AlfalfaGEDB | Msa0511760

M. sativa cultivar zhongmu-4 / Msa0511760

KEGG: K02877
GO: -
PFAM: PF00827.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0511760	XP_013461067.1	100.000	204	0	0	1	204	1	204	7.37e-146	414

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0511760	sp\|O82528\|RL15_PETHY	88.235	204	24	0	1	204	1	204	7.90e-131	369

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0511760	I3T9M3	100.000	204	0	0	1	204	1	204	3.52e-146	414

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0511760	0.888344	6.416237e-73	-8.615850e-47
Msa0003030	Msa0511760	0.816171	6.345393e-52	-8.615850e-47
Msa0003330	Msa0511760	0.868991	4.324330e-66	-8.615850e-47
Msa0020870	Msa0511760	0.811316	7.442242e-51	-8.615850e-47
Msa0027590	Msa0511760	0.840704	7.407665e-58	-8.615850e-47
Msa0037230	Msa0511760	0.808195	3.489854e-50	-8.615850e-47
Msa0042510	Msa0511760	0.874656	5.693479e-68	-8.615850e-47
Msa0079560	Msa0511760	0.874954	4.510223e-68	-8.615850e-47
Msa0086160	Msa0511760	0.811547	6.627875e-51	-8.615850e-47
Msa0089540	Msa0511760	0.803666	3.126726e-49	-8.615850e-47
Msa0094210	Msa0511760	0.815100	1.098809e-51	-8.615850e-47
Msa0116600	Msa0511760	0.821614	3.676159e-53	-8.615850e-47
Msa0116690	Msa0511760	0.818586	1.814820e-52	-8.615850e-47
Msa0123290	Msa0511760	0.808372	3.198543e-50	-8.615850e-47
Msa0127230	Msa0511760	0.867385	1.422526e-65	-8.615850e-47
Msa0128330	Msa0511760	0.854389	1.271567e-61	-8.615850e-47
Msa0132460	Msa0511760	0.881047	3.320274e-70	-8.615850e-47
Msa0134580	Msa0511760	0.811454	6.944227e-51	-8.615850e-47
Msa0146910	Msa0511760	0.813328	2.705614e-51	-8.615850e-47
Msa0167860	Msa0511760	0.860854	1.544927e-63	-8.615850e-47
Msa0168320	Msa0511760	0.869631	2.678953e-66	-8.615850e-47
Msa0174580	Msa0511760	0.843356	1.473354e-58	-8.615850e-47
Msa0182050	Msa0511760	0.883956	2.891118e-71	-8.615850e-47
Msa0182100	Msa0511760	0.904482	1.172720e-79	-8.615850e-47
Msa0188740	Msa0511760	0.836601	8.506904e-57	-8.615850e-47
Msa0191450	Msa0511760	0.814190	1.747999e-51	-8.615850e-47
Msa0191550	Msa0511760	0.829781	4.248859e-55	-8.615850e-47
Msa0192300	Msa0511760	0.890311	1.104602e-73	-8.615850e-47
Msa0195030	Msa0511760	0.819463	1.146165e-52	-8.615850e-47
Msa0216200	Msa0511760	0.813160	2.946585e-51	-8.615850e-47
Msa0219090	Msa0511760	0.803602	3.224158e-49	-8.615850e-47
Msa0233550	Msa0511760	0.870033	1.980691e-66	-8.615850e-47
Msa0237180	Msa0511760	0.811618	6.397980e-51	-8.615850e-47
Msa0371490	Msa0511760	0.913189	8.204762e-84	-8.615850e-47
Msa0373350	Msa0511760	0.848436	6.138129e-60	-8.615850e-47
Msa0376850	Msa0511760	0.863547	2.303559e-64	-8.615850e-47
Msa0377370	Msa0511760	0.804891	1.737369e-49	-8.615850e-47
Msa0377520	Msa0511760	0.886659	2.821419e-72	-8.615850e-47
Msa0382670	Msa0511760	0.871158	8.459538e-67	-8.615850e-47
Msa0387290	Msa0511760	0.867296	1.519353e-65	-8.615850e-47
Msa0388520	Msa0511760	0.839433	1.589193e-57	-8.615850e-47
Msa0389800	Msa0511760	0.804075	2.570691e-49	-8.615850e-47
Msa0416470	Msa0511760	0.857259	1.843148e-62	-8.615850e-47
Msa0421920	Msa0511760	0.822089	2.854251e-53	-8.615850e-47
Msa0426090	Msa0511760	0.823842	1.113901e-53	-8.615850e-47
Msa0426250	Msa0511760	0.802784	4.759627e-49	-8.615850e-47
Msa0432260	Msa0511760	-0.821616	3.673696e-53	-8.615850e-47
Msa0436830	Msa0511760	-0.807512	4.874768e-50	-8.615850e-47
Msa0469430	Msa0511760	0.804192	2.430404e-49	-8.615850e-47
Msa0472480	Msa0511760	0.826506	2.613364e-54	-8.615850e-47
Msa0481520	Msa0511760	0.806211	9.183067e-50	-8.615850e-47
Msa0239420	Msa0511760	0.863994	1.672839e-64	-8.615850e-47
Msa0256350	Msa0511760	0.833233	5.999565e-56	-8.615850e-47
Msa0264640	Msa0511760	0.805215	1.486563e-49	-8.615850e-47
Msa0270160	Msa0511760	0.848661	5.316237e-60	-8.615850e-47
Msa0274940	Msa0511760	0.844778	6.122327e-59	-8.615850e-47
Msa0277600	Msa0511760	0.860775	1.633047e-63	-8.615850e-47
Msa0281370	Msa0511760	0.824085	9.768560e-54	-8.615850e-47
Msa0301250	Msa0511760	0.896704	2.855814e-76	-8.615850e-47
Msa0313060	Msa0511760	0.901349	2.930800e-78	-8.615850e-47
Msa0315430	Msa0511760	0.870333	1.580099e-66	-8.615850e-47
Msa0315660	Msa0511760	0.822490	2.304277e-53	-8.615850e-47
Msa0485220	Msa0511760	0.807773	4.291295e-50	-8.615850e-47
Msa0500420	Msa0511760	0.803649	3.151282e-49	-8.615850e-47
Msa0511760	Msa0516830	0.863991	1.675862e-64	-8.615850e-47
Msa0511760	Msa0517480	0.846909	1.614736e-59	-8.615850e-47
Msa0511760	Msa0521730	0.813852	2.074891e-51	-8.615850e-47
Msa0511760	Msa0547920	0.859123	5.140013e-63	-8.615850e-47
Msa0511760	Msa0573550	0.894337	2.712583e-75	-8.615850e-47
Msa0511760	Msa0574780	0.862699	4.211727e-64	-8.615850e-47
Msa0511760	Msa0578010	0.872302	3.529160e-67	-8.615850e-47
Msa0511760	Msa0597240	0.835296	1.822737e-56	-8.615850e-47
Msa0511760	Msa0602900	0.862670	4.299177e-64	-8.615850e-47
Msa0511760	Msa0605600	0.825741	3.972736e-54	-8.615850e-47
Msa0511760	Msa0605890	0.807051	6.104359e-50	-8.615850e-47
Msa0511760	Msa0609120	0.862863	3.749524e-64	-8.615850e-47
Msa0511760	Msa0619230	0.900794	5.128010e-78	-8.615850e-47
Msa0511760	Msa0621190	0.891663	3.234721e-74	-8.615850e-47
Msa0511760	Msa0643960	0.860480	2.006083e-63	-8.615850e-47
Msa0511760	Msa0649890	0.802712	4.924834e-49	-8.615850e-47
Msa0511760	Msa0656450	0.896793	2.623437e-76	-8.615850e-47
Msa0511760	Msa0686550	0.808391	3.169003e-50	-8.615850e-47
Msa0511760	Msa0691760	0.879022	1.749327e-69	-8.615850e-47
