACATCAGCCA+TGG 0.617577 3_1:-94008075 None:intergenic
TCAAACTTATTCCAGGTGGT+GGG 0.621411 3_1:+94006404 Msa0389310:CDS
AGAATCACATCAGCCATGGT+AGG 0.625241 3_1:-94008071 None:intergenic
GATACATATTTCAGTAAAGG+AGG 0.635495 3_1:+94008261 Msa0389310:three_prime_UTR
AGATACTACATATACTTTGG+GGG 0.652336 3_1:+94006252 Msa0389310:five_prime_UTR
AAGCAAATTCAAGCTCAAGT+GGG 0.659163 3_1:+94008168 Msa0389310:CDS
TCCAGAGGATAGGCCTACCA+TGG 0.660800 3_1:+94008058 Msa0389310:CDS
GTATTGACGATGAGCACAGG+AGG 0.677439 3_1:+94006580 Msa0389310:CDS
GTATCGCGTTGCATCCACGT+TGG 0.682117 3_1:+94008014 Msa0389310:CDS
ATGTGTGCAACAATATCCAG+AGG 0.693017 3_1:+94008043 Msa0389310:CDS
GATAATTGACTCAAACATCG+TGG 0.694407 3_1:+94007971 Msa0389310:CDS
ATTGGTCTAGAACAATGTGG+AGG 0.702423 3_1:+94006283 Msa0389310:five_prime_UTR
AGGCAACTATGAGAGACACA+TGG 0.705863 3_1:+94006803 Msa0389310:CDS
GATATCAAACTTATTCCAGG+TGG 0.714312 3_1:+94006400 Msa0389310:CDS
AGTATTGGTCTAGAACAATG+TGG 0.719748 3_1:+94006280 Msa0389310:five_prime_UTR
AAAGGAGGTATAATTCCATG+GGG 0.743328 3_1:+94008276 Msa0389310:three_prime_UTR
GCACACATAAGAGTCCAACG+TGG 0.855010 3_1:-94008028 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACAAATACAAATATAAG+TGG + chr3_1:94006337-94006356 Msa0389310:CDS 15.0%
!! GAATATTAAAAGGAAAAAAT+TGG - chr3_1:94006488-94006507 None:intergenic 15.0%
!! AATTCTCAAAGAATATTAAA+AGG - chr3_1:94006498-94006517 None:intergenic 15.0%
!! TAATTACATTCATATAGTAA+TGG - chr3_1:94007005-94007024 None:intergenic 15.0%
!!! AAATAAACTATGATTTTAGA+TGG - chr3_1:94007601-94007620 None:intergenic 15.0%
!!! ATTTTCGTCTTTTATAATTT+AGG + chr3_1:94007914-94007933 Msa0389310:intron 15.0%
!! TATACAAATACAAATATAAG+TGG + chr3_1:94006337-94006356 Msa0389310:CDS 15.0%
!! GAATATTAAAAGGAAAAAAT+TGG - chr3_1:94006488-94006507 None:intergenic 15.0%
!! AATTCTCAAAGAATATTAAA+AGG - chr3_1:94006498-94006517 None:intergenic 15.0%
!! TAATTACATTCATATAGTAA+TGG - chr3_1:94007005-94007024 None:intergenic 15.0%
!!! AAATAAACTATGATTTTAGA+TGG - chr3_1:94007601-94007620 None:intergenic 15.0%
!!! ATTTTCGTCTTTTATAATTT+AGG + chr3_1:94007914-94007933 Msa0389310:intron 15.0%
!! TATTAAAAGGAAAAAATTGG+TGG - chr3_1:94006485-94006504 None:intergenic 20.0%
!!! ACATTTTTTCATTCAAATGT+CGG - chr3_1:94006724-94006743 None:intergenic 20.0%
!! TTTGAATGAAAAAATGTCAT+TGG + chr3_1:94006727-94006746 Msa0389310:intron 20.0%
!!! TTTTTTTCTTTCCATTTTCT+AGG + chr3_1:94006765-94006784 Msa0389310:intron 20.0%
!!! TTTTTTCTTTCCATTTTCTA+GGG + chr3_1:94006766-94006785 Msa0389310:intron 20.0%
!!! TATATTTGGTAATCCAATAT+TGG + chr3_1:94006925-94006944 Msa0389310:intron 20.0%
!! AATGTAATTAATGATTATCC+AGG + chr3_1:94007015-94007034 Msa0389310:intron 20.0%
!! ATGTAATTAATGATTATCCA+GGG + chr3_1:94007016-94007035 Msa0389310:intron 20.0%
!!! CAATAAGTTTTACAAGATTT+CGG - chr3_1:94007150-94007169 None:intergenic 20.0%
!!! AATCCAAAAATATCAGATTT+TGG + chr3_1:94007500-94007519 Msa0389310:intron 20.0%
!! TATTAAAAGGAAAAAATTGG+TGG - chr3_1:94006485-94006504 None:intergenic 20.0%
