Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239420 | XP_013463254.1 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 4.28e-54 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239420 | sp|Q3E902|RS212_ARATH | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.26e-50 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239420 | B7FGU9 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 2.04e-54 | 172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0239420 | 0.869294 | 3.449926e-66 | -8.615850e-47 |
| Msa0003330 | Msa0239420 | 0.895791 | 6.847592e-76 | -8.615850e-47 |
| Msa0027590 | Msa0239420 | 0.879090 | 1.655181e-69 | -8.615850e-47 |
| Msa0042510 | Msa0239420 | 0.855199 | 7.404926e-62 | -8.615850e-47 |
| Msa0044010 | Msa0239420 | 0.805544 | 1.268501e-49 | -8.615850e-47 |
| Msa0072570 | Msa0239420 | 0.837999 | 3.731875e-57 | -8.615850e-47 |
| Msa0075350 | Msa0239420 | 0.834439 | 2.994890e-56 | -8.615850e-47 |
| Msa0079560 | Msa0239420 | 0.838839 | 2.265981e-57 | -8.615850e-47 |
| Msa0094210 | Msa0239420 | 0.817396 | 3.369531e-52 | -8.615850e-47 |
| Msa0114570 | Msa0239420 | 0.803784 | 2.954706e-49 | -8.615850e-47 |
| Msa0123290 | Msa0239420 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0127230 | Msa0239420 | 0.825628 | 4.225541e-54 | -8.615850e-47 |
| Msa0128330 | Msa0239420 | 0.808070 | 3.709905e-50 | -8.615850e-47 |
| Msa0132460 | Msa0239420 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0134580 | Msa0239420 | 0.805932 | 1.051532e-49 | -8.615850e-47 |
| Msa0167860 | Msa0239420 | 0.890300 | 1.115963e-73 | -8.615850e-47 |
| Msa0168320 | Msa0239420 | 0.876347 | 1.501612e-68 | -8.615850e-47 |
| Msa0169710 | Msa0239420 | 0.803652 | 3.147492e-49 | -8.615850e-47 |
| Msa0182050 | Msa0239420 | 0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa0182100 | Msa0239420 | 0.811093 | 8.318652e-51 | -8.615850e-47 |
| Msa0183840 | Msa0239420 | 0.828859 | 7.113430e-55 | -8.615850e-47 |
| Msa0188740 | Msa0239420 | 0.816677 | 4.888057e-52 | -8.615850e-47 |
| Msa0191450 | Msa0239420 | 0.876425 | 1.411274e-68 | -8.615850e-47 |
| Msa0191550 | Msa0239420 | 0.876184 | 1.708303e-68 | -8.615850e-47 |
| Msa0192300 | Msa0239420 | 0.858981 | 5.670075e-63 | -8.615850e-47 |
| Msa0194940 | Msa0239420 | 0.801801 | 7.587250e-49 | -8.615850e-47 |
| Msa0195030 | Msa0239420 | 0.870516 | 1.375195e-66 | -8.615850e-47 |
| Msa0219090 | Msa0239420 | 0.800478 | 1.414355e-48 | -8.615850e-47 |
| Msa0233550 | Msa0239420 | 0.909327 | 6.440974e-82 | -8.615850e-47 |
| Msa0237180 | Msa0239420 | 0.851602 | 7.975554e-61 | -8.615850e-47 |
| Msa0239420 | Msa0270160 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
| Msa0239420 | Msa0274940 | 0.871898 | 4.810223e-67 | -8.615850e-47 |
| Msa0239420 | Msa0277600 | 0.823995 | 1.025914e-53 | -8.615850e-47 |
| Msa0239420 | Msa0281330 | 0.843745 | 1.159583e-58 | -8.615850e-47 |
| Msa0239420 | Msa0281370 | 0.917153 | 7.508455e-86 | -8.615850e-47 |
| Msa0239420 | Msa0301250 | 0.859718 | 3.407335e-63 | -8.615850e-47 |
| Msa0239420 | Msa0313060 | 0.870146 | 1.818597e-66 | -8.615850e-47 |
| Msa0239420 | Msa0315430 | 0.840511 | 8.320216e-58 | -8.615850e-47 |
| Msa0239420 | Msa0315660 | 0.854501 | 1.180109e-61 | -8.615850e-47 |
| Msa0239420 | Msa0340560 | 0.818810 | 1.614176e-52 | -8.615850e-47 |
| Msa0239420 | Msa0371490 | 0.872954 | 2.138406e-67 | -8.615850e-47 |
| Msa0239420 | Msa0376850 | 0.859995 | 2.811330e-63 | -8.615850e-47 |
| Msa0239420 | Msa0377520 | 0.875976 | 2.014128e-68 | -8.615850e-47 |
| Msa0239420 | Msa0382670 | 0.891052 | 5.646672e-74 | -8.615850e-47 |
| Msa0239420 | Msa0387290 | 0.806323 | 8.697089e-50 | -8.615850e-47 |
| Msa0239420 | Msa0388520 | 0.825645 | 4.187943e-54 | -8.615850e-47 |
| Msa0239420 | Msa0389800 | 0.828385 | 9.258066e-55 | -8.615850e-47 |
| Msa0239420 | Msa0416470 | 0.864530 | 1.137799e-64 | -8.615850e-47 |
| Msa0239420 | Msa0426090 | 0.838402 | 2.938543e-57 | -8.615850e-47 |
| Msa0239420 | Msa0426250 | 0.804755 | 1.854844e-49 | -8.615850e-47 |
| Msa0239420 | Msa0428530 | -0.810469 | 1.135192e-50 | -8.615850e-47 |