Msa0511760	Msa0694400	0.883609	3.883413e-71	-8.615850e-47
Msa0511760	Msa0700370	0.836879	7.224287e-57	-8.615850e-47
Msa0511760	Msa0704860	0.827820	1.266839e-54	-8.615850e-47
Msa0511760	Msa0708630	0.882109	1.372613e-70	-8.615850e-47
Msa0511760	Msa0748350	0.801763	7.723971e-49	-8.615850e-47
Msa0511760	Msa0758420	0.802541	5.342243e-49	-8.615850e-47
Msa0511760	Msa0790450	0.838747	2.393484e-57	-8.615850e-47
Msa0511760	Msa0834220	0.805886	1.074866e-49	-8.615850e-47
Msa0511760	Msa0880050	0.813099	3.037963e-51	-8.615850e-47
Msa0511760	Msa0881240	0.801700	7.957266e-49	-8.615850e-47
Msa0511760	Msa0929680	0.856986	2.219830e-62	-8.615850e-47
Msa0511760	Msa0929700	0.902546	8.682647e-79	-8.615850e-47
Msa0511760	Msa0930100	0.846068	2.739467e-59	-8.615850e-47
Msa0511760	Msa0930360	0.890515	9.186028e-74	-8.615850e-47
Msa0511760	Msa0930790	0.893185	7.949259e-75	-8.615850e-47
Msa0511760	Msa0930890	0.832448	9.398343e-56	-8.615850e-47
Msa0511760	Msa0982260	0.804955	1.684480e-49	-8.615850e-47
Msa0511760	Msa0987570	0.800530	1.380497e-48	-8.615850e-47
Msa0511760	Msa1041830	0.801333	9.459870e-49	-8.615850e-47
Msa0511760	Msa1068660	0.846806	1.723280e-59	-8.615850e-47
Msa0511760	Msa1082050	0.849583	2.946010e-60	-8.615850e-47
Msa0511760	Msa1085850	0.823820	1.127612e-53	-8.615850e-47
Msa0511760	Msa1124980	0.823158	1.609870e-53	-8.615850e-47
Msa0511760	Msa1126690	0.866552	2.623662e-65	-8.615850e-47
Msa0511760	Msa1144630	0.839240	1.783162e-57	-8.615850e-47
Msa0511760	Msa1156830	0.829249	5.720859e-55	-8.615850e-47
Msa0511760	Msa1165700	0.812603	3.901870e-51	-8.615850e-47
Msa0511760	Msa1167360	0.823735	1.180129e-53	-8.615850e-47
Msa0511760	Msa1180000	0.815206	1.040940e-51	-8.615850e-47
Msa0511760	Msa1206240	0.802471	5.524107e-49	-8.615850e-47
Msa0511760	Msa1227350	0.841531	4.490174e-58	-8.615850e-47
Msa0511760	Msa1235950	0.887422	1.446871e-72	-8.615850e-47
Msa0511760	Msa1235980	0.896755	2.720643e-76	-8.615850e-47
Msa0511760	Msa1237040	0.827074	1.911970e-54	-8.615850e-47
Msa0511760	Msa1245270	0.824806	6.612005e-54	-8.615850e-47
Msa0511760	Msa1284060	0.806748	7.076518e-50	-8.615850e-47
Msa0511760	Msa1284800	0.852162	5.530081e-61	-8.615850e-47
Msa0511760	Msa1296090	0.832000	1.213388e-55	-8.615850e-47
Msa0511760	Msa1307730	0.806802	6.892501e-50	-8.615850e-47
Msa0511760	Msa1316100	0.859475	4.032019e-63	-8.615850e-47
Msa0511760	Msa1317390	0.868615	5.725391e-66	-8.615850e-47
Msa0511760	Msa1333370	0.804026	2.631876e-49	-8.615850e-47
Msa0511760	Msa1351020	0.882819	7.565170e-71	-8.615850e-47
Msa0511760	Msa1351910	0.814812	1.273218e-51	-8.615850e-47
Msa0511760	Msa1358710	0.814230	1.712541e-51	-8.615850e-47
Msa0511760	Msa1363910	0.809575	1.768121e-50	-8.615850e-47
Msa0511760	Msa1363930	0.841725	3.991351e-58	-8.615850e-47
Msa0511760	Msa1366540	0.821370	4.186215e-53	-8.615850e-47
Msa0511760	Msa1385480	0.872688	2.624429e-67	-8.615850e-47
Msa0511760	Msa1387750	0.881343	2.597774e-70	-8.615850e-47
Msa0511760	Msa1390760	0.903415	3.553072e-79	-8.615850e-47
Msa0511760	Msa1403520	0.829148	6.052039e-55	-8.615850e-47
Msa0511760	Msa1407550	0.893936	3.948685e-75	-8.615850e-47
Msa0511760	Msa1413570	0.899655	1.597836e-77	-8.615850e-47
Msa0511760	Msa1423050	0.812157	4.882620e-51	-8.615850e-47
Msa0511760	Msa1424570	0.801901	7.234242e-49	-8.615850e-47
Msa0511760	Msa1432310	0.876488	1.342355e-68	-8.615850e-47
Msa0511760	Msa1446410	0.834447	2.981834e-56	-8.615850e-47
Msa0511760	Msa1446510	0.857128	2.014815e-62	-8.615850e-47
Msa0511760	Msa1450560	0.842689	2.218395e-58	-8.615850e-47
Msa0511760	Msa1463510	0.833016	6.792637e-56	-8.615850e-47
Msa0511760	Msa1463570	0.852212	5.355040e-61	-8.615850e-47
Msa0511760	Msa1465700	0.889466	2.361607e-73	-8.615850e-47
Msa0511760	Msa1465890	0.816012	6.885023e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0511760	MtrunA17_Chr3g0118291	100.000	204	0	1	204	1	204	6.78e-150	414
Msa0511760	MtrunA17_Chr2g0282541	99.510	204	1	1	204	49	252	1.89e-149	415
Msa0511760	MtrunA17_Chr7g0224171	90.323	62	6	1	62	1	62	1.93e-35	120

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0511760	AT4G16720.1	88.235	204	24	0	1	204	1	204	9.00e-122	343
Msa0511760	AT4G17390.1	87.745	204	25	0	1	204	1	204	1.88e-121	342

Find 104 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTGCATTATATCTAGATTT+TGG	0.161408	3_4:-61401986	Msa0511760:three_prime_UTR
CAAATATTTCGAGGTCATTT+TGG	0.206004	3_4:-61402264	Msa0511760:CDS
GTTTCCAAGGGTATTGTTTA+TGG	0.211521	3_4:-61402514	Msa0511760:CDS
AACAACCAAAACGAGTTTCT+AGG	0.272413	3_4:+61401921	None:intergenic
GACGGAAGCTTGGTGGTCTT+AGG	0.284899	3_4:-61402417	Msa0511760:CDS
TCCTGACAAGGCTCGCCGTT+TGG	0.286229	3_4:-61403455	Msa0511760:CDS
TTGGTGAGCCAGTTGATTCT+TGG	0.307622	3_4:+61402209	None:intergenic
TAATGTTAGCTGCTGTAAAA+TGG	0.315562	3_4:-61401632	Msa0511760:three_prime_UTR
CCTGACAAGGCTCGCCGTTT+GGG	0.317524	3_4:-61403454	Msa0511760:CDS
AGTTCCCTGTGCTTGTGGAC+TGG	0.331698	3_4:+61402185	None:intergenic
GTTCCCTGTGCTTGTGGACT+GGG	0.349720	3_4:+61402186	None:intergenic
CATTATTGCAGCAACTCATT+TGG	0.351164	3_4:-61401737	Msa0511760:three_prime_UTR
GAATAGATCAGCATCAATTA+AGG	0.355242	3_4:+61401573	None:intergenic
TTAGGGTTCTCAATTCCTAC+TGG	0.365103	3_4:-61402399	Msa0511760:CDS
TTCAAAGACAAACCGAGAAA+TGG	0.370073	3_4:-61403702	Msa0511760:exon
TGGTGAGCCAGTTGATTCTT+GGG	0.374689	3_4:+61402210	None:intergenic
TAAACAATACCCTTGGAAAC+TGG	0.377401	3_4:+61402517	None:intergenic
