Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050490 | KEH21711.1 | 89.899 | 99 | 10 | 0 | 3 | 101 | 775 | 873 | 3.10e-53 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050490 | A0A072TWY8 | 89.899 | 99 | 10 | 0 | 3 | 101 | 775 | 873 | 1.48e-53 | 188 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014790 | Msa1050490 | 0.815416 | 9.350221e-52 | -8.615850e-47 |
| Msa0032290 | Msa1050490 | 0.849944 | 2.335086e-60 | -8.615850e-47 |
| Msa0074780 | Msa1050490 | 0.811882 | 5.604050e-51 | -8.615850e-47 |
| Msa0088550 | Msa1050490 | 0.801459 | 8.916418e-49 | -8.615850e-47 |
| Msa0629850 | Msa1050490 | 0.805030 | 1.625479e-49 | -8.615850e-47 |
| Msa0629890 | Msa1050490 | 0.834710 | 2.560743e-56 | -8.615850e-47 |
| Msa0629930 | Msa1050490 | 0.818416 | 1.982859e-52 | -8.615850e-47 |
| Msa0629940 | Msa1050490 | 0.802182 | 6.333211e-49 | -8.615850e-47 |
| Msa0630060 | Msa1050490 | 0.832565 | 8.790189e-56 | -8.615850e-47 |
| Msa0632540 | Msa1050490 | 0.817747 | 2.809337e-52 | -8.615850e-47 |
| Msa0678240 | Msa1050490 | 0.816543 | 5.238236e-52 | -8.615850e-47 |
| Msa0733400 | Msa1050490 | 0.807702 | 4.442370e-50 | -8.615850e-47 |
| Msa0752580 | Msa1050490 | 0.851548 | 8.258453e-61 | -8.615850e-47 |
| Msa0754180 | Msa1050490 | 0.814611 | 1.410508e-51 | -8.615850e-47 |
| Msa0754500 | Msa1050490 | 0.848398 | 6.287054e-60 | -8.615850e-47 |
| Msa0756410 | Msa1050490 | 0.818555 | 1.844363e-52 | -8.615850e-47 |
| Msa0761640 | Msa1050490 | 0.813126 | 2.996844e-51 | -8.615850e-47 |
| Msa0773610 | Msa1050490 | 0.804853 | 1.769628e-49 | -8.615850e-47 |
| Msa0784580 | Msa1050490 | 0.807681 | 4.488799e-50 | -8.615850e-47 |
| Msa0784710 | Msa1050490 | 0.832691 | 8.183321e-56 | -8.615850e-47 |
| Msa0811000 | Msa1050490 | 0.822863 | 1.886920e-53 | -8.615850e-47 |
| Msa0818010 | Msa1050490 | 0.817558 | 3.097935e-52 | -8.615850e-47 |
| Msa0818030 | Msa1050490 | 0.824911 | 6.244066e-54 | -8.615850e-47 |
| Msa0819740 | Msa1050490 | 0.825276 | 5.121138e-54 | -8.615850e-47 |
| Msa0830900 | Msa1050490 | 0.840100 | 1.065271e-57 | -8.615850e-47 |
| Msa0842050 | Msa1050490 | 0.816195 | 6.267727e-52 | -8.615850e-47 |
| Msa0142230 | Msa1050490 | 0.806797 | 6.910158e-50 | -8.615850e-47 |
| Msa0153430 | Msa1050490 | 0.825194 | 5.354632e-54 | -8.615850e-47 |
| Msa0153440 | Msa1050490 | 0.845512 | 3.877209e-59 | -8.615850e-47 |
| Msa0154580 | Msa1050490 | 0.800663 | 1.296932e-48 | -8.615850e-47 |
| Msa0172440 | Msa1050490 | 0.820063 | 8.358823e-53 | -8.615850e-47 |
| Msa0203070 | Msa1050490 | 0.813060 | 3.098471e-51 | -8.615850e-47 |
| Msa0211670 | Msa1050490 | 0.846197 | 2.526496e-59 | -8.615850e-47 |
| Msa0212210 | Msa1050490 | 0.833067 | 6.599035e-56 | -8.615850e-47 |
