AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431830 MtrunA17_Chr3g0136611 92.814 988 59 2 3 989 2 978 0.0 1847
Msa0431830 MtrunA17_Chr3g0136621 86.673 998 117 5 3 995 4 990 0.0 1734
Msa0431830 MtrunA17_Chr8g0370261 36.999 873 494 20 24 886 36 862 8.00e-172 526
Msa0431830 MtrunA17_Chr3g0144141 34.317 915 545 23 37 938 76 947 2.91e-166 512
Msa0431830 MtrunA17_Chr5g0407171 34.812 902 523 26 12 887 1 863 1.71e-163 505
Msa0431830 MtrunA17_Chr2g0322691 34.847 881 531 20 15 885 15 862 2.72e-163 504
Msa0431830 MtrunA17_Chr8g0370281 34.226 859 506 22 102 936 3 826 1.24e-155 481
Msa0431830 MtrunA17_Chr2g0322681 33.221 891 545 21 7 885 5 857 1.70e-154 480
Msa0431830 MtrunA17_Chr4g0046101 32.508 969 558 26 13 962 14 905 9.19e-152 473
Msa0431830 MtrunA17_Chr2g0283231 32.179 982 577 29 21 980 26 940 4.47e-149 467
Msa0431830 MtrunA17_Chr5g0424541 32.812 896 503 27 36 900 39 866 3.39e-131 419
Msa0431830 MtrunA17_Chr5g0424521 33.780 746 418 19 96 824 1 687 5.70e-116 372
Msa0431830 MtrunA17_Chr2g0283241 30.112 890 515 28 16 887 17 817 3.98e-110 363
Msa0431830 MtrunA17_Chr7g0230081 29.742 891 498 25 37 885 52 856 1.04e-108 359
Msa0431830 MtrunA17_Chr2g0283261 28.523 880 516 24 31 887 33 822 2.64e-108 357
Msa0431830 MtrunA17_Chr7g0230091 32.388 670 362 15 249 902 6 600 2.56e-102 334
Msa0431830 MtrunA17_Chr2g0283251 29.620 790 458 26 31 803 32 740 4.22e-92 310
Msa0431830 MtrunA17_Chr2g0283211 30.671 626 326 17 183 803 5 527 1.32e-83 280
Msa0431830 MtrunA17_Chr6g0467751 38.889 414 227 10 474 876 45 443 4.79e-83 277
Msa0431830 MtrunA17_Chr5g0424621 30.172 580 330 20 11 573 18 539 1.59e-62 222
Msa0431830 MtrunA17_Chr5g0424631 42.149 121 61 3 767 879 13 132 1.19e-19 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431830 AT2G29120.1 48.342 995 454 20 3 989 8 950 0.0 895
Msa0431830 AT2G29110.2 49.491 982 442 20 3 981 6 936 0.0 870
Msa0431830 AT2G29110.1 49.491 982 442 20 3 981 5 935 0.0 870
Msa0431830 AT2G29100.2 49.476 954 414 20 1 952 2 889 0.0 851
Msa0431830 AT2G29100.1 49.475 952 413 20 3 952 2 887 0.0 849
Msa0431830 AT2G24720.1 50.548 821 372 11 37 854 32 821 0.0 817
Msa0431830 AT5G27100.1 46.811 925 430 16 1 917 1 871 0.0 817
Msa0431830 AT5G11210.5 47.079 873 426 12 26 895 27 866 0.0 798
Msa0431830 AT2G24710.1 47.692 845 408 10 53 890 45 862 0.0 785
Msa0431830 AT2G24710.3 47.692 845 408 10 53 890 69 886 0.0 784
Msa0431830 AT5G11210.1 47.613 838 406 10 61 895 1 808 0.0 783
Msa0431830 AT5G11180.2 45.475 884 447 13 8 886 7 860 0.0 783
Msa0431830 AT4G31710.1 44.526 950 461 15 1 940 1 894 0.0 752
Msa0431830 AT5G11210.9 47.139 804 392 10 95 895 11 784 0.0 748
Msa0431830 AT4G31710.2 43.895 950 460 15 1 940 24 910 0.0 738
Msa0431830 AT2G24710.2 48.735 751 358 8 53 803 69 792 0.0 731
Msa0431830 AT5G11210.10 46.855 779 381 9 26 803 27 773 0.0 723
Msa0431830 AT5G11210.2 46.855 779 381 9 26 803 27 773 0.0 723
Msa0431830 AT5G11210.4 46.855 779 381 9 26 803 27 773 0.0 723
Msa0431830 AT5G11180.1 42.308 884 414 15 8 886 7 799 0.0 693
Msa0431830 AT5G11210.7 46.901 710 347 7 95 803 11 691 0.0 672
Msa0431830 AT5G11210.6 46.901 710 347 7 95 803 11 691 0.0 672
Msa0431830 AT5G11210.8 46.901 710 347 7 95 803 11 691 0.0 671
Msa0431830 AT5G11210.3 46.459 706 348 7 99 803 23 699 0.0 666
Msa0431830 AT1G42540.1 33.228 951 570 24 9 931 1 914 5.67e-168 516
Msa0431830 AT1G42540.4 33.228 951 570 24 9 931 1 914 5.67e-168 516
Msa0431830 AT1G42540.2 33.228 951 570 24 9 931 1 914 5.67e-168 516
Msa0431830 AT5G48400.2 35.321 889 486 24 31 911 34 841 1.80e-160 494
Msa0431830 AT3G07520.1 35.226 863 476 21 37 892 46 832 8.77e-160 493
Msa0431830 AT3G51480.4 33.080 922 560 22 36 948 29 902 2.78e-158 490
Msa0431830 AT3G51480.1 33.080 922 560 22 36 948 29 902 2.78e-158 490
Msa0431830 AT4G35290.4 33.368 953 562 29 7 934 6 910 2.45e-157 488
Msa0431830 AT4G35290.3 33.368 953 562 29 7 934 6 910 2.45e-157 488
Msa0431830 AT4G35290.1 33.368 953 562 29 7 934 6 910 2.45e-157 488
Msa0431830 AT4G35290.2 33.368 953 562 29 7 934 6 910 2.45e-157 488
Msa0431830 AT4G35290.5 33.368 953 562 29 7 934 6 910 2.45e-157 488
Msa0431830 AT5G48410.1 35.360 888 484 21 26 904 26 832 8.39e-157 485
Msa0431830 AT2G17260.1 34.211 912 547 26 36 929 33 909 1.74e-156 486
Msa0431830 AT1G05200.6 33.256 866 534 19 37 893 61 891 6.60e-156 486
Msa0431830 AT1G05200.2 33.256 866 534 19 37 893 61 891 6.60e-156 486
Msa0431830 AT1G05200.1 33.256 866 534 19 37 893 61 891 6.60e-156 486
Msa0431830 AT3G51480.2 33.958 854 511 19 103 948 4 812 2.43e-155 479
Msa0431830 AT2G32390.5 33.953 860 533 18 37 888 48 880 9.71e-152 474
Msa0431830 AT2G32390.2 35.206 801 487 16 95 888 3 778 2.44e-151 470
Msa0431830 AT2G32390.1 35.044 799 487 16 97 888 49 822 9.38e-150 468
Msa0431830 AT2G32400.1 32.548 934 554 24 36 942 30 914 3.29e-148 464
Msa0431830 AT5G48400.1 35.851 781 416 21 31 803 34 737 1.62e-144 449
Msa0431830 AT5G48410.2 36.086 787 416 19 26 803 26 734 9.45e-144 447
Msa0431830 AT5G48410.4 33.784 888 471 22 26 904 26 805 6.43e-141 442
Msa0431830 AT5G48410.3 33.559 888 469 22 26 904 26 801 1.24e-138 436
Msa0431830 AT1G05200.7 32.861 776 478 18 37 803 61 802 5.55e-134 424
Msa0431830 AT1G05200.3 32.861 776 478 18 37 803 61 802 5.55e-134 424
Msa0431830 AT3G51480.3 33.591 777 466 19 36 803 29 764 4.17e-132 417
Msa0431830 AT4G35290.6 33.825 813 475 25 7 803 6 771 8.21e-131 414
Msa0431830 AT3G04110.1 31.179 882 498 25 9 876 1 787 7.03e-124 397
Msa0431830 AT2G32390.6 33.127 646 399 16 37 675 48 667 2.36e-110 357
Msa0431830 AT3G04110.3 30.788 799 454 22 9 803 1 704 1.17e-109 357
Msa0431830 AT1G42540.3 31.845 672 410 17 9 666 1 638 1.07e-108 352
Msa0431830 AT5G11210.11 50.298 336 162 5 563 895 25 358 1.33e-106 338
Msa0431830 AT2G32390.4 32.810 637 395 16 37 666 48 658 1.54e-106 347
Msa0431830 AT2G32390.3 32.810 637 395 16 37 666 48 658 1.54e-106 347
Msa0431830 AT3G04110.2 29.138 882 488 25 9 876 1 759 7.54e-106 348
Msa0431830 AT1G05200.4 31.882 643 397 16 37 671 61 670 1.13e-103 339
Msa0431830 AT2G32390.7 32.166 628 393 16 37 657 48 649 4.45e-101 331
Msa0431830 AT1G05200.5 31.479 629 390 16 37 657 61 656 9.40e-98 323

Find 193 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTATTGTCTACATAAA+TGG 0.116036 3_2:+83899839 None:intergenic
GTGAAAAGAGAGTTGGATTT+TGG 0.161309 3_2:-83899125 Msa0431830:CDS
CTGAATCAGTTTGTGATATT+TGG 0.172292 3_2:+83899919 None:intergenic
TCCATTATATCGATCTTAAT+TGG 0.176789 3_2:+83904923 None:intergenic
ACCATGAATTTCAGAATTAT+TGG 0.177272 3_2:+83904890 None:intergenic
ACTCTCATTGTAATCAAATT+TGG 0.184403 3_2:+83899326 None:intergenic
ACATGTTATTATTGCCTATT+AGG 0.190238 3_2:+83899061 None:intergenic
TTTGATTCAGTTTGACTAAA+TGG 0.195482 3_2:+83896585 None:intergenic
GTCTTGGACTTGAAAGCTTT+TGG 0.195866 3_2:-83896881 Msa0431830:CDS
TTTGTTTCTATTGTTGTTAT+TGG 0.212936 3_2:+83900038 None:intergenic
TGGGGTCTGTTTCTCATTGC+AGG 0.213239 3_2:-83896861 Msa0431830:CDS
TTGTCAAACACTAGATTTAA+TGG 0.214752 3_2:-83899225 Msa0431830:CDS
ACAAATTTCGTGATTCAATT+AGG 0.223801 3_2:-83900020 Msa0431830:CDS
TAAAGGGCTATCTCGAAATT+TGG 0.225943 3_2:-83899094 Msa0431830:CDS
TGTCTCCTTGAGTTACATTT+AGG 0.234397 3_2:+83896982 None:intergenic
CAAAGATTACGAGTGCTAAT+AGG 0.237260 3_2:+83896829 None:intergenic
CCCTATATTAAGCACTTTCT+TGG 0.239631 3_2:-83897466 Msa0431830:CDS
TCATCTAGTTTCTTTGTTCT+AGG 0.242984 3_2:+83899489 None:intergenic
TTTCGAGATAGCCCTTTATT+TGG 0.244126 3_2:+83899099 None:intergenic
AGCCACTCACATGGGATCTT+TGG 0.252189 3_2:-83898449 Msa0431830:CDS
TTTATAAAAGGAAGTGTAAA+TGG 0.252930 3_2:-83897517 Msa0431830:CDS
AAGTTTGGTATTTCACAAAA+TGG 0.258351 3_2:-83899267 Msa0431830:CDS
GTAGGCATGTTGAAGAAAAT+TGG 0.262855 3_2:+83899791 None:intergenic
TGTTCATTGGATTTGTTGTT+TGG 0.263168 3_2:-83898404 Msa0431830:CDS
TATTGAAGTACTTGGACTAT+TGG 0.263429 3_2:+83896767 None:intergenic
ACCTCAACTATCCTAGCTTT+TGG 0.264923 3_2:-83899879 Msa0431830:CDS
TCCAATTAAGATCGATATAA+TGG 0.287675 3_2:-83904924 Msa0431830:exon
GCATGTTCATTTGTGTTCAT+TGG 0.291980 3_2:-83898417 Msa0431830:CDS
GGATGGGAAATTCCTACTAT+TGG 0.294555 3_2:-83898973 Msa0431830:CDS
GTGCACATGTCACCAATTCT+AGG 0.300256 3_2:-83899663 Msa0431830:CDS
AGTCCTCATCATGATGATTT+AGG 0.305156 3_2:-83896648 Msa0431830:CDS
CAAGATTTGTGGTGGTTGTA+TGG 0.309269 3_2:-83897765 Msa0431830:CDS
AAACTATTGTCTACATAAAT+GGG 0.309910 3_2:+83899840 None:intergenic
TGTGATATTTGGAAGAAGTA+TGG 0.310744 3_2:+83899930 None:intergenic
CGATGAGTTGGATTCTAGTT+TGG 0.312892 3_2:+83904687 None:intergenic
GCCACAAGAGGTGAGCCTTT+TGG 0.314803 3_2:+83897023 None:intergenic
ATCAGATTGGCACAAGCTTA+TGG 0.317813 3_2:-83898335 Msa0431830:CDS
AGATTTAAAACTGGTGGCTT+TGG 0.326155 3_2:-83897406 Msa0431830:CDS
ATAGAATAAACAATGATTTC+AGG 0.330201 3_2:-83898371 Msa0431830:CDS
AAGAGAAATTGCACTTAGAT+AGG 0.330576 3_2:+83899758 None:intergenic
CGTCTCCATATTGAAGTACT+TGG 0.331856 3_2:+83896759 None:intergenic
ATTGAAGTACTTGGACTATT+GGG 0.335080 3_2:+83896768 None:intergenic
TTGGACACAGAAGGCCTAAT+AGG 0.347096 3_2:-83899075 Msa0431830:CDS
TCCAAGAAAGTGCTTAATAT+AGG 0.347975 3_2:+83897465 None:intergenic