CTCGGTTTGTCTTTGAATGA+TGG	0.383887	3_4:+61403708	None:intergenic
GTCCATCCCGCAGGGCAAAC+TGG	0.385467	3_4:-61402091	Msa0511760:CDS
TCTCTTCCAGTTTGCCCTGC+GGG	0.386069	3_4:+61402085	None:intergenic
CATTGCCTAGAAACTCGTTT+TGG	0.398184	3_4:-61401926	Msa0511760:three_prime_UTR
TGCGGGATGGACGGGCTTTG+TGG	0.407354	3_4:+61402102	None:intergenic
TCATGCAACGTGTGAGGTGC+TGG	0.410863	3_4:-61403525	Msa0511760:CDS
ATGGATGCATACCCATTTCT+CGG	0.413861	3_4:+61403690	None:intergenic
TGCTCCTTTGAAACTTGAGT+TGG	0.414015	3_4:+61402467	None:intergenic
AACGGTAACGGCGGAGAGAC+AGG	0.416120	3_4:+61402054	None:intergenic
GTTTGCCCTGCGGGATGGAC+GGG	0.417367	3_4:+61402094	None:intergenic
TAGCTCAGAAACATACTTGT+AGG	0.420670	3_4:+61403579	None:intergenic
TGGGTAACTCCCTGGTTGGT+GGG	0.428376	3_4:+61402487	None:intergenic
CCCAAACGGCGAGCCTTGTC+AGG	0.428600	3_4:+61403454	None:intergenic
GGCTCGCCGTTTGGGTTACA+AGG	0.429123	3_4:-61403446	Msa0511760:CDS
AGTTTGCCCTGCGGGATGGA+CGG	0.430262	3_4:+61402093	None:intergenic
AATGACCTCGAAATATTTGA+AGG	0.445755	3_4:+61402268	None:intergenic
GTCTTTGAATGATGGAGATT+AGG	0.446218	3_4:+61403716	None:intergenic
CTTCGTGGTCTCACTTCTGC+TGG	0.448020	3_4:-61402164	Msa0511760:CDS
CTTGTCAGGACGAGTGGGTC+TGG	0.448800	3_4:+61403468	None:intergenic
ACGGAAGCTTGGTGGTCTTA+GGG	0.449544	3_4:-61402416	Msa0511760:CDS
GTAGCGTCACAATGGTGCTC+AGG	0.455850	3_4:-61401599	Msa0511760:three_prime_UTR
TCAAAGACAAACCGAGAAAT+GGG	0.456349	3_4:-61403701	Msa0511760:intron
TTCAGGGATATGTCGTGTAC+CGG	0.459370	3_4:-61402570	Msa0511760:intron
TTCCAGTTTGCCCTGCGGGA+TGG	0.461159	3_4:+61402089	None:intergenic
CACGAAGTTCCCTGTGCTTG+TGG	0.463265	3_4:+61402180	None:intergenic
ATGGACGGGCTTTGTGGTAA+CGG	0.472327	3_4:+61402108	None:intergenic
TTGGGTAACTCCCTGGTTGG+TGG	0.476932	3_4:+61402486	None:intergenic
GCTCCTTTGAAACTTGAGTT+GGG	0.480540	3_4:+61402468	None:intergenic
TCTGGTGAGACGAACGATAG+AGG	0.481896	3_4:+61403486	None:intergenic
TAGGCGCAGCAAACCCAGTA+AGG	0.491524	3_4:+61403735	None:intergenic
TTCTACCTTCAAATATTTCG+AGG	0.494616	3_4:-61402273	Msa0511760:CDS
CCAACCCAGTCCACAAGCAC+AGG	0.501162	3_4:-61402190	Msa0511760:CDS
CGTGCTGGACGGAAGCTTGG+TGG	0.501934	3_4:-61402424	Msa0511760:CDS
TACGCAGAGGTGGTAGGAAG+AGG	0.502186	3_4:-61402540	Msa0511760:CDS
TTTGGGTTACAAGGCTAAGC+AGG	0.502645	3_4:-61403437	Msa0511760:intron
ACAAAGCCCGTCCATCCCGC+AGG	0.505243	3_4:-61402100	Msa0511760:CDS
ACAAGTATGTTTCTGAGCTA+TGG	0.512701	3_4:-61403576	Msa0511760:CDS
GAGCGTGCTGGACGGAAGCT+TGG	0.530059	3_4:-61402427	Msa0511760:CDS
CTTACCATAAACAATACCCT+TGG	0.531543	3_4:+61402510	None:intergenic
CCTGTGCTTGTGGACTGGGT+TGG	0.541785	3_4:+61402190	None:intergenic
TAGGAAGAGGCCAGTTTCCA+AGG	0.541808	3_4:-61402527	Msa0511760:CDS
GATATGTCGTGTACCGGGTG+AGG	0.542902	3_4:-61402564	Msa0511760:CDS
GCGAGCCTTGTCAGGACGAG+TGG	0.547527	3_4:+61403462	None:intergenic
GAAATGACCCAAGAATCAAC+TGG	0.550461	3_4:-61402217	Msa0511760:CDS
TTATGGTAAGCCCACCAACC+AGG	0.550892	3_4:-61402497	Msa0511760:CDS
TGAGGGTACGCAGAGGTGGT+AGG	0.551486	3_4:-61402546	Msa0511760:CDS
ACTTGAGTTGGGTAACTCCC+TGG	0.551881	3_4:+61402479	None:intergenic
TCCGTCGCTGAAGAGCGTGC+TGG	0.554588	3_4:-61402439	Msa0511760:CDS
AACAGAGGTTTGAGTGGCAA+GGG	0.555360	3_4:-61402134	Msa0511760:CDS
TAGGGTTCTCAATTCCTACT+GGG	0.560974	3_4:-61402398	Msa0511760:CDS
CAATTCCTACTGGGTCAATG+AGG	0.563819	3_4:-61402389	Msa0511760:intron
CACCTCTGCGTACCCTCACC+CGG	0.571516	3_4:+61402551	None:intergenic
TTACCCAACTCAAGTTTCAA+AGG	0.573525	3_4:-61402471	Msa0511760:CDS
AAATAACAAATGATCAAACA+AGG	0.582529	3_4:+61401882	None:intergenic
TCAGGGATATGTCGTGTACC+GGG	0.582732	3_4:-61402569	Msa0511760:intron
TCCAGCACGCTCTTCAGCGA+CGG	0.585150	3_4:+61402438	None:intergenic
AAACAGAGGTTTGAGTGGCA+AGG	0.585660	3_4:-61402135	Msa0511760:CDS
TTCTCTTCCAGTTTGCCCTG+CGG	0.587901	3_4:+61402084	None:intergenic
TAGCGTCACAATGGTGCTCA+GGG	0.588976	3_4:-61401598	Msa0511760:three_prime_UTR
TCGCTGAAGAGCGTGCTGGA+CGG	0.595062	3_4:-61402435	Msa0511760:CDS
CATGCAACGTGTGAGGTGCT+GGG	0.596458	3_4:-61403524	Msa0511760:CDS
TCAAGTTTCAAAGGAGCAAG+AGG	0.596680	3_4:-61402462	Msa0511760:CDS
CACAAGCACAGGGAACTTCG+TGG	0.600876	3_4:-61402179	Msa0511760:CDS
CAGACCCACTCGTCCTGACA+AGG	0.605906	3_4:-61403467	Msa0511760:CDS
TATGGTAAGCCCACCAACCA+GGG	0.605988	3_4:-61402496	Msa0511760:CDS
GAGTTTCTAGGCAATGTCAC+AGG	0.607208	3_4:+61401933	None:intergenic
CGGGTGAGGGTACGCAGAGG+TGG	0.609715	3_4:-61402550	Msa0511760:CDS
TTCTAGGCAATGTCACAGGT+AGG	0.614055	3_4:+61401937	None:intergenic
TGCAGTAAAATCAACGGTAA+CGG	0.618711	3_4:+61402042	None:intergenic
CAAAGCCCGTCCATCCCGCA+GGG	0.619537	3_4:-61402099	Msa0511760:CDS
TCTAGGCAATGTCACAGGTA+GGG	0.623163	3_4:+61401938	None:intergenic
GAGTTGGGTAACTCCCTGGT+TGG	0.627619	3_4:+61402483	None:intergenic
AGGAAGAGGCCAGTTTCCAA+GGG	0.629174	3_4:-61402526	Msa0511760:CDS
GCTTAGCCTTGTAACCCAAA+CGG	0.629228	3_4:+61403440	None:intergenic
AATAACTGCAGTAAAATCAA+CGG	0.631423	3_4:+61402036	None:intergenic
CAACCCAGTCCACAAGCACA+GGG	0.632139	3_4:-61402189	Msa0511760:CDS
AAAGAAAACAGAGGTTTGAG+TGG	0.633735	3_4:-61402140	Msa0511760:CDS
ATTCTCTTGTAGCGTCACAA+TGG	0.636926	3_4:-61401607	Msa0511760:three_prime_UTR
ATATGTCGTGTACCGGGTGA+GGG	0.637020	3_4:-61402563	Msa0511760:CDS
ACGGTAACGGCGGAGAGACA+GGG	0.637745	3_4:+61402055	None:intergenic
CGAGCCTTGTCAGGACGAGT+GGG	0.641692	3_4:+61403463	None:intergenic
ACAAACCTCATTGACCCAGT+AGG	0.645250	3_4:+61402384	None:intergenic
TCTGCTGGAAAAGAAAACAG+AGG	0.661682	3_4:-61402149	Msa0511760:CDS