!!! ACATTTTTTCATTCAAATGT+CGG - chr3_1:94006724-94006743 None:intergenic 20.0%
!! TTTGAATGAAAAAATGTCAT+TGG + chr3_1:94006727-94006746 Msa0389310:intron 20.0%
!!! TTTTTTTCTTTCCATTTTCT+AGG + chr3_1:94006765-94006784 Msa0389310:intron 20.0%
!!! TTTTTTCTTTCCATTTTCTA+GGG + chr3_1:94006766-94006785 Msa0389310:intron 20.0%
!!! TATATTTGGTAATCCAATAT+TGG + chr3_1:94006925-94006944 Msa0389310:intron 20.0%
!! AATGTAATTAATGATTATCC+AGG + chr3_1:94007015-94007034 Msa0389310:intron 20.0%
!! ATGTAATTAATGATTATCCA+GGG + chr3_1:94007016-94007035 Msa0389310:intron 20.0%
!!! CAATAAGTTTTACAAGATTT+CGG - chr3_1:94007150-94007169 None:intergenic 20.0%
!!! AATCCAAAAATATCAGATTT+TGG + chr3_1:94007500-94007519 Msa0389310:intron 20.0%
!! TTAAGTCTTGTAATTGAAAG+TGG + chr3_1:94006517-94006536 Msa0389310:intron 25.0%
!!! AAGTTGCTTTGTTTAGATAA+AGG + chr3_1:94006549-94006568 Msa0389310:intron 25.0%
!!! TTTATTTTTTCTACAGACTC+AGG + chr3_1:94006664-94006683 Msa0389310:CDS 25.0%
! TATTGGATTACCAAATATAC+AGG - chr3_1:94006924-94006943 None:intergenic 25.0%
! TAGAAATCATACTCCAATAT+TGG - chr3_1:94006941-94006960 None:intergenic 25.0%
! CGAAATCTTGTAAAACTTAT+TGG + chr3_1:94007148-94007167 Msa0389310:intron 25.0%
!! AGTACTAGTTTATGAATACA+TGG + chr3_1:94007195-94007214 Msa0389310:intron 25.0%
!! AGTCCAAAATCTGATATTTT+TGG - chr3_1:94007506-94007525 None:intergenic 25.0%
!! AAAAATATCAGATTTTGGAC+TGG + chr3_1:94007505-94007524 Msa0389310:intron 25.0%
! TTACTGTTAGAGATTATATG+TGG + chr3_1:94007761-94007780 Msa0389310:intron 25.0%
! TACTGTTAGAGATTATATGT+GGG + chr3_1:94007762-94007781 Msa0389310:intron 25.0%
! TTTGAGTCAATTATCTGTAA+AGG - chr3_1:94007966-94007985 None:intergenic 25.0%
! TCCTTTACTGAAATATGTAT+CGG - chr3_1:94008262-94008281 None:intergenic 25.0%
!! TTAAGTCTTGTAATTGAAAG+TGG + chr3_1:94006517-94006536 Msa0389310:intron 25.0%
!!! AAGTTGCTTTGTTTAGATAA+AGG + chr3_1:94006549-94006568 Msa0389310:intron 25.0%
!!! TTTATTTTTTCTACAGACTC+AGG + chr3_1:94006664-94006683 Msa0389310:CDS 25.0%
! TATTGGATTACCAAATATAC+AGG - chr3_1:94006924-94006943 None:intergenic 25.0%
! TAGAAATCATACTCCAATAT+TGG - chr3_1:94006941-94006960 None:intergenic 25.0%
! CGAAATCTTGTAAAACTTAT+TGG + chr3_1:94007148-94007167 Msa0389310:intron 25.0%
!! AGTACTAGTTTATGAATACA+TGG + chr3_1:94007195-94007214 Msa0389310:intron 25.0%
!! AGTCCAAAATCTGATATTTT+TGG - chr3_1:94007506-94007525 None:intergenic 25.0%
!! AAAAATATCAGATTTTGGAC+TGG + chr3_1:94007505-94007524 Msa0389310:intron 25.0%
! TTACTGTTAGAGATTATATG+TGG + chr3_1:94007761-94007780 Msa0389310:intron 25.0%
! TACTGTTAGAGATTATATGT+GGG + chr3_1:94007762-94007781 Msa0389310:intron 25.0%
! TTTGAGTCAATTATCTGTAA+AGG - chr3_1:94007966-94007985 None:intergenic 25.0%
! TCCTTTACTGAAATATGTAT+CGG - chr3_1:94008262-94008281 None:intergenic 25.0%
TCCAGATACTACATATACTT+TGG + chr3_1:94006249-94006268 Msa0389310:five_prime_UTR 30.0%
CCAGATACTACATATACTTT+GGG + chr3_1:94006250-94006269 Msa0389310:five_prime_UTR 30.0%
CAGATACTACATATACTTTG+GGG + chr3_1:94006251-94006270 Msa0389310:five_prime_UTR 30.0%