| Msa0239420 | Msa0468140 | 0.825524 | 4.473575e-54 | -8.615850e-47 |
| Msa0239420 | Msa0472480 | 0.841664 | 4.143814e-58 | -8.615850e-47 |
| Msa0239420 | Msa0481520 | 0.823529 | 1.319098e-53 | -8.615850e-47 |
| Msa0239420 | Msa0485220 | 0.847885 | 8.710179e-60 | -8.615850e-47 |
| Msa0239420 | Msa0511760 | 0.863994 | 1.672839e-64 | -8.615850e-47 |
| Msa0239420 | Msa0516830 | 0.859938 | 2.924197e-63 | -8.615850e-47 |
| Msa0239420 | Msa0517480 | 0.865213 | 6.951160e-65 | -8.615850e-47 |
| Msa0239420 | Msa0547920 | 0.853180 | 2.833270e-61 | -8.615850e-47 |
| Msa0239420 | Msa0573550 | 0.879960 | 8.130626e-70 | -8.615850e-47 |
| Msa0239420 | Msa0574780 | 0.854154 | 1.487179e-61 | -8.615850e-47 |
| Msa0239420 | Msa0578010 | 0.802850 | 4.613694e-49 | -8.615850e-47 |
| Msa0239420 | Msa0582070 | 0.822777 | 1.975795e-53 | -8.615850e-47 |
| Msa0239420 | Msa0597240 | 0.840271 | 9.616669e-58 | -8.615850e-47 |
| Msa0239420 | Msa0602900 | 0.851247 | 1.005078e-60 | -8.615850e-47 |
| Msa0239420 | Msa0605890 | 0.837327 | 5.548560e-57 | -8.615850e-47 |
| Msa0239420 | Msa0619230 | 0.897340 | 1.545490e-76 | -8.615850e-47 |
| Msa0239420 | Msa0621190 | 0.868791 | 5.020901e-66 | -8.615850e-47 |
| Msa0239420 | Msa0623370 | 0.801055 | 1.078527e-48 | -8.615850e-47 |
| Msa0239420 | Msa0643960 | 0.851860 | 6.738787e-61 | -8.615850e-47 |
| Msa0239420 | Msa0649890 | 0.802807 | 4.708603e-49 | -8.615850e-47 |
| Msa0239420 | Msa0656450 | 0.836098 | 1.141767e-56 | -8.615850e-47 |
| Msa0239420 | Msa0681220 | 0.825350 | 4.918440e-54 | -8.615850e-47 |
| Msa0239420 | Msa0686550 | 0.858039 | 1.082848e-62 | -8.615850e-47 |
| Msa0239420 | Msa0691760 | 0.843136 | 1.686880e-58 | -8.615850e-47 |
| Msa0239420 | Msa0694400 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa0239420 | Msa0704860 | 0.817231 | 3.670282e-52 | -8.615850e-47 |
| Msa0239420 | Msa0705800 | 0.819651 | 1.038550e-52 | -8.615850e-47 |
| Msa0239420 | Msa0708630 | 0.803409 | 3.534812e-49 | -8.615850e-47 |
| Msa0239420 | Msa0724530 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0239420 | Msa0752240 | 0.852850 | 3.521328e-61 | -8.615850e-47 |
| Msa0239420 | Msa0758420 | 0.854350 | 1.305041e-61 | -8.615850e-47 |
| Msa0239420 | Msa0788380 | 0.847531 | 1.090041e-59 | -8.615850e-47 |
| Msa0239420 | Msa0790450 | 0.830977 | 2.166704e-55 | -8.615850e-47 |
| Msa0239420 | Msa0822580 | 0.854024 | 1.620988e-61 | -8.615850e-47 |
| Msa0239420 | Msa0834220 | 0.819497 | 1.125878e-52 | -8.615850e-47 |
| Msa0239420 | Msa0838070 | 0.813889 | 2.036788e-51 | -8.615850e-47 |
| Msa0239420 | Msa0880050 | 0.831682 | 1.453173e-55 | -8.615850e-47 |
| Msa0239420 | Msa0929680 | 0.852962 | 3.271615e-61 | -8.615850e-47 |
| Msa0239420 | Msa0929700 | 0.888815 | 4.223235e-73 | -8.615850e-47 |
| Msa0239420 | Msa0929790 | 0.813377 | 2.639214e-51 | -8.615850e-47 |
| Msa0239420 | Msa0930360 | 0.848368 | 6.409885e-60 | -8.615850e-47 |
| Msa0239420 | Msa0930790 | 0.859987 | 2.826126e-63 | -8.615850e-47 |
| Msa0239420 | Msa0930890 | 0.809234 | 2.092915e-50 | -8.615850e-47 |
| Msa0239420 | Msa0982260 | 0.829283 | 5.613180e-55 | -8.615850e-47 |
| Msa0239420 | Msa1040160 | 0.809419 | 1.910039e-50 | -8.615850e-47 |
| Msa0239420 | Msa1041680 | 0.827055 | 1.932249e-54 | -8.615850e-47 |
| Msa0239420 | Msa1054280 | 0.855923 | 4.553241e-62 | -8.615850e-47 |
| Msa0239420 | Msa1082170 | 0.846931 | 1.593093e-59 | -8.615850e-47 |
| Msa0239420 | Msa1116940 | 0.813662 | 2.285391e-51 | -8.615850e-47 |
| Msa0239420 | Msa1124980 | 0.833898 | 4.093707e-56 | -8.615850e-47 |
| Msa0239420 | Msa1126690 | 0.813103 | 3.032171e-51 | -8.615850e-47 |
| Msa0239420 | Msa1131030 | 0.818318 | 2.086420e-52 | -8.615850e-47 |
| Msa0239420 | Msa1152860 | 0.813519 | 2.457349e-51 | -8.615850e-47 |
| Msa0239420 | Msa1156830 | 0.830862 | 2.311611e-55 | -8.615850e-47 |
| Msa0239420 | Msa1164150 | 0.819245 | 1.284995e-52 | -8.615850e-47 |
| Msa0239420 | Msa1166570 | 0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa0239420 | Msa1167360 | 0.835249 | 1.872794e-56 | -8.615850e-47 |
| Msa0239420 | Msa1180000 | 0.836153 | 1.105362e-56 | -8.615850e-47 |