| Msa0232860 | Msa1050490 | 0.829409 | 5.231790e-55 | -8.615850e-47 |
| Msa0235550 | Msa1050490 | 0.805794 | 1.124032e-49 | -8.615850e-47 |
| Msa0389030 | Msa1050490 | 0.803994 | 2.673050e-49 | -8.615850e-47 |
| Msa0389050 | Msa1050490 | 0.866643 | 2.453951e-65 | -8.615850e-47 |
| Msa0389310 | Msa1050490 | 0.804872 | 1.753504e-49 | -8.615850e-47 |
| Msa0409820 | Msa1050490 | 0.824599 | 7.398204e-54 | -8.615850e-47 |
| Msa0411000 | Msa1050490 | 0.808036 | 3.772800e-50 | -8.615850e-47 |
| Msa0439700 | Msa1050490 | 0.814370 | 1.594780e-51 | -8.615850e-47 |
| Msa0455230 | Msa1050490 | 0.801034 | 1.089233e-48 | -8.615850e-47 |
| Msa0455260 | Msa1050490 | 0.816841 | 4.492154e-52 | -8.615850e-47 |
| Msa0457370 | Msa1050490 | 0.805122 | 1.554577e-49 | -8.615850e-47 |
| Msa0481320 | Msa1050490 | 0.807854 | 4.123297e-50 | -8.615850e-47 |
| Msa0986870 | Msa1050490 | 0.810484 | 1.126382e-50 | -8.615850e-47 |
| Msa0988500 | Msa1050490 | 0.802826 | 4.665195e-49 | -8.615850e-47 |
| Msa1006250 | Msa1050490 | 0.806186 | 9.294522e-50 | -8.615850e-47 |
| Msa1006460 | Msa1050490 | 0.833132 | 6.355176e-56 | -8.615850e-47 |
| Msa1006600 | Msa1050490 | 0.820728 | 5.885477e-53 | -8.615850e-47 |
| Msa1006680 | Msa1050490 | 0.833193 | 6.139187e-56 | -8.615850e-47 |
| Msa1008340 | Msa1050490 | 0.815636 | 8.351168e-52 | -8.615850e-47 |
| Msa1009150 | Msa1050490 | 0.844618 | 6.762034e-59 | -8.615850e-47 |
| Msa1009170 | Msa1050490 | 0.851187 | 1.045155e-60 | -8.615850e-47 |
| Msa1009180 | Msa1050490 | 0.804985 | 1.660565e-49 | -8.615850e-47 |
| Msa1009190 | Msa1050490 | 0.817139 | 3.849169e-52 | -8.615850e-47 |
| Msa1009220 | Msa1050490 | 0.800623 | 1.321426e-48 | -8.615850e-47 |
| Msa1014350 | Msa1050490 | 0.810993 | 8.744749e-51 | -8.615850e-47 |
| Msa1037580 | Msa1050490 | 0.824002 | 1.021995e-53 | -8.615850e-47 |
| Msa1048590 | Msa1050490 | 0.816213 | 6.208840e-52 | -8.615850e-47 |
| Msa1048610 | Msa1050490 | 0.821813 | 3.306892e-53 | -8.615850e-47 |
| Msa1049950 | Msa1050490 | 0.806536 | 7.841630e-50 | -8.615850e-47 |
| Msa1050480 | Msa1050490 | 0.857666 | 1.397401e-62 | -8.615850e-47 |
| Msa1050490 | Msa1050500 | 0.892550 | 1.431615e-74 | -8.615850e-47 |
| Msa1050490 | Msa1052070 | 0.826437 | 2.714402e-54 | -8.615850e-47 |
| Msa1050490 | Msa1052080 | 0.812113 | 4.992183e-51 | -8.615850e-47 |
| Msa1050490 | Msa1072350 | 0.807620 | 4.625136e-50 | -8.615850e-47 |
| Msa1050490 | Msa1076630 | 0.809734 | 1.634204e-50 | -8.615850e-47 |
| Msa1050490 | Msa1093390 | 0.804836 | 1.784240e-49 | -8.615850e-47 |
| Msa1050490 | Msa1098350 | 0.810052 | 1.396149e-50 | -8.615850e-47 |
| Msa1050490 | Msa1098380 | 0.835715 | 1.428109e-56 | -8.615850e-47 |