AAAGATTACGAGTGCTAATA+GGG 0.352188 3_2:+83896830 None:intergenic
CTCTTGTGGCTGACATTTCA+AGG 0.353545 3_2:-83897010 Msa0431830:CDS
TGGAAGGAGTGTTGGGTGTT+AGG 0.354875 3_2:-83899521 Msa0431830:CDS
TCCAATAATTCTGAAATTCA+TGG 0.354982 3_2:-83904891 Msa0431830:CDS
TTGGTGTCTAGTTAATCTTT+TGG 0.358808 3_2:-83904861 Msa0431830:CDS
ACAACATCCAATTCTGTGTT+TGG 0.359057 3_2:+83896537 None:intergenic
ATTTATGTAGACAATAGTTT+TGG 0.361139 3_2:-83899837 Msa0431830:CDS
CCAAGAAAGTGCTTAATATA+GGG 0.362025 3_2:+83897466 None:intergenic
GCTATTGAGAAAGTTGGAAT+TGG 0.368469 3_2:-83899354 Msa0431830:CDS
TCATCGTAAGGGATTCTCAT+AGG 0.372730 3_2:-83904670 Msa0431830:CDS
AAATGTGTTTGTGTTGATAT+AGG 0.376139 3_2:+83896796 None:intergenic
GCCACTCACATGGGATCTTT+GGG 0.377419 3_2:-83898448 Msa0431830:CDS
GTTCATTGGATTTGTTGTTT+GGG 0.383921 3_2:-83898403 Msa0431830:CDS
AATGGAACTGTTGGGAAGAT+AGG 0.385537 3_2:-83904764 Msa0431830:CDS
CCATGTGAGTGGCTTCAAAA+AGG 0.389028 3_2:+83898458 None:intergenic
TATATCAACACAAACACATT+TGG 0.390638 3_2:-83896794 Msa0431830:CDS
CATTGTTTATTCTATGTTCA+AGG 0.390884 3_2:+83898379 None:intergenic
ACTAGATTTAATGGTCTTAG+TGG 0.396942 3_2:-83899216 Msa0431830:CDS
CAGATGATATCAAGTTGCTT+GGG 0.397167 3_2:+83896464 None:intergenic
TGAAGGGCTTGTTGCTGAAA+AGG 0.397820 3_2:+83899971 None:intergenic
TTGAGCGATCAACTCATTGT+AGG 0.399010 3_2:+83898747 None:intergenic
TGATGAGTCAAGGCTATGTT+TGG 0.402077 3_2:-83899605 Msa0431830:CDS
TGTTGTACAAATTACTAATC+AGG 0.405019 3_2:-83896520 Msa0431830:CDS
GATGGGAAATTCCTACTATT+GGG 0.406766 3_2:-83898972 Msa0431830:CDS
AAAAGTTTAGAGCCTAGAAT+TGG 0.410550 3_2:+83899651 None:intergenic
GTAGGAATTTCCCATCCCTT+TGG 0.420382 3_2:+83898979 None:intergenic
GGTGCAGTTGAGGCCTCTCC+AGG 0.420692 3_2:-83896627 Msa0431830:CDS
GTTGAACCAAGATTTAAAAC+TGG 0.428995 3_2:-83897415 Msa0431830:CDS
GCCAGTGGCTTGTGTTGAAT+TGG 0.433601 3_2:+83898870 None:intergenic
ATAGTCCAAGTACTTCAATA+TGG 0.433958 3_2:-83896764 Msa0431830:CDS
ATGATCTTGGGTCAATCATA+TGG 0.436476 3_2:-83899023 Msa0431830:CDS
ACAATGCCATACACAGAATC+TGG 0.438361 3_2:-83898531 Msa0431830:CDS
TCCAAAAGGCTCACCTCTTG+TGG 0.438397 3_2:-83897024 Msa0431830:CDS
CTCAATTTCTTCCCAATAGT+AGG 0.438788 3_2:+83898961 None:intergenic
CTACTATTGGGAAGAAATTG+AGG 0.438903 3_2:-83898960 Msa0431830:CDS
GGGGTCTGTTTCTCATTGCA+GGG 0.440200 3_2:-83896860 Msa0431830:CDS
TCATCTTATTCTTTAGAAGT+TGG 0.441150 3_2:+83897647 None:intergenic
GAGTAATATTGTAGTGAAAG+TGG 0.450926 3_2:-83904810 Msa0431830:CDS
CAGAAATTTGATGCGGTAGT+GGG 0.453072 3_2:-83898597 Msa0431830:CDS
AAGTCCAAGACTGTTATTTG+AGG 0.455461 3_2:+83896893 None:intergenic
AAGTCATATGGTAAGGCATA+AGG 0.455526 3_2:+83898808 None:intergenic
GTAATTGATGTTAGCAGTAA+TGG 0.457003 3_2:-83904782 Msa0431830:CDS
GCAAATCGAACAAAGTCATA+TGG 0.457326 3_2:+83898796 None:intergenic
GCAGATGATATCAAGTTGCT+TGG 0.459394 3_2:+83896463 None:intergenic
TGAAGAAGTGCAAGCCATCA+TGG 0.461043 3_2:-83900063 Msa0431830:CDS
AAATTTGTGTCAACAAGTGT+TGG 0.461667 3_2:+83899426 None:intergenic
ATTTCCTCAAATAACAGTCT+TGG 0.466717 3_2:-83896897 Msa0431830:CDS
ACAGAAATTTGATGCGGTAG+TGG 0.468808 3_2:-83898598 Msa0431830:intron
GTTCCTGCCATCTCACCATC+AGG 0.472388 3_2:+83898769 None:intergenic
TGAAATTCATGGTTACTTGT+TGG 0.473891 3_2:-83904880 Msa0431830:CDS
TTACTTTCACAGTTATTCAC+AGG 0.477586 3_2:+83896489 None:intergenic
TAGAATAAACAATGATTTCA+GGG 0.480077 3_2:-83898370 Msa0431830:CDS
AAGATTTGTGGTGGTTGTAT+GGG 0.480530 3_2:-83897764 Msa0431830:CDS
AGTAATATTGTAGTGAAAGT+GGG 0.481193 3_2:-83904809 Msa0431830:CDS
GGAATCAATGGAAGGAGTGT+TGG 0.481226 3_2:-83899529 Msa0431830:CDS
GTCACACCAGATTCTGTGTA+TGG 0.482816 3_2:+83898525 None:intergenic
TGGACTAAAATCGTCATTCA+AGG 0.483119 3_2:+83896557 None:intergenic
AGATATTATATGAGAAGAAG+AGG 0.483741 3_2:+83898708 None:intergenic
GAAGAAGTGCAAGCCATCAT+GGG 0.487721 3_2:-83900062 Msa0431830:CDS
GAATCAATGGAAGGAGTGTT+GGG 0.489443 3_2:-83899528 Msa0431830:CDS
TATGAGATAATTAATGTGAT+TGG 0.490156 3_2:-83899153 Msa0431830:CDS
CTAGAATCCAACTCATCGTA+AGG 0.492390 3_2:-83904682 Msa0431830:CDS
TTGTTTCAATGAAAGACAAC+AGG 0.492606 3_2:-83898497 Msa0431830:CDS
GCAATGGCTATTGAGAAAGT+TGG 0.497583 3_2:-83899360 Msa0431830:CDS
GCTTGTGTTGAATTGGTACT+AGG 0.497766 3_2:+83898877 None:intergenic
ATGGAGACGAATTCGCGTCT+TGG 0.498921 3_2:-83896745 Msa0431830:CDS
GAGAATCCCTTACGATGAGT+TGG 0.498988 3_2:+83904675 None:intergenic
GTTGCTGAAAAGGTTACAAT+GGG 0.513038 3_2:+83899981 None:intergenic
TGATCGCTCAACTTTACGAC+GGG 0.518428 3_2:-83898735 Msa0431830:CDS
GGTGATGGTGAAAAGAGAGT+TGG 0.519922 3_2:-83899132 Msa0431830:CDS
CTTGTTTCCATCCAAAAGCT+AGG 0.520602 3_2:+83899868 None:intergenic
GAGTAACTTGGCAAGATTTG+TGG 0.524831 3_2:-83897776 Msa0431830:CDS
TGTACTCTATTCCAAAGGGA+TGG 0.525388 3_2:-83898990 Msa0431830:CDS
TGAAGAAAATTGGTTAAACA+TGG 0.527626 3_2:+83899801 None:intergenic
TGTTGTTATTGGCCCCATGA+TGG 0.531560 3_2:+83900049 None:intergenic
TGGTGTACGTCTGTAATAGC+TGG 0.533257 3_2:+83897667 None:intergenic
CTTGGGTCAATCATATGGCC+AGG 0.534459 3_2:-83899018 Msa0431830:CDS
TTGGATAGTAACCGATGGTA+TGG 0.535162 3_2:-83899586 Msa0431830:CDS
CTAGGTGGACAATGTGTACC+TGG 0.535744 3_2:+83896609 None:intergenic
TAGATAGGGAACTTGAATGT+AGG 0.538157 3_2:+83899773 None:intergenic
TCGAACAAAGTCATATGGTA+AGG 0.538162 3_2:+83898801 None:intergenic
TCTTGACAGTTGAACAACTA+AGG 0.538252 3_2:-83897690 Msa0431830:CDS
AGAGAAATTGCACTTAGATA+GGG 0.538426 3_2:+83899759 None:intergenic
AGCTAGGATAGTTGAGGTGA+TGG 0.540259 3_2:+83899884 None:intergenic
GGACCACTCTCTCATCAGAT+TGG 0.543596 3_2:-83898348 Msa0431830:CDS
TGAAAACAATTGAGAATGCA+TGG 0.545171 3_2:-83896956 Msa0431830:CDS
TCAGTTTGACTAAATGGACT+AGG 0.546319 3_2:+83896591 None:intergenic
GTTAGCAGTAATGGAACTGT+TGG 0.546757 3_2:-83904773 Msa0431830:CDS
AAATACTCTAGTGGGTATAG+TGG 0.546761 3_2:+83899689 None:intergenic
CATCGTAAGGGATTCTCATA+GGG 0.551334 3_2:-83904669 Msa0431830:CDS
TGTTGCTGAAAAGGTTACAA+TGG 0.553660 3_2:+83899980 None:intergenic
AGCATAGACCATAGTTGAGA+AGG 0.554038 3_2:+83898308 None:intergenic
GTACTCTATTCCAAAGGGAT+GGG 0.554830 3_2:-83898989 Msa0431830:CDS
AGATGATATCAAGTTGCTTG+GGG 0.557329 3_2:+83896465 None:intergenic
TTAGCAGTAATGGAACTGTT+GGG 0.557392 3_2:-83904772 Msa0431830:CDS
GATATGTACTCTATTCCAAA+GGG 0.559793 3_2:-83898994 Msa0431830:CDS
AGAAATTTGATGCGGTAGTG+GGG 0.561352 3_2:-83898596 Msa0431830:CDS
GAACCAAGATTTAAAACTGG+TGG 0.563610 3_2:-83897412 Msa0431830:CDS
AAGCCTGATGGTGAGATGGC+AGG 0.567308 3_2:-83898772 Msa0431830:CDS
TGATGATTTAGGTGCAGTTG+AGG 0.570409 3_2:-83896637 Msa0431830:CDS
CTAAAGAATAAGATGAATGT+CGG 0.571534 3_2:-83897640 Msa0431830:CDS
GCAATCCTAAATGTAACTCA+AGG 0.574917 3_2:-83896987 Msa0431830:CDS
TAGTTGTTCAAAGTATGTCA+TGG 0.581001 3_2:-83897437 Msa0431830:CDS
AGAGAAAGTAGTGAGTAACT+TGG 0.583063 3_2:-83897788 Msa0431830:CDS
GTGCACAACAAATACTCTAG+TGG 0.583204 3_2:+83899680 None:intergenic
TCTCACACATTCAAGAAGAG+TGG 0.586440 3_2:-83896693 Msa0431830:CDS
TTTGAAGTGATGCAAGTGAA+GGG 0.587775 3_2:+83899955 None:intergenic
ATAAAAGGAAGTGTAAATGG+TGG 0.589834 3_2:-83897514 Msa0431830:CDS
TGCACAACAAATACTCTAGT+GGG 0.590633 3_2:+83899681 None:intergenic
TCTTGTGGCTGACATTTCAA+GGG 0.591221 3_2:-83897009 Msa0431830:CDS
ATGAATGTCGGCTATCTCAA+AGG 0.594170 3_2:-83897628 Msa0431830:CDS
ATAATTAATGTGATTGGTGA+TGG 0.594746 3_2:-83899147 Msa0431830:CDS
TGCTACAATTGCATTAGCAA+TGG 0.595360 3_2:-83899376 Msa0431830:CDS
GTTCGATTTGCAAAGCCTGA+TGG 0.595979 3_2:-83898784 Msa0431830:CDS
ATTGGGAAGAAATTGAGGAT+AGG 0.598398 3_2:-83898955 Msa0431830:CDS
GAATAAATTAGCCATACCAT+CGG 0.598751 3_2:+83899575 None:intergenic
ACCAATTCAACACAAGCCAC+TGG 0.599399 3_2:-83898871 Msa0431830:CDS
GATGTGAGGGAATCAATGGA+AGG 0.606194 3_2:-83899537 Msa0431830:CDS
TGCAAAGCCTGATGGTGAGA+TGG 0.606948 3_2:-83898776 Msa0431830:CDS
TGATATGTACTCTATTCCAA+AGG 0.607721 3_2:-83898995 Msa0431830:CDS
CTTGAAATGTCAGCCACAAG+AGG 0.613113 3_2:+83897011 None:intergenic
TAGAATCCAACTCATCGTAA+GGG 0.616584 3_2:-83904681 Msa0431830:CDS
TCTCGAAATTTGGACACAGA+AGG 0.618566 3_2:-83899084 Msa0431830:CDS
TACTTTCACAGTTATTCACA+GGG 0.620593 3_2:+83896490 None:intergenic
GTCGTCACTGCAGCTGCACA+CGG 0.622767 3_2:-83904644 Msa0431830:intron
GAAATTTGATGCGGTAGTGG+GGG 0.623597 3_2:-83898595 Msa0431830:CDS
AACTATTGTCTACATAAATG+GGG 0.625124 3_2:+83899841 None:intergenic
AAAATAGGGATGATGAGTCA+AGG 0.626352 3_2:-83899615 Msa0431830:CDS
GGAATAGAGTACATATCACC+TGG 0.626804 3_2:+83899000 None:intergenic
CACAGAATCTGGTGTGACAA+TGG 0.627498 3_2:-83898520 Msa0431830:CDS
TCCAAAAGCTAGGATAGTTG+AGG 0.631469 3_2:+83899878 None:intergenic
CTTTGAAGTGATGCAAGTGA+AGG 0.639660 3_2:+83899954 None:intergenic
TAACTTGGCAAGATTTGTGG+TGG 0.641212 3_2:-83897773 Msa0431830:CDS
ACCCAAAGATCCCATGTGAG+TGG 0.641569 3_2:+83898447 None:intergenic
TGGACAATGTGTACCTGGAG+AGG 0.642774 3_2:+83896614 None:intergenic
AGAATAAACAATGATTTCAG+GGG 0.643917 3_2:-83898369 Msa0431830:CDS
GTGCCAATCTGATGAGAGAG+TGG 0.645474 3_2:+83898345 None:intergenic
GCACCTAAATCATCATGATG+AGG 0.648662 3_2:+83896645 None:intergenic
AAGAAGTGCAAGCCATCATG+GGG 0.657278 3_2:-83900061 Msa0431830:CDS
GTTTGACTAAATGGACTAGG+TGG 0.658046 3_2:+83896594 None:intergenic
GATATCAATGCAGAAGCCAG+TGG 0.660734 3_2:+83898855 None:intergenic