AATAACAAATGATCAAACAA+GGG	0.663287	3_4:+61401883	None:intergenic
AGTAAAATCAACGGTAACGG+CGG	0.665793	3_4:+61402045	None:intergenic
TACCGGGTGAGGGTACGCAG+AGG	0.698900	3_4:-61402553	Msa0511760:CDS
TGCGATTCATGCAACGTGTG+AGG	0.718067	3_4:-61403531	Msa0511760:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATAAGTCATTTTTTTAAAA+TGG	-	chr3_4:61402111-61402130	Msa0511760:CDS	10.0%
!!!	ATAAGTCATTTTTTTAAAAT+GGG	-	chr3_4:61402112-61402131	Msa0511760:CDS	10.0%
!!!	TAAGTTTTAATATTATGTTT+TGG	-	chr3_4:61403462-61403481	Msa0511760:CDS	10.0%
!!!	AATAAGTCATTTTTTTAAAA+TGG	-	chr3_4:61402111-61402130	Msa0511760:CDS	10.0%
!!!	ATAAGTCATTTTTTTAAAAT+GGG	-	chr3_4:61402112-61402131	Msa0511760:CDS	10.0%
!!!	TAAGTTTTAATATTATGTTT+TGG	-	chr3_4:61403462-61403481	Msa0511760:CDS	10.0%
!!!	TTACTAAGAATTAATCTTTT+AGG	-	chr3_4:61402005-61402024	Msa0511760:three_prime_UTR	15.0%
!!!	TACTAAGAATTAATCTTTTA+GGG	-	chr3_4:61402006-61402025	Msa0511760:three_prime_UTR	15.0%
!!	AAATTTCATATTCATATAGA+AGG	-	chr3_4:61402273-61402292	Msa0511760:CDS	15.0%
!!	ATCAAACATTAACAAAAATT+TGG	+	chr3_4:61402378-61402397	None:intergenic	15.0%
!!!	GTTTGTATTTTTATTTTTAC+TGG	-	chr3_4:61402510-61402529	Msa0511760:CDS	15.0%
!!!	TTACTAAGAATTAATCTTTT+AGG	-	chr3_4:61402005-61402024	Msa0511760:three_prime_UTR	15.0%
!!!	TACTAAGAATTAATCTTTTA+GGG	-	chr3_4:61402006-61402025	Msa0511760:three_prime_UTR	15.0%
!!	AAATTTCATATTCATATAGA+AGG	-	chr3_4:61402273-61402292	Msa0511760:CDS	15.0%
!!	ATCAAACATTAACAAAAATT+TGG	+	chr3_4:61402378-61402397	None:intergenic	15.0%
!!!	GTTTGTATTTTTATTTTTAC+TGG	-	chr3_4:61402510-61402529	Msa0511760:CDS	15.0%
!!!	TATTGTTGTTATTTGTGAAT+AGG	-	chr3_4:61401708-61401727	Msa0511760:intron	20.0%
!!!	TTTTTAAAATGGGTTTCAAA+TGG	-	chr3_4:61402122-61402141	Msa0511760:CDS	20.0%
!!!	TTATTTTTACTGGTTATTCA+TGG	-	chr3_4:61402520-61402539	Msa0511760:CDS	20.0%
!!	AATAACAAATGATCAAACAA+GGG	+	chr3_4:61403432-61403451	None:intergenic	20.0%
!!	AAATAACAAATGATCAAACA+AGG	+	chr3_4:61403433-61403452	None:intergenic	20.0%
!!!	TATTGTTGTTATTTGTGAAT+AGG	-	chr3_4:61401708-61401727	Msa0511760:intron	20.0%
!!!	TTTTTAAAATGGGTTTCAAA+TGG	-	chr3_4:61402122-61402141	Msa0511760:CDS	20.0%
!!!	TTATTTTTACTGGTTATTCA+TGG	-	chr3_4:61402520-61402539	Msa0511760:CDS	20.0%
!!	AATAACAAATGATCAAACAA+GGG	+	chr3_4:61403432-61403451	None:intergenic	20.0%
!!	AAATAACAAATGATCAAACA+AGG	+	chr3_4:61403433-61403452	None:intergenic	20.0%
!!	ACAAAAAATTGATAGTCTCT+AGG	+	chr3_4:61402342-61402361	None:intergenic	25.0%
!!!	TAGAGACTATCAATTTTTTG+TGG	-	chr3_4:61402341-61402360	Msa0511760:intron	25.0%
!!!	ACAATTGACAAATTTTAGCA+AGG	+	chr3_4:61402629-61402648	None:intergenic	25.0%
!	AATAACTGCAGTAAAATCAA+CGG	+	chr3_4:61403279-61403298	None:intergenic	25.0%
!!	AGTGCATTATATCTAGATTT+TGG	-	chr3_4:61403326-61403345	Msa0511760:intron	25.0%
!	CAAATCAAAACAAAAAAGGA+AGG	+	chr3_4:61403498-61403517	None:intergenic	25.0%
!	GTGTCAAATCAAAACAAAAA+AGG	+	chr3_4:61403502-61403521	None:intergenic	25.0%
!!	ACAAAAAATTGATAGTCTCT+AGG	+	chr3_4:61402342-61402361	None:intergenic	25.0%
!!!	TAGAGACTATCAATTTTTTG+TGG	-	chr3_4:61402341-61402360	Msa0511760:intron	25.0%
!!!	ACAATTGACAAATTTTAGCA+AGG	+	chr3_4:61402629-61402648	None:intergenic	25.0%
!	AATAACTGCAGTAAAATCAA+CGG	+	chr3_4:61403279-61403298	None:intergenic	25.0%
!!	AGTGCATTATATCTAGATTT+TGG	-	chr3_4:61403326-61403345	Msa0511760:intron	25.0%
!	CAAATCAAAACAAAAAAGGA+AGG	+	chr3_4:61403498-61403517	None:intergenic	25.0%
!	GTGTCAAATCAAAACAAAAA+AGG	+	chr3_4:61403502-61403521	None:intergenic	25.0%
	ATCATACAGAAACAAAAGCA+TGG	+	chr3_4:61401663-61401682	None:intergenic	30.0%
!!	ATTTGTTCTTGTTGATTCTC+TGG	-	chr3_4:61401934-61401953	Msa0511760:three_prime_UTR	30.0%
	TATTCTACTAGTTAACACCT+GGG	-	chr3_4:61402179-61402198	Msa0511760:CDS	30.0%
!!	GCAAATCACAAATTTTAGCA+AGG	+	chr3_4:61402564-61402583	None:intergenic	30.0%
	CATGTTTACAAAATGAAGCA+AGG	+	chr3_4:61402695-61402714	None:intergenic	30.0%
	TGTAATTGTCACATCATTTC+AGG	-	chr3_4:61402725-61402744	Msa0511760:intron	30.0%
	GTAATTGTCACATCATTTCA+GGG	-	chr3_4:61402726-61402745	Msa0511760:intron	30.0%
	GAACTAGTTGAAGTTCAATT+TGG	-	chr3_4:61402961-61402980	Msa0511760:intron	30.0%
	TAGCACAAAACAAAACAATG+GGG	+	chr3_4:61403014-61403033	None:intergenic	30.0%
	GTAGCACAAAACAAAACAAT+GGG	+	chr3_4:61403015-61403034	None:intergenic	30.0%
	TGTAGCACAAAACAAAACAA+TGG	+	chr3_4:61403016-61403035	None:intergenic	30.0%
!!!	ATTGTTTTGTTTTGTGCTAC+AGG	-	chr3_4:61403015-61403034	Msa0511760:intron	30.0%
	TTCTACCTTCAAATATTTCG+AGG	-	chr3_4:61403039-61403058	Msa0511760:intron	30.0%
	AATGACCTCGAAATATTTGA+AGG	+	chr3_4:61403047-61403066	None:intergenic	30.0%
!	CAAATATTTCGAGGTCATTT+TGG	-	chr3_4:61403048-61403067	Msa0511760:intron	30.0%
!!!	TTTTGTGTTGCTTCATTTTC+TGG	-	chr3_4:61403297-61403316	Msa0511760:intron	30.0%
	ATCAAAACAAAAAAGGAAGG+CGG	+	chr3_4:61403495-61403514	None:intergenic	30.0%
!	TCCGTATTACTGCAAATTTT+TGG	-	chr3_4:61403527-61403546	Msa0511760:CDS	30.0%
	CCCAAAAATTTGCAGTAATA+CGG	+	chr3_4:61403531-61403550	None:intergenic	30.0%
!	CCGTATTACTGCAAATTTTT+GGG	-	chr3_4:61403528-61403547	Msa0511760:CDS	30.0%
	TAATGTTAGCTGCTGTAAAA+TGG	-	chr3_4:61403680-61403699	Msa0511760:intron	30.0%
	ATCATACAGAAACAAAAGCA+TGG	+	chr3_4:61401663-61401682	None:intergenic	30.0%
!!	ATTTGTTCTTGTTGATTCTC+TGG	-	chr3_4:61401934-61401953	Msa0511760:three_prime_UTR	30.0%
	TATTCTACTAGTTAACACCT+GGG	-	chr3_4:61402179-61402198	Msa0511760:CDS	30.0%