| Msa1050490 | Msa1100180 | 0.800663 | 1.296686e-48 | -8.615850e-47 |
| Msa1050490 | Msa1113210 | 0.808255 | 3.388760e-50 | -8.615850e-47 |
| Msa1050490 | Msa1113280 | 0.802583 | 5.237419e-49 | -8.615850e-47 |
| Msa1050490 | Msa1135660 | 0.865623 | 5.162509e-65 | -8.615850e-47 |
| Msa1050490 | Msa1138450 | 0.855861 | 4.749397e-62 | -8.615850e-47 |
| Msa1050490 | Msa1138480 | 0.898377 | 5.631851e-77 | -8.615850e-47 |
| Msa1050490 | Msa1138490 | 0.823416 | 1.401694e-53 | -8.615850e-47 |
| Msa1050490 | Msa1140460 | 0.806988 | 6.294525e-50 | -8.615850e-47 |
| Msa1050490 | Msa1154820 | 0.807269 | 5.488891e-50 | -8.615850e-47 |
| Msa1050490 | Msa1167000 | 0.805310 | 1.419887e-49 | -8.615850e-47 |
| Msa1050490 | Msa1182780 | 0.809554 | 1.786578e-50 | -8.615850e-47 |
| Msa1050490 | Msa1182830 | 0.845674 | 3.504965e-59 | -8.615850e-47 |
| Msa1050490 | Msa1204430 | 0.821765 | 3.393586e-53 | -8.615850e-47 |
| Msa1050490 | Msa1232130 | 0.803632 | 3.177719e-49 | -8.615850e-47 |
| Msa1050490 | Msa1238130 | 0.828828 | 7.236775e-55 | -8.615850e-47 |
| Msa1050490 | Msa1258280 | 0.818350 | 2.052143e-52 | -8.615850e-47 |
| Msa1050490 | Msa1279850 | 0.817020 | 4.093810e-52 | -8.615850e-47 |
| Msa1050490 | Msa1279860 | 0.811597 | 6.464401e-51 | -8.615850e-47 |
| Msa1050490 | Msa1279870 | 0.808567 | 2.906419e-50 | -8.615850e-47 |
| Msa1050490 | Msa1285830 | 0.816957 | 4.230922e-52 | -8.615850e-47 |
| Msa1050490 | Msa1287700 | 0.809878 | 1.521746e-50 | -8.615850e-47 |
| Msa1050490 | Msa1296650 | 0.822770 | 1.982843e-53 | -8.615850e-47 |
| Msa1050490 | Msa1298290 | 0.821213 | 4.549347e-53 | -8.615850e-47 |
| Msa1050490 | Msa1304850 | 0.819894 | 9.136711e-53 | -8.615850e-47 |
| Msa1050490 | Msa1311150 | 0.815448 | 9.198143e-52 | -8.615850e-47 |
| Msa1050490 | Msa1312680 | 0.806822 | 6.826201e-50 | -8.615850e-47 |
| Msa1050490 | Msa1317710 | 0.804193 | 2.428990e-49 | -8.615850e-47 |
| Msa1050490 | Msa1352060 | 0.835442 | 1.673813e-56 | -8.615850e-47 |
| Msa1050490 | Msa1384320 | 0.808273 | 3.358411e-50 | -8.615850e-47 |
| Msa1050490 | Msa1426750 | 0.815070 | 1.115856e-51 | -8.615850e-47 |
| Msa1050490 | Msa1447440 | 0.812435 | 4.245251e-51 | -8.615850e-47 |
| Msa1050490 | Msa1459170 | 0.846433 | 2.178964e-59 | -8.615850e-47 |
| Msa1050490 | Msa1460310 | -0.822974 | 1.777616e-53 | -8.615850e-47 |
| Msa0254190 | Msa1050490 | 0.849979 | 2.283634e-60 | -8.615850e-47 |
| Msa0264940 | Msa1050490 | -0.815323 | 9.806018e-52 | -8.615850e-47 |
| Msa0273560 | Msa1050490 | 0.801378 | 9.261568e-49 | -8.615850e-47 |
| Msa0284810 | Msa1050490 | 0.816894 | 4.370707e-52 | -8.615850e-47 |
| Msa0302990 | Msa1050490 | -0.823031 | 1.723727e-53 | -8.615850e-47 |