TATGTTTGGATAGTAACCGA+TGG 0.661801 3_2:-83899591 Msa0431830:CDS
ATATAACAATCACTGCAAGT+AGG 0.665993 3_2:-83898572 Msa0431830:CDS
TTGAGTGATAGCATCATCTG+TGG 0.666467 3_2:+83899731 None:intergenic
TTGATCGCTCAACTTTACGA+CGG 0.681279 3_2:-83898736 Msa0431830:CDS
GATGATATCAAGTTGCTTGG+GGG 0.683408 3_2:+83896466 None:intergenic
GGATTGACAGAAATTTGATG+CGG 0.685801 3_2:-83898604 Msa0431830:intron
ACTTTCACAGTTATTCACAG+GGG 0.742375 3_2:+83896491 None:intergenic
GATCGCTCAACTTTACGACG+GGG 0.742491 3_2:-83898734 Msa0431830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATAACTTTTCA+CGG + chr3_2:83897017-83897036 None:intergenic 10.0%
!! AATTTATAAACTTGATATTA+AGG - chr3_2:83897720-83897739 Msa0431830:CDS 10.0%
!!! AAATCATATTTCTATAAAAA+CGG - chr3_2:83899338-83899357 Msa0431830:CDS 10.0%
!! TTTCATACAAAAAAAAAAAA+AGG + chr3_2:83899600-83899619 None:intergenic 10.0%
!!! TTTTTTTTTTTTGTATGAAA+TGG - chr3_2:83899600-83899619 Msa0431830:CDS 10.0%
!!! CCTTTATTTTTAAAATATTT+GGG + chr3_2:83899732-83899751 None:intergenic 10.0%
!!! CCAAATATTTTAAAAATAAA+GGG - chr3_2:83899730-83899749 Msa0431830:CDS 10.0%
!!! AAGAATGAAAAAAATTATTT+TGG - chr3_2:83902786-83902805 Msa0431830:intron 10.0%
!!! AATTAAGATTTTATTCATAT+AGG - chr3_2:83903177-83903196 Msa0431830:intron 10.0%
!!! TTTTAAAAATAAGATCAAAA+TGG - chr3_2:83904099-83904118 Msa0431830:intron 10.0%
! GGGCGGGGGCGGGGGCGGGG+CGG - chr3_2:83898466-83898485 Msa0431830:CDS 100.0%
! GGCGGGGGCGGGGGCGGGGC+GGG - chr3_2:83898467-83898486 Msa0431830:CDS 100.0%
!!! TTTTTTTTATAACTTTTCAC+GGG + chr3_2:83897016-83897035 None:intergenic 15.0%
!!! AGTTTTTGTAATGATTTTAT+AGG + chr3_2:83897105-83897124 None:intergenic 15.0%
!!! TAACTTTTATTTTTCAACAT+AGG + chr3_2:83897419-83897438 None:intergenic 15.0%
!! TAATAAAAACACATGTTATT+AGG + chr3_2:83898016-83898035 None:intergenic 15.0%
!! AACAAATTCATATCAAATAA+CGG - chr3_2:83898055-83898074 Msa0431830:intron 15.0%
!! GTTAAAATATGTGTTAAAAA+GGG + chr3_2:83898761-83898780 None:intergenic 15.0%
!! AGTTAAAATATGTGTTAAAA+AGG + chr3_2:83898762-83898781 None:intergenic 15.0%
!!! AAAAAAGTGTAAATACTTTA+AGG + chr3_2:83898942-83898961 None:intergenic 15.0%
!!! TTGAATGTGTATTTTTTTAT+AGG + chr3_2:83898980-83898999 None:intergenic 15.0%
!! AAAAAAATACACATTCAAAT+TGG - chr3_2:83898982-83899001 Msa0431830:CDS 15.0%
!!! CCCAAATATTTTAAAAATAA+AGG - chr3_2:83899729-83899748 Msa0431830:CDS 15.0%
!!! CCCTTTATTTTTAAAATATT+TGG + chr3_2:83899733-83899752 None:intergenic 15.0%
!! CATGATTTATCAAATAATAA+GGG + chr3_2:83899833-83899852 None:intergenic 15.0%
!! ACATGATTTATCAAATAATA+AGG + chr3_2:83899834-83899853 None:intergenic 15.0%
!!! TGTTTCTTTCTTTTATTTTT+GGG + chr3_2:83900598-83900617 None:intergenic 15.0%
!!! TTTTTTCATTCTTTTCATTT+TGG + chr3_2:83902779-83902798 None:intergenic 15.0%
!!! TAAATTAAATTTGTTCAAGT+TGG - chr3_2:83903369-83903388 Msa0431830:intron 15.0%
!!! CAATGATAATATTGTTATTA+GGG + chr3_2:83904065-83904084 None:intergenic 15.0%
!! ACATGTTTATTTCCATAATT+AGG - chr3_2:83897655-83897674 Msa0431830:CDS 20.0%
!! CAAACATAATTTCCTAATTA+TGG + chr3_2:83897670-83897689 None:intergenic 20.0%
!! CATAATTAGGAAATTATGTT+TGG - chr3_2:83897668-83897687 Msa0431830:CDS 20.0%
!! TAGGTATCAAATAGATAAAA+AGG - chr3_2:83897842-83897861 Msa0431830:intron 20.0%
!! ACAAGATGATATAAAGATTT+AGG - chr3_2:83897913-83897932 Msa0431830:intron 20.0%
!!! TTACTTATTTTCTCTGTTAT+CGG + chr3_2:83898221-83898240 None:intergenic 20.0%
!!! TTATTTTCCTTAAATTAGAC+GGG + chr3_2:83898413-83898432 None:intergenic 20.0%
!!! CTTATTTTCCTTAAATTAGA+CGG + chr3_2:83898414-83898433 None:intergenic 20.0%
!! GTCTAATTTAAGGAAAATAA+GGG - chr3_2:83898413-83898432 Msa0431830:CDS 20.0%
!! ATAGAAAAAACAATGTCAAT+GGG - chr3_2:83899380-83899399 Msa0431830:CDS 20.0%
!!! TAGTCATACATGATTTTTAA+TGG + chr3_2:83899650-83899669 None:intergenic 20.0%
!!! TACATTGAGAAAAAGTATAA+TGG + chr3_2:83899893-83899912 None:intergenic 20.0%
!! ATATAAGATCTTAAACCTAA+GGG + chr3_2:83900095-83900114 None:intergenic 20.0%
!! TATATAAGATCTTAAACCTA+AGG + chr3_2:83900096-83900115 None:intergenic 20.0%
!! TATTGGTAGATTTGAATAAA+AGG + chr3_2:83900157-83900176 None:intergenic 20.0%
!!! AATGATTTTTCGAAAAATAG+AGG - chr3_2:83900523-83900542 Msa0431830:intron 20.0%
!!! ATGATTTTTCGAAAAATAGA+GGG - chr3_2:83900524-83900543 Msa0431830:intron 20.0%
!!! CTGTTTCTTTCTTTTATTTT+TGG + chr3_2:83900599-83900618 None:intergenic 20.0%
!! TGTATTTAGTATTTACCTTA+CGG - chr3_2:83900707-83900726 Msa0431830:intron 20.0%
!! ATTTCTCTTACTTTATTACT+AGG - chr3_2:83900981-83901000 Msa0431830:intron 20.0%
!!! AAAATCTTGTAGTGTTTTTT+TGG + chr3_2:83901040-83901059 None:intergenic 20.0%
!! TAACATTTCATTAAGAGAAT+AGG + chr3_2:83901290-83901309 None:intergenic 20.0%
!!! TTTGTTTCTATTGTTGTTAT+TGG + chr3_2:83901376-83901395 None:intergenic 20.0%
!! AAACTATTGTCTACATAAAT+GGG + chr3_2:83901574-83901593 None:intergenic 20.0%
!! AAAACTATTGTCTACATAAA+TGG + chr3_2:83901575-83901594 None:intergenic 20.0%
!!! ATTTATGTAGACAATAGTTT+TGG - chr3_2:83901574-83901593 Msa0431830:intron 20.0%
!! TTTACCTTAGCAAAAAAAAT+AGG - chr3_2:83901781-83901800 Msa0431830:intron 20.0%
!! TTACCTTAGCAAAAAAAATA+GGG - chr3_2:83901782-83901801 Msa0431830:intron 20.0%
!!! ATTTGAACATTTTTGGAATA+TGG - chr3_2:83902004-83902023 Msa0431830:intron 20.0%
!!! TTTGAACATTTTTGGAATAT+GGG - chr3_2:83902005-83902024 Msa0431830:intron 20.0%
!!! ATACCAAACTTTTCAAAATT+AGG + chr3_2:83902135-83902154 None:intergenic 20.0%
!! TATGAGATAATTAATGTGAT+TGG - chr3_2:83902258-83902277 Msa0431830:intron 20.0%
!!! TAGTTAAATCCATTTTTAAC+TGG + chr3_2:83902486-83902505 None:intergenic 20.0%
!! GAATCATTAACATATATAAC+AGG + chr3_2:83902732-83902751 None:intergenic 20.0%
!! ATAGAATAAACAATGATTTC+AGG - chr3_2:83903040-83903059 Msa0431830:intron 20.0%
!! TAGAATAAACAATGATTTCA+GGG - chr3_2:83903041-83903060 Msa0431830:intron 20.0%
!! GTGTAAAAACTTTAAACTTT+CGG + chr3_2:83903203-83903222 None:intergenic 20.0%
!! TCATAACAGTTACATTATTA+AGG - chr3_2:83903233-83903252 Msa0431830:intron 20.0%
!! CATAACAGTTACATTATTAA+GGG - chr3_2:83903234-83903253 Msa0431830:intron 20.0%
!!! TTGAACAAATTTAATTTACG+TGG + chr3_2:83903367-83903386 None:intergenic 20.0%
!!! TTTTGTTTATGGAATTTTGA+AGG - chr3_2:83903809-83903828 Msa0431830:intron 20.0%
!!! TGTAATGAGCTTTTTATAAA+AGG - chr3_2:83903882-83903901 Msa0431830:intron 20.0%
!!! TTTATAAAAGGAAGTGTAAA+TGG - chr3_2:83903894-83903913 Msa0431830:intron 20.0%
!!! GCAATGATAATATTGTTATT+AGG + chr3_2:83904066-83904085 None:intergenic 20.0%
!!! TTTTTAAAACATTGATCAGA+AGG + chr3_2:83904088-83904107 None:intergenic 20.0%
!!! GATCAGTTTTTTTAAAACAT+TGG - chr3_2:83904319-83904338 Msa0431830:intron 20.0%
! TCCAATTAAGATCGATATAA+TGG - chr3_2:83896487-83896506 Msa0431830:CDS 25.0%
! TCCATTATATCGATCTTAAT+TGG + chr3_2:83896491-83896510 None:intergenic 25.0%
!!! TCCAATAATTCTGAAATTCA+TGG - chr3_2:83896520-83896539 Msa0431830:CDS 25.0%
! ACCATGAATTTCAGAATTAT+TGG + chr3_2:83896524-83896543 None:intergenic 25.0%
! AGTAATATTGTAGTGAAAGT+GGG - chr3_2:83896602-83896621 Msa0431830:CDS 25.0%
!!! CTTTAGTTAACTTGTTCAAT+TGG + chr3_2:83897331-83897350 None:intergenic 25.0%
!!! TTTTTTACTGATGATGATGA+AGG + chr3_2:83897494-83897513 None:intergenic 25.0%
! TCATAACTTAAAAGCAATCA+TGG - chr3_2:83897751-83897770 Msa0431830:CDS 25.0%
! TAAAGATTTAGGAAATAGCA+TGG - chr3_2:83897924-83897943 Msa0431830:intron 25.0%
! TTAAGTGCACATACATATAT+GGG + chr3_2:83897961-83897980 None:intergenic 25.0%
! TAACAGAGATGAAAAATTGA+AGG - chr3_2:83898249-83898268 Msa0431830:intron 25.0%
! TGAAAAATTGAAGGAAGAAA+TGG - chr3_2:83898258-83898277 Msa0431830:intron 25.0%
! AAAGGAAAATAAGGAAAACA+AGG - chr3_2:83898359-83898378 Msa0431830:CDS 25.0%
! AAGGAAAATAAGGAAAACAA+GGG - chr3_2:83898360-83898379 Msa0431830:CDS 25.0%
!! TATTTTCCTTAAATTAGACG+GGG + chr3_2:83898412-83898431 None:intergenic 25.0%
! CGTCTAATTTAAGGAAAATA+AGG - chr3_2:83898412-83898431 Msa0431830:CDS 25.0%
! TAAGGAAAATAAGGGTAATA+AGG - chr3_2:83898421-83898440 Msa0431830:CDS 25.0%
! ATAAGGTAAATTTGCATGTA+CGG - chr3_2:83898438-83898457 Msa0431830:CDS 25.0%
! ATATATGGAGTATATAGACA+TGG + chr3_2:83898638-83898657 None:intergenic 25.0%
! GTGTGTGTAAATGTTAATTT+CGG - chr3_2:83898663-83898682 Msa0431830:intron 25.0%
!! ACATTTAATTTCCTTGAATC+TGG - chr3_2:83898710-83898729 Msa0431830:CDS 25.0%
!! GTGTAAATACTTTAAGGATA+TGG + chr3_2:83898936-83898955 None:intergenic 25.0%
!!! TTGTGAGTTTGCTTTTATTT+AGG + chr3_2:83899065-83899084 None:intergenic 25.0%
! AATAATGTTGTAAAAGACGA+CGG - chr3_2:83899267-83899286 Msa0431830:CDS 25.0%
! GATAGAAAAAACAATGTCAA+TGG - chr3_2:83899379-83899398 Msa0431830:CDS 25.0%
!!! TATCTTTTTTTCTCATCCAT+TGG + chr3_2:83899446-83899465 None:intergenic 25.0%
!!! TATCTTTTTTTCTCATCCAT+TGG + chr3_2:83899446-83899465 None:intergenic 25.0%
! TTACATTTGCATAAACTTCA+GGG + chr3_2:83899773-83899792 None:intergenic 25.0%
! GATTTATCAAATAATAAGGG+AGG + chr3_2:83899830-83899849 None:intergenic 25.0%
!!! TACTTTTTCTCAATGTAAAG+AGG - chr3_2:83899896-83899915 Msa0431830:CDS 25.0%
! TTCCTTAGAAAACTAACAAA+AGG - chr3_2:83899983-83900002 Msa0431830:CDS 25.0%