!!	GCAAATCACAAATTTTAGCA+AGG	+	chr3_4:61402564-61402583	None:intergenic	30.0%
	CATGTTTACAAAATGAAGCA+AGG	+	chr3_4:61402695-61402714	None:intergenic	30.0%
	TGTAATTGTCACATCATTTC+AGG	-	chr3_4:61402725-61402744	Msa0511760:intron	30.0%
	GTAATTGTCACATCATTTCA+GGG	-	chr3_4:61402726-61402745	Msa0511760:intron	30.0%
	GAACTAGTTGAAGTTCAATT+TGG	-	chr3_4:61402961-61402980	Msa0511760:intron	30.0%
	TAGCACAAAACAAAACAATG+GGG	+	chr3_4:61403014-61403033	None:intergenic	30.0%
	GTAGCACAAAACAAAACAAT+GGG	+	chr3_4:61403015-61403034	None:intergenic	30.0%
	TGTAGCACAAAACAAAACAA+TGG	+	chr3_4:61403016-61403035	None:intergenic	30.0%
!!!	ATTGTTTTGTTTTGTGCTAC+AGG	-	chr3_4:61403015-61403034	Msa0511760:intron	30.0%
	TTCTACCTTCAAATATTTCG+AGG	-	chr3_4:61403039-61403058	Msa0511760:intron	30.0%
	AATGACCTCGAAATATTTGA+AGG	+	chr3_4:61403047-61403066	None:intergenic	30.0%
!	CAAATATTTCGAGGTCATTT+TGG	-	chr3_4:61403048-61403067	Msa0511760:intron	30.0%
!!!	TTTTGTGTTGCTTCATTTTC+TGG	-	chr3_4:61403297-61403316	Msa0511760:intron	30.0%
	ATCAAAACAAAAAAGGAAGG+CGG	+	chr3_4:61403495-61403514	None:intergenic	30.0%
!	TCCGTATTACTGCAAATTTT+TGG	-	chr3_4:61403527-61403546	Msa0511760:CDS	30.0%
	CCCAAAAATTTGCAGTAATA+CGG	+	chr3_4:61403531-61403550	None:intergenic	30.0%
!	CCGTATTACTGCAAATTTTT+GGG	-	chr3_4:61403528-61403547	Msa0511760:CDS	30.0%
	TAATGTTAGCTGCTGTAAAA+TGG	-	chr3_4:61403680-61403699	Msa0511760:intron	30.0%
!	GTCTTTGAATGATGGAGATT+AGG	+	chr3_4:61401599-61401618	None:intergenic	35.0%
	TTCAAAGACAAACCGAGAAA+TGG	-	chr3_4:61401610-61401629	Msa0511760:three_prime_UTR	35.0%
	TCAAAGACAAACCGAGAAAT+GGG	-	chr3_4:61401611-61401630	Msa0511760:three_prime_UTR	35.0%
	ATGGAGAATTGAAGAGTAGA+TGG	+	chr3_4:61401644-61401663	None:intergenic	35.0%
	TAGCTCAGAAACATACTTGT+AGG	+	chr3_4:61401736-61401755	None:intergenic	35.0%
!	ACAAGTATGTTTCTGAGCTA+TGG	-	chr3_4:61401736-61401755	Msa0511760:three_prime_UTR	35.0%
	CAGGTGTTAACTAGTAGAAT+AGG	+	chr3_4:61402180-61402199	None:intergenic	35.0%
	CTATTCTACTAGTTAACACC+TGG	-	chr3_4:61402178-61402197	Msa0511760:CDS	35.0%
	CACAATGTGTTATGTCTTGT+TGG	-	chr3_4:61402463-61402482	Msa0511760:CDS	35.0%
	TAAACAATACCCTTGGAAAC+TGG	+	chr3_4:61402798-61402817	None:intergenic	35.0%
!!	GTTTCCAAGGGTATTGTTTA+TGG	-	chr3_4:61402798-61402817	Msa0511760:intron	35.0%
	CTTACCATAAACAATACCCT+TGG	+	chr3_4:61402805-61402824	None:intergenic	35.0%
	TTACCCAACTCAAGTTTCAA+AGG	-	chr3_4:61402841-61402860	Msa0511760:intron	35.0%
	ACAAAACAAAACAATGGGGT+TGG	+	chr3_4:61403010-61403029	None:intergenic	35.0%
	AAAGAAAACAGAGGTTTGAG+TGG	-	chr3_4:61403172-61403191	Msa0511760:intron	35.0%
	TGCAGTAAAATCAACGGTAA+CGG	+	chr3_4:61403273-61403292	None:intergenic	35.0%
	AACAACCAAAACGAGTTTCT+AGG	+	chr3_4:61403394-61403413	None:intergenic	35.0%
!!!	AATTTTTGGGTCTTCAAGCA+AGG	-	chr3_4:61403541-61403560	Msa0511760:CDS	35.0%
	CATTATTGCAGCAACTCATT+TGG	-	chr3_4:61403575-61403594	Msa0511760:CDS	35.0%
!	GTCTTTGAATGATGGAGATT+AGG	+	chr3_4:61401599-61401618	None:intergenic	35.0%
	TTCAAAGACAAACCGAGAAA+TGG	-	chr3_4:61401610-61401629	Msa0511760:three_prime_UTR	35.0%
	TCAAAGACAAACCGAGAAAT+GGG	-	chr3_4:61401611-61401630	Msa0511760:three_prime_UTR	35.0%
	ATGGAGAATTGAAGAGTAGA+TGG	+	chr3_4:61401644-61401663	None:intergenic	35.0%
	TAGCTCAGAAACATACTTGT+AGG	+	chr3_4:61401736-61401755	None:intergenic	35.0%
!	ACAAGTATGTTTCTGAGCTA+TGG	-	chr3_4:61401736-61401755	Msa0511760:three_prime_UTR	35.0%
	CAGGTGTTAACTAGTAGAAT+AGG	+	chr3_4:61402180-61402199	None:intergenic	35.0%
	CTATTCTACTAGTTAACACC+TGG	-	chr3_4:61402178-61402197	Msa0511760:CDS	35.0%
	CACAATGTGTTATGTCTTGT+TGG	-	chr3_4:61402463-61402482	Msa0511760:CDS	35.0%
	TAAACAATACCCTTGGAAAC+TGG	+	chr3_4:61402798-61402817	None:intergenic	35.0%
!!	GTTTCCAAGGGTATTGTTTA+TGG	-	chr3_4:61402798-61402817	Msa0511760:intron	35.0%
	CTTACCATAAACAATACCCT+TGG	+	chr3_4:61402805-61402824	None:intergenic	35.0%
	TTACCCAACTCAAGTTTCAA+AGG	-	chr3_4:61402841-61402860	Msa0511760:intron	35.0%
	ACAAAACAAAACAATGGGGT+TGG	+	chr3_4:61403010-61403029	None:intergenic	35.0%
	AAAGAAAACAGAGGTTTGAG+TGG	-	chr3_4:61403172-61403191	Msa0511760:intron	35.0%
	TGCAGTAAAATCAACGGTAA+CGG	+	chr3_4:61403273-61403292	None:intergenic	35.0%
	AACAACCAAAACGAGTTTCT+AGG	+	chr3_4:61403394-61403413	None:intergenic	35.0%
!!!	AATTTTTGGGTCTTCAAGCA+AGG	-	chr3_4:61403541-61403560	Msa0511760:CDS	35.0%
	CATTATTGCAGCAACTCATT+TGG	-	chr3_4:61403575-61403594	Msa0511760:CDS	35.0%
!	CTCGGTTTGTCTTTGAATGA+TGG	+	chr3_4:61401607-61401626	None:intergenic	40.0%
	ATGGATGCATACCCATTTCT+CGG	+	chr3_4:61401625-61401644	None:intergenic	40.0%
!!	GCTCCTTTGAAACTTGAGTT+GGG	+	chr3_4:61402847-61402866	None:intergenic	40.0%
!!	TGCTCCTTTGAAACTTGAGT+TGG	+	chr3_4:61402848-61402867	None:intergenic	40.0%
	TCAAGTTTCAAAGGAGCAAG+AGG	-	chr3_4:61402850-61402869	Msa0511760:intron	40.0%
	TTAGGGTTCTCAATTCCTAC+TGG	-	chr3_4:61402913-61402932	Msa0511760:intron	40.0%
	TAGGGTTCTCAATTCCTACT+GGG	-	chr3_4:61402914-61402933	Msa0511760:intron	40.0%
	TCAATTTGGTTGTGATGTGC+TGG	-	chr3_4:61402975-61402994	Msa0511760:intron	40.0%
	GAAATGACCCAAGAATCAAC+TGG	-	chr3_4:61403095-61403114	Msa0511760:intron	40.0%
	TCTGCTGGAAAAGAAAACAG+AGG	-	chr3_4:61403163-61403182	Msa0511760:intron	40.0%
!	AGTAAAATCAACGGTAACGG+CGG	+	chr3_4:61403270-61403289	None:intergenic	40.0%
!	CATTGCCTAGAAACTCGTTT+TGG	-	chr3_4:61403386-61403405	Msa0511760:intron	40.0%
	ATTCTCTTGTAGCGTCACAA+TGG	-	chr3_4:61403705-61403724	Msa0511760:exon	40.0%