| Msa0239420 | Msa1186030 | 0.871354 | 7.285288e-67 | -8.615850e-47 |
| Msa0239420 | Msa1206240 | 0.809807 | 1.576524e-50 | -8.615850e-47 |
| Msa0239420 | Msa1213850 | 0.832954 | 7.036955e-56 | -8.615850e-47 |
| Msa0239420 | Msa1218170 | 0.835369 | 1.746917e-56 | -8.615850e-47 |
| Msa0239420 | Msa1225040 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0239420 | Msa1235950 | 0.872003 | 4.440515e-67 | -8.615850e-47 |
| Msa0239420 | Msa1235980 | 0.880494 | 5.242065e-70 | -8.615850e-47 |
| Msa0239420 | Msa1237040 | 0.861178 | 1.231389e-63 | -8.615850e-47 |
| Msa0239420 | Msa1240270 | 0.869676 | 2.589325e-66 | -8.615850e-47 |
| Msa0239420 | Msa1258540 | 0.856814 | 2.494863e-62 | -8.615850e-47 |
| Msa0239420 | Msa1263620 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa0239420 | Msa1270640 | 0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa0239420 | Msa1270710 | 0.820573 | 6.387630e-53 | -8.615850e-47 |
| Msa0239420 | Msa1301640 | 0.810733 | 9.950606e-51 | -8.615850e-47 |
| Msa0239420 | Msa1307730 | 0.830909 | 2.251572e-55 | -8.615850e-47 |
| Msa0239420 | Msa1316100 | 0.848470 | 6.006555e-60 | -8.615850e-47 |
| Msa0239420 | Msa1317390 | 0.891832 | 2.771606e-74 | -8.615850e-47 |
| Msa0239420 | Msa1329930 | 0.801994 | 6.922179e-49 | -8.615850e-47 |
| Msa0239420 | Msa1351020 | 0.881936 | 1.585418e-70 | -8.615850e-47 |
| Msa0239420 | Msa1363910 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
| Msa0239420 | Msa1368920 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0239420 | Msa1387750 | 0.850268 | 1.894926e-60 | -8.615850e-47 |
| Msa0239420 | Msa1390760 | 0.896421 | 3.749565e-76 | -8.615850e-47 |
| Msa0239420 | Msa1407550 | 0.877668 | 5.225959e-69 | -8.615850e-47 |
| Msa0239420 | Msa1413570 | 0.839034 | 2.017099e-57 | -8.615850e-47 |
| Msa0239420 | Msa1421510 | 0.800906 | 1.156780e-48 | -8.615850e-47 |
| Msa0239420 | Msa1423050 | 0.830011 | 3.733451e-55 | -8.615850e-47 |
| Msa0239420 | Msa1425070 | 0.820461 | 6.777499e-53 | -8.615850e-47 |
| Msa0239420 | Msa1432310 | 0.836632 | 8.351206e-57 | -8.615850e-47 |
| Msa0239420 | Msa1446410 | 0.834689 | 2.592473e-56 | -8.615850e-47 |
| Msa0239420 | Msa1449160 | 0.811602 | 6.450636e-51 | -8.615850e-47 |
| Msa0239420 | Msa1450560 | 0.834597 | 2.734203e-56 | -8.615850e-47 |
| Msa0239420 | Msa1453530 | 0.856399 | 3.302547e-62 | -8.615850e-47 |
| Msa0239420 | Msa1463570 | 0.804280 | 2.329826e-49 | -8.615850e-47 |
| Msa0239420 | Msa1465700 | 0.893306 | 7.104507e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239420 | MtrunA17_Chr2g0295971 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 3.94e-58 | 172 |
| Msa0239420 | MtrunA17_Chr7g0246911 | 93.827 | 81 | 5 | 0 | 1 | 81 | 26 | 106 | 2.70e-55 | 166 |
| Msa0239420 | MtrunA17_Chr4g0001451 | 68.627 | 51 | 14 | 2 | 6 | 54 | 18 | 68 | 4.35e-16 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239420 | AT5G27700.1 | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.41e-51 | 154 |
| Msa0239420 | AT3G53890.2 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
| Msa0239420 | AT3G53890.1 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
Find 26 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCGTTCTGCATCTTT+AGG | 0.132539 | 2_2:-13762600 | None:intergenic |
| TTCTTCGTTCTGCATCTTTA+GGG | 0.265310 | 2_2:-13762599 | None:intergenic |
| TACCAAATGAATTTCAAAAT+AGG | 0.353340 | 2_2:-13764450 | None:intergenic |
| TCAGCTGAACATAGGTCATT+TGG | 0.363523 | 2_2:+13762795 | Msa0239420:CDS |
| CTGTTTGCATCTCTCTCATC+TGG | 0.389759 | 2_2:+13762425 | Msa0239420:five_prime_UTR |
| GTTTCAGTTCTGCTACAAAC+AGG | 0.431981 | 2_2:+13762743 | Msa0239420:intron |
| TGAAGCACTTAAGCAAACTT+AGG | 0.448126 | 2_2:-13764488 | None:intergenic |
| CTGTGGCTTCACCCGTGCTC+AGG | 0.453938 | 2_2:+13762861 | Msa0239420:CDS |
| AAAAGTTCATACCACTTCCT+AGG | 0.458041 | 2_2:-13762646 | None:intergenic |
| TCACCGAGCTCTACATTCCT+AGG | 0.480407 | 2_2:+13762629 | Msa0239420:CDS |
| GAAGCCACAGAGAGCAAAAG+TGG | 0.501571 | 2_2:-13762848 | None:intergenic |
| TGCAAACAGACGCAAAGCAG+AGG | 0.502010 | 2_2:-13762411 | None:intergenic |