!!! TTCCTTTTGTTAGTTTTCTA+AGG + chr3_2:83899988-83900007 None:intergenic 25.0%
!!! GTAATTAATTTGCTTAACAG+TGG - chr3_2:83900066-83900085 Msa0431830:CDS 25.0%
! AATTTAGCAATTGATGTGAA+TGG - chr3_2:83900269-83900288 Msa0431830:intron 25.0%
!!! AGATTGGTTTTTTGAGAAAA+AGG - chr3_2:83900337-83900356 Msa0431830:intron 25.0%
!!! TTTATTGATTCACTTCCTTT+GGG - chr3_2:83900403-83900422 Msa0431830:intron 25.0%
!!! TGATTTTTCGAAAAATAGAG+GGG - chr3_2:83900525-83900544 Msa0431830:intron 25.0%
! TTGTATTTACATTAACCTCA+GGG - chr3_2:83900555-83900574 Msa0431830:intron 25.0%
! GTATTTAGTATTTACCTTAC+GGG - chr3_2:83900708-83900727 Msa0431830:intron 25.0%
! TCTCGTTCAATTCAATTAAA+TGG - chr3_2:83900780-83900799 Msa0431830:intron 25.0%
! ATATTGTATTGTATTGTGTG+TGG + chr3_2:83901085-83901104 None:intergenic 25.0%
! GCAAATATACAATGTTAATG+GGG + chr3_2:83901268-83901287 None:intergenic 25.0%
! GGCAAATATACAATGTTAAT+GGG + chr3_2:83901269-83901288 None:intergenic 25.0%
! AGGCAAATATACAATGTTAA+TGG + chr3_2:83901270-83901289 None:intergenic 25.0%
! ACAAATTTCGTGATTCAATT+AGG - chr3_2:83901391-83901410 Msa0431830:intron 25.0%
! AACTATTGTCTACATAAATG+GGG + chr3_2:83901573-83901592 None:intergenic 25.0%
! TGAAGAAAATTGGTTAAACA+TGG + chr3_2:83901613-83901632 None:intergenic 25.0%
!!! TAGATGATTTTAGAGTTAGA+TGG - chr3_2:83901938-83901957 Msa0431830:intron 25.0%
!! GACACAAATTTGAACATTTT+TGG - chr3_2:83901997-83902016 Msa0431830:intron 25.0%
! ACTCTCATTGTAATCAAATT+TGG + chr3_2:83902088-83902107 None:intergenic 25.0%
!!! ATGCCTAATTTTGAAAAGTT+TGG - chr3_2:83902129-83902148 Msa0431830:intron 25.0%
! AAGTTTGGTATTTCACAAAA+TGG - chr3_2:83902144-83902163 Msa0431830:intron 25.0%
! TTGTCAAACACTAGATTTAA+TGG - chr3_2:83902186-83902205 Msa0431830:intron 25.0%
! ATAATTAATGTGATTGGTGA+TGG - chr3_2:83902264-83902283 Msa0431830:intron 25.0%
! ACATGTTATTATTGCCTATT+AGG + chr3_2:83902353-83902372 None:intergenic 25.0%
!!! TCTAGTTCTAAAAATGATCT+TGG - chr3_2:83902375-83902394 Msa0431830:intron 25.0%
!!! CTAGTTCTAAAAATGATCTT+GGG - chr3_2:83902376-83902395 Msa0431830:intron 25.0%
! AGATATTATATGAGAAGAAG+AGG + chr3_2:83902706-83902725 None:intergenic 25.0%
! CATTGTTTATTCTATGTTCA+AGG + chr3_2:83903035-83903054 None:intergenic 25.0%
! AGAATAAACAATGATTTCAG+GGG - chr3_2:83903042-83903061 Msa0431830:intron 25.0%
! TAACTGTTATGATTGAATGA+CGG + chr3_2:83903225-83903244 None:intergenic 25.0%
! AAACTACTTAATCATTGCAA+AGG - chr3_2:83903302-83903321 Msa0431830:intron 25.0%
!!! ATTTTAGTCCTTACATAACA+TGG - chr3_2:83903423-83903442 Msa0431830:intron 25.0%
!! TTTTAGTCCTTACATAACAT+GGG - chr3_2:83903424-83903443 Msa0431830:intron 25.0%
! AACCTAGAAAATATACTTCA+AGG - chr3_2:83903487-83903506 Msa0431830:intron 25.0%
!!! AGCAAAAAGACATTTTTTAC+TGG - chr3_2:83903529-83903548 Msa0431830:intron 25.0%
! TAATGCGTTTAAATATGCTT+TGG + chr3_2:83903561-83903580 None:intergenic 25.0%
!!! TAGTATCTCATTTTAATGAC+AGG - chr3_2:83903600-83903619 Msa0431830:intron 25.0%
!! TCATCTTATTCTTTAGAAGT+TGG + chr3_2:83903767-83903786 None:intergenic 25.0%
! CTAAAGAATAAGATGAATGT+CGG - chr3_2:83903771-83903790 Msa0431830:intron 25.0%
! AAAAATAAGATCAAAATGGC+TGG - chr3_2:83904103-83904122 Msa0431830:intron 25.0%
!! AAATGTGTTTGTGTTGATAT+AGG + chr3_2:83904618-83904637 None:intergenic 25.0%
! TATATCAACACAAACACATT+TGG - chr3_2:83904617-83904636 Msa0431830:intron 25.0%
! TTTGATTCAGTTTGACTAAA+TGG + chr3_2:83904829-83904848 None:intergenic 25.0%
! TGTTGTACAAATTACTAATC+AGG - chr3_2:83904891-83904910 Msa0431830:CDS 25.0%
TGAAATTCATGGTTACTTGT+TGG - chr3_2:83896531-83896550 Msa0431830:CDS 30.0%
!! TTGGTGTCTAGTTAATCTTT+TGG - chr3_2:83896550-83896569 Msa0431830:CDS 30.0%
! TGGTGTCTAGTTAATCTTTT+GGG - chr3_2:83896551-83896570 Msa0431830:CDS 30.0%
GAGTAATATTGTAGTGAAAG+TGG - chr3_2:83896601-83896620 Msa0431830:CDS 30.0%
GTAATTGATGTTAGCAGTAA+TGG - chr3_2:83896629-83896648 Msa0431830:CDS 30.0%
TACTATGTATAGTCTAGACA+TGG - chr3_2:83896831-83896850 Msa0431830:CDS 30.0%
! TTTTATAACTTTTCACGGGT+GGG + chr3_2:83897012-83897031 None:intergenic 30.0%
! TTTTTATAACTTTTCACGGG+TGG + chr3_2:83897013-83897032 None:intergenic 30.0%
!!! TGTTGGTTTTGAATTTGGAT+TGG + chr3_2:83897206-83897225 None:intergenic 30.0%
!!! GGTTTTGTTGGTTTTGAATT+TGG + chr3_2:83897211-83897230 None:intergenic 30.0%
CGAAACCAATAGAACAATAA+AGG - chr3_2:83897270-83897289 Msa0431830:intron 30.0%
GGAATCCTTTATTGTTCTAT+TGG + chr3_2:83897278-83897297 None:intergenic 30.0%
!! TGTTGTGACTTTTGATGATT+TGG + chr3_2:83897299-83897318 None:intergenic 30.0%
TGATAAAGTGTGAAATAGCA+TGG - chr3_2:83897607-83897626 Msa0431830:CDS 30.0%
ACAAAACGTTTCAGTTACAT+AGG - chr3_2:83897823-83897842 Msa0431830:intron 30.0%
GTTAAGTGCACATACATATA+TGG + chr3_2:83897962-83897981 None:intergenic 30.0%
! ATTTTCCTTAAATTAGACGG+GGG + chr3_2:83898411-83898430 None:intergenic 30.0%
TAAGGTAAATTTGCATGTAC+GGG - chr3_2:83898439-83898458 Msa0431830:CDS 30.0%
TCGAAGAGCTTAGAAATTTA+AGG - chr3_2:83898887-83898906 Msa0431830:CDS 30.0%
CATTGTAGATTTGAAGACTT+AGG + chr3_2:83899155-83899174 None:intergenic 30.0%
ATAATGTTGTAAAAGACGAC+GGG - chr3_2:83899268-83899287 Msa0431830:CDS 30.0%
!!! ATGGTTTTGGGTCATTATTT+TGG + chr3_2:83899417-83899436 None:intergenic 30.0%
! CATTGGATATAGATGGTTTT+GGG + chr3_2:83899429-83899448 None:intergenic 30.0%
! CATTGGATATAGATGGTTTT+GGG + chr3_2:83899429-83899448 None:intergenic 30.0%
AAAAAGATAGAGATGAGTAG+AGG - chr3_2:83899508-83899527 Msa0431830:CDS 30.0%
AAAAGATAGAGATGAGTAGA+GGG - chr3_2:83899509-83899528 Msa0431830:CDS 30.0%
! CATTCATCTCTCGATATTTT+AGG + chr3_2:83899560-83899579 None:intergenic 30.0%
CTAAAATATCGAGAGATGAA+TGG - chr3_2:83899558-83899577 Msa0431830:CDS 30.0%
TACATTTGCATAAACTTCAG+GGG + chr3_2:83899772-83899791 None:intergenic 30.0%
CTTACATTTGCATAAACTTC+AGG + chr3_2:83899774-83899793 None:intergenic 30.0%
TGCATAGTGAAAAAATAGAG+GGG + chr3_2:83899803-83899822 None:intergenic 30.0%
GTGCATAGTGAAAAAATAGA+GGG + chr3_2:83899804-83899823 None:intergenic 30.0%
TGTGCATAGTGAAAAAATAG+AGG + chr3_2:83899805-83899824 None:intergenic 30.0%
GTATAATGGCAGTCAATTAA+CGG + chr3_2:83899879-83899898 None:intergenic 30.0%
! AATGTAAAGAGGTATGATCT+TGG - chr3_2:83899907-83899926 Msa0431830:CDS 30.0%
!! TTAGTTTTCTAAGGAACCAA+CGG + chr3_2:83899979-83899998 None:intergenic 30.0%
!! ATTAATTTGCTTAACAGTGG+CGG - chr3_2:83900069-83900088 Msa0431830:CDS 30.0%
CATCAATTGCTAAATTGAGT+TGG + chr3_2:83900265-83900284 None:intergenic 30.0%
GATTTGAGAGGATTAAAGAT+TGG - chr3_2:83900321-83900340 Msa0431830:intron 30.0%
TCAATAAACACTCGAGAATA+TGG + chr3_2:83900391-83900410 None:intergenic 30.0%
!! GTTTATTGATTCACTTCCTT+TGG - chr3_2:83900402-83900421 Msa0431830:intron 30.0%
!! TAAACATGTTGTTCTGGAAA+TGG + chr3_2:83900454-83900473 None:intergenic 30.0%
AATGGTTAAACATGTTGTTC+TGG + chr3_2:83900460-83900479 None:intergenic 30.0%
GTTTAACCATTTCTCTCTAA+CGG - chr3_2:83900469-83900488 Msa0431830:intron 30.0%
!! GATTTTTCGAAAAATAGAGG+GGG - chr3_2:83900526-83900545 Msa0431830:intron 30.0%
GTTGTATTTACATTAACCTC+AGG - chr3_2:83900554-83900573 Msa0431830:intron 30.0%
TGTATTTACATTAACCTCAG+GGG - chr3_2:83900556-83900575 Msa0431830:intron 30.0%
AAGAAAGAAACAGAAAACCA+TGG - chr3_2:83900606-83900625 Msa0431830:intron 30.0%
ATACTAAATACACACGTCTT+TGG + chr3_2:83900699-83900718 None:intergenic 30.0%
CGTTCAATTCAATTAAATGG+CGG - chr3_2:83900783-83900802 Msa0431830:intron 30.0%
AAATTTGTGATGAACAGCTT+TGG - chr3_2:83901312-83901331 Msa0431830:intron 30.0%
TGTGATATTTGGAAGAAGTA+TGG + chr3_2:83901484-83901503 None:intergenic 30.0%
CTGAATCAGTTTGTGATATT+TGG + chr3_2:83901495-83901514 None:intergenic 30.0%
AGAGAAATTGCACTTAGATA+GGG + chr3_2:83901655-83901674 None:intergenic 30.0%
AAGAGAAATTGCACTTAGAT+AGG + chr3_2:83901656-83901675 None:intergenic 30.0%
! AAAAGTTTAGAGCCTAGAAT+TGG + chr3_2:83901763-83901782 None:intergenic 30.0%
!!! CATCCCTATTTTTTTTGCTA+AGG + chr3_2:83901788-83901807 None:intergenic 30.0%
GAATAAATTAGCCATACCAT+CGG + chr3_2:83901839-83901858 None:intergenic 30.0%
!! ATTCATTGAGTTTTGATGTG+AGG - chr3_2:83901860-83901879 Msa0431830:intron 30.0%
!! TTCATTGAGTTTTGATGTGA+GGG - chr3_2:83901861-83901880 Msa0431830:intron 30.0%
! TCATCTAGTTTCTTTGTTCT+AGG + chr3_2:83901925-83901944 None:intergenic 30.0%
AAATTTGTGTCAACAAGTGT+TGG + chr3_2:83901988-83902007 None:intergenic 30.0%
! ACTAGATTTAATGGTCTTAG+TGG - chr3_2:83902195-83902214 Msa0431830:intron 30.0%
! GATTTTGGACACCAAATAAA+GGG - chr3_2:83902301-83902320 Msa0431830:intron 30.0%
TGATATGTACTCTATTCCAA+AGG - chr3_2:83902416-83902435 Msa0431830:intron 30.0%
GATATGTACTCTATTCCAAA+GGG - chr3_2:83902417-83902436 Msa0431830:intron 30.0%
ATAGGAGTTCCAGTTAAAAA+TGG - chr3_2:83902474-83902493 Msa0431830:intron 30.0%
ATATAACAATCACTGCAAGT+AGG - chr3_2:83902839-83902858 Msa0431830:intron 30.0%
TTGTTTCAATGAAAGACAAC+AGG - chr3_2:83902914-83902933 Msa0431830:intron 30.0%
!! TGTTCATTGGATTTGTTGTT+TGG - chr3_2:83903007-83903026 Msa0431830:intron 30.0%
!! GTTCATTGGATTTGTTGTTT+GGG - chr3_2:83903008-83903027 Msa0431830:intron 30.0%
! TTTTAGTCCCATGTTATGTA+AGG + chr3_2:83903434-83903453 None:intergenic 30.0%
! GTCCTTGAAGTATATTTTCT+AGG + chr3_2:83903492-83903511 None:intergenic 30.0%
TACTTCAAGGACTAAACATA+AGG - chr3_2:83903500-83903519 Msa0431830:intron 30.0%
CGTTTAAATATGCTTTGGTT+TGG + chr3_2:83903556-83903575 None:intergenic 30.0%
!! CTCAAAGGTTCTTTTGTTTA+TGG - chr3_2:83903798-83903817 Msa0431830:intron 30.0%
!! TTATGGAATTTTGAAGGACT+TGG - chr3_2:83903815-83903834 Msa0431830:intron 30.0%
!! TATGGAATTTTGAAGGACTT+GGG - chr3_2:83903816-83903835 Msa0431830:intron 30.0%
! ATAAAAGGAAGTGTAAATGG+TGG - chr3_2:83903897-83903916 Msa0431830:intron 30.0%
!! CCAAGAAAGTGCTTAATATA+GGG + chr3_2:83903948-83903967 None:intergenic 30.0%
!! TCCAAGAAAGTGCTTAATAT+AGG + chr3_2:83903949-83903968 None:intergenic 30.0%
TAGTTGTTCAAAGTATGTCA+TGG - chr3_2:83903974-83903993 Msa0431830:intron 30.0%
! GTTGAACCAAGATTTAAAAC+TGG - chr3_2:83903996-83904015 Msa0431830:intron 30.0%
! AATTTGTAGGCTTTTCCAAA+AGG - chr3_2:83904373-83904392 Msa0431830:intron 30.0%
TGAAAACAATTGAGAATGCA+TGG - chr3_2:83904455-83904474 Msa0431830:intron 30.0%
ATTTCCTCAAATAACAGTCT+TGG - chr3_2:83904514-83904533 Msa0431830:intron 30.0%
AAAGATTACGAGTGCTAATA+GGG + chr3_2:83904584-83904603 None:intergenic 30.0%
! ATTGAAGTACTTGGACTATT+GGG + chr3_2:83904646-83904665 None:intergenic 30.0%
! TATTGAAGTACTTGGACTAT+TGG + chr3_2:83904647-83904666 None:intergenic 30.0%
ATAGTCCAAGTACTTCAATA+TGG - chr3_2:83904647-83904666 Msa0431830:CDS 30.0%
! TTTTAGTCCAAACACAGAAT+TGG - chr3_2:83904867-83904886 Msa0431830:CDS 30.0%
TACTTTCACAGTTATTCACA+GGG + chr3_2:83904924-83904943 None:intergenic 30.0%
TTACTTTCACAGTTATTCAC+AGG + chr3_2:83904925-83904944 None:intergenic 30.0%
! TGTCTAGTTAATCTTTTGGG+TGG - chr3_2:83896554-83896573 Msa0431830:CDS 35.0%
! TTAGCAGTAATGGAACTGTT+GGG - chr3_2:83896639-83896658 Msa0431830:CDS 35.0%
TAGAATCCAACTCATCGTAA+GGG - chr3_2:83896730-83896749 Msa0431830:CDS 35.0%
AGCCAGAGAGACAAAATAAA+GGG + chr3_2:83896812-83896831 None:intergenic 35.0%
TAGCCAGAGAGACAAAATAA+AGG + chr3_2:83896813-83896832 None:intergenic 35.0%
! TTTATAACTTTTCACGGGTG+GGG + chr3_2:83897011-83897030 None:intergenic 35.0%
! AGCCTATTTTCACATTTCAG+TGG - chr3_2:83897049-83897068 Msa0431830:intron 35.0%
TGCCACTGAAATGTGAAAAT+AGG + chr3_2:83897054-83897073 None:intergenic 35.0%
AAAGAACTAGATGTTACGAG+AGG + chr3_2:83897232-83897251 None:intergenic 35.0%
ATCATCTTCAAGAGTCAAGA+CGG - chr3_2:83897354-83897373 Msa0431830:intron 35.0%
ACCGAACTAACATCACTTAT+CGG - chr3_2:83897386-83897405 Msa0431830:intron 35.0%
AAACATGTCAACTAGCAACT+AGG + chr3_2:83897643-83897662 None:intergenic 35.0%
!! AAACGTTTTGTTCTGAATCC+AGG + chr3_2:83897814-83897833 None:intergenic 35.0%
! TTTCTCTTGCTCTCTTTTTC+AGG + chr3_2:83898286-83898305 None:intergenic 35.0%
ATATACCCCCGTCTAATTTA+AGG - chr3_2:83898403-83898422 Msa0431830:CDS 35.0%
TAAATTTGCATGTACGGGTA+CGG - chr3_2:83898444-83898463 Msa0431830:CDS 35.0%
TTACACACACAGAGCATATA+TGG + chr3_2:83898653-83898672 None:intergenic 35.0%
TGTTAATTTCGGCATGCATA+TGG - chr3_2:83898674-83898693 Msa0431830:intron 35.0%
AAACTGCAAATCCAGATTCA+AGG + chr3_2:83898724-83898743 None:intergenic 35.0%
!! TTAACTTGTTGCTGCGTTAA+AGG - chr3_2:83898776-83898795 Msa0431830:CDS 35.0%
TTCTATGTCGTTCTAGTGTT+TGG + chr3_2:83899242-83899261 None:intergenic 35.0%
! CCATTGGATATAGATGGTTT+TGG + chr3_2:83899430-83899449 None:intergenic 35.0%
CCAAAACCATCTATATCCAA+TGG - chr3_2:83899427-83899446 Msa0431830:CDS 35.0%
TCTCATCCATTGGATATAGA+TGG + chr3_2:83899436-83899455 None:intergenic 35.0%
! CCATTGGATATAGATGGTTT+TGG + chr3_2:83899430-83899449 None:intergenic 35.0%
CCAAAACCATCTATATCCAA+TGG - chr3_2:83899427-83899446 Msa0431830:CDS 35.0%
TCTCATCCATTGGATATAGA+TGG + chr3_2:83899436-83899455 None:intergenic 35.0%
GCATAGTGAAAAAATAGAGG+GGG + chr3_2:83899802-83899821 None:intergenic 35.0%
! AATTAACGGTGTTAGGCAAA+GGG + chr3_2:83899865-83899884 None:intergenic 35.0%
CTACCAATATCAGCTTAACA+TGG - chr3_2:83900168-83900187 Msa0431830:intron 35.0%
! AATTGATGTGAATGGTAGTG+TGG - chr3_2:83900277-83900296 Msa0431830:intron 35.0%
!! TTTCAGTTGGTTGATTTGAG+AGG - chr3_2:83900309-83900328 Msa0431830:intron 35.0%
!! AAAGATTGCTTTTGATGACC+TGG - chr3_2:83900363-83900382 Msa0431830:intron 35.0%
TTGGATTGTTCTAACGGTAA+GGG - chr3_2:83900495-83900514 Msa0431830:intron 35.0%
! AGTATTTACCTTACGGGTTA+CGG - chr3_2:83900714-83900733 Msa0431830:intron 35.0%
!! CAGTGTTGATGTATGTCATA+AGG - chr3_2:83901109-83901128 Msa0431830:intron 35.0%
!!! GGGACTCATTTTAAAACGAA+AGG + chr3_2:83901248-83901267 None:intergenic 35.0%
GTTGCTGAAAAGGTTACAAT+GGG + chr3_2:83901433-83901452 None:intergenic 35.0%
TGTTGCTGAAAAGGTTACAA+TGG + chr3_2:83901434-83901453 None:intergenic 35.0%
!!! GTAGACAATAGTTTTGGTGA+AGG - chr3_2:83901580-83901599 Msa0431830:intron 35.0%
GTAGGCATGTTGAAGAAAAT+TGG + chr3_2:83901623-83901642 None:intergenic 35.0%
TAGATAGGGAACTTGAATGT+AGG + chr3_2:83901641-83901660 None:intergenic 35.0%
! AAATACTCTAGTGGGTATAG+TGG + chr3_2:83901725-83901744 None:intergenic 35.0%
TGCACAACAAATACTCTAGT+GGG + chr3_2:83901733-83901752 None:intergenic 35.0%
AAAATAGGGATGATGAGTCA+AGG - chr3_2:83901796-83901815 Msa0431830:intron 35.0%
TATGTTTGGATAGTAACCGA+TGG - chr3_2:83901820-83901839 Msa0431830:intron 35.0%
! TTTTGATGTGAGGGAATCAA+TGG - chr3_2:83901870-83901889 Msa0431830:intron 35.0%
TGCTACAATTGCATTAGCAA+TGG - chr3_2:83902035-83902054 Msa0431830:intron 35.0%
GCTATTGAGAAAGTTGGAAT+TGG - chr3_2:83902057-83902076 Msa0431830:intron 35.0%
!! AGTGGTGATTTTGATGTTGT+TGG - chr3_2:83902213-83902232 Msa0431830:intron 35.0%
!! GTGATTTTGATGTTGTTGGT+GGG - chr3_2:83902217-83902236 Msa0431830:intron 35.0%
! GTGAAAAGAGAGTTGGATTT+TGG - chr3_2:83902286-83902305 Msa0431830:intron 35.0%
! GGATTTTGGACACCAAATAA+AGG - chr3_2:83902300-83902319 Msa0431830:intron 35.0%
TTTCGAGATAGCCCTTTATT+TGG + chr3_2:83902315-83902334 None:intergenic 35.0%
TAAAGGGCTATCTCGAAATT+TGG - chr3_2:83902317-83902336 Msa0431830:intron 35.0%
ATGATCTTGGGTCAATCATA+TGG - chr3_2:83902388-83902407 Msa0431830:intron 35.0%
GATGGGAAATTCCTACTATT+GGG - chr3_2:83902439-83902458 Msa0431830:intron 35.0%
CTCAATTTCTTCCCAATAGT+AGG + chr3_2:83902453-83902472 None:intergenic 35.0%
CTACTATTGGGAAGAAATTG+AGG - chr3_2:83902451-83902470 Msa0431830:intron 35.0%
ATTGGGAAGAAATTGAGGAT+AGG - chr3_2:83902456-83902475 Msa0431830:intron 35.0%
AAGTCATATGGTAAGGCATA+AGG + chr3_2:83902606-83902625 None:intergenic 35.0%
TCGAACAAAGTCATATGGTA+AGG + chr3_2:83902613-83902632 None:intergenic 35.0%
GCAAATCGAACAAAGTCATA+TGG + chr3_2:83902618-83902637 None:intergenic 35.0%
GGATTGACAGAAATTTGATG+CGG - chr3_2:83902807-83902826 Msa0431830:intron 35.0%
ACAACAGGAAGAAAAATGCA+TGG - chr3_2:83902929-83902948 Msa0431830:intron 35.0%
CAACAGGAAGAAAAATGCAT+GGG - chr3_2:83902930-83902949 Msa0431830:intron 35.0%
GCATGTTCATTTGTGTTCAT+TGG - chr3_2:83902994-83903013 Msa0431830:intron 35.0%
! ATGGTTTTCCTTCTCAACTA+TGG - chr3_2:83903095-83903114 Msa0431830:intron 35.0%
CGAATGTTCTACATACTACA+TGG - chr3_2:83903455-83903474 Msa0431830:intron 35.0%
AGAGAAAGTAGTGAGTAACT+TGG - chr3_2:83903623-83903642 Msa0431830:intron 35.0%
AAGATTTGTGGTGGTTGTAT+GGG - chr3_2:83903647-83903666 Msa0431830:intron 35.0%
TCTTGACAGTTGAACAACTA+AGG - chr3_2:83903721-83903740 Msa0431830:intron 35.0%
CCCTATATTAAGCACTTTCT+TGG - chr3_2:83903945-83903964 Msa0431830:intron 35.0%
! GAACCAAGATTTAAAACTGG+TGG - chr3_2:83903999-83904018 Msa0431830:intron 35.0%
!!! AAGCCACCAGTTTTAAATCT+TGG + chr3_2:83904005-83904024 None:intergenic 35.0%
! AGATTTAAAACTGGTGGCTT+TGG - chr3_2:83904005-83904024 Msa0431830:intron 35.0%
CTTGTGTGTGATGAATTTGT+AGG - chr3_2:83904360-83904379 Msa0431830:intron 35.0%
GCAATCCTAAATGTAACTCA+AGG - chr3_2:83904424-83904443 Msa0431830:intron 35.0%
TGTCTCCTTGAGTTACATTT+AGG + chr3_2:83904432-83904451 None:intergenic 35.0%
! AAGTCCAAGACTGTTATTTG+AGG + chr3_2:83904521-83904540 None:intergenic 35.0%
! TCTTGGACTTGAAAGCTTTT+GGG - chr3_2:83904531-83904550 Msa0431830:intron 35.0%
CAAAGATTACGAGTGCTAAT+AGG + chr3_2:83904585-83904604 None:intergenic 35.0%
AGTCCTCATCATGATGATTT+AGG - chr3_2:83904763-83904782 Msa0431830:CDS 35.0%
! TCAGTTTGACTAAATGGACT+AGG + chr3_2:83904823-83904842 None:intergenic 35.0%
TGGACTAAAATCGTCATTCA+AGG + chr3_2:83904857-83904876 None:intergenic 35.0%
ACAACATCCAATTCTGTGTT+TGG + chr3_2:83904877-83904896 None:intergenic 35.0%
ACTTTCACAGTTATTCACAG+GGG + chr3_2:83904923-83904942 None:intergenic 35.0%
! GTTAGCAGTAATGGAACTGT+TGG - chr3_2:83896638-83896657 Msa0431830:CDS 40.0%
AATGGAACTGTTGGGAAGAT+AGG - chr3_2:83896647-83896666 Msa0431830:CDS 40.0%
! CGATGAGTTGGATTCTAGTT+TGG + chr3_2:83896727-83896746 None:intergenic 40.0%
CTAGAATCCAACTCATCGTA+AGG - chr3_2:83896729-83896748 Msa0431830:CDS 40.0%
TCATCGTAAGGGATTCTCAT+AGG - chr3_2:83896741-83896760 Msa0431830:CDS 40.0%
CATCGTAAGGGATTCTCATA+GGG - chr3_2:83896742-83896761 Msa0431830:CDS 40.0%
!!! ACCCCTTTATTTTGTCTCTC+TGG - chr3_2:83896807-83896826 Msa0431830:CDS 40.0%
GCCAGAGAGACAAAATAAAG+GGG + chr3_2:83896811-83896830 None:intergenic 40.0%
GTATAGTCTAGACATGGCAA+CGG - chr3_2:83896837-83896856 Msa0431830:CDS 40.0%
TATAGTCTAGACATGGCAAC+GGG - chr3_2:83896838-83896857 Msa0431830:CDS 40.0%
! TTATAACTTTTCACGGGTGG+GGG + chr3_2:83897010-83897029 None:intergenic 40.0%
! TTTTGCCACTGAAACAGGTT+TGG + chr3_2:83897079-83897098 None:intergenic 40.0%
!! GATGTTACGAGAGGTTTTGT+TGG + chr3_2:83897223-83897242 None:intergenic 40.0%
GCCGATAAGTGATGTTAGTT+CGG + chr3_2:83897390-83897409 None:intergenic 40.0%
GAACTAACATCACTTATCGG+CGG - chr3_2:83897389-83897408 Msa0431830:intron 40.0%
ATGTCAACTAGCAACTAGGT+TGG + chr3_2:83897639-83897658 None:intergenic 40.0%
AGGAAATAGCATGGATCTTC+AGG - chr3_2:83897933-83897952 Msa0431830:intron 40.0%
CAGAAACAGTTCAGATCTGA+AGG - chr3_2:83898157-83898176 Msa0431830:intron 40.0%
AGATCTGAAGGAAATCGAAG+TGG - chr3_2:83898169-83898188 Msa0431830:intron 40.0%
! AAGTGAAGAGTACAGTACAG+CGG - chr3_2:83898320-83898339 Msa0431830:CDS 40.0%
GGAGGAGGAAAAGGAAAATA+AGG - chr3_2:83898350-83898369 Msa0431830:CDS 40.0%
AAATTTGCATGTACGGGTAC+GGG - chr3_2:83898445-83898464 Msa0431830:CDS 40.0%
AAAACCCGTAGACTAAATGC+GGG + chr3_2:83898522-83898541 None:intergenic 40.0%
GAAAACCCGTAGACTAAATG+CGG + chr3_2:83898523-83898542 None:intergenic 40.0%
! GGCTTTTCCCCGTTAAAAAT+CGG - chr3_2:83898573-83898592 Msa0431830:CDS 40.0%
! GCTTTTCCCCGTTAAAAATC+GGG - chr3_2:83898574-83898593 Msa0431830:CDS 40.0%
ACAATGTCAATGGGTGATTG+TGG - chr3_2:83899389-83899408 Msa0431830:CDS 40.0%
AGTAGAGGGAATATTGAGAG+AGG - chr3_2:83899523-83899542 Msa0431830:CDS 40.0%
GTAGAGGGAATATTGAGAGA+GGG - chr3_2:83899524-83899543 Msa0431830:CDS 40.0%
TAGAGGGAATATTGAGAGAG+GGG - chr3_2:83899525-83899544 Msa0431830:CDS 40.0%
ATTTGCATAAACTTCAGGGG+AGG + chr3_2:83899769-83899788 None:intergenic 40.0%
! ATTAACGGTGTTAGGCAAAG+GGG + chr3_2:83899864-83899883 None:intergenic 40.0%
! CAATTAACGGTGTTAGGCAA+AGG + chr3_2:83899866-83899885 None:intergenic 40.0%
ATGATCTTGGCTCCTAAGAA+CGG - chr3_2:83899920-83899939 Msa0431830:CDS 40.0%
ACAACAACACAACCGTTCTT+AGG + chr3_2:83899935-83899954 None:intergenic 40.0%
CGGAAATAGGAATGCAGAAA+AGG + chr3_2:83899959-83899978 None:intergenic 40.0%
TTCTGCATTCCTATTTCCGT+TGG - chr3_2:83899960-83899979 Msa0431830:CDS 40.0%
TCTAAGGAACCAACGGAAAT+AGG + chr3_2:83899972-83899991 None:intergenic 40.0%
CAGCCATGTTAAGCTGATAT+TGG + chr3_2:83900174-83900193 None:intergenic 40.0%
GCGAATCTTGCAAGAATTAC+TGG - chr3_2:83900193-83900212 Msa0431830:intron 40.0%
GAGTTGGAGCATAACATATC+AGG + chr3_2:83900249-83900268 None:intergenic 40.0%
! TGTGAATGGTAGTGTGGATT+CGG - chr3_2:83900283-83900302 Msa0431830:intron 40.0%
TCTTCGAATGGAAAACCCAA+AGG + chr3_2:83900421-83900440 None:intergenic 40.0%
CAACTTCCGTTAGAGAGAAA+TGG + chr3_2:83900478-83900497 None:intergenic 40.0%
CATTTCTCTCTAACGGAAGT+TGG - chr3_2:83900476-83900495 Msa0431830:intron 40.0%
CGGAAGTTGGATTGTTCTAA+CGG - chr3_2:83900489-83900508 Msa0431830:intron 40.0%
GTTGGATTGTTCTAACGGTA+AGG - chr3_2:83900494-83900513 Msa0431830:intron 40.0%
ATTTACATTAACCTCAGGGG+AGG - chr3_2:83900559-83900578 Msa0431830:intron 40.0%
AATTATATTGACCTCCCCTG+AGG + chr3_2:83900573-83900592 None:intergenic 40.0%
TTGTCGTCTACTAGCTACTA+AGG - chr3_2:83900743-83900762 Msa0431830:intron 40.0%
TGGAACTCGTCAACAACATA+AGG + chr3_2:83901065-83901084 None:intergenic 40.0%
!! ACCTCAACTATCCTAGCTTT+TGG - chr3_2:83901532-83901551 Msa0431830:intron 40.0%
TCCAAAAGCTAGGATAGTTG+AGG + chr3_2:83901536-83901555 None:intergenic 40.0%
!! CAACTATCCTAGCTTTTGGA+TGG - chr3_2:83901536-83901555 Msa0431830:intron 40.0%
CTTGTTTCCATCCAAAAGCT+AGG + chr3_2:83901546-83901565 None:intergenic 40.0%
! AGCTTTTGGATGGAAACAAG+TGG - chr3_2:83901546-83901565 Msa0431830:intron 40.0%
TTGAGTGATAGCATCATCTG+TGG + chr3_2:83901683-83901702 None:intergenic 40.0%
GTGCACAACAAATACTCTAG+TGG + chr3_2:83901734-83901753 None:intergenic 40.0%
TGATGAGTCAAGGCTATGTT+TGG - chr3_2:83901806-83901825 Msa0431830:intron 40.0%
TTGGATAGTAACCGATGGTA+TGG - chr3_2:83901825-83901844 Msa0431830:intron 40.0%
!! GAATCAATGGAAGGAGTGTT+GGG - chr3_2:83901883-83901902 Msa0431830:intron 40.0%
GCAATGGCTATTGAGAAAGT+TGG - chr3_2:83902051-83902070 Msa0431830:intron 40.0%
!! GGTGATTTTGATGTTGTTGG+TGG - chr3_2:83902216-83902235 Msa0431830:intron 40.0%
TCTCGAAATTTGGACACAGA+AGG - chr3_2:83902327-83902346 Msa0431830:intron 40.0%
GGAATAGAGTACATATCACC+TGG + chr3_2:83902414-83902433 None:intergenic 40.0%
TGTACTCTATTCCAAAGGGA+TGG - chr3_2:83902421-83902440 Msa0431830:intron 40.0%
GTACTCTATTCCAAAGGGAT+GGG - chr3_2:83902422-83902441 Msa0431830:intron 40.0%
GGATGGGAAATTCCTACTAT+TGG - chr3_2:83902438-83902457 Msa0431830:intron 40.0%
GCTTGTGTTGAATTGGTACT+AGG + chr3_2:83902537-83902556 None:intergenic 40.0%
TTGAGCGATCAACTCATTGT+AGG + chr3_2:83902667-83902686 None:intergenic 40.0%
TTGATCGCTCAACTTTACGA+CGG - chr3_2:83902675-83902694 Msa0431830:intron 40.0%
ACAGAAATTTGATGCGGTAG+TGG - chr3_2:83902813-83902832 Msa0431830:intron 40.0%
CAGAAATTTGATGCGGTAGT+GGG - chr3_2:83902814-83902833 Msa0431830:intron 40.0%
AGAAATTTGATGCGGTAGTG+GGG - chr3_2:83902815-83902834 Msa0431830:intron 40.0%
ACAATGCCATACACAGAATC+TGG - chr3_2:83902880-83902899 Msa0431830:intron 40.0%
!!! CTTTTTGAAGCCACTCACAT+GGG - chr3_2:83902954-83902973 Msa0431830:intron 40.0%
ATCAGATTGGCACAAGCTTA+TGG - chr3_2:83903076-83903095 Msa0431830:intron 40.0%
AGCATAGACCATAGTTGAGA+AGG + chr3_2:83903106-83903125 None:intergenic 40.0%
GAGTAACTTGGCAAGATTTG+TGG - chr3_2:83903635-83903654 Msa0431830:intron 40.0%
TAACTTGGCAAGATTTGTGG+TGG - chr3_2:83903638-83903657 Msa0431830:intron 40.0%
CAAGATTTGTGGTGGTTGTA+TGG - chr3_2:83903646-83903665 Msa0431830:intron 40.0%
! ATGAATGTCGGCTATCTCAA+AGG - chr3_2:83903783-83903802 Msa0431830:intron 40.0%
CAACCAGTTGAACCAGAAAT+CGG - chr3_2:83904128-83904147 Msa0431830:intron 40.0%
ATTGAAACAACCAGACTGCT+AGG + chr3_2:83904184-83904203 None:intergenic 40.0%
!! CTCTAGGGTTATGGTTCAAT+TGG + chr3_2:83904280-83904299 None:intergenic 40.0%
CAATTGAACCATAACCCTAG+AGG - chr3_2:83904278-83904297 Msa0431830:intron 40.0%
ATTGAACGATGAGACCTCTA+GGG + chr3_2:83904295-83904314 None:intergenic 40.0%
TCTTGTGGCTGACATTTCAA+GGG - chr3_2:83904402-83904421 Msa0431830:intron 40.0%
! GTCTTGGACTTGAAAGCTTT+TGG - chr3_2:83904530-83904549 Msa0431830:intron 40.0%
! CTTGGACTTGAAAGCTTTTG+GGG - chr3_2:83904532-83904551 Msa0431830:intron 40.0%
! CGTCTCCATATTGAAGTACT+TGG + chr3_2:83904655-83904674 None:intergenic 40.0%
TCTCACACATTCAAGAAGAG+TGG - chr3_2:83904718-83904737 Msa0431830:CDS 40.0%
GCACCTAAATCATCATGATG+AGG + chr3_2:83904769-83904788 None:intergenic 40.0%
TGATGATTTAGGTGCAGTTG+AGG - chr3_2:83904774-83904793 Msa0431830:CDS 40.0%
!! GTTTGACTAAATGGACTAGG+TGG + chr3_2:83904820-83904839 None:intergenic 40.0%
GAGAATCCCTTACGATGAGT+TGG + chr3_2:83896739-83896758 None:intergenic 45.0%
ATAGTCTAGACATGGCAACG+GGG - chr3_2:83896839-83896858 Msa0431830:CDS 45.0%
GCAAACCAAACCTGTTTCAG+TGG - chr3_2:83897071-83897090 Msa0431830:intron 45.0%
!!! GGCTTTTTTGCCACTGAAAC+AGG + chr3_2:83897084-83897103 None:intergenic 45.0%
AGAGCAAGAGAAAGAGAGAG+AGG - chr3_2:83898293-83898312 Msa0431830:intron 45.0%
AATTTGCATGTACGGGTACG+GGG - chr3_2:83898446-83898465 Msa0431830:CDS 45.0%
AAACCCGTAGACTAAATGCG+GGG + chr3_2:83898521-83898540 None:intergenic 45.0%
! TTTAGTCTACGGGTTTTCCC+CGG - chr3_2:83898525-83898544 Msa0431830:CDS 45.0%
AAAGCCGAATTAACTGGGTC+CGG + chr3_2:83898559-83898578 None:intergenic 45.0%
GGGGAAAAGCCGAATTAACT+GGG + chr3_2:83898564-83898583 None:intergenic 45.0%
AGAGGGAATATTGAGAGAGG+GGG - chr3_2:83899526-83899545 Msa0431830:CDS 45.0%
AATATTGAGAGAGGGGGCTA+GGG - chr3_2:83899532-83899551 Msa0431830:CDS 45.0%
! TTAACGGTGTTAGGCAAAGG+GGG + chr3_2:83899863-83899882 None:intergenic 45.0%
GGCAGTCAATTAACGGTGTT+AGG + chr3_2:83899872-83899891 None:intergenic 45.0%
! GTGGATTCGGTTGTTTCAGT+TGG - chr3_2:83900296-83900315 Msa0431830:intron 45.0%
ACACTCGAGAATATGGAACC+AGG + chr3_2:83900384-83900403 None:intergenic 45.0%
! GGTTTTCCATTCGAAGAGTG+AGG - chr3_2:83900424-83900443 Msa0431830:intron 45.0%
GGTATTCCTCACTCTTCGAA+TGG + chr3_2:83900433-83900452 None:intergenic 45.0%
GATTGTTCTAACGGTAAGGG+AGG - chr3_2:83900498-83900517 Msa0431830:intron 45.0%
TCGACACATCTCGTTCAACT+GGG + chr3_2:83900634-83900653 None:intergenic 45.0%
! TGAAGAAGTGCAAGCCATCA+TGG - chr3_2:83901348-83901367 Msa0431830:intron 45.0%
! GAAGAAGTGCAAGCCATCAT+GGG - chr3_2:83901349-83901368 Msa0431830:intron 45.0%
! AAGAAGTGCAAGCCATCATG+GGG - chr3_2:83901350-83901369 Msa0431830:intron 45.0%
! TGTTGTTATTGGCCCCATGA+TGG + chr3_2:83901365-83901384 None:intergenic 45.0%
!! TGAAGGGCTTGTTGCTGAAA+AGG + chr3_2:83901443-83901462 None:intergenic 45.0%
AGCTAGGATAGTTGAGGTGA+TGG + chr3_2:83901530-83901549 None:intergenic 45.0%
GTGCACATGTCACCAATTCT+AGG - chr3_2:83901748-83901767 Msa0431830:intron 45.0%
GATGTGAGGGAATCAATGGA+AGG - chr3_2:83901874-83901893 Msa0431830:intron 45.0%
! GGAATCAATGGAAGGAGTGT+TGG - chr3_2:83901882-83901901 Msa0431830:intron 45.0%
! GGTGATGGTGAAAAGAGAGT+TGG - chr3_2:83902279-83902298 Msa0431830:intron 45.0%
TTGGACACAGAAGGCCTAAT+AGG - chr3_2:83902336-83902355 Msa0431830:intron 45.0%
GTAGGAATTTCCCATCCCTT+TGG + chr3_2:83902435-83902454 None:intergenic 45.0%
ACCAATTCAACACAAGCCAC+TGG - chr3_2:83902540-83902559 Msa0431830:intron 45.0%
GATATCAATGCAGAAGCCAG+TGG + chr3_2:83902559-83902578 None:intergenic 45.0%
! GTTCGATTTGCAAAGCCTGA+TGG - chr3_2:83902627-83902646 Msa0431830:intron 45.0%
TGATCGCTCAACTTTACGAC+GGG - chr3_2:83902676-83902695 Msa0431830:intron 45.0%
! GAAATTTGATGCGGTAGTGG+GGG - chr3_2:83902816-83902835 Msa0431830:intron 45.0%
GTCACACCAGATTCTGTGTA+TGG + chr3_2:83902889-83902908 None:intergenic 45.0%
CACAGAATCTGGTGTGACAA+TGG - chr3_2:83902891-83902910 Msa0431830:intron 45.0%
CCATGTGAGTGGCTTCAAAA+AGG + chr3_2:83902956-83902975 None:intergenic 45.0%
!!! CCTTTTTGAAGCCACTCACA+TGG - chr3_2:83902953-83902972 Msa0431830:intron 45.0%
! GGTGGTTGTATGGGTTTTTG+TGG - chr3_2:83903656-83903675 Msa0431830:intron 45.0%
TGGTGTACGTCTGTAATAGC+TGG + chr3_2:83903747-83903766 None:intergenic 45.0%
!! TAGCCGATTTCTGGTTCAAC+TGG + chr3_2:83904134-83904153 None:intergenic 45.0%
! TCGAAGAACTAGCCGATTTC+TGG + chr3_2:83904143-83904162 None:intergenic 45.0%
ATCTCAGTTACCTAGCAGTC+TGG - chr3_2:83904171-83904190 Msa0431830:intron 45.0%
GATTGAACGATGAGACCTCT+AGG + chr3_2:83904296-83904315 None:intergenic 45.0%
CTTGAAATGTCAGCCACAAG+AGG + chr3_2:83904403-83904422 None:intergenic 45.0%
CTCTTGTGGCTGACATTTCA+AGG - chr3_2:83904401-83904420 Msa0431830:intron 45.0%
GTAAAGATTCTATCCCCGCC+GGG + chr3_2:83896940-83896959 None:intergenic 50.0%
GGTAAAGATTCTATCCCCGC+CGG + chr3_2:83896941-83896960 None:intergenic 50.0%
TACAAGACGACACTGTTGCC+TGG - chr3_2:83897793-83897812 Msa0431830:intron 50.0%
GCAAGAGAAAGAGAGAGAGG+CGG - chr3_2:83898296-83898315 Msa0431830:intron 50.0%
! TGAAGAGTACAGTACAGCGG+CGG - chr3_2:83898323-83898342 Msa0431830:CDS 50.0%
AACCCGTAGACTAAATGCGG+GGG + chr3_2:83898520-83898539 None:intergenic 50.0%
AAGCCGAATTAACTGGGTCC+GGG + chr3_2:83898558-83898577 None:intergenic 50.0%
CGGGGAAAAGCCGAATTAAC+TGG + chr3_2:83898565-83898584 None:intergenic 50.0%
TCCCCGTTAAAAATCGGGTG+CGG - chr3_2:83898579-83898598 Msa0431830:CDS 50.0%
GAATATTGAGAGAGGGGGCT+AGG - chr3_2:83899531-83899550 Msa0431830:CDS 50.0%
CGACACATCTCGTTCAACTG+GGG + chr3_2:83900633-83900652 None:intergenic 50.0%
CTCGACACATCTCGTTCAAC+TGG + chr3_2:83900635-83900654 None:intergenic 50.0%
CATGCAGGTTACTCGTATGG+CGG + chr3_2:83900673-83900692 None:intergenic 50.0%
CTGCATGCAGGTTACTCGTA+TGG + chr3_2:83900676-83900695 None:intergenic 50.0%
!! AAGAAGTGCCGTAACCCGTA+AGG + chr3_2:83900725-83900744 None:intergenic 50.0%
!! TGGAAGGAGTGTTGGGTGTT+AGG - chr3_2:83901890-83901909 Msa0431830:intron 50.0%
CTTGGGTCAATCATATGGCC+AGG - chr3_2:83902393-83902412 Msa0431830:intron 50.0%
! GCCAGTGGCTTGTGTTGAAT+TGG + chr3_2:83902544-83902563 None:intergenic 50.0%
! TGCAAAGCCTGATGGTGAGA+TGG - chr3_2:83902635-83902654 Msa0431830:intron 50.0%
GATCGCTCAACTTTACGACG+GGG - chr3_2:83902677-83902696 Msa0431830:intron 50.0%
AGCCACTCACATGGGATCTT+TGG - chr3_2:83902962-83902981 Msa0431830:intron 50.0%
GCCACTCACATGGGATCTTT+GGG - chr3_2:83902963-83902982 Msa0431830:intron 50.0%
ACCCAAAGATCCCATGTGAG+TGG + chr3_2:83902967-83902986 None:intergenic 50.0%
GGACCACTCTCTCATCAGAT+TGG - chr3_2:83903063-83903082 Msa0431830:intron 50.0%
GTGCCAATCTGATGAGAGAG+TGG + chr3_2:83903069-83903088 None:intergenic 50.0%
!! CGATGAGACCTCTAGGGTTA+TGG + chr3_2:83904289-83904308 None:intergenic 50.0%
TCCAAAAGGCTCACCTCTTG+TGG - chr3_2:83904387-83904406 Msa0431830:intron 50.0%
! TGGGGTCTGTTTCTCATTGC+AGG - chr3_2:83904550-83904569 Msa0431830:intron 50.0%
! GGGGTCTGTTTCTCATTGCA+GGG - chr3_2:83904551-83904570 Msa0431830:intron 50.0%
ATGGAGACGAATTCGCGTCT+TGG - chr3_2:83904666-83904685 Msa0431830:CDS 50.0%
TGGACAATGTGTACCTGGAG+AGG + chr3_2:83904800-83904819 None:intergenic 50.0%
CTAGGTGGACAATGTGTACC+TGG + chr3_2:83904805-83904824 None:intergenic 50.0%
! AACTTTTCACGGGTGGGGGT+GGG + chr3_2:83897006-83897025 None:intergenic 55.0%
! TAACTTTTCACGGGTGGGGG+TGG + chr3_2:83897007-83897026 None:intergenic 55.0%
GTACAGTACAGCGGCGGAAA+TGG - chr3_2:83898329-83898348 Msa0431830:CDS 55.0%
GGCGGAAATGGAGGAGGAAA+AGG - chr3_2:83898341-83898360 Msa0431830:CDS 55.0%
AATTAACTGGGTCCGGGTCC+GGG + chr3_2:83898552-83898571 None:intergenic 55.0%
GAATTAACTGGGTCCGGGTC+CGG + chr3_2:83898553-83898572 None:intergenic 55.0%
GGACCCGGACCCAGTTAATT+CGG - chr3_2:83898552-83898571 Msa0431830:CDS 55.0%
! CCCGCACCCGATTTTTAACG+GGG + chr3_2:83898583-83898602 None:intergenic 55.0%
CCCCGTTAAAAATCGGGTGC+GGG - chr3_2:83898580-83898599 Msa0431830:CDS 55.0%
! CCCCGCACCCGATTTTTAAC+GGG + chr3_2:83898584-83898603 None:intergenic 55.0%
CCCGTTAAAAATCGGGTGCG+GGG - chr3_2:83898581-83898600 Msa0431830:CDS 55.0%
! CCCCCGCACCCGATTTTTAA+CGG + chr3_2:83898585-83898604 None:intergenic 55.0%
CCGTTAAAAATCGGGTGCGG+GGG - chr3_2:83898582-83898601 Msa0431830:CDS 55.0%
TTAAAAATCGGGTGCGGGGG+CGG - chr3_2:83898585-83898604 Msa0431830:CDS 55.0%
TCTCGTTCAACTGGGGTCCA+TGG + chr3_2:83900626-83900645 None:intergenic 55.0%
ACACGTCTTTGGCTGCATGC+AGG + chr3_2:83900688-83900707 None:intergenic 55.0%
! AAGCCTGATGGTGAGATGGC+AGG - chr3_2:83902639-83902658 Msa0431830:intron 55.0%
GTTCCTGCCATCTCACCATC+AGG + chr3_2:83902645-83902664 None:intergenic 55.0%
! GCCACAAGAGGTGAGCCTTT+TGG + chr3_2:83904391-83904410 None:intergenic 55.0%
GTCGTCACTGCAGCTGCACA+CGG - chr3_2:83896767-83896786 Msa0431830:CDS 60.0%
GTCTAGACATGGCAACGGGG+CGG - chr3_2:83896842-83896861 Msa0431830:CDS 60.0%
TCTAGACATGGCAACGGGGC+GGG - chr3_2:83896843-83896862 Msa0431830:CDS 60.0%
!! GGTTTTGACACACCCGTCCC+CGG - chr3_2:83896875-83896894 Msa0431830:CDS 60.0%
TGGGTAGTGTGAAACGGGGC+CGG + chr3_2:83896897-83896916 None:intergenic 60.0%
GGGCTGGGTAGTGTGAAACG+GGG + chr3_2:83896901-83896920 None:intergenic 60.0%
GGGGCTGGGTAGTGTGAAAC+GGG + chr3_2:83896902-83896921 None:intergenic 60.0%
CGGGGCTGGGTAGTGTGAAA+CGG + chr3_2:83896903-83896922 None:intergenic 60.0%
ATTCTATCCCCGCCGGGTCT+GGG + chr3_2:83896934-83896953 None:intergenic 60.0%
! ACTTTTCACGGGTGGGGGTG+GGG + chr3_2:83897005-83897024 None:intergenic 60.0%
CAGTACAGCGGCGGAAATGG+AGG - chr3_2:83898332-83898351 Msa0431830:CDS 60.0%
TACAGCGGCGGAAATGGAGG+AGG - chr3_2:83898335-83898354 Msa0431830:CDS 60.0%
TTGCATGTACGGGTACGGGG+CGG - chr3_2:83898449-83898468 Msa0431830:CDS 60.0%
TAGACTAAATGCGGGGGCGG+GGG + chr3_2:83898514-83898533 None:intergenic 60.0%
GTAGACTAAATGCGGGGGCG+GGG + chr3_2:83898515-83898534 None:intergenic 60.0%
CGTAGACTAAATGCGGGGGC+GGG + chr3_2:83898516-83898535 None:intergenic 60.0%
CCGTAGACTAAATGCGGGGG+CGG + chr3_2:83898517-83898536 None:intergenic 60.0%
CCGCCCCCGCATTTAGTCTA+CGG - chr3_2:83898514-83898533 Msa0431830:CDS 60.0%
CGCCCCCGCATTTAGTCTAC+GGG - chr3_2:83898515-83898534 Msa0431830:CDS 60.0%
TAAAAATCGGGTGCGGGGGC+GGG - chr3_2:83898586-83898605 Msa0431830:CDS 60.0%
GCTTAACAGTGGCGGCCCTT+AGG - chr3_2:83900077-83900096 Msa0431830:CDS 60.0%
CTAGACATGGCAACGGGGCG+GGG - chr3_2:83896844-83896863 Msa0431830:CDS 65.0%
GGTAGTGTGAAACGGGGCCG+GGG + chr3_2:83896895-83896914 None:intergenic 65.0%
GGGTAGTGTGAAACGGGGCC+GGG + chr3_2:83896896-83896915 None:intergenic 65.0%
TTCTATCCCCGCCGGGTCTG+GGG + chr3_2:83896933-83896952 None:intergenic 65.0%
GATTCTATCCCCGCCGGGTC+TGG + chr3_2:83896935-83896954 None:intergenic 65.0%
TGGGAAACCCGTCCCCGTTG+GGG + chr3_2:83896975-83896994 None:intergenic 65.0%
CTGGGAAACCCGTCCCCGTT+GGG + chr3_2:83896976-83896995 None:intergenic 65.0%
TCTGGGAAACCCGTCCCCGT+TGG + chr3_2:83896977-83896996 None:intergenic 65.0%
! CTTTTCACGGGTGGGGGTGG+GGG + chr3_2:83897004-83897023 None:intergenic 65.0%
TGCATGTACGGGTACGGGGC+GGG - chr3_2:83898450-83898469 Msa0431830:CDS 65.0%
! CTACGGGTTTTCCCCGGACC+CGG - chr3_2:83898531-83898550 Msa0431830:CDS 65.0%
GGTGCAGTTGAGGCCTCTCC+AGG - chr3_2:83904784-83904803 Msa0431830:CDS 65.0%
TGTGAAACGGGGCCGGGGAC+GGG + chr3_2:83896890-83896909 None:intergenic 70.0%
GTGTGAAACGGGGCCGGGGA+CGG + chr3_2:83896891-83896910 None:intergenic 70.0%
TCTATCCCCGCCGGGTCTGG+GGG + chr3_2:83896932-83896951 None:intergenic 70.0%
ACCCCCAGACCTGCCCCCAA+CGG - chr3_2:83896958-83896977 Msa0431830:CDS 70.0%
TCCCCGTTGGGGGCAGGTCT+GGG + chr3_2:83896964-83896983 None:intergenic 70.0%
AGACCTGCCCCCAACGGGGA+CGG - chr3_2:83896964-83896983 Msa0431830:CDS 70.0%
GGGAAACCCGTCCCCGTTGG+GGG + chr3_2:83896974-83896993 None:intergenic 70.0%
GCATGTACGGGTACGGGGCG+GGG - chr3_2:83898451-83898470 Msa0431830:CDS 70.0%
CATGTACGGGTACGGGGCGG+GGG - chr3_2:83898452-83898471 Msa0431830:CDS 70.0%
TAAATGCGGGGGCGGGGGTG+GGG + chr3_2:83898509-83898528 None:intergenic 70.0%
CTAAATGCGGGGGCGGGGGT+GGG + chr3_2:83898510-83898529 None:intergenic 70.0%
ACTAAATGCGGGGGCGGGGG+TGG + chr3_2:83898511-83898530 None:intergenic 70.0%
! GTTTTCCCCGGACCCGGACC+CGG - chr3_2:83898537-83898556 Msa0431830:CDS 70.0%
CAAACCAACCCGCACCCGCC+GGG + chr3_2:83898615-83898634 None:intergenic 70.0%
GCAAACCAACCCGCACCCGC+CGG + chr3_2:83898616-83898635 None:intergenic 70.0%
GACATGGCAACGGGGCGGGG+CGG - chr3_2:83896847-83896866 Msa0431830:CDS 75.0%
ACATGGCAACGGGGCGGGGC+GGG - chr3_2:83896848-83896867 Msa0431830:CDS 75.0%
CCCGTTGGGGGCAGGTCTGG+GGG + chr3_2:83896962-83896981 None:intergenic 75.0%
CCCCCAGACCTGCCCCCAAC+GGG - chr3_2:83896959-83896978 Msa0431830:CDS 75.0%
CCCCGTTGGGGGCAGGTCTG+GGG + chr3_2:83896963-83896982 None:intergenic 75.0%
CCCCAGACCTGCCCCCAACG+GGG - chr3_2:83896960-83896979 Msa0431830:CDS 75.0%
GTCCCCGTTGGGGGCAGGTC+TGG + chr3_2:83896965-83896984 None:intergenic 75.0%
GACCTGCCCCCAACGGGGAC+GGG - chr3_2:83896965-83896984 Msa0431830:CDS 75.0%
AACCCGTCCCCGTTGGGGGC+AGG + chr3_2:83896970-83896989 None:intergenic 75.0%
TTCACGGGTGGGGGTGGGGG+CGG + chr3_2:83897001-83897020 None:intergenic 75.0%
ACTGGGTCCGGGTCCGGGTC+CGG + chr3_2:83898547-83898566 None:intergenic 75.0%
! CATGGCAACGGGGCGGGGCG+GGG - chr3_2:83896849-83896868 Msa0431830:CDS 80.0%
! ATGGCAACGGGGCGGGGCGG+GGG - chr3_2:83896850-83896869 Msa0431830:CDS 80.0%
! ATCCCCGCCGGGTCTGGGGG+CGG + chr3_2:83896929-83896948 None:intergenic 80.0%
! GTGGGGGTGGGGGCGGGTCT+GGG + chr3_2:83896994-83897013 None:intergenic 80.0%
! TCACGGGTGGGGGTGGGGGC+GGG + chr3_2:83897000-83897019 None:intergenic 80.0%
! GTACGGGTACGGGGCGGGGG+CGG - chr3_2:83898455-83898474 Msa0431830:CDS 80.0%
! TACGGGTACGGGGCGGGGGC+GGG - chr3_2:83898456-83898475 Msa0431830:CDS 80.0%
! TGGGTCCGGGTCCGGGTCCG+GGG + chr3_2:83898545-83898564 None:intergenic 80.0%
! CTGGGTCCGGGTCCGGGTCC+GGG + chr3_2:83898546-83898565 None:intergenic 80.0%
! GTGACCCGGCGGGTGCGGGT+TGG - chr3_2:83898608-83898627 Msa0431830:intron 80.0%
! TCCCCGCCGGGTCTGGGGGC+GGG + chr3_2:83896928-83896947 None:intergenic 85.0%
! GGTGGGGGTGGGGGCGGGTC+TGG + chr3_2:83896995-83897014 None:intergenic 85.0%
! ACGGGTACGGGGCGGGGGCG+GGG - chr3_2:83898457-83898476 Msa0431830:CDS 85.0%
! TGCGGGGGCGGGGGTGGGGA+CGG + chr3_2:83898505-83898524 None:intergenic 85.0%
! GGGTGCGGGGGCGGGTGACC+CGG - chr3_2:83898594-83898613 Msa0431830:CDS 85.0%
! TGCGGGGGCGGGTGACCCGG+CGG - chr3_2:83898597-83898616 Msa0431830:CDS 85.0%
! GGCGGGTGACCCGGCGGGTG+CGG - chr3_2:83898603-83898622 Msa0431830:intron 85.0%
! GCGGGTGACCCGGCGGGTGC+GGG - chr3_2:83898604-83898623 Msa0431830:intron 85.0%
! GCAACGGGGCGGGGCGGGGG+CGG - chr3_2:83896853-83896872 Msa0431830:CDS 90.0%
! CAACGGGGCGGGGCGGGGGC+GGG - chr3_2:83896854-83896873 Msa0431830:CDS 90.0%
! CTGGGGGCGGGGGCGGGGCT+GGG + chr3_2:83896916-83896935 None:intergenic 90.0%
! TCTGGGGGCGGGGGCGGGGC+TGG + chr3_2:83896917-83896936 None:intergenic 90.0%
! CGGGTCTGGGGGCGGGGGCG+GGG + chr3_2:83896921-83896940 None:intergenic 90.0%
! CCGGGTCTGGGGGCGGGGGC+GGG + chr3_2:83896922-83896941 None:intergenic 90.0%
! CCCGCCCCCGCCCCCAGACC+CGG - chr3_2:83896919-83896938 Msa0431830:CDS 90.0%
! GCCGGGTCTGGGGGCGGGGG+CGG + chr3_2:83896923-83896942 None:intergenic 90.0%
! GCCCCCGCCCCCAGACCCGG+CGG - chr3_2:83896922-83896941 Msa0431830:CDS 90.0%
! CCCGCCGGGTCTGGGGGCGG+GGG + chr3_2:83896926-83896945 None:intergenic 90.0%
! CCCCCGCCCCCAGACCCGGC+GGG - chr3_2:83896923-83896942 Msa0431830:CDS 90.0%
! CCCCGCCGGGTCTGGGGGCG+GGG + chr3_2:83896927-83896946 None:intergenic 90.0%
! CCCCGCCCCCAGACCCGGCG+GGG - chr3_2:83896924-83896943 Msa0431830:CDS 90.0%
! CGGGTACGGGGCGGGGGCGG+GGG - chr3_2:83898458-83898477 Msa0431830:CDS 90.0%
! GTACGGGGCGGGGGCGGGGG+CGG - chr3_2:83898461-83898480 Msa0431830:CDS 90.0%
! TACGGGGCGGGGGCGGGGGC+GGG - chr3_2:83898462-83898481 Msa0431830:CDS 90.0%
! GGGGGCGGGGGTGGGGACGG+GGG + chr3_2:83898502-83898521 None:intergenic 90.0%
! CGGGGGCGGGGGTGGGGACG+GGG + chr3_2:83898503-83898522 None:intergenic 90.0%
! GCGGGGGCGGGGGTGGGGAC+GGG + chr3_2:83898504-83898523 None:intergenic 90.0%
! GCGGGGGCGGGTGACCCGGC+GGG - chr3_2:83898598-83898617 Msa0431830:intron 90.0%
! ACGGGGCGGGGGCGGGGGCG+GGG - chr3_2:83898463-83898482 Msa0431830:CDS 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83896473 83904960 83896473 ID=Msa0431830;Name=Msa0431830
chr3_2 mRNA 83896473 83904960 83896473 ID=Msa0431830-mRNA-1;Parent=Msa0431830;Name=Msa0431830-mRNA-1;_AED=0.26;_eAED=0.26;_QI=33|0.75|0.4|1|1|1|5|0|995
chr3_2 exon 83896473 83897051 83896473 ID=Msa0431830-mRNA-1:exon:23625;Parent=Msa0431830-mRNA-1
chr3_2 exon 83897402 83897811 83897402 ID=Msa0431830-mRNA-1:exon:23624;Parent=Msa0431830-mRNA-1
chr3_2 exon 83898304 83898616 83898304 ID=Msa0431830-mRNA-1:exon:23623;Parent=Msa0431830-mRNA-1
chr3_2 exon 83898702 83900104 83898702 ID=Msa0431830-mRNA-1:exon:23622;Parent=Msa0431830-mRNA-1
chr3_2 exon 83904645 83904960 83904645 ID=Msa0431830-mRNA-1:exon:23621;Parent=Msa0431830-mRNA-1
chr3_2 five_prime_UTR 83904928 83904960 83904928 ID=Msa0431830-mRNA-1:five_prime_utr;Parent=Msa0431830-mRNA-1
chr3_2 CDS 83904645 83904927 83904645 ID=Msa0431830-mRNA-1:cds;Parent=Msa0431830-mRNA-1
chr3_2 CDS 83898702 83900104 83898702 ID=Msa0431830-mRNA-1:cds;Parent=Msa0431830-mRNA-1
chr3_2 CDS 83898304 83898616 83898304 ID=Msa0431830-mRNA-1:cds;Parent=Msa0431830-mRNA-1
chr3_2 CDS 83897402 83897811 83897402 ID=Msa0431830-mRNA-1:cds;Parent=Msa0431830-mRNA-1
chr3_2 CDS 83896473 83897051 83896473 ID=Msa0431830-mRNA-1:cds;Parent=Msa0431830-mRNA-1
Gene Sequence

>Msa0431830

ATGGATAAGCATAATCCAATAATTCTGAAATTCATGGTTACTTGTTGGTGTCTAGTTAATCTTTTGGGTGGAATATTAGCACAAACTAAAAATGAGAGTAATATTGTAGTGAAAGTGGGAGCTGTAATTGATGTTAGCAGTAATGGAACTGTTGGGAAGATAGGAATGAGCTGCATAAACATGTCACTCTCTGATTTCTATCTCTCTCATTCTCATTACCAAACTAGAATCCAACTCATCGTAAGGGATTCTCATAGGGACGTCGTCACTGCAGCTGCACACGCTTTGGATCTCATTAAAAATGAAGAAGTGCAAGCCATCATGGGGCCAATAACAACAATAGAAACAAATTTCGTGATTCAATTAGGAGACAAAGCTCATGTACCCATTGTAACCTTTTCAGCAACAAGCCCTTCACTTGCATCACTTCAAAGTCCATACTTCTTCCAAATATCACAAACTGATTCAGCTCAAGTAAAAGCCATCACCTCAACTATCCTAGCTTTTGGATGGAAACAAGTGGTCCCCATTTATGTAGACAATAGTTTTGGTGAAGGACTCATTCCATGTTTAACCAATTTTCTTCAACATGCCTACATTCAAGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTCAAGAGCTTTATAAAATAATGACCACTATACCCACTAGAGTATTTGTTGTGCACATGTCACCAATTCTAGGCTCTAAACTTTTTACCTTAGCAAAAAAAATAGGGATGATGAGTCAAGGCTATGTTTGGATAGTAACCGATGGTATGGCTAATTTATTCAATTCATTGAGTTTTGATGTGAGGGAATCAATGGAAGGAGTGTTGGGTGTTAGGACTTATATTCCTAGAACAAAGAAACTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTTGTAAGTGATAATCCAACACTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAAGTTGGAATTGGAAACACCAAATTTGATTACAATGAGAGTAATACATCAAGCAATTATTACATGCCTAATTTTGAAAAGTTTGGTATTTCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAACACTAGATTTAATGGTCTTAGTGGTGATTTTGATGTTGTTGGTGGGAAGTTACAAGCATCAATATATGAGATAATTAATGTGATTGGTGATGGTGAAAAGAGAGTTGGATTTTGGACACCAAATAAAGGGCTATCTCGAAATTTGGACACAGAAGGCCTAATAGGCAATAATAACATGTATTCTAGTTCTAAAAATGATCTTGGGTCAATCATATGGCCAGGTGATATGTACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAATTGAGGATAGGAGTTCCAGTTAAAAATGGATTTAACTACACTGAATTCTTGAAAGTAACATATGATCCTAGTACCAATTCAACACAAGCCACTGGCTTCTGCATTGATATCTTCAAAGCTGTGCTAGATGTTTTGCCTTATGCCTTACCATATGACTTTGTTCGATTTGCAAAGCCTGATGGTGAGATGGCAGGAACCTACAATGAGTTGATCGCTCAACTTTACGACGGGGTAACCTCTTCTTCTCATATAATATCTTCTCCTAAATTTGATGCGGTAGTGGGGGATATAACAATCACTGCAAGTAGGTCAAACTATGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTTTCAATGAAAGACAACAGGAAGAAAAATGCATGGGCCTTTTTGAAGCCACTCACATGGGATCTTTGGGTGACATCAGCATGTTCATTTGTGTTCATTGGATTTGTTGTTTGGGTCCTTGAACATAGAATAAACAATGATTTCAGGGGACCACTCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTCTCAACTATGGTCTATGCTCATAGAGAGAAAGTAGTGAGTAACTTGGCAAGATTTGTGGTGGTTGTATGGGTTTTTGTGGTTCTAATTCTTGTTCAAAGTTACACTGCAAGCTTGACTTCACTCTTGACAGTTGAACAACTAAGGCCAGCTATTACAGACGTACACCAACTTCTAAAGAATAAGATGAATGTCGGCTATCTCAAAGGTTCTTTTGTTTATGGAATTTTGAAGGACTTGGGTTTCGAAGATTCTCATCTCATTACTTATCAATCTGCTGAAGAATGTAATGAGCTTTTTATAAAAGGAAGTGTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTCCCTATATTAAGCACTTTCTTGGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATTTAAAACTGGTGGCTTTGGCTATGCTTTTCCAAAAGGCTCACCTCTTGTGGCTGACATTTCAAGGGCAATCCTAAATGTAACTCAAGGAGACAGAATGAAAACAATTGAGAATGCATGGTTAAAGAAAACTAGTTGTCTAGATTCTAACACAGAAATTTCCTCAAATAACAGTCTTGGACTTGAAAGCTTTTGGGGTCTGTTTCTCATTGCAGGGATTGCTTCCCTATTAGCACTCGTAATCTTTGTTATCACATTCCTATATCAACACAAACACATTTGGTTACCCAATAGTCCAAGTACTTCAATATGGAGACGAATTCGCGTCTTGGTAATGATATTTGATCAAAGAGACTTAAACTCTCACACATTCAAGAAGAGTGGAAATAAAAATGAAAGCAGTAAAAGTCCTCATCATGATGATTTAGGTGCAGTTGAGGCCTCTCCAGGTACACATTGTCCACCTAGTCCATTTAGTCAAACTGAATCAAACGTTTCCTTGAATGACGATTTTAGTCCAAACACAGAATTGGATGTTGTACAAATTACTAATCAGGAAGTTTCCCCTGTGAATAACTGTGAAAGTAACCCCCAAGCAACTTGA
Protein sequence

>Msa0431830

MDKHNPIILKFMVTCWCLVNLLGGILAQTKNESNIVVKVGAVIDVSSNGTVGKIGMSCINMSLSDFYLSHSHYQTRIQLIVRDSHRDVVTAAAHALDLIKNEEVQAIMGPITTIETNFVIQLGDKAHVPIVTFSATSPSLASLQSPYFFQISQTDSAQVKAITSTILAFGWKQVVPIYVDNSFGEGLIPCLTNFLQHAYIQVPYLSAISLSATDDAITQELYKIMTTIPTRVFVVHMSPILGSKLFTLAKKIGMMSQGYVWIVTDGMANLFNSLSFDVRESMEGVLGVRTYIPRTKKLDDFRVRWKRKFVSDNPTLVDTNLNIFGIWAYDATIALAMAIEKVGIGNTKFDYNESNTSSNYYMPNFEKFGISQNGEKLSEALSNTRFNGLSGDFDVVGGKLQASIYEIINVIGDGEKRVGFWTPNKGLSRNLDTEGLIGNNNMYSSSKNDLGSIIWPGDMYSIPKGWEIPTIGKKLRIGVPVKNGFNYTEFLKVTYDPSTNSTQATGFCIDIFKAVLDVLPYALPYDFVRFAKPDGEMAGTYNELIAQLYDGVTSSSHIISSPKFDAVVGDITITASRSNYVDFTMPYTESGVTMVVSMKDNRKKNAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEHRINNDFRGPLSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVVWVFVVLILVQSYTASLTSLLTVEQLRPAITDVHQLLKNKMNVGYLKGSFVYGILKDLGFEDSHLITYQSAEECNELFIKGSVNGGIDAAFDEVPYIKHFLGTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGDRMKTIENAWLKKTSCLDSNTEISSNNSLGLESFWGLFLIAGIASLLALVIFVITFLYQHKHIWLPNSPSTSIWRRIRVLVMIFDQRDLNSHTFKKSGNKNESSKSPHHDDLGAVEASPGTHCPPSPFSQTESNVSLNDDFSPNTELDVVQITNQEVSPVNNCESNPQAT*