!	CTCGGTTTGTCTTTGAATGA+TGG	+	chr3_4:61401607-61401626	None:intergenic	40.0%
	ATGGATGCATACCCATTTCT+CGG	+	chr3_4:61401625-61401644	None:intergenic	40.0%
!!	GCTCCTTTGAAACTTGAGTT+GGG	+	chr3_4:61402847-61402866	None:intergenic	40.0%
!!	TGCTCCTTTGAAACTTGAGT+TGG	+	chr3_4:61402848-61402867	None:intergenic	40.0%
	TCAAGTTTCAAAGGAGCAAG+AGG	-	chr3_4:61402850-61402869	Msa0511760:intron	40.0%
	TTAGGGTTCTCAATTCCTAC+TGG	-	chr3_4:61402913-61402932	Msa0511760:intron	40.0%
	TAGGGTTCTCAATTCCTACT+GGG	-	chr3_4:61402914-61402933	Msa0511760:intron	40.0%
	TCAATTTGGTTGTGATGTGC+TGG	-	chr3_4:61402975-61402994	Msa0511760:intron	40.0%
	GAAATGACCCAAGAATCAAC+TGG	-	chr3_4:61403095-61403114	Msa0511760:intron	40.0%
	TCTGCTGGAAAAGAAAACAG+AGG	-	chr3_4:61403163-61403182	Msa0511760:intron	40.0%
!	AGTAAAATCAACGGTAACGG+CGG	+	chr3_4:61403270-61403289	None:intergenic	40.0%
!	CATTGCCTAGAAACTCGTTT+TGG	-	chr3_4:61403386-61403405	Msa0511760:intron	40.0%
	ATTCTCTTGTAGCGTCACAA+TGG	-	chr3_4:61403705-61403724	Msa0511760:exon	40.0%
!!	GCTTAGCCTTGTAACCCAAA+CGG	+	chr3_4:61401875-61401894	None:intergenic	45.0%
!	TTTGGGTTACAAGGCTAAGC+AGG	-	chr3_4:61401875-61401894	Msa0511760:three_prime_UTR	45.0%
	TCTACTAGTTAACACCTGGG+TGG	-	chr3_4:61402182-61402201	Msa0511760:CDS	45.0%
	CTACTAGTTAACACCTGGGT+GGG	-	chr3_4:61402183-61402202	Msa0511760:CDS	45.0%
	TACTAGTTAACACCTGGGTG+GGG	-	chr3_4:61402184-61402203	Msa0511760:CDS	45.0%
	GGGGCAGGAGTTACAATAAT+TGG	-	chr3_4:61402203-61402222	Msa0511760:CDS	45.0%
	GGTCTTGAGCAATGGTTCAA+AGG	+	chr3_4:61402310-61402329	None:intergenic	45.0%
!	CTGTACATGGTCTTGAGCAA+TGG	+	chr3_4:61402318-61402337	None:intergenic	45.0%
	CATTGCTCAAGACCATGTAC+AGG	-	chr3_4:61402316-61402335	Msa0511760:intron	45.0%
	ATAGTCTCTAGGCCTGTACA+TGG	+	chr3_4:61402331-61402350	None:intergenic	45.0%
!	CCACAAACAGCAGATTAGTC+TGG	+	chr3_4:61402402-61402421	None:intergenic	45.0%
!	CCAGACTAATCTGCTGTTTG+TGG	-	chr3_4:61402399-61402418	Msa0511760:CDS	45.0%
	TTCAGGGATATGTCGTGTAC+CGG	-	chr3_4:61402742-61402761	Msa0511760:intron	45.0%
	CAATTCCTACTGGGTCAATG+AGG	-	chr3_4:61402923-61402942	Msa0511760:intron	45.0%
	ACAAACCTCATTGACCCAGT+AGG	+	chr3_4:61402931-61402950	None:intergenic	45.0%
!	TGGTGAGCCAGTTGATTCTT+GGG	+	chr3_4:61403105-61403124	None:intergenic	45.0%
!	TTGGTGAGCCAGTTGATTCT+TGG	+	chr3_4:61403106-61403125	None:intergenic	45.0%
	AAACAGAGGTTTGAGTGGCA+AGG	-	chr3_4:61403177-61403196	Msa0511760:intron	45.0%
	AACAGAGGTTTGAGTGGCAA+GGG	-	chr3_4:61403178-61403197	Msa0511760:intron	45.0%
	TCTAGGCAATGTCACAGGTA+GGG	+	chr3_4:61403377-61403396	None:intergenic	45.0%
	TTCTAGGCAATGTCACAGGT+AGG	+	chr3_4:61403378-61403397	None:intergenic	45.0%
!	GAGTTTCTAGGCAATGTCAC+AGG	+	chr3_4:61403382-61403401	None:intergenic	45.0%
!!	GCTTAGCCTTGTAACCCAAA+CGG	+	chr3_4:61401875-61401894	None:intergenic	45.0%
!	TTTGGGTTACAAGGCTAAGC+AGG	-	chr3_4:61401875-61401894	Msa0511760:three_prime_UTR	45.0%
	TCTACTAGTTAACACCTGGG+TGG	-	chr3_4:61402182-61402201	Msa0511760:CDS	45.0%
	CTACTAGTTAACACCTGGGT+GGG	-	chr3_4:61402183-61402202	Msa0511760:CDS	45.0%
	TACTAGTTAACACCTGGGTG+GGG	-	chr3_4:61402184-61402203	Msa0511760:CDS	45.0%
	GGGGCAGGAGTTACAATAAT+TGG	-	chr3_4:61402203-61402222	Msa0511760:CDS	45.0%
	GGTCTTGAGCAATGGTTCAA+AGG	+	chr3_4:61402310-61402329	None:intergenic	45.0%
!	CTGTACATGGTCTTGAGCAA+TGG	+	chr3_4:61402318-61402337	None:intergenic	45.0%
	CATTGCTCAAGACCATGTAC+AGG	-	chr3_4:61402316-61402335	Msa0511760:intron	45.0%
	ATAGTCTCTAGGCCTGTACA+TGG	+	chr3_4:61402331-61402350	None:intergenic	45.0%
!	CCACAAACAGCAGATTAGTC+TGG	+	chr3_4:61402402-61402421	None:intergenic	45.0%
!	CCAGACTAATCTGCTGTTTG+TGG	-	chr3_4:61402399-61402418	Msa0511760:CDS	45.0%
	TTCAGGGATATGTCGTGTAC+CGG	-	chr3_4:61402742-61402761	Msa0511760:intron	45.0%
	CAATTCCTACTGGGTCAATG+AGG	-	chr3_4:61402923-61402942	Msa0511760:intron	45.0%
	ACAAACCTCATTGACCCAGT+AGG	+	chr3_4:61402931-61402950	None:intergenic	45.0%
!	TGGTGAGCCAGTTGATTCTT+GGG	+	chr3_4:61403105-61403124	None:intergenic	45.0%
!	TTGGTGAGCCAGTTGATTCT+TGG	+	chr3_4:61403106-61403125	None:intergenic	45.0%
	AAACAGAGGTTTGAGTGGCA+AGG	-	chr3_4:61403177-61403196	Msa0511760:intron	45.0%
	AACAGAGGTTTGAGTGGCAA+GGG	-	chr3_4:61403178-61403197	Msa0511760:intron	45.0%
	TCTAGGCAATGTCACAGGTA+GGG	+	chr3_4:61403377-61403396	None:intergenic	45.0%
	TTCTAGGCAATGTCACAGGT+AGG	+	chr3_4:61403378-61403397	None:intergenic	45.0%
!	GAGTTTCTAGGCAATGTCAC+AGG	+	chr3_4:61403382-61403401	None:intergenic	45.0%
	TGCGATTCATGCAACGTGTG+AGG	-	chr3_4:61401781-61401800	Msa0511760:three_prime_UTR	50.0%
	TCTGGTGAGACGAACGATAG+AGG	+	chr3_4:61401829-61401848	None:intergenic	50.0%
	TCAGGGATATGTCGTGTACC+GGG	-	chr3_4:61402743-61402762	Msa0511760:intron	50.0%
	ATATGTCGTGTACCGGGTGA+GGG	-	chr3_4:61402749-61402768	Msa0511760:intron	50.0%
	TAGGAAGAGGCCAGTTTCCA+AGG	-	chr3_4:61402785-61402804	Msa0511760:intron	50.0%
	AGGAAGAGGCCAGTTTCCAA+GGG	-	chr3_4:61402786-61402805	Msa0511760:intron	50.0%
	TTATGGTAAGCCCACCAACC+AGG	-	chr3_4:61402815-61402834	Msa0511760:intron	50.0%
	TATGGTAAGCCCACCAACCA+GGG	-	chr3_4:61402816-61402835	Msa0511760:intron	50.0%
!!	ACTTGAGTTGGGTAACTCCC+TGG	+	chr3_4:61402836-61402855	None:intergenic	50.0%
!	ACGGAAGCTTGGTGGTCTTA+GGG	-	chr3_4:61402896-61402915	Msa0511760:intron	50.0%
!	TTTGGTTGTGATGTGCTGGC+TGG	-	chr3_4:61402979-61402998	Msa0511760:intron	50.0%
!	ATGGACGGGCTTTGTGGTAA+CGG	+	chr3_4:61403207-61403226	None:intergenic	50.0%
	TTCTCTTCCAGTTTGCCCTG+CGG	+	chr3_4:61403231-61403250	None:intergenic	50.0%