| CTAAAGATGCAGAACGAAGA+AGG | 0.519629 | 2_2:+13762601 | Msa0239420:exon |
| ACAGTGGAATTGATCGCCTA+TGG | 0.527769 | 2_2:+13764294 | Msa0239420:CDS |
| AGCTCTACATTCCTAGGAAG+TGG | 0.545691 | 2_2:+13762635 | Msa0239420:CDS |
| TTGTGTCTACTGCTTAAGCT+CGG | 0.554847 | 2_2:-13764330 | None:intergenic |
| AAACAGGCTTATTACTGCTA+AGG | 0.565079 | 2_2:+13762759 | Msa0239420:CDS |
| GCATCAGTTCAGCTGAACAT+AGG | 0.573016 | 2_2:+13762787 | Msa0239420:CDS |
| GCAAACAGACGCAAAGCAGA+GGG | 0.591865 | 2_2:-13762410 | None:intergenic |
| GATGAGAGCGGTGTTTACAA+TGG | 0.604206 | 2_2:+13762817 | Msa0239420:CDS |
| ACAAATGGATACCTGAGCAC+GGG | 0.612936 | 2_2:-13762872 | None:intergenic |
| AACAGACGCAAAGCAGAGGG+AGG | 0.626207 | 2_2:-13762407 | None:intergenic |
| TTTCAGGGAGATGCTGACAG+TGG | 0.628229 | 2_2:+13764278 | Msa0239420:intron |
| CTTCCTAGGAATGTAGAGCT+CGG | 0.633169 | 2_2:-13762632 | None:intergenic |
| AACAAATGGATACCTGAGCA+CGG | 0.637714 | 2_2:-13762873 | None:intergenic |
| ATAGGTCATTTGGATGAGAG+CGG | 0.690184 | 2_2:+13762805 | Msa0239420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_2:13763282-13763301 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_2:13763647-13763666 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_2:13763646-13763665 | Msa0239420:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_2:13763647-13763666 | Msa0239420:intron | 10.0% |
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_2:13763282-13763301 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_2:13763647-13763666 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_2:13763646-13763665 | Msa0239420:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_2:13763647-13763666 | Msa0239420:intron | 10.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_2:13763327-13763346 | Msa0239420:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_2:13763552-13763571 | Msa0239420:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_2:13763611-13763630 | Msa0239420:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_2:13763618-13763637 | None:intergenic | 15.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_2:13763327-13763346 | Msa0239420:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_2:13763552-13763571 | Msa0239420:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_2:13763611-13763630 | Msa0239420:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_2:13763618-13763637 | None:intergenic | 15.0% |
| !! | TGAATTCAGAGTAAATAATT+AGG | + | chr2_2:13762942-13762961 | Msa0239420:intron | 20.0% |
| !! | GAATTCAGAGTAAATAATTA+GGG | + | chr2_2:13762943-13762962 | Msa0239420:intron | 20.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_2:13763725-13763744 | Msa0239420:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_2:13763749-13763768 | Msa0239420:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_2:13763753-13763772 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_2:13763891-13763910 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_2:13763891-13763910 | Msa0239420:intron | 20.0% |
| !! | TATAGAGTAGTTATAATATG+CGG | - | chr2_2:13763995-13764014 | None:intergenic | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_2:13764453-13764472 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_2:13764459-13764478 | Msa0239420:three_prime_UTR | 20.0% |
| !! | TGAATTCAGAGTAAATAATT+AGG | + | chr2_2:13762942-13762961 | Msa0239420:intron | 20.0% |
| !! | GAATTCAGAGTAAATAATTA+GGG | + | chr2_2:13762943-13762962 | Msa0239420:intron | 20.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_2:13763725-13763744 | Msa0239420:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_2:13763749-13763768 | Msa0239420:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_2:13763753-13763772 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_2:13763891-13763910 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_2:13763891-13763910 | Msa0239420:intron | 20.0% |
| !! | TATAGAGTAGTTATAATATG+CGG | - | chr2_2:13763995-13764014 | None:intergenic | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_2:13764453-13764472 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_2:13764459-13764478 | Msa0239420:three_prime_UTR | 20.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_2:13762578-13762597 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_2:13762716-13762735 | Msa0239420:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_2:13762909-13762928 | Msa0239420:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_2:13763334-13763353 | Msa0239420:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_2:13763584-13763603 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_2:13763726-13763745 | Msa0239420:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_2:13763807-13763826 | Msa0239420:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_2:13763886-13763905 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_2:13764185-13764204 | Msa0239420:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_2:13764193-13764212 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_2:13764262-13764281 | Msa0239420:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_2:13764263-13764282 | Msa0239420:intron | 25.0% |
| !! | TCAACTTTTGTTAGAGATAT+TGG | + | chr2_2:13764401-13764420 | Msa0239420:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_2:13764448-13764467 | Msa0239420:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_2:13764527-13764546 | Msa0239420:three_prime_UTR | 25.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_2:13762578-13762597 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_2:13762716-13762735 | Msa0239420:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_2:13762909-13762928 | Msa0239420:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_2:13763334-13763353 | Msa0239420:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_2:13763584-13763603 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_2:13763726-13763745 | Msa0239420:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_2:13763807-13763826 | Msa0239420:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_2:13763886-13763905 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_2:13764185-13764204 | Msa0239420:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_2:13764193-13764212 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_2:13764262-13764281 | Msa0239420:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_2:13764263-13764282 | Msa0239420:intron | 25.0% |
| !! | TCAACTTTTGTTAGAGATAT+TGG | + | chr2_2:13764401-13764420 | Msa0239420:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_2:13764448-13764467 | Msa0239420:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_2:13764527-13764546 | Msa0239420:three_prime_UTR | 25.0% |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_2:13762888-13762907 | Msa0239420:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_2:13763227-13763246 | Msa0239420:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_2:13763475-13763494 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_2:13763758-13763777 | Msa0239420:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_2:13763773-13763792 | Msa0239420:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_2:13763812-13763831 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_2:13763951-13763970 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_2:13764153-13764172 | Msa0239420:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_2:13764154-13764173 | Msa0239420:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_2:13764220-13764239 | Msa0239420:intron | 30.0% | |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_2:13762888-13762907 | Msa0239420:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_2:13763227-13763246 | Msa0239420:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_2:13763475-13763494 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_2:13763758-13763777 | Msa0239420:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_2:13763773-13763792 | Msa0239420:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_2:13763812-13763831 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_2:13763951-13763970 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_2:13764153-13764172 | Msa0239420:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_2:13764154-13764173 | Msa0239420:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_2:13764220-13764239 | Msa0239420:intron | 30.0% | |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_2:13762602-13762621 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_2:13762649-13762668 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_2:13762759-13762778 | Msa0239420:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_2:13762890-13762909 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_2:13762899-13762918 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_2:13763043-13763062 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_2:13763370-13763389 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_2:13763371-13763390 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_2:13763380-13763399 | Msa0239420:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_2:13763388-13763407 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_2:13763679-13763698 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_2:13763745-13763764 | None:intergenic | 35.0% | |
| !! | ACTCGTCAAAGTATTTTCCA+AGG | - | chr2_2:13764240-13764259 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_2:13764491-13764510 | None:intergenic | 35.0% |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_2:13762602-13762621 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_2:13762649-13762668 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_2:13762759-13762778 | Msa0239420:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_2:13762890-13762909 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_2:13762899-13762918 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_2:13763043-13763062 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_2:13763370-13763389 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_2:13763371-13763390 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_2:13763380-13763399 | Msa0239420:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_2:13763388-13763407 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_2:13763679-13763698 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_2:13763745-13763764 | None:intergenic | 35.0% | |
| !! | ACTCGTCAAAGTATTTTCCA+AGG | - | chr2_2:13764240-13764259 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_2:13764491-13764510 | None:intergenic | 35.0% |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_2:13762603-13762622 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_2:13762601-13762620 | Msa0239420:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_2:13762743-13762762 | Msa0239420:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_2:13762795-13762814 | Msa0239420:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_2:13762805-13762824 | Msa0239420:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_2:13762876-13762895 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_2:13763035-13763054 | Msa0239420:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_2:13763036-13763055 | Msa0239420:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_2:13763387-13763406 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_2:13763497-13763516 | Msa0239420:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_2:13764013-13764032 | Msa0239420:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_2:13764160-13764179 | Msa0239420:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_2:13764333-13764352 | None:intergenic | 40.0% | |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_2:13762603-13762622 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_2:13762601-13762620 | Msa0239420:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_2:13762743-13762762 | Msa0239420:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_2:13762795-13762814 | Msa0239420:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_2:13762805-13762824 | Msa0239420:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_2:13762876-13762895 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_2:13763035-13763054 | Msa0239420:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_2:13763036-13763055 | Msa0239420:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_2:13763387-13763406 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_2:13763497-13763516 | Msa0239420:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_2:13764013-13764032 | Msa0239420:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_2:13764160-13764179 | Msa0239420:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_2:13764333-13764352 | None:intergenic | 40.0% | |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_2:13762425-13762444 | Msa0239420:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_2:13762635-13762654 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_2:13762635-13762654 | Msa0239420:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_2:13762787-13762806 | Msa0239420:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_2:13762817-13762836 | Msa0239420:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_2:13762844-13762863 | Msa0239420:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_2:13762875-13762894 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_2:13763158-13763177 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_2:13763424-13763443 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_2:13763436-13763455 | Msa0239420:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_2:13763448-13763467 | Msa0239420:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_2:13764294-13764313 | Msa0239420:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_2:13764313-13764332 | None:intergenic | 45.0% |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_2:13762425-13762444 | Msa0239420:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_2:13762635-13762654 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_2:13762635-13762654 | Msa0239420:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_2:13762787-13762806 | Msa0239420:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_2:13762817-13762836 | Msa0239420:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_2:13762844-13762863 | Msa0239420:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_2:13762875-13762894 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_2:13763158-13763177 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_2:13763424-13763443 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_2:13763436-13763455 | Msa0239420:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_2:13763448-13763467 | Msa0239420:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_2:13764294-13764313 | Msa0239420:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_2:13764313-13764332 | None:intergenic | 45.0% |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_2:13764086-13764105 | Msa0239420:intron | 5.0% |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_2:13764086-13764105 | Msa0239420:intron | 5.0% |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_2:13762413-13762432 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_2:13762414-13762433 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_2:13762629-13762648 | Msa0239420:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_2:13762851-13762870 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_2:13763147-13763166 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_2:13763147-13763166 | Msa0239420:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_2:13763425-13763444 | Msa0239420:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_2:13763440-13763459 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_2:13763446-13763465 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_2:13763447-13763466 | Msa0239420:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_2:13764278-13764297 | Msa0239420:intron | 50.0% | |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_2:13762413-13762432 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_2:13762414-13762433 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_2:13762629-13762648 | Msa0239420:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_2:13762851-13762870 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_2:13763147-13763166 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_2:13763147-13763166 | Msa0239420:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_2:13763425-13763444 | Msa0239420:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_2:13763440-13763459 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_2:13763446-13763465 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_2:13763447-13763466 | Msa0239420:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_2:13764278-13764297 | Msa0239420:intron | 50.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_2:13762410-13762429 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_2:13763132-13763151 | Msa0239420:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_2:13763148-13763167 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_2:13763146-13763165 | Msa0239420:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_2:13763462-13763481 | None:intergenic | 55.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_2:13762410-13762429 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_2:13763132-13763151 | Msa0239420:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_2:13763148-13763167 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_2:13763146-13763165 | Msa0239420:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_2:13763462-13763481 | None:intergenic | 55.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_2:13763142-13763161 | Msa0239420:intron | 60.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_2:13763142-13763161 | Msa0239420:intron | 60.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_2:13762861-13762880 | Msa0239420:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_2:13763140-13763159 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_2:13763141-13763160 | None:intergenic | 65.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_2:13762861-13762880 | Msa0239420:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_2:13763140-13763159 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_2:13763141-13763160 | None:intergenic | 65.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_2:13763137-13763156 | Msa0239420:intron | 70.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_2:13763137-13763156 | Msa0239420:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 13762406 | 13764581 | 13762406 | ID=Msa0239420;Name=Msa0239420 |
| chr2_2 | mRNA | 13762406 | 13764581 | 13762406 | ID=Msa0239420-mRNA-1;Parent=Msa0239420;Name=Msa0239420-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|1|1|1|0.66|0.5|4|235|81 |
| chr2_2 | exon | 13762406 | 13762446 | 13762406 | ID=Msa0239420-mRNA-1:exon:5689;Parent=Msa0239420-mRNA-1 |
| chr2_2 | exon | 13762565 | 13762656 | 13762565 | ID=Msa0239420-mRNA-1:exon:5690;Parent=Msa0239420-mRNA-1 |
| chr2_2 | exon | 13762750 | 13762882 | 13762750 | ID=Msa0239420-mRNA-1:exon:5691;Parent=Msa0239420-mRNA-1 |
| chr2_2 | exon | 13764284 | 13764581 | 13764284 | ID=Msa0239420-mRNA-1:exon:5692;Parent=Msa0239420-mRNA-1 |
| chr2_2 | five_prime_UTR | 13762406 | 13762446 | 13762406 | ID=Msa0239420-mRNA-1:five_prime_utr;Parent=Msa0239420-mRNA-1 |
| chr2_2 | five_prime_UTR | 13762565 | 13762606 | 13762565 | ID=Msa0239420-mRNA-1:five_prime_utr;Parent=Msa0239420-mRNA-1 |
| chr2_2 | CDS | 13762607 | 13762656 | 13762607 | ID=Msa0239420-mRNA-1:cds;Parent=Msa0239420-mRNA-1 |
| chr2_2 | CDS | 13762750 | 13762882 | 13762750 | ID=Msa0239420-mRNA-1:cds;Parent=Msa0239420-mRNA-1 |
| chr2_2 | CDS | 13764284 | 13764346 | 13764284 | ID=Msa0239420-mRNA-1:cds;Parent=Msa0239420-mRNA-1 |
| chr2_2 | three_prime_UTR | 13764347 | 13764581 | 13764347 | ID=Msa0239420-mRNA-1:three_prime_utr;Parent=Msa0239420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