| Msa0311330 | Msa1050490 | 0.802087 | 6.624216e-49 | -8.615850e-47 |
| Msa0329550 | Msa1050490 | 0.819981 | 8.727938e-53 | -8.615850e-47 |
| Msa0331430 | Msa1050490 | 0.812385 | 4.354398e-51 | -8.615850e-47 |
| Msa0363440 | Msa1050490 | 0.808699 | 2.724031e-50 | -8.615850e-47 |
| Msa0363460 | Msa1050490 | 0.801443 | 8.981889e-49 | -8.615850e-47 |
| Msa0499710 | Msa1050490 | 0.817109 | 3.911315e-52 | -8.615850e-47 |
| Msa0505390 | Msa1050490 | 0.800211 | 1.603288e-48 | -8.615850e-47 |
| Msa0530930 | Msa1050490 | 0.800840 | 1.193049e-48 | -8.615850e-47 |
| Msa0549740 | Msa1050490 | 0.819112 | 1.378199e-52 | -8.615850e-47 |
| Msa0591780 | Msa1050490 | 0.812844 | 3.455992e-51 | -8.615850e-47 |
| Msa0592540 | Msa1050490 | 0.805813 | 1.113764e-49 | -8.615850e-47 |
| Msa0599250 | Msa1050490 | 0.811137 | 8.136022e-51 | -8.615850e-47 |
| Msa0862020 | Msa1050490 | 0.822097 | 2.841956e-53 | -8.615850e-47 |
| Msa0883350 | Msa1050490 | 0.818311 | 2.093861e-52 | -8.615850e-47 |
| Msa0883410 | Msa1050490 | 0.813539 | 2.432031e-51 | -8.615850e-47 |
| Msa0883450 | Msa1050490 | 0.804516 | 2.080302e-49 | -8.615850e-47 |
| Msa0883660 | Msa1050490 | 0.829553 | 4.826708e-55 | -8.615850e-47 |
| Msa0883670 | Msa1050490 | 0.823809 | 1.134061e-53 | -8.615850e-47 |
| Msa0885010 | Msa1050490 | 0.811051 | 8.495932e-51 | -8.615850e-47 |
| Msa0887000 | Msa1050490 | 0.804243 | 2.371960e-49 | -8.615850e-47 |
| Msa0902980 | Msa1050490 | 0.815732 | 7.949150e-52 | -8.615850e-47 |
| Msa0912500 | Msa1050490 | 0.814751 | 1.313733e-51 | -8.615850e-47 |
| Msa0951720 | Msa1050490 | 0.810728 | 9.979086e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050490 | MtrunA17_Chr7g0219651 | 89.899 | 99 | 10 | 0 | 3 | 101 | 1770 | 1868 | 5.51e-57 | 188 |
| Msa1050490 | MtrunA17_Chr7g0219651 | 78.641 | 103 | 16 | 1 | 3 | 99 | 774 | 876 | 9.14e-48 | 162 |
| Msa1050490 | MtrunA17_Chr7g0219571 | 88.889 | 99 | 11 | 0 | 3 | 101 | 785 | 883 | 1.30e-56 | 187 |
| Msa1050490 | MtrunA17_Chr7g0219581 | 67.593 | 108 | 26 | 1 | 3 | 101 | 209 | 316 | 2.20e-44 | 145 |
| Msa1050490 | MtrunA17_Chr4g0025961 | 68.519 | 108 | 25 | 1 | 3 | 101 | 778 | 885 | 1.25e-42 | 147 |
| Msa1050490 | MtrunA17_Chr7g0219601 | 67.593 | 108 | 26 | 1 | 3 | 101 | 769 | 876 | 1.18e-39 | 139 |
| Msa1050490 | MtrunA17_Chr7g0219611 | 66.667 | 99 | 28 | 1 | 3 | 101 | 765 | 858 | 3.97e-34 | 123 |
| Msa1050490 | MtrunA17_Chr7g0219621 | 93.023 | 43 | 3 | 0 | 3 | 45 | 176 | 218 | 3.57e-21 | 83.6 |
| Msa1050490 | MtrunA17_Chr7g0219671 | 48.624 | 109 | 33 | 5 | 3 | 90 | 783 | 889 | 5.71e-20 | 83.2 |
| Msa1050490 | MtrunA17_Chr7g0219721 | 44.340 | 106 | 41 | 3 | 3 | 90 | 783 | 888 | 5.48e-17 | 74.7 |