	TAGCGTCACAATGGTGCTCA+GGG	-	chr3_4:61403714-61403733	Msa0511760:five_prime_UTR	50.0%
	TGCGATTCATGCAACGTGTG+AGG	-	chr3_4:61401781-61401800	Msa0511760:three_prime_UTR	50.0%
	TCTGGTGAGACGAACGATAG+AGG	+	chr3_4:61401829-61401848	None:intergenic	50.0%
	TCAGGGATATGTCGTGTACC+GGG	-	chr3_4:61402743-61402762	Msa0511760:intron	50.0%
	ATATGTCGTGTACCGGGTGA+GGG	-	chr3_4:61402749-61402768	Msa0511760:intron	50.0%
	TAGGAAGAGGCCAGTTTCCA+AGG	-	chr3_4:61402785-61402804	Msa0511760:intron	50.0%
	AGGAAGAGGCCAGTTTCCAA+GGG	-	chr3_4:61402786-61402805	Msa0511760:intron	50.0%
	TTATGGTAAGCCCACCAACC+AGG	-	chr3_4:61402815-61402834	Msa0511760:intron	50.0%
	TATGGTAAGCCCACCAACCA+GGG	-	chr3_4:61402816-61402835	Msa0511760:intron	50.0%
!!	ACTTGAGTTGGGTAACTCCC+TGG	+	chr3_4:61402836-61402855	None:intergenic	50.0%
!	ACGGAAGCTTGGTGGTCTTA+GGG	-	chr3_4:61402896-61402915	Msa0511760:intron	50.0%
!	TTTGGTTGTGATGTGCTGGC+TGG	-	chr3_4:61402979-61402998	Msa0511760:intron	50.0%
!	ATGGACGGGCTTTGTGGTAA+CGG	+	chr3_4:61403207-61403226	None:intergenic	50.0%
	TTCTCTTCCAGTTTGCCCTG+CGG	+	chr3_4:61403231-61403250	None:intergenic	50.0%
	TAGCGTCACAATGGTGCTCA+GGG	-	chr3_4:61403714-61403733	Msa0511760:five_prime_UTR	50.0%
	TCATGCAACGTGTGAGGTGC+TGG	-	chr3_4:61401787-61401806	Msa0511760:three_prime_UTR	55.0%
!	CATGCAACGTGTGAGGTGCT+GGG	-	chr3_4:61401788-61401807	Msa0511760:three_prime_UTR	55.0%
	GATATGTCGTGTACCGGGTG+AGG	-	chr3_4:61402748-61402767	Msa0511760:intron	55.0%
	TACGCAGAGGTGGTAGGAAG+AGG	-	chr3_4:61402772-61402791	Msa0511760:intron	55.0%
	TGGGTAACTCCCTGGTTGGT+GGG	+	chr3_4:61402828-61402847	None:intergenic	55.0%
	TTGGGTAACTCCCTGGTTGG+TGG	+	chr3_4:61402829-61402848	None:intergenic	55.0%
	GAGTTGGGTAACTCCCTGGT+TGG	+	chr3_4:61402832-61402851	None:intergenic	55.0%
!	GACGGAAGCTTGGTGGTCTT+AGG	-	chr3_4:61402895-61402914	Msa0511760:intron	55.0%
	CAACCCAGTCCACAAGCACA+GGG	-	chr3_4:61403123-61403142	Msa0511760:intron	55.0%
	GTTCCCTGTGCTTGTGGACT+GGG	+	chr3_4:61403129-61403148	None:intergenic	55.0%
	AGTTCCCTGTGCTTGTGGAC+TGG	+	chr3_4:61403130-61403149	None:intergenic	55.0%
	CACGAAGTTCCCTGTGCTTG+TGG	+	chr3_4:61403135-61403154	None:intergenic	55.0%
	CACAAGCACAGGGAACTTCG+TGG	-	chr3_4:61403133-61403152	Msa0511760:intron	55.0%
	CTTCGTGGTCTCACTTCTGC+TGG	-	chr3_4:61403148-61403167	Msa0511760:intron	55.0%
	TCTCTTCCAGTTTGCCCTGC+GGG	+	chr3_4:61403230-61403249	None:intergenic	55.0%
	GTAGCGTCACAATGGTGCTC+AGG	-	chr3_4:61403713-61403732	Msa0511760:five_prime_UTR	55.0%
	TCATGCAACGTGTGAGGTGC+TGG	-	chr3_4:61401787-61401806	Msa0511760:three_prime_UTR	55.0%
!	CATGCAACGTGTGAGGTGCT+GGG	-	chr3_4:61401788-61401807	Msa0511760:three_prime_UTR	55.0%
	GATATGTCGTGTACCGGGTG+AGG	-	chr3_4:61402748-61402767	Msa0511760:intron	55.0%
	TACGCAGAGGTGGTAGGAAG+AGG	-	chr3_4:61402772-61402791	Msa0511760:intron	55.0%
	TGGGTAACTCCCTGGTTGGT+GGG	+	chr3_4:61402828-61402847	None:intergenic	55.0%
	TTGGGTAACTCCCTGGTTGG+TGG	+	chr3_4:61402829-61402848	None:intergenic	55.0%
	GAGTTGGGTAACTCCCTGGT+TGG	+	chr3_4:61402832-61402851	None:intergenic	55.0%
!	GACGGAAGCTTGGTGGTCTT+AGG	-	chr3_4:61402895-61402914	Msa0511760:intron	55.0%
	CAACCCAGTCCACAAGCACA+GGG	-	chr3_4:61403123-61403142	Msa0511760:intron	55.0%
	GTTCCCTGTGCTTGTGGACT+GGG	+	chr3_4:61403129-61403148	None:intergenic	55.0%
	AGTTCCCTGTGCTTGTGGAC+TGG	+	chr3_4:61403130-61403149	None:intergenic	55.0%
	CACGAAGTTCCCTGTGCTTG+TGG	+	chr3_4:61403135-61403154	None:intergenic	55.0%
	CACAAGCACAGGGAACTTCG+TGG	-	chr3_4:61403133-61403152	Msa0511760:intron	55.0%
	CTTCGTGGTCTCACTTCTGC+TGG	-	chr3_4:61403148-61403167	Msa0511760:intron	55.0%
	TCTCTTCCAGTTTGCCCTGC+GGG	+	chr3_4:61403230-61403249	None:intergenic	55.0%
	GTAGCGTCACAATGGTGCTC+AGG	-	chr3_4:61403713-61403732	Msa0511760:five_prime_UTR	55.0%
	CTTGTCAGGACGAGTGGGTC+TGG	+	chr3_4:61401847-61401866	None:intergenic	60.0%
	CAGACCCACTCGTCCTGACA+AGG	-	chr3_4:61401845-61401864	Msa0511760:three_prime_UTR	60.0%
!	CGAGCCTTGTCAGGACGAGT+GGG	+	chr3_4:61401852-61401871	None:intergenic	60.0%
	TCCTGACAAGGCTCGCCGTT+TGG	-	chr3_4:61401857-61401876	Msa0511760:three_prime_UTR	60.0%
	CCTGACAAGGCTCGCCGTTT+GGG	-	chr3_4:61401858-61401877	Msa0511760:three_prime_UTR	60.0%
!	GGCTCGCCGTTTGGGTTACA+AGG	-	chr3_4:61401866-61401885	Msa0511760:three_prime_UTR	60.0%
	AGTTAACACCTGGGTGGGGC+AGG	-	chr3_4:61402188-61402207	Msa0511760:CDS	60.0%
	TTGTAACTCCTGCCCCACCC+AGG	+	chr3_4:61402199-61402218	None:intergenic	60.0%
!	TGAGGGTACGCAGAGGTGGT+AGG	-	chr3_4:61402766-61402785	Msa0511760:intron	60.0%
	TCCAGCACGCTCTTCAGCGA+CGG	+	chr3_4:61402877-61402896	None:intergenic	60.0%
!	TCGCTGAAGAGCGTGCTGGA+CGG	-	chr3_4:61402877-61402896	Msa0511760:intron	60.0%
!!	CCTGTGCTTGTGGACTGGGT+TGG	+	chr3_4:61403125-61403144	None:intergenic	60.0%
	CCAACCCAGTCCACAAGCAC+AGG	-	chr3_4:61403122-61403141	Msa0511760:intron	60.0%
	AGTTTGCCCTGCGGGATGGA+CGG	+	chr3_4:61403222-61403241	None:intergenic	60.0%
	TTCCAGTTTGCCCTGCGGGA+TGG	+	chr3_4:61403226-61403245	None:intergenic	60.0%
!	ACGGTAACGGCGGAGAGACA+GGG	+	chr3_4:61403260-61403279	None:intergenic	60.0%
!	AACGGTAACGGCGGAGAGAC+AGG	+	chr3_4:61403261-61403280	None:intergenic	60.0%
	CTTGTCAGGACGAGTGGGTC+TGG	+	chr3_4:61401847-61401866	None:intergenic	60.0%
	CAGACCCACTCGTCCTGACA+AGG	-	chr3_4:61401845-61401864	Msa0511760:three_prime_UTR	60.0%
!	CGAGCCTTGTCAGGACGAGT+GGG	+	chr3_4:61401852-61401871	None:intergenic	60.0%