AGATACTACATATACTTTGG+GGG + chr3_1:94006252-94006271 Msa0389310:five_prime_UTR 30.0%
ATCGATATCAAACTTATTCC+AGG + chr3_1:94006397-94006416 Msa0389310:CDS 30.0%
TTGTTGACAAATCAAGCAAT+GGG - chr3_1:94006842-94006861 None:intergenic 30.0%
ATTGTTGACAAATCAAGCAA+TGG - chr3_1:94006843-94006862 None:intergenic 30.0%
TTCTCAGAGAAGAACAAAAT+TGG + chr3_1:94006882-94006901 Msa0389310:CDS 30.0%
GTTTATGAATACATGGCTAA+TGG + chr3_1:94007202-94007221 Msa0389310:intron 30.0%
TACCAAAAATGAAGTAGTCT+AGG - chr3_1:94007231-94007250 None:intergenic 30.0%
! CCAATCTAGCAATTTACTTT+TGG - chr3_1:94007357-94007376 None:intergenic 30.0%
CCAAAAGTAAATTGCTAGAT+TGG + chr3_1:94007354-94007373 Msa0389310:intron 30.0%
TAGCAATTCCACATATTATG+TGG - chr3_1:94007391-94007410 None:intergenic 30.0%
ATAATATGTGGAATTGCTAG+AGG + chr3_1:94007392-94007411 Msa0389310:intron 30.0%
TAATATGTGGAATTGCTAGA+GGG + chr3_1:94007393-94007412 Msa0389310:intron 30.0%
!!! TACTACTTTTGAGATCTCTA+TGG - chr3_1:94007457-94007476 None:intergenic 30.0%
TATCTGTGATTCCTTCAATT+TGG - chr3_1:94007550-94007569 None:intergenic 30.0%
GAATCACAGATAGAATTGTT+GGG + chr3_1:94007558-94007577 Msa0389310:intron 30.0%
! CGTCTTTTATAATTTAGGCA+TGG + chr3_1:94007919-94007938 Msa0389310:intron 30.0%
CTGATGTGATTCTAATGTTA+GGG + chr3_1:94008081-94008100 Msa0389310:CDS 30.0%
ACCGATACATATTTCAGTAA+AGG + chr3_1:94008258-94008277 Msa0389310:three_prime_UTR 30.0%
GATACATATTTCAGTAAAGG+AGG + chr3_1:94008261-94008280 Msa0389310:three_prime_UTR 30.0%
! TAAAGGAGGTATAATTCCAT+GGG + chr3_1:94008275-94008294 Msa0389310:three_prime_UTR 30.0%
TCCAGATACTACATATACTT+TGG + chr3_1:94006249-94006268 Msa0389310:five_prime_UTR 30.0%
CCAGATACTACATATACTTT+GGG + chr3_1:94006250-94006269 Msa0389310:five_prime_UTR 30.0%
CAGATACTACATATACTTTG+GGG + chr3_1:94006251-94006270 Msa0389310:five_prime_UTR 30.0%
AGATACTACATATACTTTGG+GGG + chr3_1:94006252-94006271 Msa0389310:five_prime_UTR 30.0%
ATCGATATCAAACTTATTCC+AGG + chr3_1:94006397-94006416 Msa0389310:CDS 30.0%
TTGTTGACAAATCAAGCAAT+GGG - chr3_1:94006842-94006861 None:intergenic 30.0%
ATTGTTGACAAATCAAGCAA+TGG - chr3_1:94006843-94006862 None:intergenic 30.0%
TTCTCAGAGAAGAACAAAAT+TGG + chr3_1:94006882-94006901 Msa0389310:CDS 30.0%
GTTTATGAATACATGGCTAA+TGG + chr3_1:94007202-94007221 Msa0389310:intron 30.0%
TACCAAAAATGAAGTAGTCT+AGG - chr3_1:94007231-94007250 None:intergenic 30.0%
! CCAATCTAGCAATTTACTTT+TGG - chr3_1:94007357-94007376 None:intergenic 30.0%
CCAAAAGTAAATTGCTAGAT+TGG + chr3_1:94007354-94007373 Msa0389310:intron 30.0%
TAGCAATTCCACATATTATG+TGG - chr3_1:94007391-94007410 None:intergenic 30.0%
ATAATATGTGGAATTGCTAG+AGG + chr3_1:94007392-94007411 Msa0389310:intron 30.0%
TAATATGTGGAATTGCTAGA+GGG + chr3_1:94007393-94007412 Msa0389310:intron 30.0%
!!! TACTACTTTTGAGATCTCTA+TGG - chr3_1:94007457-94007476 None:intergenic 30.0%
TATCTGTGATTCCTTCAATT+TGG - chr3_1:94007550-94007569 None:intergenic 30.0%
GAATCACAGATAGAATTGTT+GGG + chr3_1:94007558-94007577 Msa0389310:intron 30.0%
! CGTCTTTTATAATTTAGGCA+TGG + chr3_1:94007919-94007938 Msa0389310:intron 30.0%
CTGATGTGATTCTAATGTTA+GGG + chr3_1:94008081-94008100 Msa0389310:CDS 30.0%
ACCGATACATATTTCAGTAA+AGG + chr3_1:94008258-94008277 Msa0389310:three_prime_UTR 30.0%
GATACATATTTCAGTAAAGG+AGG + chr3_1:94008261-94008280 Msa0389310:three_prime_UTR 30.0%
! TAAAGGAGGTATAATTCCAT+GGG + chr3_1:94008275-94008294 Msa0389310:three_prime_UTR 30.0%
CCCAAAGTATATGTAGTATC+TGG - chr3_1:94006253-94006272 None:intergenic 35.0%
!! AGTATTGGTCTAGAACAATG+TGG + chr3_1:94006280-94006299 Msa0389310:five_prime_UTR 35.0%
CTTGAATAATTGTTCCTGCA+TGG + chr3_1:94006312-94006331 Msa0389310:exon 35.0%
TGTATTTGTATAAGCCATGC+AGG - chr3_1:94006329-94006348 None:intergenic 35.0%
AATACAAATATAAGTGGCGC+AGG + chr3_1:94006343-94006362 Msa0389310:CDS 35.0%
GATATCAAACTTATTCCAGG+TGG + chr3_1:94006400-94006419 Msa0389310:CDS 35.0%
!! TATTCACCTAATTCTGAAGC+AGG - chr3_1:94006451-94006470 None:intergenic 35.0%
AATTACAGTTTCTGCAGCTT+TGG + chr3_1:94006623-94006642 Msa0389310:CDS 35.0%
ATTACAGTTTCTGCAGCTTT+GGG + chr3_1:94006624-94006643 Msa0389310:CDS 35.0%
!!! ATTTTTTCTACAGACTCAGG+AGG + chr3_1:94006667-94006686 Msa0389310:CDS 35.0%
TTCATTCAAATGTCGGAGAA+TGG - chr3_1:94006717-94006736 None:intergenic 35.0%
! TCTTTGACTTCCCTAGAAAA+TGG - chr3_1:94006779-94006798 None:intergenic 35.0%
GAGAAGAACAAAATTGGAGA+AGG + chr3_1:94006888-94006907 Msa0389310:CDS 35.0%
AAGAACAAAATTGGAGAAGG+TGG + chr3_1:94006891-94006910 Msa0389310:CDS 35.0%
! AAAATTGGAGAAGGTGGTTT+TGG + chr3_1:94006897-94006916 Msa0389310:CDS 35.0%
!!! TGGTTTTGGACCTGTATATT+TGG + chr3_1:94006911-94006930 Msa0389310:CDS 35.0%
! AGCCTAGACTACTTCATTTT+TGG + chr3_1:94007226-94007245 Msa0389310:intron 35.0%
CATATTATGTGGAAACGCTT+TGG - chr3_1:94007380-94007399 None:intergenic 35.0%
AAGCGTTTCCACATAATATG+TGG + chr3_1:94007380-94007399 Msa0389310:intron 35.0%
TTCATCAAGATTCTCGATTG+AGG + chr3_1:94007426-94007445 Msa0389310:intron 35.0%
TTTGGAGGAAACCAAATTGA+AGG + chr3_1:94007536-94007555 Msa0389310:intron 35.0%
GGAATCACAGATAGAATTGT+TGG + chr3_1:94007557-94007576 Msa0389310:intron 35.0%
TTACGTTTGCTTATTGCAGT+GGG + chr3_1:94007669-94007688 Msa0389310:intron 35.0%
AATACCAAAGCTGAAAACGT+CGG - chr3_1:94007741-94007760 None:intergenic 35.0%
CAGAGAAGATAAAGTTAGCA+TGG - chr3_1:94007886-94007905 None:intergenic 35.0%
TAATTTAGGCATGGACATTC+TGG + chr3_1:94007928-94007947 Msa0389310:intron 35.0%
! GATAATTGACTCAAACATCG+TGG + chr3_1:94007971-94007990 Msa0389310:CDS 35.0%
GCTGATGTGATTCTAATGTT+AGG + chr3_1:94008080-94008099 Msa0389310:CDS 35.0%
GATGATATTAGATGAGCCTA+AGG + chr3_1:94008112-94008131 Msa0389310:CDS 35.0%
AAGCAAATTCAAGCTCAAGT+GGG + chr3_1:94008168-94008187 Msa0389310:CDS 35.0%
! GTAAAGGAGGTATAATTCCA+TGG + chr3_1:94008274-94008293 Msa0389310:three_prime_UTR 35.0%
! AAAGGAGGTATAATTCCATG+GGG + chr3_1:94008276-94008295 Msa0389310:three_prime_UTR 35.0%
CCCAAAGTATATGTAGTATC+TGG - chr3_1:94006253-94006272 None:intergenic 35.0%
!! AGTATTGGTCTAGAACAATG+TGG + chr3_1:94006280-94006299 Msa0389310:five_prime_UTR 35.0%
CTTGAATAATTGTTCCTGCA+TGG + chr3_1:94006312-94006331 Msa0389310:exon 35.0%
TGTATTTGTATAAGCCATGC+AGG - chr3_1:94006329-94006348 None:intergenic 35.0%
AATACAAATATAAGTGGCGC+AGG + chr3_1:94006343-94006362 Msa0389310:CDS 35.0%
GATATCAAACTTATTCCAGG+TGG + chr3_1:94006400-94006419 Msa0389310:CDS 35.0%
!! TATTCACCTAATTCTGAAGC+AGG - chr3_1:94006451-94006470 None:intergenic 35.0%
AATTACAGTTTCTGCAGCTT+TGG + chr3_1:94006623-94006642 Msa0389310:CDS 35.0%
ATTACAGTTTCTGCAGCTTT+GGG + chr3_1:94006624-94006643 Msa0389310:CDS 35.0%
!!! ATTTTTTCTACAGACTCAGG+AGG + chr3_1:94006667-94006686 Msa0389310:CDS 35.0%
TTCATTCAAATGTCGGAGAA+TGG - chr3_1:94006717-94006736 None:intergenic 35.0%
! TCTTTGACTTCCCTAGAAAA+TGG - chr3_1:94006779-94006798 None:intergenic 35.0%
GAGAAGAACAAAATTGGAGA+AGG + chr3_1:94006888-94006907 Msa0389310:CDS 35.0%
AAGAACAAAATTGGAGAAGG+TGG + chr3_1:94006891-94006910 Msa0389310:CDS 35.0%
! AAAATTGGAGAAGGTGGTTT+TGG + chr3_1:94006897-94006916 Msa0389310:CDS 35.0%
!!! TGGTTTTGGACCTGTATATT+TGG + chr3_1:94006911-94006930 Msa0389310:CDS 35.0%
! AGCCTAGACTACTTCATTTT+TGG + chr3_1:94007226-94007245 Msa0389310:intron 35.0%
CATATTATGTGGAAACGCTT+TGG - chr3_1:94007380-94007399 None:intergenic 35.0%
AAGCGTTTCCACATAATATG+TGG + chr3_1:94007380-94007399 Msa0389310:intron 35.0%
TTCATCAAGATTCTCGATTG+AGG + chr3_1:94007426-94007445 Msa0389310:intron 35.0%
TTTGGAGGAAACCAAATTGA+AGG + chr3_1:94007536-94007555 Msa0389310:intron 35.0%
GGAATCACAGATAGAATTGT+TGG + chr3_1:94007557-94007576 Msa0389310:intron 35.0%
TTACGTTTGCTTATTGCAGT+GGG + chr3_1:94007669-94007688 Msa0389310:intron 35.0%
AATACCAAAGCTGAAAACGT+CGG - chr3_1:94007741-94007760 None:intergenic 35.0%
CAGAGAAGATAAAGTTAGCA+TGG - chr3_1:94007886-94007905 None:intergenic 35.0%
TAATTTAGGCATGGACATTC+TGG + chr3_1:94007928-94007947 Msa0389310:intron 35.0%
! GATAATTGACTCAAACATCG+TGG + chr3_1:94007971-94007990 Msa0389310:CDS 35.0%
GCTGATGTGATTCTAATGTT+AGG + chr3_1:94008080-94008099 Msa0389310:CDS 35.0%
GATGATATTAGATGAGCCTA+AGG + chr3_1:94008112-94008131 Msa0389310:CDS 35.0%
AAGCAAATTCAAGCTCAAGT+GGG + chr3_1:94008168-94008187 Msa0389310:CDS 35.0%
! GTAAAGGAGGTATAATTCCA+TGG + chr3_1:94008274-94008293 Msa0389310:three_prime_UTR 35.0%
! AAAGGAGGTATAATTCCATG+GGG + chr3_1:94008276-94008295 Msa0389310:three_prime_UTR 35.0%
! ATTGGTCTAGAACAATGTGG+AGG + chr3_1:94006283-94006302 Msa0389310:five_prime_UTR 40.0%
AGTGGTTGTGTTATGTGGTT+TGG + chr3_1:94006367-94006386 Msa0389310:CDS 40.0%
ATCAAACTTATTCCAGGTGG+TGG + chr3_1:94006403-94006422 Msa0389310:CDS 40.0%
TCAAACTTATTCCAGGTGGT+GGG + chr3_1:94006404-94006423 Msa0389310:CDS 40.0%
GTGGGCAATTTCTGTATATC+AGG + chr3_1:94006422-94006441 Msa0389310:CDS 40.0%
!! ATAGTATTGACGATGAGCAC+AGG + chr3_1:94006577-94006596 Msa0389310:CDS 40.0%
! CTCTGAGAAATTGTCAGTAG+CGG - chr3_1:94006871-94006890 None:intergenic 40.0%
!!! TTTGGACTGGCTAGAACTTT+TGG + chr3_1:94007518-94007537 Msa0389310:intron 40.0%
CTTACGTTTGCTTATTGCAG+TGG + chr3_1:94007668-94007687 Msa0389310:intron 40.0%
TGTCCATCAATAGCATACTC+TGG - chr3_1:94007704-94007723 None:intergenic 40.0%
! AAATCCGACGTTTTCAGCTT+TGG + chr3_1:94007734-94007753 Msa0389310:intron 40.0%
TAGTGCTTACAGAAGCAACA+AGG - chr3_1:94007829-94007848 None:intergenic 40.0%
! TTGTTGCTTCTGTAAGCACT+AGG + chr3_1:94007828-94007847 Msa0389310:intron 40.0%
ATGTGTGCAACAATATCCAG+AGG + chr3_1:94008043-94008062 Msa0389310:CDS 40.0%
TGCAACAATATCCAGAGGAT+AGG + chr3_1:94008048-94008067 Msa0389310:CDS 40.0%
CATTAGAATCACATCAGCCA+TGG - chr3_1:94008078-94008097 None:intergenic 40.0%
TCTTTCCTCGTAGTAAAACC+TGG - chr3_1:94008140-94008159 None:intergenic 40.0%
GAAGCAAATTCAAGCTCAAG+TGG + chr3_1:94008167-94008186 Msa0389310:CDS 40.0%
AAATTCAAGCTCAAGTGGGA+AGG + chr3_1:94008172-94008191 Msa0389310:CDS 40.0%
! AGTGCTCGGTGAAAATCAAT+AGG + chr3_1:94008233-94008252 Msa0389310:exon 40.0%
AATAGTGACTTTGTTCCCCA+TGG - chr3_1:94008294-94008313 None:intergenic 40.0%
! ATTGGTCTAGAACAATGTGG+AGG + chr3_1:94006283-94006302 Msa0389310:five_prime_UTR 40.0%
AGTGGTTGTGTTATGTGGTT+TGG + chr3_1:94006367-94006386 Msa0389310:CDS 40.0%
ATCAAACTTATTCCAGGTGG+TGG + chr3_1:94006403-94006422 Msa0389310:CDS 40.0%
TCAAACTTATTCCAGGTGGT+GGG + chr3_1:94006404-94006423 Msa0389310:CDS 40.0%
GTGGGCAATTTCTGTATATC+AGG + chr3_1:94006422-94006441 Msa0389310:CDS 40.0%
!! ATAGTATTGACGATGAGCAC+AGG + chr3_1:94006577-94006596 Msa0389310:CDS 40.0%
! CTCTGAGAAATTGTCAGTAG+CGG - chr3_1:94006871-94006890 None:intergenic 40.0%
!!! TTTGGACTGGCTAGAACTTT+TGG + chr3_1:94007518-94007537 Msa0389310:intron 40.0%
CTTACGTTTGCTTATTGCAG+TGG + chr3_1:94007668-94007687 Msa0389310:intron 40.0%
TGTCCATCAATAGCATACTC+TGG - chr3_1:94007704-94007723 None:intergenic 40.0%
! AAATCCGACGTTTTCAGCTT+TGG + chr3_1:94007734-94007753 Msa0389310:intron 40.0%
TAGTGCTTACAGAAGCAACA+AGG - chr3_1:94007829-94007848 None:intergenic 40.0%
! TTGTTGCTTCTGTAAGCACT+AGG + chr3_1:94007828-94007847 Msa0389310:intron 40.0%
ATGTGTGCAACAATATCCAG+AGG + chr3_1:94008043-94008062 Msa0389310:CDS 40.0%
TGCAACAATATCCAGAGGAT+AGG + chr3_1:94008048-94008067 Msa0389310:CDS 40.0%
CATTAGAATCACATCAGCCA+TGG - chr3_1:94008078-94008097 None:intergenic 40.0%
TCTTTCCTCGTAGTAAAACC+TGG - chr3_1:94008140-94008159 None:intergenic 40.0%
GAAGCAAATTCAAGCTCAAG+TGG + chr3_1:94008167-94008186 Msa0389310:CDS 40.0%
AAATTCAAGCTCAAGTGGGA+AGG + chr3_1:94008172-94008191 Msa0389310:CDS 40.0%
! AGTGCTCGGTGAAAATCAAT+AGG + chr3_1:94008233-94008252 Msa0389310:exon 40.0%
AATAGTGACTTTGTTCCCCA+TGG - chr3_1:94008294-94008313 None:intergenic 40.0%
! ACTTTGGGGGATGAGAGTAT+TGG + chr3_1:94006265-94006284 Msa0389310:five_prime_UTR 45.0%
AATATAAGTGGCGCAGGAAG+TGG + chr3_1:94006349-94006368 Msa0389310:CDS 45.0%
CAGGAAGTGGTTGTGTTATG+TGG + chr3_1:94006362-94006381 Msa0389310:CDS 45.0%
AGGATGCCTGCTTCAGAATT+AGG + chr3_1:94006442-94006461 Msa0389310:CDS 45.0%
CTAGGGAAGTCAAAGACAGA+AGG + chr3_1:94006783-94006802 Msa0389310:intron 45.0%
AGGCAACTATGAGAGACACA+TGG + chr3_1:94006803-94006822 Msa0389310:CDS 45.0%
TGAGAGACACATGGACGATA+TGG + chr3_1:94006812-94006831 Msa0389310:CDS 45.0%
ATCCAGGGAAAGTTTGAGAG+TGG + chr3_1:94007031-94007050 Msa0389310:intron 45.0%
TCCAGGGAAAGTTTGAGAGT+GGG + chr3_1:94007032-94007051 Msa0389310:intron 45.0%
TTTCACTGAGCTCAGCACAA+GGG + chr3_1:94007077-94007096 Msa0389310:intron 45.0%
TGCTTATTGCAGTGGGTACA+TGG + chr3_1:94007676-94007695 Msa0389310:intron 45.0%
GCACCAGAGTATGCTATTGA+TGG + chr3_1:94007698-94007717 Msa0389310:intron 45.0%
GCTGAAAACGTCGGATTTCA+CGG - chr3_1:94007732-94007751 None:intergenic 45.0%
! GCATGGACATTCTGGAAACA+TGG + chr3_1:94007936-94007955 Msa0389310:CDS 45.0%
AGAATCACATCAGCCATGGT+AGG - chr3_1:94008074-94008093 None:intergenic 45.0%
GTAGTAAAACCTGGCTCCTT+AGG - chr3_1:94008131-94008150 None:intergenic 45.0%
! CGATGAGCTCTTTTAGTGCT+CGG + chr3_1:94008219-94008238 Msa0389310:CDS 45.0%
! ACTTTGGGGGATGAGAGTAT+TGG + chr3_1:94006265-94006284 Msa0389310:five_prime_UTR 45.0%
AATATAAGTGGCGCAGGAAG+TGG + chr3_1:94006349-94006368 Msa0389310:CDS 45.0%
CAGGAAGTGGTTGTGTTATG+TGG + chr3_1:94006362-94006381 Msa0389310:CDS 45.0%
AGGATGCCTGCTTCAGAATT+AGG + chr3_1:94006442-94006461 Msa0389310:CDS 45.0%
CTAGGGAAGTCAAAGACAGA+AGG + chr3_1:94006783-94006802 Msa0389310:intron 45.0%
AGGCAACTATGAGAGACACA+TGG + chr3_1:94006803-94006822 Msa0389310:CDS 45.0%
TGAGAGACACATGGACGATA+TGG + chr3_1:94006812-94006831 Msa0389310:CDS 45.0%
ATCCAGGGAAAGTTTGAGAG+TGG + chr3_1:94007031-94007050 Msa0389310:intron 45.0%
TCCAGGGAAAGTTTGAGAGT+GGG + chr3_1:94007032-94007051 Msa0389310:intron 45.0%
TTTCACTGAGCTCAGCACAA+GGG + chr3_1:94007077-94007096 Msa0389310:intron 45.0%
TGCTTATTGCAGTGGGTACA+TGG + chr3_1:94007676-94007695 Msa0389310:intron 45.0%
GCACCAGAGTATGCTATTGA+TGG + chr3_1:94007698-94007717 Msa0389310:intron 45.0%
GCTGAAAACGTCGGATTTCA+CGG - chr3_1:94007732-94007751 None:intergenic 45.0%
! GCATGGACATTCTGGAAACA+TGG + chr3_1:94007936-94007955 Msa0389310:CDS 45.0%
AGAATCACATCAGCCATGGT+AGG - chr3_1:94008074-94008093 None:intergenic 45.0%
GTAGTAAAACCTGGCTCCTT+AGG - chr3_1:94008131-94008150 None:intergenic 45.0%
! CGATGAGCTCTTTTAGTGCT+CGG + chr3_1:94008219-94008238 Msa0389310:CDS 45.0%
TACAGAAATTGCCCACCACC+TGG - chr3_1:94006418-94006437 None:intergenic 50.0%
! GTATTGACGATGAGCACAGG+AGG + chr3_1:94006580-94006599 Msa0389310:CDS 50.0%
!! AGACTCAGGAGGAGCATTGT+TGG + chr3_1:94006678-94006697 Msa0389310:CDS 50.0%
ACCCACTCTCAAACTTTCCC+TGG - chr3_1:94007036-94007055 None:intergenic 50.0%
CTTTCACTGAGCTCAGCACA+AGG + chr3_1:94007076-94007095 Msa0389310:intron 50.0%
!!! GGACTGGCTAGAACTTTTGG+AGG + chr3_1:94007521-94007540 Msa0389310:intron 50.0%
GCACACATAAGAGTCCAACG+TGG - chr3_1:94008031-94008050 None:intergenic 50.0%
TTAGATGAGCCTAAGGAGCC+AGG + chr3_1:94008119-94008138 Msa0389310:CDS 50.0%
! AGGAGCCAGGTTTTACTACG+AGG + chr3_1:94008132-94008151 Msa0389310:CDS 50.0%
TACAGAAATTGCCCACCACC+TGG - chr3_1:94006418-94006437 None:intergenic 50.0%
! GTATTGACGATGAGCACAGG+AGG + chr3_1:94006580-94006599 Msa0389310:CDS 50.0%
!! AGACTCAGGAGGAGCATTGT+TGG + chr3_1:94006678-94006697 Msa0389310:CDS 50.0%
ACCCACTCTCAAACTTTCCC+TGG - chr3_1:94007036-94007055 None:intergenic 50.0%
CTTTCACTGAGCTCAGCACA+AGG + chr3_1:94007076-94007095 Msa0389310:intron 50.0%
!!! GGACTGGCTAGAACTTTTGG+AGG + chr3_1:94007521-94007540 Msa0389310:intron 50.0%
GCACACATAAGAGTCCAACG+TGG - chr3_1:94008031-94008050 None:intergenic 50.0%
TTAGATGAGCCTAAGGAGCC+AGG + chr3_1:94008119-94008138 Msa0389310:CDS 50.0%
! AGGAGCCAGGTTTTACTACG+AGG + chr3_1:94008132-94008151 Msa0389310:CDS 50.0%
GTATCGCGTTGCATCCACGT+TGG + chr3_1:94008014-94008033 Msa0389310:CDS 55.0%
TCCAGAGGATAGGCCTACCA+TGG + chr3_1:94008058-94008077 Msa0389310:CDS 55.0%
GTATCGCGTTGCATCCACGT+TGG + chr3_1:94008014-94008033 Msa0389310:CDS 55.0%
TCCAGAGGATAGGCCTACCA+TGG + chr3_1:94008058-94008077 Msa0389310:CDS 55.0%
GCCATGGTAGGCCTATCCTC+TGG - chr3_1:94008062-94008081 None:intergenic 60.0%
GCCATGGTAGGCCTATCCTC+TGG - chr3_1:94008062-94008081 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 94006235 94008328 94006235 ID=Msa0389310;Name=Msa0389310
chr3_1 mRNA 94006235 94008328 94006235 ID=Msa0389310-mRNA-1;Parent=Msa0389310;Name=Msa0389310-mRNA-1;_AED=0.44;_eAED=0.44;_QI=96|0.66|0.75|1|1|0.75|4|84|240
chr3_1 exon 94006235 94006463 94006235 ID=Msa0389310-mRNA-1:exon:26664;Parent=Msa0389310-mRNA-1
chr3_1 exon 94006565 94006699 94006565 ID=Msa0389310-mRNA-1:exon:26665;Parent=Msa0389310-mRNA-1
chr3_1 exon 94006787 94006932 94006787 ID=Msa0389310-mRNA-1:exon:26666;Parent=Msa0389310-mRNA-1
chr3_1 exon 94007936 94008328 94007936 ID=Msa0389310-mRNA-1:exon:26667;Parent=Msa0389310-mRNA-1
chr3_1 five_prime_UTR 94006235 94006330 94006235 ID=Msa0389310-mRNA-1:five_prime_utr;Parent=Msa0389310-mRNA-1
chr3_1 CDS 94006331 94006463 94006331 ID=Msa0389310-mRNA-1:cds;Parent=Msa0389310-mRNA-1
chr3_1 CDS 94006565 94006699 94006565 ID=Msa0389310-mRNA-1:cds;Parent=Msa0389310-mRNA-1
chr3_1 CDS 94006787 94006932 94006787 ID=Msa0389310-mRNA-1:cds;Parent=Msa0389310-mRNA-1
chr3_1 CDS 94007936 94008244 94007936 ID=Msa0389310-mRNA-1:cds;Parent=Msa0389310-mRNA-1
chr3_1 three_prime_UTR 94008245 94008328 94008245 ID=Msa0389310-mRNA-1:three_prime_utr;Parent=Msa0389310-mRNA-1
Gene Sequence

>Msa0389310

ATGGCTTATACAAATACAAATATAAGTGGCGCAGGAAGTGGTTGTGTTATGTGGTTTGGTGATTTAATCGATATCAAACTTATTCCAGGTGGTGGGCAATTTCTGTATATCAGGATGCCTGCTTCAGAATTAGATAAAGGCAACAATAGTATTGACGATGAGCACAGGAGGAACACGAGAAAAATAGTTGTAATTACAGTTTCTGCAGCTTTGGGAATGCTTTTACTTGCTATTTATTTTTTCTACAGACTCAGGAGGAGCATTGTTGGGAAGTCAAAGACAGAAGGCAACTATGAGAGACACATGGACGATATGGATCTCCCATTGCTTGATTTGTCAACAATTATTACCGCTACTGACAATTTCTCAGAGAAGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATATTTGGCATGGACATTCTGGAAACATGGAAGACCTTTACAGATAATTGACTCAAACATCGTGGATTCATGCATTGTATCTGAAGTATCGCGTTGCATCCACGTTGGACTCTTATGTGTGCAACAATATCCAGAGGATAGGCCTACCATGGCTGATGTGATTCTAATGTTAGGGAGTGAGATGATGATATTAGATGAGCCTAAGGAGCCAGGTTTTACTACGAGGAAAGAATCTGCTGAAGCAAATTCAAGCTCAAGTGGGAAGGATACAAGTTCAAACTACGAAATGACGATGAGCTCTTTTAGTGCTCGGTGA
Protein sequence

>Msa0389310

MAYTNTNISGAGSGCVMWFGDLIDIKLIPGGGQFLYIRMPASELDKGNNSIDDEHRRNTRKIVVITVSAALGMLLLAIYFFYRLRRSIVGKSKTEGNYERHMDDMDLPLLDLSTIITATDNFSEKNKIGEGGFGPVYLAWTFWKHGRPLQIIDSNIVDSCIVSEVSRCIHVGLLCVQQYPEDRPTMADVILMLGSEMMILDEPKEPGFTTRKESAEANSSSSGKDTSSNYEMTMSSFSAR*