| Msa1050490 | MtrunA17_Chr7g0219781 | 47.706 | 109 | 34 | 5 | 3 | 90 | 786 | 892 | 1.74e-16 | 73.2 |
| Msa1050490 | MtrunA17_Chr7g0219691 | 43.396 | 106 | 42 | 3 | 3 | 90 | 783 | 888 | 8.11e-16 | 71.2 |
| Msa1050490 | MtrunA17_Chr7g0219761 | 60.465 | 43 | 17 | 0 | 3 | 45 | 38 | 80 | 3.05e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 23 sgRNAs with CRISPR-Local
Find 28 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACAACCTTTCTTTGAGAT+TGG | 0.303108 | 7_2:-15246403 | Msa1050490:CDS |
| AACAACCTTTCTTTGAGATT+GGG | 0.389275 | 7_2:-15246402 | Msa1050490:CDS |
| AAAGGTTGTTCTTGAGTACT+TGG | 0.402756 | 7_2:+15246415 | None:intergenic |
| AGTGAGGAAGATAGTCAGTT+TGG | 0.417130 | 7_2:-15246535 | Msa1050490:CDS |
| CTTCAATGAGTCAAGTGGTT+GGG | 0.422708 | 7_2:-15246588 | Msa1050490:CDS |
| TTCAATGAGTCAAGTGGTTG+GGG | 0.429791 | 7_2:-15246587 | Msa1050490:CDS |
| CGAGACGGTACTCTCCTTGT+AGG | 0.441050 | 7_2:+15246444 | None:intergenic |
| TTAAGTTGTTTGCATGATGA+TGG | 0.466658 | 7_2:-15246622 | Msa1050490:CDS |
| TTTAGAGTTTGCGCTGCAAT+CGG | 0.467593 | 7_2:-15246563 | Msa1050490:CDS |
| TGATTCCCAATCTCAAAGAA+AGG | 0.479223 | 7_2:+15246397 | None:intergenic |
| CCAACCACTTGACTCATTGA+AGG | 0.486871 | 7_2:+15246589 | None:intergenic |
| GGACATATATGAGTGATGAA+TGG | 0.511823 | 7_2:-15246495 | Msa1050490:CDS |
| CACGAGATCGCACACCTACA+AGG | 0.527211 | 7_2:-15246458 | Msa1050490:CDS |
| TAAGTTGTTTGCATGATGAT+GGG | 0.556475 | 7_2:-15246621 | Msa1050490:CDS |
| AGTACTTGGCCTCGCCGAGA+CGG | 0.577496 | 7_2:+15246429 | None:intergenic |
| AGAGTTTGCGCTGCAATCGG+TGG | 0.584786 | 7_2:-15246560 | Msa1050490:CDS |
| CCTTCAATGAGTCAAGTGGT+TGG | 0.599636 | 7_2:-15246589 | Msa1050490:CDS |
| ACGACCTTCAATGAGTCAAG+TGG | 0.623156 | 7_2:-15246593 | Msa1050490:CDS |
| CTACAAGGAGAGTACCGTCT+CGG | 0.656380 | 7_2:-15246443 | Msa1050490:CDS |
| GCTGCAATCGGTGGTGAGTG+AGG | 0.659967 | 7_2:-15246551 | Msa1050490:CDS |
| TCAATGAGTCAAGTGGTTGG+GGG | 0.661801 | 7_2:-15246586 | Msa1050490:CDS |
| AGATTGGGAATCAAAGAACA+CGG | 0.692151 | 7_2:-15246387 | Msa1050490:CDS |
| AGGAGAGTACCGTCTCGGCG+AGG | 0.710756 | 7_2:-15246438 | Msa1050490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATATAAGTTTTGAAGTTT+TGG | + | chr7_2:15246655-15246674 | None:intergenic | 20.0% |
| !! | TTTGGAATATTATTGCAAGT+TGG | - | chr7_2:15246358-15246377 | Msa1050490:CDS | 25.0% |
| ! | TTAAGTTGTTTGCATGATGA+TGG | - | chr7_2:15246383-15246402 | Msa1050490:CDS | 30.0% |
| TAAGTTGTTTGCATGATGAT+GGG | - | chr7_2:15246384-15246403 | Msa1050490:CDS | 30.0% | |
| ! | CATATATGTCCTCTCTTTTT+GGG | + | chr7_2:15246501-15246520 | None:intergenic | 30.0% |
| ! | TCATATATGTCCTCTCTTTT+TGG | + | chr7_2:15246502-15246521 | None:intergenic | 30.0% |
| !! | AACAACCTTTCTTTGAGATT+GGG | - | chr7_2:15246603-15246622 | Msa1050490:CDS | 30.0% |
| GGACATATATGAGTGATGAA+TGG | - | chr7_2:15246510-15246529 | Msa1050490:CDS | 35.0% | |
| AAAGGTTGTTCTTGAGTACT+TGG | + | chr7_2:15246593-15246612 | None:intergenic | 35.0% | |
| !! | GAACAACCTTTCTTTGAGAT+TGG | - | chr7_2:15246602-15246621 | Msa1050490:CDS | 35.0% |
| TGATTCCCAATCTCAAAGAA+AGG | + | chr7_2:15246611-15246630 | None:intergenic | 35.0% | |
| AGATTGGGAATCAAAGAACA+CGG | - | chr7_2:15246618-15246637 | Msa1050490:CDS | 35.0% | |
| CTTCAATGAGTCAAGTGGTT+GGG | - | chr7_2:15246417-15246436 | Msa1050490:CDS | 40.0% | |
| TTCAATGAGTCAAGTGGTTG+GGG | - | chr7_2:15246418-15246437 | Msa1050490:CDS | 40.0% | |
| ! | TTTAGAGTTTGCGCTGCAAT+CGG | - | chr7_2:15246442-15246461 | Msa1050490:CDS | 40.0% |
| AGTGAGGAAGATAGTCAGTT+TGG | - | chr7_2:15246470-15246489 | Msa1050490:CDS | 40.0% | |
| ACGACCTTCAATGAGTCAAG+TGG | - | chr7_2:15246412-15246431 | Msa1050490:CDS | 45.0% | |
| CCAACCACTTGACTCATTGA+AGG | + | chr7_2:15246419-15246438 | None:intergenic | 45.0% | |
| CCTTCAATGAGTCAAGTGGT+TGG | - | chr7_2:15246416-15246435 | Msa1050490:CDS | 45.0% | |
| TCAATGAGTCAAGTGGTTGG+GGG | - | chr7_2:15246419-15246438 | Msa1050490:CDS | 45.0% | |
| TTGGTACGACCCAAAAAGAG+AGG | - | chr7_2:15246489-15246508 | Msa1050490:CDS | 45.0% | |
| !! | CTACAAGGAGAGTACCGTCT+CGG | - | chr7_2:15246562-15246581 | Msa1050490:CDS | 50.0% |
| AGAGTTTGCGCTGCAATCGG+TGG | - | chr7_2:15246445-15246464 | Msa1050490:CDS | 55.0% | |
| CACGAGATCGCACACCTACA+AGG | - | chr7_2:15246547-15246566 | Msa1050490:CDS | 55.0% | |
| CGAGACGGTACTCTCCTTGT+AGG | + | chr7_2:15246564-15246583 | None:intergenic | 55.0% | |
| GCTGCAATCGGTGGTGAGTG+AGG | - | chr7_2:15246454-15246473 | Msa1050490:CDS | 60.0% | |
| AGTACTTGGCCTCGCCGAGA+CGG | + | chr7_2:15246579-15246598 | None:intergenic | 60.0% | |
| !! | AGGAGAGTACCGTCTCGGCG+AGG | - | chr7_2:15246567-15246586 | Msa1050490:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 15246351 | 15246676 | 15246351 | ID=Msa1050490;Name=Msa1050490 |
| chr7_2 | mRNA | 15246351 | 15246676 | 15246351 | ID=Msa1050490-mRNA-1;Parent=Msa1050490;Name=Msa1050490-mRNA-1;_AED=0.73;_eAED=0.74;_QI=0|0|0|1|0|0|2|0|101 |
| chr7_2 | exon | 15246671 | 15246676 | 15246671 | ID=Msa1050490-mRNA-1:exon:3644;Parent=Msa1050490-mRNA-1 |
| chr7_2 | exon | 15246351 | 15246650 | 15246351 | ID=Msa1050490-mRNA-1:exon:3643;Parent=Msa1050490-mRNA-1 |
| chr7_2 | CDS | 15246671 | 15246676 | 15246671 | ID=Msa1050490-mRNA-1:cds;Parent=Msa1050490-mRNA-1 |
| chr7_2 | CDS | 15246351 | 15246650 | 15246351 | ID=Msa1050490-mRNA-1:cds;Parent=Msa1050490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