	TCCTGACAAGGCTCGCCGTT+TGG	-	chr3_4:61401857-61401876	Msa0511760:three_prime_UTR	60.0%
	CCTGACAAGGCTCGCCGTTT+GGG	-	chr3_4:61401858-61401877	Msa0511760:three_prime_UTR	60.0%
!	GGCTCGCCGTTTGGGTTACA+AGG	-	chr3_4:61401866-61401885	Msa0511760:three_prime_UTR	60.0%
	AGTTAACACCTGGGTGGGGC+AGG	-	chr3_4:61402188-61402207	Msa0511760:CDS	60.0%
	TTGTAACTCCTGCCCCACCC+AGG	+	chr3_4:61402199-61402218	None:intergenic	60.0%
!	TGAGGGTACGCAGAGGTGGT+AGG	-	chr3_4:61402766-61402785	Msa0511760:intron	60.0%
	TCCAGCACGCTCTTCAGCGA+CGG	+	chr3_4:61402877-61402896	None:intergenic	60.0%
!	TCGCTGAAGAGCGTGCTGGA+CGG	-	chr3_4:61402877-61402896	Msa0511760:intron	60.0%
!!	CCTGTGCTTGTGGACTGGGT+TGG	+	chr3_4:61403125-61403144	None:intergenic	60.0%
	CCAACCCAGTCCACAAGCAC+AGG	-	chr3_4:61403122-61403141	Msa0511760:intron	60.0%
	AGTTTGCCCTGCGGGATGGA+CGG	+	chr3_4:61403222-61403241	None:intergenic	60.0%
	TTCCAGTTTGCCCTGCGGGA+TGG	+	chr3_4:61403226-61403245	None:intergenic	60.0%
!	ACGGTAACGGCGGAGAGACA+GGG	+	chr3_4:61403260-61403279	None:intergenic	60.0%
!	AACGGTAACGGCGGAGAGAC+AGG	+	chr3_4:61403261-61403280	None:intergenic	60.0%
!	GCGAGCCTTGTCAGGACGAG+TGG	+	chr3_4:61401853-61401872	None:intergenic	65.0%
!	CCCAAACGGCGAGCCTTGTC+AGG	+	chr3_4:61401861-61401880	None:intergenic	65.0%
!	TACCGGGTGAGGGTACGCAG+AGG	-	chr3_4:61402759-61402778	Msa0511760:intron	65.0%
	CACCTCTGCGTACCCTCACC+CGG	+	chr3_4:61402764-61402783	None:intergenic	65.0%
!	TCCGTCGCTGAAGAGCGTGC+TGG	-	chr3_4:61402873-61402892	Msa0511760:intron	65.0%
	GAGCGTGCTGGACGGAAGCT+TGG	-	chr3_4:61402885-61402904	Msa0511760:intron	65.0%
	CGTGCTGGACGGAAGCTTGG+TGG	-	chr3_4:61402888-61402907	Msa0511760:intron	65.0%
!	TGCGGGATGGACGGGCTTTG+TGG	+	chr3_4:61403213-61403232	None:intergenic	65.0%
	ACAAAGCCCGTCCATCCCGC+AGG	-	chr3_4:61403212-61403231	Msa0511760:intron	65.0%
	CAAAGCCCGTCCATCCCGCA+GGG	-	chr3_4:61403213-61403232	Msa0511760:intron	65.0%
	GTTTGCCCTGCGGGATGGAC+GGG	+	chr3_4:61403221-61403240	None:intergenic	65.0%
	GTCCATCCCGCAGGGCAAAC+TGG	-	chr3_4:61403221-61403240	Msa0511760:intron	65.0%
!	GCGAGCCTTGTCAGGACGAG+TGG	+	chr3_4:61401853-61401872	None:intergenic	65.0%
!	CCCAAACGGCGAGCCTTGTC+AGG	+	chr3_4:61401861-61401880	None:intergenic	65.0%
!	TACCGGGTGAGGGTACGCAG+AGG	-	chr3_4:61402759-61402778	Msa0511760:intron	65.0%
	CACCTCTGCGTACCCTCACC+CGG	+	chr3_4:61402764-61402783	None:intergenic	65.0%
!	TCCGTCGCTGAAGAGCGTGC+TGG	-	chr3_4:61402873-61402892	Msa0511760:intron	65.0%
	GAGCGTGCTGGACGGAAGCT+TGG	-	chr3_4:61402885-61402904	Msa0511760:intron	65.0%
	CGTGCTGGACGGAAGCTTGG+TGG	-	chr3_4:61402888-61402907	Msa0511760:intron	65.0%
!	TGCGGGATGGACGGGCTTTG+TGG	+	chr3_4:61403213-61403232	None:intergenic	65.0%
	ACAAAGCCCGTCCATCCCGC+AGG	-	chr3_4:61403212-61403231	Msa0511760:intron	65.0%
	CAAAGCCCGTCCATCCCGCA+GGG	-	chr3_4:61403213-61403232	Msa0511760:intron	65.0%
	GTTTGCCCTGCGGGATGGAC+GGG	+	chr3_4:61403221-61403240	None:intergenic	65.0%
	GTCCATCCCGCAGGGCAAAC+TGG	-	chr3_4:61403221-61403240	Msa0511760:intron	65.0%
!	CGGGTGAGGGTACGCAGAGG+TGG	-	chr3_4:61402762-61402781	Msa0511760:intron	70.0%
!	CGGGTGAGGGTACGCAGAGG+TGG	-	chr3_4:61402762-61402781	Msa0511760:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	61401580	61403754	61401580	ID=Msa0511760;Name=Msa0511760
chr3_4	mRNA	61401580	61403754	61401580	ID=Msa0511760-mRNA-1;Parent=Msa0511760;Name=Msa0511760-mRNA-1;_AED=0.01;_eAED=0.01;_QI=49\|1\|1\|1\|0.75\|0.6\|5\|417\|204
chr3_4	exon	61401580	61401671	61401580	ID=Msa0511760-mRNA-1:exon:15008;Parent=Msa0511760-mRNA-1
chr3_4	exon	61401727	61402297	61401727	ID=Msa0511760-mRNA-1:exon:15007;Parent=Msa0511760-mRNA-1
chr3_4	exon	61402390	61402587	61402390	ID=Msa0511760-mRNA-1:exon:15006;Parent=Msa0511760-mRNA-1
chr3_4	exon	61403438	61403604	61403438	ID=Msa0511760-mRNA-1:exon:15005;Parent=Msa0511760-mRNA-1
chr3_4	exon	61403702	61403754	61403702	ID=Msa0511760-mRNA-1:exon:15004;Parent=Msa0511760-mRNA-1
chr3_4	five_prime_UTR	61403706	61403754	61403706	ID=Msa0511760-mRNA-1:five_prime_utr;Parent=Msa0511760-mRNA-1
chr3_4	CDS	61403702	61403705	61403702	ID=Msa0511760-mRNA-1:cds;Parent=Msa0511760-mRNA-1
chr3_4	CDS	61403438	61403604	61403438	ID=Msa0511760-mRNA-1:cds;Parent=Msa0511760-mRNA-1
chr3_4	CDS	61402390	61402587	61402390	ID=Msa0511760-mRNA-1:cds;Parent=Msa0511760-mRNA-1
chr3_4	CDS	61402052	61402297	61402052	ID=Msa0511760-mRNA-1:cds;Parent=Msa0511760-mRNA-1
chr3_4	three_prime_UTR	61401727	61402051	61401727	ID=Msa0511760-mRNA-1:three_prime_utr;Parent=Msa0511760-mRNA-1
chr3_4	three_prime_UTR	61401580	61401671	61401580	ID=Msa0511760-mRNA-1:three_prime_utr;Parent=Msa0511760-mRNA-1

Gene Sequence

>Msa0511760

ATGGGTGCCTACAAGTATGTTTCTGAGCTATGGCGCAAGAAGCAATCTGATGTGATGCGATTCATGCAACGTGTGAGGTGCTGGGAGTATCGTCAGCAATCCTCTATCGTTCGTCTCACCAGACCCACTCGTCCTGACAAGGCTCGCCGTTTGGGTTACAAGGCTAAGCAGGGATATGTCGTGTACCGGGTGAGGGTACGCAGAGGTGGTAGGAAGAGGCCAGTTTCCAAGGGTATTGTTTATGGTAAGCCCACCAACCAGGGAGTTACCCAACTCAAGTTTCAAAGGAGCAAGAGGTCCGTCGCTGAAGAGCGTGCTGGACGGAAGCTTGGTGGTCTTAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCTACCTTCAAATATTTCGAGGTCATTTTGGTTGATGTTGCTCACAGTGCTATAAGAAATGACCCAAGAATCAACTGGCTCACCAACCCAGTCCACAAGCACAGGGAACTTCGTGGTCTCACTTCTGCTGGAAAAGAAAACAGAGGTTTGAGTGGCAAGGGTCACCGTTACCACAAAGCCCGTCCATCCCGCAGGGCAAACTGGAAGAGAAACAACACCCTGTCTCTCCGCCGTTACCGTTGA

Protein sequence

>Msa0511760

MGAYKYVSELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVILVDVAHSAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTLSLRRYR*